RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCBLD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164465

Ensembl transcript IDs: ENST00000296955.12, ENST00000338728.10, ENST00000424717.6, ENST00000481630.1, ENST00000525483.5, ENST00000528138.5, ENST00000528162.1, ENST00000533453.5, ENST00000533950.1, ENST00000534777.5

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGATACACACGCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTaGCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCTTTC +
Preference number: 1 (lower is better)
Translates to: PIHTHTLDQQAPFFQ*LVTARRSVPQQASF
Trigger: GAAAGAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGTGTATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR CCA 90 bp ATGGTCACCGGAGCTGGGCCGACCTCTTCGCATCCCCCTCTGAAGTaGAGACTAAGGAAACGGGCAGCTGCTGAGGTGTTGTTTCTTTGC +
Preference number: 1 (lower is better)
Translates to: MVTGAGPTSSHPPLK*RLRKRAAAEVLFLC
Trigger: GCAAAGAAACAACACCTCAGCAGCTGCCCGTTTCCTTAGTCTCCACTTCAGAGGGGGATGCGAAGAGGTCGGCCCAGCTCCGGTGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR TCA 90 bp ACACGCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTaGCAGCCCGACGCTCAGTACCACAGCAGGCTTCTTTCACATTGT +
Preference number: 1 (lower is better)
Translates to: TRTLWTSRLPSSSAL*QPDAQYHSRLLSHC
Trigger: ACAATGTGAAAGAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR TCA 90 bp GCGTCTGACCTCAGCAATATTTTTAATCTGAGGTACGAAAACATCTaGCACAGCCATTCACACTGTAATTCCTGTGCCACCTTCATGGTC +
Preference number: 1 (lower is better)
Translates to: ASDLSNIFNLRYENI*HSHSHCNSCATFMV
Trigger: GACCATGAAGGTGGCACAGGAATTACAGTGTGAATGGCTGTGTCAGATGTTTTCGTACCTCAGATTAAAAATATTGCTGAGGTCAGACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR CCA 90 bp GCACAATTTTGTAAACAGTATGACAGGTTGTCTCTAGGATCCTACTaGATCACACACACACATGCAAGTGTACACACACACCGATACACA +
Preference number: 1 (lower is better)
Translates to: AQFCKQYDRLSLGSY*ITHTHASVHTHRYT
Trigger: TGTGTATCGGTGTGTGTGTACACTTGCATGTGTGTGTGTGATCCAGTAGGATCCTAGAGACAACCTGTCATACTGTTTACAAAATTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCATCTTCCAGTGCCTTGTaGCAGCCCGACGCTCAGTAC +
Preference number: 2 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSSSSAL*QPDAQY
Trigger: GTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGA...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR CCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACATACACACGCACACTCTaGACCAGCAGGCTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: GNDSITTRLGLSRPAANTYTRTL*TSRLPS
Trigger: AGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGTGTA...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR GCA 90 bp ATTTACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTATAGATGCGGAGGGCTaGACGTTGGGGATGCTATTT +
Preference number: 2 (lower is better)
Translates to: IYCPLLLLGWERTWCSNPIDAEG*TLGMLF
Trigger: AAATAGCATCCCCAACGTGCAGCCCTCCGCATCTAT...AGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
3UTR CAA 90 bp GTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGTATGACAGGTaGTCTCTAGGATCCTACTGGATCACACACACACATGCAAGTGTA +
Preference number: 2 (lower is better)
Translates to: VSTKPAAQFCKQYDR*SLGSYWITHTHASV
Trigger: TACACTTGCATGTGTGTGTGTGATCCAGTAGGATCCTAGAGACAACCTGTCATACTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR GCA 90 bp GTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGGAGCTGCACGTTGGGGATaGTATTTTGGCAGTCAACGG +
Preference number: 2 (lower is better)
Translates to: VPYKEYFNLLPFVVVRVGAARWG*YFGSQR
Trigger: CCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGC...TCCCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
3UTR-3UTR CCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAATGTCTGGACTGTTCTaGAATTACAGACGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSMSGLF*NYRRLL
Trigger: AAGGAGGCGTCTGTAATTCCAGAACAGTCCAGACAT...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR CCA 90 bp GCTGATCCATACGGACTTCCTTTCTTCTTCTTCTTTCTAAAGGCTGCAAAGATCAACAAGGAGCACCAATaGAATAGCCACCGTTGTAAT +
Preference number: 2 (lower is better)
Translates to: ADPYGLPFFFFFLKAAKINKEHQ*NSHRCN
Trigger: ATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTT...GATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424717.6
3UTR GCA 72 bp ACGCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTaGCTTGTGACAGCCCGACGCTCAGTACCACAGCAG +
Preference number: 3 (lower is better)
Translates to: THTLDQQAPFFQ*LVTARRSVPQQ
Trigger: CTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR CCA 72 bp ACAGCCATTCACACTGTAATTCCTGTGCCACCTTCATaGTCACCGGAGCTGGGCCGACCTCTTCGCATCCCC +
Preference number: 3 (lower is better)
Translates to: TAIHTVIPVPPS*SPELGRPLRIP
Trigger: GGGGATGCGAAGAGGTCGGCCCAGCTCCGGTGACCATGAAGGTGGCACAGGAATTACAGTGTGAATGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR CAA 90 bp GTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGCGGAGGGCTGCACGTaGGGGATGCTATTTTGGCAG +
Preference number: 3 (lower is better)
Translates to: VRVGKNMVFQSSSLRSIRAEGCT*GMLFWQ
Trigger: CTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGC...CCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
3UTR GCA 72 bp GTTGTCTCTAGGATCCTACTGGATCACACACACACATaGAAGTGTACACACACACCGATACACACGCACACT +
Preference number: 3 (lower is better)
Translates to: VVSRILLDHTHT*KCTHTPIHTHT
Trigger: AGTGTGCGTGTGTATCGGTGTGTGTGTACACTTGCATGTGTGTGTGTGATCCAGTAGGATCCTAGAGACAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR CCA 72 bp ACTGAGCATGAGGTACAGCTGATGTCTGGACTGTTCTaGAATTACAGACGCCTCCTTGAGGGGAAAATCATT +
Preference number: 3 (lower is better)
Translates to: TEHEVQLMSGLF*NYRRLLEGKII
Trigger: AATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGACATCAGCTGTACCTCATGCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR GCA 72 bp ATACGGACTTCCTTTCTTCTTCTTCTTTCTAAAGGCTaGAAAGATCCCCATTCCAGCAAACACCAGGACAAC +
Preference number: 3 (lower is better)
Translates to: IRTSFLLLLSKG*KDPHSSKHQDN
Trigger: GTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424717.6
3UTR CCA 72 bp TGTAAACAGTATGACAGGTTGTCTCTAGGATCCTACTaGATCACACACACACATGCAAGTGTACACACACAC +
Preference number: 3 (lower is better)
Translates to: CKQYDRLSLGSY*ITHTHASVHTH
Trigger: GTGTGTGTGTACACTTGCATGTGTGTGTGTGATCCAGTAGGATCCTAGAGACAACCTGTCATACTGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR CAA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAAAACAGTATGACAGGTaGTCTCTAGGATCCTACTGG +
Preference number: 3 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSKQYDR*SLGSYW
Trigger: CCAGTAGGATCCTAGAGACAACCTGTCATACTGTTT...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR TCA 72 bp CTCAGCAATATTTTTAATCTGAGGTACGAAAACATCTaGCACAGCCATTCACACTGTAATTCCTGTGCCACC +
Preference number: 3 (lower is better)
Translates to: LSNIFNLRYENI*HSHSHCNSCAT
Trigger: GGTGGCACAGGAATTACAGTGTGAATGGCTGTGTCAGATGTTTTCGTACCTCAGATTAAAAATATTGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR-3UTR CAA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATATGTTCCAAATAACTTaGTTTTTCAGAGGACAGCGG +
Preference number: 3 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYMFQIT*FFRGQR
Trigger: CCGCTGTCCTCTGAAAAACAAAGTTATTTGGAACAT...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR TCA 72 bp AAATTGTGGCGTCTGACCTCAGCAATATTTTTAATCTaGGGTACGAAAACATCTGACACAGCCATTCACACT +
Preference number: 3 (lower is better)
Translates to: KLWRLTSAIFLI*GTKTSDTAIHT
Trigger: AGTGTGAATGGCTGTGTCAGATGTTTTCGTACCTCAGATTAAAAATATTGCTGAGGTCAGACGCCACAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR TCA 72 bp CTCCTTCTCATTATCATAGCTGATGGTAAACTCAGCTaGCTGATGTCTGGCAAAGGGATATTTAATCTGCTT +
Preference number: 3 (lower is better)
Translates to: LLLIIIADGKLS*LMSGKGIFNLL
Trigger: AAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424717.6
3UTR-3UTR CAA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCAAGCTCGATTTAGACTaGGTCAGAATCACTTTTGCA +
Preference number: 3 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLKLDLD*VRITFA
Trigger: TGCAAAAGTGATTCTGACCAAGTCTAAATCGAGCTT...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCGGTGGCGAGGGCGCTaGCAGCTTTGGGCCGGTCGT +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTRWRGR*QLWAGR
Trigger: ACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCG...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGTGGGCGCGCAGCACGTaGCGCTCCACGATGGGCGTG +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTWARST*RSTMGV
Trigger: CACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCA...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGGCTCCACGATGGGCGTaGCGTACTCGGGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQAPRWA*RTRAPG
Trigger: CCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGC...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCGTGCCGCTCCACGATaGGCGTGGCGTACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTRAAPR*AWRTRA
Trigger: AGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACG...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGTGCGTTGGGGGCTTCTaGGAGTCAGGGTGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQCVGGF*ESGCPL
Trigger: AAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCA...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGACGCTGGGCGCCAGCTTaGCAAGCTCGGCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGRWAPA*QARPPL
Trigger: GAGGGGAGGCCGAGCTTGCCAAGCTGGCGCCCAGCG...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTGATCCCTTTGCGCTaGAGCACACTGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTLIPLR*STLIWP
Trigger: TGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAG...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCGCTCCCTTCTTCCAGTaGCTTGTGACAGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFAPFFQ*LVTARR
Trigger: GCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGC...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp AGATCCATCCGGGGCAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCCCCGGCCAGAAATGTaGGATCCACTCTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: RSIRGNLLIDAEGCTLGMPRPEM*DPLSKR
Trigger: CCGCTTTGAGAGTGGATCCCACATTTCTGGCCGGGG...CATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCTGGTGCCATGTCTaGGGGACAACCCGCACATAT +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTLWCHV*GTTRTY
Trigger: ATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAG...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGAGTCGCCCGAAGCCCATaGTGGGCCTTGGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGVARSP*WALVLK
Trigger: CTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGAC...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCTCTTCCAGTGCCTTGTaGCAGCCCGACGCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFSSSAL*QPDAQY
Trigger: GTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGA...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGGTGGTTTGTGGTTGTTaGTACTGTCGCCCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQVVCGC*YCRPKP
Trigger: GGGCTTCGGGCGACAGTAGCAACAACCACAAACCAC...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGAACCAGCAGCTAGTCTaGCATGACCTTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQNQQLV*HDLPAP
Trigger: GGGTGCTGGAAGGTCATGGCAGACTAGCTGCTGGTT...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp AGATCCATCCGGGGCAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTCTGGTGCCATGTCTaGGGGACAACCCGCACATAT +
Preference number: 4 (lower is better)
Translates to: RSIRGNLLIDAEGCTLGMLWCHV*GTTRTY
Trigger: ATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAG...CATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGAAATCGCTTGTCTaGCAGGGAACCATCCCTCGA +
Preference number: 4 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQQKSLV*QGTIPR
Trigger: TCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTG...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCAGGCTGTGCGCTGTGTaGCCTTTGATAGTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFRLCAV*PLIVSV
Trigger: GACGGAGACTATCAAAGGCCACACAGCGCACAGCCT...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGAATCTGGATGGTCGCTaGTCGCATAGGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTNLDGR*SHRSAK
Trigger: TTTTGCTGACCTATGCGAGCAGCGACCATCCAGATT...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGGAAGAAGCTCTGATTTaGCCGTCAGGTTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTEEALI*PSGSKL
Trigger: GAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTC...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCCTCTCATTGACCGACTaGCATGAGGAAGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFLSLTD*HEEEAL
Trigger: CAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAG...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAAGGCTATCCTCTGGTaGCATGTCTGGGGGACAACC +
Preference number: 4 (lower is better)
Translates to: QPADRCGGLHVGDAILAVKAILW*HVWGTT
Trigger: GGTTGTCCCCCAGACATGGCACCAGAGGATAGCCTT...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp AGATCCATCCGGGGCAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGGGGTGGGAAAGAACATaGTGTTCCAATCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: RSIRGNLLIDAEGCTLGMGWERT*CSNPHL
Trigger: GAGATGAGGATTGGAACACCATGTTCTTTCCCACCC...CATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp GCACACTCTGGACCAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGTCTCTAGGATCCTACTaGATCACACACACACATGCA +
Preference number: 4 (lower is better)
Translates to: AHSGPAGSLLPVPCDSPTSLGSY*ITHTHA
Trigger: TGCATGTGTGTGTGTGATCCAGTAGGATCCTAGAGA...CGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGACAGAAATCGCTTGTCTaGCAGGGAACCATCCCTCGA +
Preference number: 4 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGQKSLV*QGTIPR
Trigger: TCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTG...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCTTTCTGAGCCTCTGCTaGTCCATACGGACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFFLSLC*SIRTSF
Trigger: AAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAA...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp GGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGCAACCTGCTGATAGATaGGGAGGGCTGCACGTTGGG +
Preference number: 4 (lower is better)
Translates to: GKNMVFQSSSLRSIRGNLQPADR*GGLHVG
Trigger: CCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG...CAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAGGCCGCCGGCATCGGTaGTCACCCCTGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSGRRHR*SPLPPR
Trigger: CCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCC...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGTGGAGCCCTTCCTCGTaGCTGTCCCGGTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQWSPSS*LSRCQS
Trigger: TGATTGGCACCGGGACAGTCACGAGGAAGGGCTCCA...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCATGGATGGCAGCTTTaGACAATAAAGAGGTATCTC +
Preference number: 4 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQHGWQL*TIKRYL
Trigger: GAGATACCTCTTTATTGTGCAAAGCTGCCATCCATG...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGACTCTCATTGACCGACTaGCATGAGGAAGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGLSLTD*HEEEAL
Trigger: CAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAG...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp GTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACGTGGTTTGTGGTTGTTaGTACTGTCGCCCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VGKNMVFQSSSLRSIRGNVVCGC*YCRPKP
Trigger: GGGCTTCGGGCGACAGTAGCAACAACCACAAACCAC...GTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACACGCTGGGCGCCAGCTTaGCAAGCTCGGCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTRWAPA*QARPPL
Trigger: GAGGGGAGGCCGAGCTTGCCAAGCTGGCGCCCAGCG...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGCGCAAACAGTGTGATTaGGGTAGGTCCCGGGATAAT +
Preference number: 4 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTRKQCD*GRSRDN
Trigger: ATTATCCCGGGACCTACCCCAATCACACTGTTTGCG...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGAACAAGGAGCACCAATaGAATAGCCACCGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQNKEHQ*NSHRCN
Trigger: ATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTT...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATGAGAGGGAGTGTTTGTaGCCGGGCTGGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYERECL*PGWGPG
Trigger: CCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTC...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGGCAGTCATGGCCGTCTaGTTGAGGGGTGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQAVMAV*LRGVRQ
Trigger: CTGCCTCACACCCCTCAACCAGACGGCCATGACTGC...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCATGTCTGGACTGTTCTaGAATTACAGACGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFMSGLF*NYRRLL
Trigger: AAGGAGGCGTCTGTAATTCCAGAACAGTCCAGACAT...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGAATTGACCGACTGCCATaGGGAAGAAGCTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGIDRLP*GRSSDL
Trigger: CAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAAT...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCATCAGCAATTATTCCTaGATGGATGGCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFISNYS*MDGSFA
Trigger: TGCAAAGCTGCCATCCATGCAGGAATAATTGCTGAT...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGCCTGTCCGCAGGCTGTaGGCTGTGTGGCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQPVRRL*AVWPLI
Trigger: TATCAAAGGCCACACAGCGCACAGCCTGCGGACAGG...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATCGGCATCCGTGTCCATaGGCCGGAAGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYRHPCP*AGRWSP
Trigger: AGGGCTCCACCTTCCGGCCCATGGACACGGATGCCG...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACATGCGCAGAGAACGTGTaGGCGCGCAGCACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTCAENV*ARSTCR
Trigger: GCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCA...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCTGGACCATATTGATCTaGAGAGCTGGTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QPADRCGGLHVGDAILAVWTILI*RAGEEK
Trigger: CTTCTCTTCACCAGCTCTTCAGATCAATATGGTCCA...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp GTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGTGCGCTGAAGCACACTaGTCTGGCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VRVGKNMVFQSSSLRSIRCAEAH*SGHLVH
Trigger: ATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCA...CCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp GTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACTCCCTTCATATCGACTaGTCCCTTTGCGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VGKNMVFQSSSLRSIRGNSLHID*SLCAEA
Trigger: TGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGA...GTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGAGATGGGCCTTGGTCCTaGAGTCGGGCTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRDGPWS*SRAWPG
Trigger: TCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATC...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp GGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGGATGGTAAACTCAGCTaGCTGATGTCTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GKNMVFQSSSLRSIRGNLDGKLS*LMSGKG
Trigger: CCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATC...CAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCTTACCTTGTGTAATCTaGCAACCAATGAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: QPADRCGGLHVGDAILAVLPCVI*QPMSST
Trigger: GGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAA...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATCCTGTGCCACCTTCATaGTCACCGGAGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYPVPPS*SPELGR
Trigger: TCGGCCCAGCTCCGGTGACCATGAAGGTGGCACAGG...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAGATGGGCCTTGGTCCTaGAGTCGGGCTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSDGPWS*SRAWPG
Trigger: TCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATC...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCGTCGCCCGAAGCCCATaGTGGGCCTTGGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ITPLTPKQLNISQRNENAVARSP*WALVLK
Trigger: CTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGAC...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGCTTGCGCCACACCAATaGATCATTACCTTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTLAPHQ*IITLCN
Trigger: ATTACACAAGGTAATGATTCATTGGTGTGGCGCAAG...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp GGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGCAACAGTCTGTTTTCTaGGCCTCTGCTGATCCATAC +
Preference number: 4 (lower is better)
Translates to: GKNMVFQSSSLRSIRGNLQQSVF*ASADPY
Trigger: GTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTG...CAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCCATGGATGGCAGCTTTaGACAATAAAGAGGTATCTC +
Preference number: 4 (lower is better)
Translates to: QPADRCGGLHVGDAILAVHGWQL*TIKRYL
Trigger: GAGATACCTCTTTATTGTGCAAAGCTGCCATCCATG...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGAATCAGCAATTATTCCTaGATGGATGGCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGISNYS*MDGSFA
Trigger: TGCAAAGCTGCCATCCATGCAGGAATAATTGCTGAT...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGGGATGAAATTGTTTTaGACTGGGTCCCGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTGMKLF*TGSRKL
Trigger: TAACTTTCGGGACCCAGTGCAAAACAATTTCATCCC...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAATCGGTGCTCACCCCTaGCTCCTCGGCATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSIGAHP*LLGIRV
Trigger: GACACGGATGCCGAGGAGGCAGGGGTGAGCACCGAT...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGCTCCAGCCACTCTCGTaGTTTGTGGTTGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: VRVGKNMVFQSSSLRSIRLQPLS*FVVVAT
Trigger: AGTAGCAACAACCACAAACCACGAGAGTGGCTGGAG...CCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGATTGTTGTTGTTAGGGTaGGAAAGAACATGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGLLLLG*ERTWCS
Trigger: GGAACACCATGTTCTTTCCCACCCTAACAACAACAA...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACACATGGTCACCGGAGCTaGGCCGACCTCTTCGCATCC +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTHGHRS*ADLFAS
Trigger: GGATGCGAAGAGGTCGGCCCAGCTCCGGTGACCATG...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGTCCCTTCATATCGACTaGTCCCTTTGCGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQSLHID*SLCAEA
Trigger: TGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGA...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATGCAGCTAGTCTGCCATaGCCTTCCAGCACCCCCATT +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYAASLP*PSSTPI
Trigger: AATGGGGGTGCTGGAAGGTCATGGCAGACTAGCTGC...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp AAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGCTAATCTGGATGGTCGCTaGTCGCATAGGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: KEHGVPILISEIHPGQPANLDGR*SHRSAK
Trigger: TTTTGCTGACCTATGCGAGCAGCGACCATCCAGATT...AGCAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCCAGCTGGGCAGAATTTaGTGTATTCTGTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: QPADRCGGLHVGDAILAVQLGRI*CILSSN
Trigger: ATTTGAAGACAGAATACAGCAAATTCTGCCCAGCTG...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGTTATTCCTGCATGGATaGCAGCTTTGCACAATAAAG +
Preference number: 4 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTLFLHG*QLCTIK
Trigger: CTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAA...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGCTCCAGCCACTCTCGTaGTTTGTGGTTGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQLQPLS*FVVVAT
Trigger: AGTAGCAACAACCACAAACCACGAGAGTGGCTGGAG...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGTTGGGGATGCTATTTTaGCAGTCAACGGAGTTAACC +
Preference number: 4 (lower is better)
Translates to: GKNMVFQSSSLRSIRGNLLGMLF*QSTELT
Trigger: GGTTAACTCCGTTGACTGCCAAAATAGCATCCCCAA...CAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGACTGATCCCTTTGCGCTaGAGCACACTGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRLIPLR*STLIWP
Trigger: TGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAG...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATGGCCAGGAGACCAGTaGACTTGGTCTCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRWPGDQ*TWSPLS
Trigger: TGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCA...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCTCCCGGTGCCAATCATaGGGGGCTGCTGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: ITPLTPKQLNISQRNENASRCQS*GAAGNL
Trigger: CAGATTACCAGCAGCCCCTCATGATTGGCACCGGGA...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATAAGGCTATCCTCTGGTaGCATGTCTGGGGGACAACC +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYKAILW*HVWGTT
Trigger: GGTTGTCCCCCAGACATGGCACCAGAGGATAGCCTT...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAAAACAAGGAGCACCAATaGAATAGCCACCGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: GGKEHGVPILISEIHPGQNKEHQ*NSHRCN
Trigger: ATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTT...TTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGACGGAGGGCTGCACGTTaGGGATGCTATTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRRRAAR*GCYFGS
Trigger: ACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCG...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCATGGCCAGGAGACCAGTaGACTTGGTCTCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSWPGDQ*TWSPLS
Trigger: TGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCA...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp TCCAACAGTCTGTTTTCTGAGCCTCTGCTGATCCATACGGACTTCCTTTCTTCTTTTCTGAGCCTCTGCTaGTCCATACGGACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SNSLFSEPLLIHTDFLSSFLSLC*SIRTSF
Trigger: AAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAA...AGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR CCA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCCCCCGGCCAGAAATGTaGGATCCACTCTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLPRPEM*DPLSKR
Trigger: CCGCTTTGAGAGTGGATCCCACATTTCTGGCCGGGG...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp ATTTACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCACTCTCGTGGTTTGTaGTTGTTGCTACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: IYCPLLLLGWERTWCSNPHSRGL*LLLLSP
Trigger: GGGCGACAGTAGCAACAACCACAAACCACGAGAGTG...AGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATCACTCTCGTGGTTTGTaGTTGTTGCTACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYHSRGL*LLLLSP
Trigger: GGGCGACAGTAGCAACAACCACAAACCACGAGAGTG...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGGAAATTGTTTTGCACTaGGTCCCGAAAGTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: GKNMVFQSSSLRSIRGNLEIVLH*VPKVRV
Trigger: AACTCTAACTTTCGGGACCCAGTGCAAAACAATTTC...CAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGTTACCTTGTGTAATCTaGCAACCAATGAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQLPCVI*QPMSST
Trigger: GGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAA...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp CCAGCAAACACCAGGACAACAAGGAGCACCAATGGAATAGCCACCGTTGTAATGAACAAGGAGCACCAATaGAATAGCCACCGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: PANTRTTRSTNGIATVVMNKEHQ*NSHRCN
Trigger: ATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTT...CATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR TCA 90 bp TACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATATGAGGAAGAAGCTCTaGTTTGCCCGTCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: YCPLLLLGWERTWCSNPHMRKKL*FARQVQ
Trigger: TTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCAT...ATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGGGTCTCCACTCTCATTaGCCGACTGCCATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWGLHSH*PTAMRK
Trigger: CTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACC...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCGGTCTCCACTCTCATTaGCCGACTGCCATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLGLHSH*PTAMRK
Trigger: CTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACC...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp ATTTACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCCACGATGGGAGGGATaGAATTGTTTTGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: IYCPLLLLGWERTWCSNPPRWEG*NCFALG
Trigger: ACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGG...AGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp GGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAAATCTTCTTTCTTAGTTaGAACACTGGTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: GGKEHGVPILISEIHPGQIFFLS*NTGALT
Trigger: AGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGAT...TTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp TCCAACAGTCTGTTTTCTGAGCCTCTGCTGATCCATACGGACTTCCTTTCTTCTGTAAACTCAGCTGACTaGTGTCTGGCAAAGGGATAT +
Preference number: 4 (lower is better)
Translates to: SNSLFSEPLLIHTDFLSSVNSAD*CLAKGY
Trigger: ATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTAC...AGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR TCA 90 bp TCTGCTGATCCATACGGACTTCCTTTCTTCTTCTTCTTTCTAAAGGCTGCAAAGGATGGTAAACTCAGCTaGCTGATGTCTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SADPYGLPFFFFFLKAAKDGKLS*LMSGKG
Trigger: CCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATC...CTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR TCA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGTCCAATCCTCATCTCTaGGATCCATCCGGGGCAACC +
Preference number: 4 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWSNPHL*DPSGAT
Trigger: GGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGA...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATGAAACGGGCAGCTGCTaGGGTGTTGTTTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYETGSC*GVVSLL
Trigger: AAGCAAAGAAACAACACCTCAGCAGCTGCCCGTTTC...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp AAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGCTTCAACAAGAGTTCTTTaGGAACAGTCATACTTCCAC +
Preference number: 4 (lower is better)
Translates to: KEHGVPILISEIHPGQPASTRVL*EQSYFH
Trigger: GTGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGA...AGCAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCTACACACGCACACTCTaGACCAGCAGGCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLYTRTL*TSRLPS
Trigger: AGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGTGTA...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCCATCCCCCTCTGAAGTaGAGACTAAGGAAACGGGCA +
Preference number: 4 (lower is better)
Translates to: ITPLTPKQLNISQRNENAHPPLK*RLRKRA
Trigger: TGCCCGTTTCCTTAGTCTCCACTTCAGAGGGGGATG...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACACCACGATGGGAGGGATaGAATTGTTTTGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTPRWEG*NCFALG
Trigger: ACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGG...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATCAACAGTCTGTTTTCTaGGCCTCTGCTGATCCATAC +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYQQSVF*ASADPY
Trigger: GTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTG...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GCTGATCCATACGGACTTCCTTTCTTCTTCTTCTTTCTAAAGGCTGCAAAGATCCAACAGTCTGTTTTCTaGGCCTCTGCTGATCCATAC +
Preference number: 4 (lower is better)
Translates to: ADPYGLPFFFFFLKAAKIQQSVF*ASADPY
Trigger: GTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTG...GATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR TCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACAGATGGTAAACTCAGCTaGCTGATGTCTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTDGKLS*LMSGKG
Trigger: CCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATC...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACAAGCATGAGGTACAGCTaGTGTCTGGACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTSMRYS*CLDCSG
Trigger: TCCAGAACAGTCCAGACATCAGCTGTACCTCATGCT...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGCAGCTGGGCAGAATTTaGTGTATTCTGTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQQLGRI*CILSSN
Trigger: ATTTGAAGACAGAATACAGCAAATTCTGCCCAGCTG...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACACGCAAACAGTGTGATTaGGGTAGGTCCCGGGATAAT +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTRKQCD*GRSRDN
Trigger: ATTATCCCGGGACCTACCCCAATCACACTGTTTGCG...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACAATTGACCGACTGCCATaGGGAAGAAGCTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: GNDSITTRLGLSRPAANTIDRLP*GRSSDL
Trigger: CAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAAT...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp ATTTACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTGTAAACTCAGCTGACTaGTGTCTGGCAAAGGGATAT +
Preference number: 4 (lower is better)
Translates to: IYCPLLLLGWERTWCSNPVNSAD*CLAKGY
Trigger: ATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTAC...AGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGCCCAGAAATGTCTCCTaGTACGTCTCTACAACCAGC +
Preference number: 4 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWPRNVS*YVSTTS
Trigger: GCTGGTTGTAGAGACGTAGCAGGAGACATTTCTGGG...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR GCA 90 bp ATTTACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTGAAGAAGCTCTGATTTaGCCGTCAGGTTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: IYCPLLLLGWERTWCSNPEEALI*PSGSKL
Trigger: GAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTC...AGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp TACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATTCGAAAGAACACCATTaGCCAGAATCCCTTCATATC +
Preference number: 4 (lower is better)
Translates to: YCPLLLLGWERTWCSNPHSKEHH*PESLHI
Trigger: GATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGA...ATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCATGGACCATATTGATCTaGAGAGCTGGTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSWTILI*RAGEEK
Trigger: CTTCTCTTCACCAGCTCTTCAGATCAATATGGTCCA...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAGTATGGACCATATTaGTCTGAAGAGCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSQYGPY*SEELVK
Trigger: CTTCACCAGCTCTTCAGATCAATATGGTCCATACTG...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCATGAGGAAGAAGCTCTaGTTTGCCCGTCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLMRKKL*FARQVQ
Trigger: TTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCAT...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGTTTCTGAGCCTCTGCTaGTCCATACGGACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWFLSLC*SIRTSF
Trigger: AAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAA...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAGTAAACTCAGCTGACTaGTGTCTGGCAAAGGGATAT +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSVNSAD*CLAKGY
Trigger: ATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTAC...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATTTACAGACGCCTCCTTaGGGGGAAAATCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYLQTPP*GENHFL
Trigger: TAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAA...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp TCTGCTGATCCATACGGACTTCCTTTCTTCTTCTTCTTTCTAAAGGCTGCAAAGCTTGCGCCACACCAATaGATCATTACCTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SADPYGLPFFFFFLKAAKLAPHQ*IITFSS
Trigger: TGAAGAAAAGGTAATGATTCATTGGTGTGGCGCAAG...CTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR CCA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCAGAAGCACAGGTCTaGGATTCGATATCCAAATCT +
Preference number: 4 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRSEAQV*DSISKS
Trigger: AGATTTGGATATCGAATCCCAGACCTGTGCTTCTGA...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp GTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGGACAGTATGGACCATATTaGTCTGAAGAGCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VPYKEYFNLLPFVVVRVGQYGPY*SEELVK
Trigger: CTTCACCAGCTCTTCAGATCAATATGGTCCATACTG...TCCCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACTTGCGCCACACCAATaGATCATTACCTTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSLAPHQ*IITLCN
Trigger: ATTACACAAGGTAATGATTCATTGGTGTGGCGCAAG...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCAGGTACGAAAACATCTaGCACAGCCATTCACACTGT +
Preference number: 4 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLRYENI*HSHSHC
Trigger: ACAGTGTGAATGGCTGTGTCAGATGTTTTCGTACCT...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR GCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAGGGATGAAATTGTTTTaGACTGGGTCCCGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSGMKLF*TGSRKL
Trigger: TAACTTTCGGGACCCAGTGCAAAACAATTTCATCCC...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCTCGAAAGAACACCATTaGCCAGAATCCCTTCATATC +
Preference number: 4 (lower is better)
Translates to: ITPLTPKQLNISQRNENASKEHH*PESLHI
Trigger: GATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGA...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp TCTGGACTGTTCTGGAATTACAGACGCCTCCTTGAGGGGAAAATCATTTCTTATGAAATTGTTTTGCACTaGGTCCCGAAAGTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: SGLFWNYRRLLEGKIISYEIVLH*VPKVRV
Trigger: AACTCTAACTTTCGGGACCCAGTGCAAAACAATTTC...ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp GCTGATCCATACGGACTTCCTTTCTTCTTCTTCTTTCTAAAGGCTGCAAAGATCATCTTCTTTCTTAGTTaGAACACTGGTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: ADPYGLPFFFFFLKAAKIIFFLS*NTGALT
Trigger: AGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGAT...GATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR GCA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGTCAACGGAGTTAACCTaGCATATCACTTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWSTELT*HITCDE
Trigger: CTCATCACAAGTGATATGGCAGGTTAACTCCGTTGA...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCATCAACAAGAGTTCTTTaGGAACAGTCATACTTCCAC +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSSTRVL*EQSYFH
Trigger: GTGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGA...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR TCA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAATCTTCTTTCTTAGTTaGAACACTGGTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSIFFLS*NTGALT
Trigger: AGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGAT...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CCA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCTTATTCCTGCATGGATaGCAGCTTTGCACAATAAAG +
Preference number: 4 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLLFLHG*QLCTIK
Trigger: CTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAA...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
3UTR CAA 72 bp TACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTaGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: YLTKSTLIYCPL*LLGWERTWCSN
Trigger: ATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS GCA 90 bp GGCGGCCGGCCCGCTGCGGGCAGTCATAGTGGCCGCCGGCATCGGTaGTCACCCCTGCCTCCTCGGCATCCGTGTCCATGGGCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: GGRPAAGSHSGRRHR*SPLPPRHPCPWAGR
Trigger: CCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCGGGCCGGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 90 bp TCTGCGCAGAGAACGTGTGGGCGCGCAGCACGTGCCGCTCCACGATaGGCGTGGCGTACTCGGGCTCCGGGGGCGCCAGGGGCAGCGCGT +
Preference number: 5 (lower is better)
Translates to: SAQRTCGRAARAAPR*AWRTRAPGAPGAAR
Trigger: ACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 90 bp CAGAGAACGTGTGGGCGCGCAGCACGTGCCGCTCCACGATGGGCGTaGCGTACTCGGGCTCCGGGGGCGCCAGGGGCAGCGCGTACTCGT +
Preference number: 5 (lower is better)
Translates to: QRTCGRAARAAPRWA*RTRAPGAPGAARTR
Trigger: ACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 90 bp GAAGCCGCCCGAGGAGAGGGAGTGTTTGTGGCCGGGCTGGGGCCCTaGGACGCGGTAGCCGCTCTGCGCAGAGAACGTGTGGGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: EAARGEGVFVAGLGP*DAVAALRRERVGAQ
Trigger: CTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCGGGCGGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS TCA 90 bp GGGGCTTCTGAGAGTCAGGGTGCCCGCTTTCGGTGGCGAGGGCGCTaGCAGCTTTGGGCCGGTCGTAGCCCCTGTCCGCAGGCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: GASESQGARFRWRGR*QLWAGRSPCPQAVR
Trigger: GCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 90 bp CCGCTGCGGGCAGTCATAGTGGCCGCCGGCATCGGTGCTCACCCCTaGCTCCTCGGCATCCGTGTCCATGGGCCGGAAGGTGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: PLRAVIVAAGIGAHP*LLGIRVHGPEGGAL
Trigger: AAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 90 bp GGCGCTGACAGCTTTGGGCCGGTCGTAGCCCCTGTCCGCAGGCTGTaGGCTGTGTGGCCTTTGATAGTCTCCGTCCTGGGCGCCCACACC +
Preference number: 5 (lower is better)
Translates to: GADSFGPVVAPVRRL*AVWPLIVSVLGAHT
Trigger: GGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 90 bp AGCTTTGGGCCGGTCGTAGCCCCTGTCCGCAGGCTGTGCGCTGTGTaGCCTTTGATAGTCTCCGTCCTGGGCGCCCACACCCGCTACGGG +
Preference number: 5 (lower is better)
Translates to: SFGPVVAPVRRLCAV*PLIVSVLGAHTRYG
Trigger: CCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 90 bp GCAGTCTCTGGGGGCAGAATAGCTGTCACTCGTCCCGGGATGCGTTaGGGGCTTCTGAGAGTCAGGGTGCCCGCTTTCGGTGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: AVSGGRIAVTRPGMR*GLLRVRVPAFGGEG
Trigger: GCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGAGACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp GGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGCCGCTGGGCGCCAGCTaGGCAAGCTCGGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GKNMVFQSSSLRSIRGNLPLGAS*ASSASP
Trigger: AGGGGAGGCCGAGCTTGCCAAGCTGGCGCCCAGCGG...CAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGTGCGCTGTGTGGCCTTaGATAGTCTCCGTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQCAVWP*IVSVLG
Trigger: GCCCAGGACGGAGACTATCAAAGGCCACACAGCGCA...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCTCGTCCCGGGATGCGTaGGGGGCTTCTGAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFSSRDA*GASESQ
Trigger: CTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGA...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS TCA 90 bp CCACTCTCGTGGTTTGTGGTTGTTGCTACTGTCGCCCGAAGCCCATaGTGGGCCTTGGTCCTGAAGTCGGGCTTGGCCAGGAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: PLSWFVVVATVARSP*WALVLKSGLARRPV
Trigger: CACTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS-3UTR CAA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCGTGGTTTGTGGTTGTaGCTACTGTCGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQRGLWL*LLSPEA
Trigger: GGCTTCGGGCGACAGTAGCAACAACCACAAACCACG...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGCCGCTGGGCGCCAGCTaGGCAAGCTCGGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQPLGAS*ASSASP
Trigger: AGGGGAGGCCGAGCTTGCCAAGCTGGCGCCCAGCGG...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp AGATCCATCCGGGGCAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGTGGTCTCCACTCTCATaGACCGACTGCCATGAGGAA +
Preference number: 5 (lower is better)
Translates to: RSIRGNLLIDAEGCTLGMWSPLS*TDCHEE
Trigger: TTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCA...CATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCGTCCTGAAGTCGGGCTaGGCCAGGAGACCAGTGAAC +
Preference number: 5 (lower is better)
Translates to: QPADRCGGLHVGDAILAVVLKSG*ARRPVN
Trigger: GTTCACTGGTCTCCTGGCCAAGCCCGACTTCAGGAC...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCACTGGTGCTTTGACTaGTCTTGCGCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQHWCFD*SCATPM
Trigger: CATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTG...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 90 bp TCTCCCCCAAATCGATCTCCAGCCACTCTCGTGGTTTGTGGTTGTTaGTACTGTCGCCCGAAGCCCATGATGGGCCTTGGTCCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SPPNRSPATLVVCGC*YCRPKPMMGLGPEV
Trigger: GACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS-3UTR CAA 90 bp GCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGACGTGGTTTGTGGTTGTaGCTACTGTCGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: ADRCGGLHVGDAILAVNGRGLWL*LLSPEA
Trigger: GGCTTCGGGCGACAGTAGCAACAACCACAAACCACG...TCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS GCA 90 bp GTAATCTGGCAACCAATGAGCTCCACCTTCAAGGCTATCCTCTGGTaGCATGTCTGGGGGACAACCCGCACATATCTGGCCACGATGGGA +
Preference number: 5 (lower is better)
Translates to: VIWQPMSSTFKAILW*HVWGTTRTYLATMG
Trigger: TCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGTTGCCAGATTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
ENST00000534777.5
CDS-3UTR CAA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGGGAAGAAGCTCTGATTaGCCCGTCAGGTTCAAAACT +
Preference number: 5 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQGRSSD*PVRFKT
Trigger: AGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCC...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCAGGAGACCAGTGAACTaGGTCTCCACTCTCATTGAC +
Preference number: 5 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFRRPVN*VSTLID
Trigger: GTCAATGAGAGTGGAGACCAAGTTCACTGGTCTCCT...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS TCA 90 bp GGCCATGTGGGGAACCTGGACTTCTACCTCCACCTGAGAGCTCCATaGGGCCGTACATCACTCTTCTGCTGGAGATGCATCAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: GHVGNLDFYLHLRAP*GRTSLFCWRCIREK
Trigger: TTTCTCTCTGATGCATCTCCAGCAGAAGAGTGATGTACGGCCTCATGGAGCTCTCAGGTGGAGGTAGAAGTCCAGGTTCCCCACATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS TCA 90 bp AATGTCAAGGAGGCCATGTGGGGAACCTGGACTTCTACCTCCACCTaGGAGCTCCATGAGGCCGTACATCACTCTTCTGCTGGAGATGCA +
Preference number: 5 (lower is better)
Translates to: NVKEAMWGTWTSTST*ELHEAVHHSSAGDA
Trigger: TGCATCTCCAGCAGAAGAGTGATGTACGGCCTCATGGAGCTCTCAGGTGGAGGTAGAAGTCCAGGTTCCCCACATGGCCTCCTTGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS CCA 90 bp TTCTTTTTCTCCCCCAAATCGATCTCCAGCCACTCTCGTGGTTTGTaGTTGTTGCTACTGTCGCCCGAAGCCCATGATGGGCCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: FFFSPKSISSHSRGL*LLLLSPEAHDGPWS
Trigger: GGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS-3UTR CAA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCCAGCTGGGCAGAATTaGCTGTATTCTGTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQPAGQN*LYSVFK
Trigger: TTTGAAGACAGAATACAGCAAATTCTGCCCAGCTGG...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCTCTCGTGGTTTGTGGTaGTTGCTACTGTCGCCCGAA +
Preference number: 5 (lower is better)
Translates to: QPADRCGGLHVGDAILAVSRGLW*LLLSPE
Trigger: TTCGGGCGACAGTAGCAACAACCACAAACCACGAGA...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp AGATCCATCCGGGGCAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGTACTGCCCTTTGTTGTaGTTAGGGTGGGAAAGAACA +
Preference number: 5 (lower is better)
Translates to: RSIRGNLLIDAEGCTLGMYCPLL*LGWERT
Trigger: TGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTA...CATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGAAACAGTATGACAGGTaGTCTCTAGGATCCTACTGG +
Preference number: 5 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQKQYDR*SLGSYW
Trigger: CCAGTAGGATCCTAGAGACAACCTGTCATACTGTTT...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 90 bp CTTCCAGGCTCCAACAGGTTTGACACTGTGAGCATGTTGCCCAGCTaGAGTGCAGTGTCTATTCACAGGCCTGATCACAGTGCACTACAG +
Preference number: 5 (lower is better)
Translates to: LPGSNRFDTVSMLPS*SAVSIHRPDHSALQ
Trigger: CTGTAGTGCACTGTGATCAGGCCTGTGAATAGACACTGCACTCCAGCTGGGCAACATGCTCACAGTGTCAAACCTGTTGGAGCCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525483.5
ENST00000528138.5
ENST00000533950.1
CDS-3UTR CAA 90 bp TCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCGCATGGATGGCAGCTTaGCACAATAAAGAGGTATCT +
Preference number: 5 (lower is better)
Translates to: SLLPVPCDSPTLSTTAGFAWMAA*HNKEVS
Trigger: AGATACCTCTTTATTGTGCAAAGCTGCCATCCATGC...GAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGAGGAGACCAGTGAACTaGGTCTCCACTCTCATTGAC +
Preference number: 5 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTRRPVN*VSTLID
Trigger: GTCAATGAGAGTGGAGACCAAGTTCACTGGTCTCCT...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp AACAGACGCACCCTAAGGGTCAGCACGAAACCAGCTGCACAATTTTGTAAACAGGTCATGGCCGTCTGGTaGAGGGGTGTGAGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: NRRTLRVSTKPAAQFCKQVMAVW*RGVRQS
Trigger: AGACTGCCTCACACCCCTCAACCAGACGGCCATGAC...CTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp CAGCAGGCTCCCTTCTTCCAGTGCCTTGTGACAGCCCGACGCTCAGTACCACAGCACACACTTCCCTCTTaGGCAAAAGAGGTTAAATCT +
Preference number: 5 (lower is better)
Translates to: QQAPFFQCLVTARRSVPQHTLPS*AKEVKS
Trigger: AGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTG...CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGGATCTGCTGCAACCATaGGAGGTAAACAGAAATCGC +
Preference number: 5 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTDLLQP*EVNRNR
Trigger: GCGATTTCTGTTTACCTCCAATGGTTGCAGCAGATC...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp CAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCGTTGGGGATGCTATTTaGGCAGTCAACGGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: QPADRCGGLHVGDAILAVVGDAI*AVNGVN
Trigger: GTTAACTCCGTTGACTGCCAAAATAGCATCCCCAAC...GACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp GTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGAGCCACTCTCGTGGTTaGTGGTTGTTGCTACTGTCG +
Preference number: 5 (lower is better)
Translates to: VRVGKNMVFQSSSLRSIRSHSRG*WLLLLS
Trigger: CGACAGTAGCAACAACCACAAACCACGAGAGTGGCT...CCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGAGGGATGAAATTGTTTaGCACTGGGTCCCGAAAGTT +
Preference number: 5 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTRDEIV*HWVPKV
Trigger: AACTTTCGGGACCCAGTGCAAAACAATTTCATCCCT...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS TCA 90 bp AGGAGACCAGTGAACTTGGTCTCCACTCTCATTGACCGACTGCCATaGGGAAGAAGCTCTGATTTGCCCGTCAGGTTCAAAACTCAAGGA +
Preference number: 5 (lower is better)
Translates to: RRPVNLVSTLIDRLP*GRSSDLPVRFKTQG
Trigger: TCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCAAGTTCACTGGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS GCA 90 bp TCTCCACTCTCATTGACCGACTGCCATGAGGAAGAAGCTCTGATTTaGCCGTCAGGTTCAAAACTCAAGGATCTGCTGCAACCATTGGAG +
Preference number: 5 (lower is better)
Translates to: SPLSLTDCHEEEALI*PSGSKLKDLLQPLE
Trigger: CTCCAATGGTTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS-3UTR CAA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAGTCCTGAAGTCGGGCTaGGCCAGGAGACCAGTGAAC +
Preference number: 5 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSVLKSG*ARRPVN
Trigger: GTTCACTGGTCTCCTGGCCAAGCCCGACTTCAGGAC...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp CTGCTGATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTGGCAGTCAACGTTAATTTACTGCCCTTaGTTGTTGTTAGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LLIDAEGCTLGMLFWQSTLIYCP*LLLGWE
Trigger: TTCCCACCCTAACAACAACAAAGGGCAGTAAATTAA...CGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS TCA 90 bp ACACCATTGGCCAGAATCCCTTCATATCGACTGATCCCTTTGCGCTaGAGCACACTGATCTGGCCACCTAGTTCATCAGCAATTATTCCT +
Preference number: 5 (lower is better)
Translates to: TPLARIPSYRLIPLR*STLIWPPSSSAIIP
Trigger: AGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS-3UTR CAA 90 bp AAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGGGCAACCTGCTGGACGGTTACTTCACTaGTGTTCAACAAGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KEHGVPILISEIHPGQPAGRLLH*CSTRVL
Trigger: AAGAACTCTTGTTGAACACAAGTGAAGTAACCGTCC...AGCAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp GCTGATCCATACGGACTTCCTTTCTTCTTCTTCTTTCTAAAGGCTGCAAAGATCCACTGGTGCTTTGACTaGTCTTGCGCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: ADPYGLPFFFFFLKAAKIHWCFD*SCATPM
Trigger: CATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTG...GATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR CAA 90 bp GTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATCCATCCGGATTTACTGCCCTTTGTaGTTGTTAGGGTGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: VRVGKNMVFQSSSLRSIRIYCPL*LLGWER
Trigger: TCTTTCCCACCCTAACAACAACAAAGGGCAGTAAAT...CCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS CCA 90 bp ACAGAGAGATCCCATGATAGGGCTTCTGGGATTGAAGATCTTACGTaGAGAAGTGGACTTTGGCCTCTGGAGTTACTCAAAAACACAGAA +
Preference number: 5 (lower is better)
Translates to: TERSHDRASGIEDLT*RSGLWPLELLKNTE
Trigger: TTCTGTGTTTTTGAGTAACTCCAGAGGCCAAAGTCCACTTCTCCACGTAAGATCTTCAATCCCAGAAGCCCTATCATGGGATCTCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS-3UTR CAA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCTGGTCTCCACTCTCATaGACCGACTGCCATGAGGAA +
Preference number: 5 (lower is better)
Translates to: ITPLTPKQLNISQRNENAWSPLS*TDCHEE
Trigger: TTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCA...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCATCTCGTGGTTTGTGGTaGTTGCTACTGTCGCCCGAA +
Preference number: 5 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSSRGLW*LLLSPE
Trigger: TTCGGGCGACAGTAGCAACAACCACAAACCACGAGA...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACAAGCCACTCTCGTGGTTaGTGGTTGTTGCTACTGTCG +
Preference number: 5 (lower is better)
Translates to: GNDSITTRLGLSRPAANTSHSRG*WLLLLS
Trigger: CGACAGTAGCAACAACCACAAACCACGAGAGTGGCT...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGAATGGGAGGGATGAAATaGTTTTGCACTGGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRMGGMK*FCTGSR
Trigger: TCGGGACCCAGTGCAAAACAATTTCATCCCTCCCAT...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS TCA 90 bp AACTGCTCCAGGAAGACACTTCAGCTTGAAATAACCATATTGATCTaGAGAGCTGGTGAAGAGAAGATAGTCAGAAGCACAGGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: NCSRKTLQLEITILI*RAGEEKIVRSTGLG
Trigger: TCCCAGACCTGTGCTTCTGACTATCTTCTCTTCACCAGCTCTTCAGATCAATATGGTTATTTCAAGCTGAAGTGTCTTCCTGGAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481630.1
CDS CCA 90 bp AGCACACTGATCTGGCCACCTAGTTCATCAGCAATTATTCCTGCATaGATGGCAGCTTTGCACAATAAAGAGGTCTGTATTCTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: STLIWPPSSSAIIPA*MAALHNKEVCILSS
Trigger: TGAAGACAGAATACAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS-3UTR CAA 90 bp TACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCCAGCTGGGCAGAATTaGCTGTATTCTGTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: YCPLLLLGWERTWCSNPHPAGQN*LYSVFK
Trigger: TTTGAAGACAGAATACAGCAAATTCTGCCCAGCTGG...ATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp TACTGCCCTTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATGCATGGATGGCAGCTTaGCACAATAAAGAGGTATCT +
Preference number: 5 (lower is better)
Translates to: YCPLLLLGWERTWCSNPHAWMAA*HNKEVS
Trigger: AGATACCTCTTTATTGTGCAAAGCTGCCATCCATGC...ATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGAGTAAACAGAAATCGCTaGTCTGACAGGGAACCATCC +
Preference number: 5 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRVNRNR*SDREPS
Trigger: GGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTAC...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAATGGGAGGGATGAAATaGTTTTGCACTGGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSMGGMK*FCTGSR
Trigger: TCGGGACCCAGTGCAAAACAATTTCATCCCTCCCAT...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGCACTGGTGCTTTGACTaGTCTTGCGCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWHWCFD*SCATPM
Trigger: CATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTG...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS CCA 90 bp AGCACACTGATCTGGCCACCTAGTTCATCAGCAATTATTCCTGCATaGATGGCAGCTTTGCACAATAAAGAGGTATCTCTATATCCATCT +
Preference number: 5 (lower is better)
Translates to: STLIWPPSSSAIIPA*MAALHNKEVSLYPS
Trigger: AGATGGATATAGAGATACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296955.12
ENST00000338728.10
CDS-3UTR CAA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCGTAAACAGAAATCGCTaGTCTGACAGGGAACCATCC +
Preference number: 5 (lower is better)
Translates to: ITPLTPKQLNISQRNENAVNRNR*SDREPS
Trigger: GGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTAC...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCGATCTGCTGCAACCATaGGAGGTAAACAGAAATCGC +
Preference number: 5 (lower is better)
Translates to: ITPLTPKQLNISQRNENADLLQP*EVNRNR
Trigger: GCGATTTCTGTTTACCTCCAATGGTTGCAGCAGATC...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 90 bp TCTCAAAGCGGACGGTTACTTCACTTGTGTTCAACAAGAGTTCTTTaGGAACAGTCATACTTCCACAGTATGGACCATATTGATCTGAAG +
Preference number: 5 (lower is better)
Translates to: SQSGRLLHLCSTRVL*EQSYFHSMDHIDLK
Trigger: CTTCAGATCAATATGGTCCATACTGTGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGAACACAAGTGAAGTAACCGTCCGCTTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS-3UTR CAA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACACTCGAAAGAACACCATaGGCCAGAATCCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: GNDSITTRLGLSRPAANTLERTP*ARIPSY
Trigger: ATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAG...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGGGAAGAAGCTCTGATTaGCCCGTCAGGTTCAAAACT +
Preference number: 5 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWGRSSD*PVRFKT
Trigger: AGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCC...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACAAGGGATGAAATTGTTTaGCACTGGGTCCCGAAAGTT +
Preference number: 5 (lower is better)
Translates to: GNDSITTRLGLSRPAANTRDEIV*HWVPKV
Trigger: AACTTTCGGGACCCAGTGCAAAACAATTTCATCCCT...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS-3UTR CAA 90 bp ATTACACCTTTAACACCAAAGCAGCTCAATATCAGTCAGAGGAATGAAAACGCCCAGGCTTCTTTCACATaGTGTTCACAAAAGGGCAGT +
Preference number: 5 (lower is better)
Translates to: ITPLTPKQLNISQRNENAQASFT*CSQKGS
Trigger: ACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTG...GGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 90 bp TGCCTTGTTGTATTATTTGACCTTAATATTCCTACATTCAACTGGTaGTATAGACAAGCAACCTCAAGAGCACAAGGCTTCAGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: CLVVLFDLNIPTFNW*YRQATSRAQGFSSL
Trigger: GAGAGAGCTGAAGCCTTGTGCTCTTGAGGTTGCTTGTCTATAGCACCAGTTGAATGTAGGAATATTAAGGTCAAATAATACAACAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS-3UTR CAA 90 bp TTTGTTGTTGTTAGGGTGGGAAAGAACATGGTGTTCCAATCCTCATCTCTGAGATTCAACAAGAGTTCTTaGGGAACAGTCATACTTCCA +
Preference number: 5 (lower is better)
Translates to: FVVVRVGKNMVFQSSSLRFNKSS*GTVILP
Trigger: TGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGAA...TCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp CTGTACCTTACAAAGAGTACTTTAATTTACTGCCCTTTGTTGTTGTTAGGGTGGCTCGAAAGAACACCATaGGCCAGAATCCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: LYLTKSTLIYCPLLLLGWLERTP*ARIPSY
Trigger: ATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAG...CCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296955.12
CDS-3UTR CAA 90 bp GGAAATGACTCAATAACAACAAGACTAGGTTTAAGCAGACCTGCTGCTAACACAATTACAGACGCCTCCTaGAGGGGAAAATCATTTCTT +
Preference number: 5 (lower is better)
Translates to: GNDSITTRLGLSRPAANTITDAS*RGKSFL
Trigger: AAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAAT...TGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS TCA 90 bp CTTGTGATTGTCTCATCTTCTTTCTTAGTTGAAACACTGGTGCTTTaGCTTGTCTTGCGCCACACCAATGAATCATTACCTTGTGTAATC +
Preference number: 5 (lower is better)
Translates to: LVIVSSSFLVETLVL*LVLRHTNESLPCVI
Trigger: GATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATCACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
ENST00000534777.5
CDS-3UTR CAA 90 bp ACACACACACTTCCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCAAAGCTCGATTTAGACTaGGTCAGAATCACTTTTGCA +
Preference number: 5 (lower is better)
Translates to: THTLPSLAKEVKSPIVNSKLDLD*VRITFA
Trigger: TGCAAAAGTGATTCTGACCAAGTCTAAATCGAGCTT...TGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS TCA 90 bp CTTGTGATTGTCTCATCTTCTTTCTTAGTTGAAACACTGGTGCTTTaGCTTGTCTTGCGCCACACCAATGAATCATTACCTTTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LVIVSSSFLVETLVL*LVLRHTNESLPFLH
Trigger: ATGAAGAAAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATCACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424717.6
CDS-3UTR CAA 90 bp CCCTCTTTGGCAAAAGAGGTTAAATCTCCCATAGTTAACTCACAAAAGAAACTCTTCAACAAGAGTTCTTaGGGAACAGTCATACTTCCA +
Preference number: 5 (lower is better)
Translates to: PSLAKEVKSPIVNSQKKLFNKSS*GTVILP
Trigger: TGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGAA...GAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS TCA 90 bp CTTATATTTGAGTCCTTTCAAAGTTTCATATTACATGGGCCTCTTTaGAGAACAAAGAACTGCTCCAGGAAGACACTTCAGCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: LIFESFQSFILHGPL*RTKNCSRKTLQLEI
Trigger: TATTTCAAGCTGAAGTGTCTTCCTGGAGCAGTTCTTTGTTCTTCAAAGAGGCCCATGTAATATGAAACTTTGAAAGGACTCAAATATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481630.1
CDS CCA 90 bp GATTCTATTAGTGAGTTTTTAGGTGTTTATCATCCCACTTATACCTaGTTATATGAAACCAAGGCAAGGATTCTATGTCGGTTGCATTTT +
Preference number: 5 (lower is better)
Translates to: DSISEFLGVYHPTYT*LYETKARILCRLHF
Trigger: AAAATGCAACCGACATAGAATCCTTGCCTTGGTTTCATATAACCAGGTATAAGTGGGATGATAAACACCTAAAAACTCACTAATAGAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CCA 72 bp TGTGGGCGCGCAGCACGTGCCGCTCCACGATGGGCGTaGCGTACTCGGGCTCCGGGGGCGCCAGGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: CGRAARAAPRWA*RTRAPGAPGAA
Trigger: CGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CAA 72 bp CGGGCGCCGGGCACCATGACCCCGCTGGGCGCCAGCTaGGCAAGCTCGGCCTCCCCTCGACGGATCCCGAGC +
Preference number: 6 (lower is better)
Translates to: RAPGTMTPLGAS*ASSASPRRIPS
Trigger: GCTCGGGATCCGTCGAGGGGAGGCCGAGCTTGCCAAGCTGGCGCCCAGCGGGGTCATGGTGCCCGGCGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000528162.1
CDS CCA 72 bp AGAACGTGTGGGCGCGCAGCACGTGCCGCTCCACGATaGGCGTGGCGTACTCGGGCTCCGGGGGCGCCAGGG +
Preference number: 6 (lower is better)
Translates to: RTCGRAARAAPR*AWRTRAPGAPG
Trigger: CCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 72 bp CCGCTCTGCGCAGAGAACGTGTGGGCGCGCAGCACGTaGCGCTCCACGATGGGCGTGGCGTACTCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PLCAENVWARST*RSTMGVAYSGS
Trigger: GGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 72 bp CCCGCTGCGGGCAGTCATAGTGGCCGCCGGCATCGGTaGTCACCCCTGCCTCCTCGGCATCCGTGTCCATGG +
Preference number: 6 (lower is better)
Translates to: PAAGSHSGRRHR*SPLPPRHPCPW
Trigger: CCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CAA 90 bp GGGCCGGTCGTAGCCCCTGTCCGCAGGCTGTGCGCTGTGTGGCCTTaGATAGTCTCCGTCCTGGGCGCCCACACCCGCTACGGGGGAGAA +
Preference number: 6 (lower is better)
Translates to: GPVVAPVRRLCAVWP*IVSVLGAHTRYGGE
Trigger: TTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS TCA 72 bp GAGAGTCAGGGTGCCCGCTTTCGGTGGCGAGGGCGCTaGCAGCTTTGGGCCGGTCGTAGCCCCTGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: ESQGARFRWRGR*QLWAGRSPCPQ
Trigger: CTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 72 bp CGAGGAGAGGGAGTGTTTGTGGCCGGGCTGGGGCCCTaGGACGCGGTAGCCGCTCTGCGCAGAGAACGTGTG +
Preference number: 6 (lower is better)
Translates to: RGEGVFVAGLGP*DAVAALRRERV
Trigger: CACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 72 bp GCAGTCATAGTGGCCGCCGGCATCGGTGCTCACCCCTaGCTCCTCGGCATCCGTGTCCATGGGCCGGAAGGT +
Preference number: 6 (lower is better)
Translates to: AVIVAAGIGAHP*LLGIRVHGPEG
Trigger: ACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CAA 72 bp GTAGCCCCTGTCCGCAGGCTGTGCGCTGTGTGGCCTTaGATAGTCTCCGTCCTGGGCGCCCACACCCGCTAC +
Preference number: 6 (lower is better)
Translates to: VAPVRRLCAVWP*IVSVLGAHTRY
Trigger: GTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CAA 90 bp GGCAGTCTCTGGGGGCAGAATAGCTGTCACTCGTCCCGGGATGCGTaGGGGGCTTCTGAGAGTCAGGGTGCCCGCTTTCGGTGGCGAGGG +
Preference number: 6 (lower is better)
Translates to: GSLWGQNSCHSSRDA*GASESQGARFRWRG
Trigger: CCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGAGACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 72 bp AGCTTTGGGCCGGTCGTAGCCCCTGTCCGCAGGCTGTaGGCTGTGTGGCCTTTGATAGTCTCCGTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: SFGPVVAPVRRL*AVWPLIVSVLG
Trigger: GCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CCA 72 bp GGGGGCAGAATAGCTGTCACTCGTCCCGGGATGCGTTaGGGGCTTCTGAGAGTCAGGGTGCCCGCTTTCGGT +
Preference number: 6 (lower is better)
Translates to: GGRIAVTRPGMR*GLLRVRVPAFG
Trigger: ACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS CAA 72 bp TGGGGGCAGAATAGCTGTCACTCGTCCCGGGATGCGTaGGGGGCTTCTGAGAGTCAGGGTGCCCGCTTTCGG +
Preference number: 6 (lower is better)
Translates to: WGQNSCHSSRDA*GASESQGARFR
Trigger: CCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 72 bp GCCGAAATAATCCCAGCTCTGGCCACTAAACCCCAATaGCTGGACCTGGCTGGCCAGCTCCTCCGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: AEIIPALATKPQ*LDLAGQLLRLQ
Trigger: CTGCAGGCGGAGGAGCTGGCCAGCCAGGTCCAGGCATTGGGGTTTAGTGGCCAGAGCTGGGATTATTTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528162.1
CDS TCA 72 bp TGGTTTGTGGTTGTTGCTACTGTCGCCCGAAGCCCATaGTGGGCCTTGGTCCTGAAGTCGGGCTTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: WFVVVATVARSP*WALVLKSGLAR
Trigger: CCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS GCA 72 bp CAACCAATGAGCTCCACCTTCAAGGCTATCCTCTGGTaGCATGTCTGGGGGACAACCCGCACATATCTGGCC +
Preference number: 6 (lower is better)
Translates to: QPMSSTFKAILW*HVWGTTRTYLA
Trigger: GGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
ENST00000534777.5
CDS CCA 72 bp TCCCCCAAATCGATCTCCAGCCACTCTCGTGGTTTGTaGTTGTTGCTACTGTCGCCCGAAGCCCATGATGGG +
Preference number: 6 (lower is better)
Translates to: SPKSISSHSRGL*LLLLSPEAHDG
Trigger: CCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CAA 72 bp CCCAAATCGATCTCCAGCCACTCTCGTGGTTTGTGGTaGTTGCTACTGTCGCCCGAAGCCCATGATGGGCCT +
Preference number: 6 (lower is better)
Translates to: PKSISSHSRGLW*LLLSPEAHDGP
Trigger: AGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS TCA 72 bp GTTGCCCAGCTGGAGTGCAGTGTCTATTCACAGGCCTaGTCACAGTGCACTACAGCTTCCAGCTCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: VAQLECSVYSQA*SQCTTASSSWS
Trigger: AGACCAGGAGCTGGAAGCTGTAGTGCACTGTGATCAGGCCTGTGAATAGACACTGCACTCCAGCTGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525483.5
ENST00000528138.5
ENST00000533950.1
CDS TCA 72 bp GGGAACCTGGACTTCTACCTCCACCTGAGAGCTCCATaGGGCCGTACATCACTCTTCTGCTGGAGATGCATC +
Preference number: 6 (lower is better)
Translates to: GNLDFYLHLRAP*GRTSLFCWRCI
Trigger: GATGCATCTCCAGCAGAAGAGTGATGTACGGCCTCATGGAGCTCTCAGGTGGAGGTAGAAGTCCAGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS GCA 72 bp AATCGATCTCCAGCCACTCTCGTGGTTTGTGGTTGTTaGTACTGTCGCCCGAAGCCCATGATGGGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: NRSPATLVVCGC*YCRPKPMMGLG
Trigger: ACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CAA 72 bp AAATCGATCTCCAGCCACTCTCGTGGTTTGTGGTTGTaGCTACTGTCGCCCGAAGCCCATGATGGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: KSISSHSRGLWL*LLSPEAHDGPW
Trigger: CCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CAA 90 bp CTTGTGACAGCCCGACGCTCAGTACCACAGCAGGCTTCTTTCACATaGTGTTCACAAAAGGGCAGTCATGGCCGTCTGGTTGAGGGGTGT +
Preference number: 6 (lower is better)
Translates to: LVTARRSVPQQASFT*CSQKGSHGRLVEGC
Trigger: ACACCCCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 72 bp TGCACTACAGCTTCCAGCTCCTGGTCTCAGTCCTCCTaGCGCAGCCTTCTGAGTAGCTGGAACTACAGTATA +
Preference number: 6 (lower is better)
Translates to: CTTASSSWSQSS*RSLLSSWNYSI
Trigger: TATACTGTAGTTCCAGCTACTCAGAAGGCTGCGGCAGGAGGACTGAGACCAGGAGCTGGAAGCTGTAGTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525483.5
ENST00000528138.5
ENST00000533950.1
CDS CCA 72 bp CTTTTTCTCCCCCAAATCGATCTCCAGCCACTCTCGTaGTTTGTGGTTGTTGCTACTGTCGCCCGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: LFLPQIDLQPLS*FVVVATVARSP
Trigger: TGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CAA 72 bp TTCTCCCCCAAATCGATCTCCAGCCACTCTCGTGGTTaGTGGTTGTTGCTACTGTCGCCCGAAGCCCATGAT +
Preference number: 6 (lower is better)
Translates to: FSPKSISSHSRG*WLLLLSPEAHD
Trigger: ATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CAA 72 bp GCCCGACGCTCAGTACCACAGCAGGCTTCTTTCACATaGTGTTCACAAAAGGGCAGTCATGGCCGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: ARRSVPQQASFT*CSQKGSHGRLV
Trigger: AACCAGACGGCCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTGCTGTGGTACTGAGCGTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338728.10
CDS GCA 72 bp GCCGAAATAATCCCAGCTCTGGCCACTAAACCCCAATaGCTGGACCTGGCTGGACTCAAAAACACAGAACGA +
Preference number: 6 (lower is better)
Translates to: AEIIPALATKPQ*LDLAGLKNTER
Trigger: TCGTTCTGTGTTTTTGAGTCCAGCCAGGTCCAGGCATTGGGGTTTAGTGGCCAGAGCTGGGATTATTTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533950.1
CDS TCA 72 bp GCCAGAATCCCTTCATATCGACTGATCCCTTTGCGCTaGAGCACACTGATCTGGCCACCTAGTTCATCAGCA +
Preference number: 6 (lower is better)
Translates to: ARIPSYRLIPLR*STLIWPPSSSA
Trigger: TGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CCA 72 bp TCCAACAGGTTTGACACTGTGAGCATGTTGCCCAGCTaGAGTGCAGTGTCTATTCACAGGCCTGATCACAGT +
Preference number: 6 (lower is better)
Translates to: SNRFDTVSMLPS*SAVSIHRPDHS
Trigger: ACTGTGATCAGGCCTGTGAATAGACACTGCACTCCAGCTGGGCAACATGCTCACAGTGTCAAACCTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525483.5
ENST00000528138.5
ENST00000533950.1
CDS CAA 72 bp ACCCGCACATATCTGGCCACGATGGGAGGGATGAAATaGTTTTGCACTGGGTCCCGAAAGTTAGAGTTACCC +
Preference number: 6 (lower is better)
Translates to: TRTYLATMGGMK*FCTGSRKLELP
Trigger: GGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
ENST00000534777.5
CDS CAA 72 bp GATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTaGGCAGTCAACGGAGTTAACCTGCCATATCACTTG +
Preference number: 6 (lower is better)
Translates to: DRCGGLHVGDAI*AVNGVNLPYHL
Trigger: CAAGTGATATGGCAGGTTAACTCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296955.12
ENST00000533453.5
CDS CAA 90 bp CACAAGTGGGACACACAGAGAGATCCCATGATAGGGCTTCTGGGATaGAAGATCTTACGTGGAGAAGTGGACTTTGGCCTCTGGAGTTAC +
Preference number: 6 (lower is better)
Translates to: HKWDTQRDPMIGLLG*KILRGEVDFGLWSY
Trigger: GTAACTCCAGAGGCCAAAGTCCACTTCTCCACGTAAGATCTTCAATCCCAGAAGCCCTATCATGGGATCTCTCTGTGTGTCCCACTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS TCA 72 bp GCTGCAACCATTGGAGGTAAACAGAAATCGCTTGTCTaGCAGGGAACCATCCCTCGAAAGAACACCATTGGC +
Preference number: 6 (lower is better)
Translates to: AATIGGKQKSLV*QGTIPRKNTIG
Trigger: GCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGTTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CCA 72 bp ATAGATGCGGAGGGCTGCACGTTGGGGATGCTATTTTaGCAGTCAACGGAGTTAACCTGCCATATCACTTGT +
Preference number: 6 (lower is better)
Translates to: IDAEGCTLGMLF*QSTELTCHITC
Trigger: ACAAGTGATATGGCAGGTTAACTCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296955.12
ENST00000533453.5
CDS CCA 72 bp TCCCAGCTCTGGCCACTAAACCCCAATGCCTGGACCTaGCTGGACTCAAAAACACAGAACGATACTTTGATA +
Preference number: 6 (lower is better)
Translates to: SQLWPLNPNAWT*LDSKTQNDTLI
Trigger: TATCAAAGTATCGTTCTGTGTTTTTGAGTCCAGCCAGGTCCAGGCATTGGGGTTTAGTGGCCAGAGCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533950.1
CDS CAA 72 bp GACACACAGAGAGATCCCATGATAGGGCTTCTGGGATaGAAGATCTTACGTGGAGAAGTGGACTTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: DTQRDPMIGLLG*KILRGEVDFGL
Trigger: GAGGCCAAAGTCCACTTCTCCACGTAAGATCTTCAATCCCAGAAGCCCTATCATGGGATCTCTCTGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS CAA 90 bp GACAACCCGCACATATCTGGCCACGATGGGAGGGATGAAATTGTTTaGCACTGGGTCCCGAAAGTTAGAGTTACCCTGAAACACCTTTTC +
Preference number: 6 (lower is better)
Translates to: DNPHISGHDGRDEIV*HWVPKVRVTLKHLF
Trigger: GAAAAGGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000534777.5
CDS GCA 72 bp TCATTGACCGACTGCCATGAGGAAGAAGCTCTGATTTaGCCGTCAGGTTCAAAACTCAAGGATCTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: SLTDCHEEEALI*PSGSKLKDLLQ
Trigger: TTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CCA 72 bp TCTGGCCACGATGGGAGGGATGAAATTGTTTTGCACTaGGTCCCGAAAGTTAGAGTTACCCTGAAACACCTT +
Preference number: 6 (lower is better)
Translates to: SGHDGRDEIVLH*VPKVRVTLKHL
Trigger: AAGGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000534777.5
CDS CCA 72 bp TCTGGCCACGATGGGAGGGATGAAATTGTTTTGCACTaGGTCCCGAAAGTTAGAGTTACCCTGAAACACCTA +
Preference number: 6 (lower is better)
Translates to: SGHDGRDEIVLH*VPKVRVTLKHL
Trigger: TAGGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CAA 72 bp TTGTCTGACAGGGAACCATCCCTCGAAAGAACACCATaGGCCAGAATCCCTTCATATCGACTGATCCCTTTG +
Preference number: 6 (lower is better)
Translates to: LSDREPSLERTP*ARIPSYRLIPL
Trigger: CAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CAA 90 bp GGCCAGAAATGTGGGATCCACTCTCAAAGCGGACGGTTACTTCACTaGTGTTCAACAAGAGTTCTTTGGGAACAGTCATACTTCCACAGT +
Preference number: 6 (lower is better)
Translates to: GQKCGIHSQSGRLLH*CSTRVLWEQSYFHS
Trigger: ACTGTGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGAACACAAGTGAAGTAACCGTCCGCTTTGAGAGTGGATCCCACATTTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CCA 72 bp TCCCATGATAGGGCTTCTGGGATTGAAGATCTTACGTaGAGAAGTGGACTTTGGCCTCTGGAGTTACTCAAA +
Preference number: 6 (lower is better)
Translates to: SHDRASGIEDLT*RSGLWPLELLK
Trigger: TTTGAGTAACTCCAGAGGCCAAAGTCCACTTCTCCACGTAAGATCTTCAATCCCAGAAGCCCTATCATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS CAA 72 bp CACATATCTGGCCACGATGGGAGGGATGAAATTGTTTaGCACTGGGTCCCGAAAGTTAGAGTTACCCTGAAA +
Preference number: 6 (lower is better)
Translates to: HISGHDGRDEIV*HWVPKVRVTLK
Trigger: TTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
ENST00000534777.5
CDS CAA 72 bp CTGCTGGAGATGCATCAGAGAGAAAGCCAGCATAGATaGTTTTATGCTGGCGATCATTCTGGGGCTGATTCT +
Preference number: 6 (lower is better)
Translates to: LLEMHQRESQHR*FYAGDHSGADS
Trigger: AGAATCAGCCCCAGAATGATCGCCAGCATAAAACAATCTATGCTGGCTTTCTCTCTGATGCATCTCCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS TCA 72 bp GGACCTGGCTGGACTCAAAAACACAGAACGATACTTTaGTACGTTGAGTCTCCTCCTAACTTCAGTTTTCGC +
Preference number: 6 (lower is better)
Translates to: GPGWTQKHRTIL*YVESPPNFSFR
Trigger: GCGAAAACTGAAGTTAGGAGGAGACTCAACGTATCAAAGTATCGTTCTGTGTTTTTGAGTCCAGCCAGGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533950.1
CDS CAA 72 bp TGTGGGATCCACTCTCAAAGCGGACGGTTACTTCACTaGTGTTCAACAAGAGTTCTTTGGGAACAGTCATAC +
Preference number: 6 (lower is better)
Translates to: CGIHSQSGRLLH*CSTRVLWEQSY
Trigger: GTATGACTGTTCCCAAAGAACTCTTGTTGAACACAAGTGAAGTAACCGTCCGCTTTGAGAGTGGATCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS CAA 90 bp ATCACTCTTCTGCTGGAGATGCATCAGAGAGAAAGCCAGCATAGATaGTTTTATGCTGGCGATCATTCTGGGGCTGATTCTCTCAATCAA +
Preference number: 6 (lower is better)
Translates to: ITLLLEMHQRESQHR*FYAGDHSGADSLNQ
Trigger: TTGATTGAGAGAATCAGCCCCAGAATGATCGCCAGCATAAAACAATCTATGCTGGCTTTCTCTCTGATGCATCTCCAGCAGAAGAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS CAA 90 bp ATAGACAAGCAACCTCAAGAGCACAAGGCTTCAGCTCTCTCACTTTaGCCATTTCCTTCCGAATTCTCATTGTCACTAACAGGATCCCAA +
Preference number: 6 (lower is better)
Translates to: IDKQPQEHKASALSL*PFPSEFSLSLTGSQ
Trigger: TTGGGATCCTGTTAGTGACAATGAGAATTCGGAAGGAAATGGCAAAAGTGAGAGAGCTGAAGCCTTGTGCTCTTGAGGTTGCTTGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CCA 72 bp TCTGGGATTGAAGATCTTACGTGGAGAAGTGGACTTTaGCCTCTGGAGTTACTCAAAAACACAGAACGATAC +
Preference number: 6 (lower is better)
Translates to: SGIEDLTWRSGL*PLELLKNTERY
Trigger: GTATCGTTCTGTGTTTTTGAGTAACTCCAGAGGCCAAAGTCCACTTCTCCACGTAAGATCTTCAATCCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528138.5
CDS CAA 72 bp CAACCTCAAGAGCACAAGGCTTCAGCTCTCTCACTTTaGCCATTTCCTTCCGAATTCTCATTGTCACTAACA +
Preference number: 6 (lower is better)
Translates to: QPQEHKASALSL*PFPSEFSLSLT
Trigger: TGTTAGTGACAATGAGAATTCGGAAGGAAATGGCAAAAGTGAGAGAGCTGAAGCCTTGTGCTCTTGAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CCA 72 bp ATCTGGCCACCTAGTTCATCAGCAATTATTCCTGCATaGATGGCAGCTTTGCACAATAAAGAGGTATCTCTA +
Preference number: 6 (lower is better)
Translates to: IWPPSSSAIIPA*MAALHNKEVSL
Trigger: TAGAGATACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296955.12
ENST00000338728.10
CDS CCA 72 bp ATCTGGCCACCTAGTTCATCAGCAATTATTCCTGCATaGATGGCAGCTTTGCACAATAAAGAGGTCTGTATT +
Preference number: 6 (lower is better)
Translates to: IWPPSSSAIIPA*MAALHNKEVCI
Trigger: AATACAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CAA 72 bp CGGACGGTTACTTCACTTGTGTTCAACAAGAGTTCTTaGGGAACAGTCATACTTCCACAGTATGGACCATAT +
Preference number: 6 (lower is better)
Translates to: RTVTSLVFNKSS*GTVILPQYGPY
Trigger: ATATGGTCCATACTGTGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGAACACAAGTGAAGTAACCGTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS TCA 72 bp GTCTCATCTTCTTTCTTAGTTGAAACACTGGTGCTTTaGCTTGTCTTGCGCCACACCAATGAATCATTACCT +
Preference number: 6 (lower is better)
Translates to: VSSSFLVETLVL*LVLRHTNESLP
Trigger: AGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000424717.6
ENST00000533453.5
ENST00000534777.5
CDS CCA 72 bp GGACGGTTACTTCACTTGTGTTCAACAAGAGTTCTTTaGGAACAGTCATACTTCCACAGTATGGACCATATT +
Preference number: 6 (lower is better)
Translates to: GRLLHLCSTRVL*EQSYFHSMDHI
Trigger: AATATGGTCCATACTGTGGAAGTATGACTGTTCCCAAAGAACTCTTGTTGAACACAAGTGAAGTAACCGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296955.12
ENST00000338728.10
ENST00000533453.5
CDS GCA 72 bp GTTCATCAGCAATTATTCCTGCATGGATGGCAGCTTTaGACAATAAAGAGGTATCTCTATATCCATCTACCA +
Preference number: 6 (lower is better)
Translates to: VHQQLFLHGWQL*TIKRYLYIHLP
Trigger: TGGTAGATGGATATAGAGATACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296955.12
ENST00000338728.10
CDS GCA 72 bp GTTCATCAGCAATTATTCCTGCATGGATGGCAGCTTTaGACAATAAAGAGGTCTGTATTCTGTCTTCAAATA +
Preference number: 6 (lower is better)
Translates to: VHQQLFLHGWQL*TIKRSVFCLQI
Trigger: TATTTGAAGACAGAATACAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS GCA 72 bp GTATTATTTGACCTTAATATTCCTACATTCAACTGGTaGTATAGACAAGCAACCTCAAGAGCACAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: VLFDLNIPTFNW*YRQATSRAQGF
Trigger: GAAGCCTTGTGCTCTTGAGGTTGCTTGTCTATAGCACCAGTTGAATGTAGGAATATTAAGGTCAAATAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CCA 72 bp GTTGTATTATTTGACCTTAATATTCCTACATTCAACTaGTGCTATAGACAAGCAACCTCAAGAGCACAAGGC +
Preference number: 6 (lower is better)
Translates to: VVLFDLNIPTFN*CYRQATSRAQG
Trigger: GCCTTGTGCTCTTGAGGTTGCTTGTCTATAGCACCAGTTGAATGTAGGAATATTAAGGTCAAATAATACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CCA 72 bp AGTGAGTTTTTAGGTGTTTATCATCCCACTTATACCTaGTTATATGAAACCAAGGCAAGGATTCTATGTCGG +
Preference number: 6 (lower is better)
Translates to: SEFLGVYHPTYT*LYETKARILCR
Trigger: CCGACATAGAATCCTTGCCTTGGTTTCATATAACCAGGTATAAGTGGGATGATAAACACCTAAAAACTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CAA 72 bp AGTTCATCAGCAATTATTCCTGCATGGATGGCAGCTTaGCACAATAAAGAGGTCTGTATTCTGTCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: SSSAIIPAWMAA*HNKEVCILSSN
Trigger: ATTTGAAGACAGAATACAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS CAA 72 bp TACGAGTCATTTACAGTCATGAAACTACTCCTGCACTaGGCACTTGTGTTATTTTCTGCACCTGTTATTTTC +
Preference number: 6 (lower is better)
Translates to: YESFTVMKLLLH*ALVLFSAPVIF
Trigger: GAAAATAACAGGTGCAGAAAATAACACAAGTGCCAAGTGCAGGAGTAGTTTCATGACTGTAAATGACTCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS TCA 72 bp TTTAGGTGTTTATCATCCCACTTATACCTGGTTATATaGAACCAAGGCAAGGATTCTATGTCGGTTGCATTT +
Preference number: 6 (lower is better)
Translates to: FRCLSSHLYLVI*NQGKDSMSVAF
Trigger: AAATGCAACCGACATAGAATCCTTGCCTTGGTTTCATATAACCAGGTATAAGTGGGATGATAAACACCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533453.5
CDS TCA 72 bp ATAAGCGTATTTTCAACTACGAGTCATTTACAGTCATaGAACTACTCCTGCACTTGGCACTTGTGTTATTTT +
Preference number: 6 (lower is better)
Translates to: ISVFSTTSHLQS*NYSCTWHLCYF
Trigger: AAAATAACACAAGTGCCAAGTGCAGGAGTAGTTTCATGACTGTAAATGACTCGTAGTTGAAAATACGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533453.5