RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCANP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000251380

Ensembl transcript IDs: ENST00000503143.3

Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGCCAGCCCAACCTCTaGTTGCTATCCTCAGAGCCCCTCCAGGGTCTCCTTGGCAGGGGC +
Preference number: 1 (lower is better)
Translates to: LGGQQAWAQSSQPNL*LLSSEPLQGLLGRG
Trigger: GCCCCTGCCAAGGAGACCCTGGAGGGGCTCTGAGGATAGCAATCAGAGGTTGGGCTGGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp GAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTaGCCCAGCCAGAGGGTCTGTGCTGTCCCTGCTGAGGCCTACAGG +
Preference number: 1 (lower is better)
Translates to: EGSTSLVLPQLEGLR*PSQRVCAVPAEAYR
Trigger: CCTGTAGGCCTCAGCAGGGACAGCACAGACCCTCTGGCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp GTGGGCAACAGGCCTGGGCTCAGTCCAGCCAGCCCAACCTCTGATTaGTATCCTCAGAGCCCCTCCAGGGTCTCCTTGGCAGGGGCTGTC +
Preference number: 1 (lower is better)
Translates to: VGNRPGLSPASPTSD*YPQSPSRVSLAGAV
Trigger: GACAGCCCCTGCCAAGGAGACCCTGGAGGGGCTCTGAGGATAGCAATCAGAGGTTGGGCTGGCTGGACTGAGCCCAGGCCTGTTGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp GGGTCTGGTGCGGTGTCCGGTGAACGGCTGCAATGCAGGTTAGGCTaGCACCATGAGGGAAGCTGGAGGGAGGACCTGTTAACCTCATGG +
Preference number: 1 (lower is better)
Translates to: GSGAVSGERLQCRLG*HHEGSWREDLLTSW
Trigger: CCATGAGGTTAACAGGTCCTCCCTCCAGCTTCCCTCATGGTGGCAGCCTAACCTGCATTGCAGCCGTTCACCGGACACCGCACCAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR TCA 90 bp ATCACGTTCTCAGTCCTTTCCTGTGTGGATGGAGTGTTGGCACAGTaGGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCACGG +
Preference number: 1 (lower is better)
Translates to: ITFSVLSCVDGVLAQ*GGCCKWTRRGWSAR
Trigger: CCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCACACAGGAAAGGACTGAGAACGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp TGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAGTGAGTaGTCCACCATGGGCCTCCCTTCCTCCAGGTTGCATCCAGGACTA +
Preference number: 1 (lower is better)
Translates to: CKELEVSPGRQARSE*STMGLPSSRLHPGL
Trigger: TAGTCCTGGATGCAACCTGGAGGAAGGGAGGCCCATGGTGGAGCACTCACTCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp AAAGGCCACCGGGAACACAAGAGCCAACAACCCATGGCCTTTGTCTaGAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAGTGAG +
Preference number: 1 (lower is better)
Translates to: KGHREHKSQQPMAFV*KELEVSPGRQARSE
Trigger: CTCACTCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCTTGTGTTCCCGGTGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp ACATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTaGTGCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCC +
Preference number: 1 (lower is better)
Translates to: TWSLLASAPLCWLQP*CSVGGCGKNRFSVP
Trigger: GGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp TGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTaGTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATT +
Preference number: 1 (lower is better)
Translates to: WSLLASAPLCWLQPC*SVGGCGKNRFSVPI
Trigger: AATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR TCA 90 bp TCCTCCAGGTTGCATCCAGGACTATGCTGTCTAGCGTGTCTGCTGTaGCTTCCTCATGGCAGAGCCCCACACTGTGGCTGTTTATGGAGC +
Preference number: 1 (lower is better)
Translates to: SSRLHPGLCCLACLL*LPHGRAPHCGCLWS
Trigger: GCTCCATAAACAGCCACAGTGTGGGGCTCTGCCATGAGGAAGTCACAGCAGACACGCTAGACAGCATAGTCCTGGATGCAACCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR TCA 90 bp AACTGGGCTGGGTTGTTTACTCCTCCCACAGTCTTGGATGGGTTTTaGGGGTCTGGTGCGGTGTCCGGTGAACGGCTGCAATGCAGGTTA +
Preference number: 1 (lower is better)
Translates to: NWAGLFTPPTVLDGF*GSGAVSGERLQCRL
Trigger: TAACCTGCATTGCAGCCGTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAGTAAACAACCCAGCCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp TGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTaGTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAG +
Preference number: 1 (lower is better)
Translates to: WAVVERIGSQFPFQL*YLDTGRPGNSPLTK
Trigger: CTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAGCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR GCA 90 bp TATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTaGTCTACACGTTTCTGTAGTGACCGTCCATTTGAAGGGATAGGG +
Preference number: 1 (lower is better)
Translates to: YLDTGRPGNSPLTKS*STRFCSDRPFEGIG
Trigger: CCCTATCCCTTCAAATGGACGGTCACTACAGAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR TCA 90 bp TTCCCTCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATaGAACTCACTCCTTTGGGTTAAGCATCACGTTCTCAGTCCTTTC +
Preference number: 1 (lower is better)
Translates to: FPQCPAVKLLKPPIL*NSLLWVKHHVLSPF
Trigger: GAAAGGACTGAGAACGTGATGCTTAACCCAAAGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp CACCCCAGCTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCAGGCACGGAGTGAGTaGTCCACCATGGGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HPSWPTGFPPLWASHCPCQARSE*STMGLP
Trigger: AGGGAGGCCCATGGTGGAGCACTCACTCCGTGCCTG...GCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAGCTGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCCTCCAGGGTCTCCTTaGCAGGGGCTGTCCCCTATG +
Preference number: 2 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVPPGSP*QGLSPM
Trigger: CATAGGGGACAGCCCCTGCCAAGGAGACCCTGGAGG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR CAA 90 bp AGTCCTTTCCTGTGTGGATGGAGTGTTGGCACAGTGAGGCGGGTGTaGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGCTGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: SPFLCGWSVGTVRRV*QVDASGVVCTGWPA
Trigger: TGCAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCACACAGGAAAGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR CAA 90 bp GGTGGTGGAGGTCGCAATGCGCTGTCCCCACCACATGGAGCTTGCTaGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: GGGGRNALSPPHGAC*PPHLFAGCSLAAQW
Trigger: CCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGTGGTGGGGACAGCGCATTGCGACCTCCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGTCCTCTGTTCAGCTCTaGAAAGGCCACCGGGAACAC +
Preference number: 2 (lower is better)
Translates to: LANWLPTTMGLALPMPGLSSVQL*KGHREH
Trigger: GTGTTCCCGGTGGCCTTTCCAGAGCTGAACAGAGGA...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGTCCCTTCCTCCAGGTTaGATCCAGGACTATGCTGTC +
Preference number: 2 (lower is better)
Translates to: LANWLPTTMGLALPMPGLSLPPG*IQDYAV
Trigger: GACAGCATAGTCCTGGATGCAACCTGGAGGAAGGGA...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTCTGCACGGGCTGGCCTaGATAGCCCAGGGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: MELACLRTSLLAAALLLSLHGLA*IAQGWR
Trigger: TCTCCACCCCTGGGCTATGCAGGCCAGCCCGTGCAG...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCCTGAGTGTAGACTaGGTCCATGTGCCTACATGC +
Preference number: 2 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVCLSVD*VHVPTC
Trigger: GCATGTAGGCACATGGACCCAGTCTACACTCAGGCA...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGCACTGTGGCTGTTTATaGAGCATTTGCAAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: LANWLPTTMGLALPMPGLHCGCL*SICKSP
Trigger: GGGAGACTTGCAAATGCTCCATAAACAGCCACAGTG...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp AGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTTGGACGCGTCGGGGGTaGTCTGCACGGGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: RHRETWKQPLDKVLLYTFWTRRG*SARAGL
Trigger: CAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCA...AAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGGGAGCAGCGTTCATGTaGACTGTATGTTCGTGTTTA +
Preference number: 2 (lower is better)
Translates to: LANWLPTTMGLALPMPGLGAAFM*TVCSCL
Trigger: TAAACACGAACATACAGTGCACATGAACGCTGCTCC...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTTGCATCCAGGACTATaGTGTCTAGCGTGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVLHPGL*CLACLL
Trigger: CAGCAGACACGCTAGACAGCATAGTCCTGGATGCAA...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR CAA 90 bp ACTTCCTCATGGCAGAGCCCCACACTGTGGCTGTTTATGGAGCATTaGCAAGTCTCCCTCGAGGGGAGCCCGTGTCTCTCACGGACAGCT +
Preference number: 2 (lower is better)
Translates to: TSSWQSPTLWLFMEH*QVSLEGSPCLSRTA
Trigger: AGCTGTCCGTGAGAGACACGGGCTCCCCTCGAGGGAGACTTGCAAATGCTCCATAAACAGCCACAGTGTGGGGCTCTGCCATGAGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR CAA 90 bp GGGAACACAAGAGCCAACAACCCATGGCCTTTGTCTGCAAGGAACTaGAGGTCTCACCGGGCAGACAGGCACGGAGTGAGTGCTCCACCA +
Preference number: 2 (lower is better)
Translates to: GNTRANNPWPLSARN*RSHRADRHGVSAPP
Trigger: TGGTGGAGCACTCACTCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCTTGTGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR CAA 90 bp CACATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTaGCTGCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: HMELACLRTSLLAAA*LLSGRLWKESVLSS
Trigger: GGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp GCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTGCCCTATGGAGACTTGGTaGGCAACAGGCCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: AQWAVVERIGSQFPFQLCPMETW*ATGLGS
Trigger: TGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGG...GCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTGTCCATGTGCCTACATaGATTCAGTTCCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: MELACLRTSLLAAALLLSVHVPT*IQFLPP
Trigger: TGGTGGGAGGAACTGAATGCATGTAGGCACATGGAC...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp AGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCATGGCCTTTGTCTaGAAGGAACTTGAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: RTRRKHQPCSAPARGSALPMAFV*KELEVS
Trigger: TGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGG...CAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp CAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGCCCAGAGCCCCACACTGTaGCTGTTTATGGAGCATTTG +
Preference number: 2 (lower is better)
Translates to: QTRTYGDLVGNRPGLSPAQSPTL*LFMEHL
Trigger: CAAATGCTCCATAAACAGCCACAGTGTGGGGCTCTG...GGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp AGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGAGAGCCAACAACCCATaGCCTTTGTCTGCAAGGAAC +
Preference number: 2 (lower is better)
Translates to: RTRRKHQPCSAPARGSALRANNP*PLSARN
Trigger: GTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCT...CAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTTTCCCATTCCAGCTCTaGTATTTAGACACCGGGAGA +
Preference number: 2 (lower is better)
Translates to: MELACLRTSLLAAALLLSFPFQL*YLDTGR
Trigger: TCTCCCGGTGTCTAAATAGCAGAGCTGGAATGGGAA...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp CAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGCCCTCTCACGGACAGCTTaGCAAGATTCACATTCTTGG +
Preference number: 2 (lower is better)
Translates to: QTRTYGDLVGNRPGLSPALSRTA*QDSHSW
Trigger: CCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAG...GGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp TGTGACATGCACCCTGTCAAATCCATAAACCTTCCTCAGCAGTCACCACACAGAATCCAAGGGGACTGCTaGCTTGACCACCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: CDMHPVKSINLPQQSPHRIQGDC*LDHQSP
Trigger: GGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGAT...TCTGTGTGGTGACTGCTGAGGAAGGTTTATGGATTTGACAGGGTGCATGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp TGTGACATGCACCCTGTCAAATCCATAAACCTTCCTCAGCAGTCACCACACAGACCTCCACTTCCTGTCTaGCCATGGCTTCGCGGCCTT +
Preference number: 2 (lower is better)
Translates to: CDMHPVKSINLPQQSPHRPPLPV*PWLRGL
Trigger: AAGGCCGCGAAGCCATGGGCAGACAGGAAGTGGAGG...TCTGTGTGGTGACTGCTGAGGAAGGTTTATGGATTTGACAGGGTGCATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp TCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTTTGGGTGGCTTCCCACCACTATaGGCCTCGCACTGCCCATGC +
Preference number: 2 (lower is better)
Translates to: SCCETVKATHPMKLTPLGGFPPL*ASHCPC
Trigger: GCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCC...ACCCAAAGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTCCCCAGCTGGCCAACTaGCTTCCCACCACTATGGGC +
Preference number: 2 (lower is better)
Translates to: SVSCCETVKATHPMKLTPPQLAN*LPTTMG
Trigger: GCCCATAGTGGTGGGAAGCCAGTTGGCCAGCTGGGG...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR GCA 90 bp GCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTGCCCCTTGACAAAGTCTTaGTCTACACGTTTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: AQWAVVERIGSQFPFQLCPLTKS*STRFCS
Trigger: ACTACAGAAACGTGTAGAGCAAGACTTTGTCAAGGG...GCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCCAGAACTATAGTAAGTaGGGGTGGGGACAAGAATTC +
Preference number: 2 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSQNYSK*GWGQEF
Trigger: GAATTCTTGTCCCCACCCCCACTTACTATAGTTCTG...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp GGTCAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCACAAGATTCACATTCTTaGAAAAGCAGAGGAATGCGA +
Preference number: 2 (lower is better)
Translates to: GQTRTYGDLVGNRPGLSPQDSHS*KSRGMR
Trigger: TCGCATTCCTCTGCTTTTCCAAGAATGTGAATCTTG...TGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTGTGTGGATGGAGTGTTaGCACAGTGAGGCGGGTGTT +
Preference number: 2 (lower is better)
Translates to: SVSCCETVKATHPMKLTPVWMEC*HSEAGV
Trigger: AACACCCGCCTCACTGTGCCAACACTCCATCCACAC...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR CAA 90 bp TTCCAGCTCTGCTATTTAGACACCGGGAGACCTGGAAACAGCCCCTaGACAAAGTCTTGCTCTACACGTTTCTGTAGTGACCGTCCATTT +
Preference number: 2 (lower is better)
Translates to: FQLCYLDTGRPGNSP*TKSCSTRFCSDRPF
Trigger: AAATGGACGGTCACTACAGAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAGCAGAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp AGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTAGAATTGTAGTGCTCTaGGGTATGCCTGAATGTAAC +
Preference number: 2 (lower is better)
Translates to: RHRETWKQPLDKVLLYTFRIVVL*GMPECN
Trigger: GTTACATTCAGGCATACCCCAGAGCACTACAATTCT...AAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CCA 90 bp TCACATTCTTGGAAAAGCAGAGGAATGCGAGGGTTAAAATACCTTAAAGGGCAATACAAGAAGAAACTGTaGCACGGAGAGATTCAGTTA +
Preference number: 2 (lower is better)
Translates to: SHSWKSRGMRGLKYLKGQYKKKL*HGEIQL
Trigger: TAACTGAATCTCTCCGTGCCACAGTTTCTTCTTGTA...TTGCCCTTTAAGGTATTTTAACCCTCGCATTCCTCTGCTTTTCCAAGAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CAA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTCTCTCACGGACAGCTaGGCAAGATTCACATTCTTG +
Preference number: 3 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVSLTDS*ARFTFL
Trigger: CAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGA...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CAA 90 bp AGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCTGTTTATGGAGCATTaGCAAGTCTCCCTCGAGGGG +
Preference number: 3 (lower is better)
Translates to: RTRRKHQPCSAPARGSALLFMEH*QVSLEG
Trigger: CCCCTCGAGGGAGACTTGCAAATGCTCCATAAACAG...CAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR-3UTR CAA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTCTCCCTTCCTCCAGGTaGCATCCAGGACTATGCTGT +
Preference number: 3 (lower is better)
Translates to: SVSCCETVKATHPMKLTPLPSSR*HPGLCC
Trigger: ACAGCATAGTCCTGGATGCAACCTGGAGGAAGGGAG...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
3UTR TCA 72 bp TCAAATGGTAGGTTTTATTTCACTTTAATCCGCCTGTaGGTTCACGTTAAAGGTAAGAGGAATCACAGCCCT +
Preference number: 3 (lower is better)
Translates to: SNGRFYFTLIRL*VHVKGKRNHSP
Trigger: AGGGCTGTGATTCCTCTTACCTTTAACGTGAACTCACAGGCGGATTAAAGTGAAATAAAACCTACCATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGCCCAAAGTTCTCTGGTaGAGCTGGGGAGTGGCACCC +
Preference number: 4 (lower is better)
Translates to: LANWLPTTMGLALPMPGLPKVLW*SWGVAP
Trigger: GGGTGCCACTCCCCAGCTCCACCAGAGAACTTTGGG...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGCTGGCCTGCATAGCCCCAGAGGGCCCTAGCTaGGAGCAGCGTTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: GVASGRVGGGLHGLACIAPEGPS*EQRSCA
Trigger: TGCACATGAACGCTGCTCCCAGCTAGGGCCCTCTGG...GGCTATGCAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCAGACAGGCACGGAGTaGGTGCTCCACCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVQTGTE*VLHHGP
Trigger: AGGCCCATGGTGGAGCACTCACTCCGTGCCTGTCTG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCTCACCCGCCTGCTCTaGCTGTCTGAGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVLTRLL*LSEQVR
Trigger: CCTCACCTGCTCAGACAGCCAGAGCAGGCGGGTGAG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGGCTGTGACTTCCTCATaGCAGAGCCCCACACTGTGG +
Preference number: 4 (lower is better)
Translates to: LANWLPTTMGLALPMPGLAVTSS*QSPTLW
Trigger: CCACAGTGTGGGGCTCTGCCATGAGGAAGTCACAGC...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCCCCAGCTGGCCAACTaGCTTCCCACCACTATGGGC +
Preference number: 4 (lower is better)
Translates to: EGSTSLVLPQLEGLRCPSPQLAN*LPTTMG
Trigger: GCCCATAGTGGTGGGAAGCCAGTTGGCCAGCTGGGG...GCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGCTGGCCTGCATAGCCGAACCTATGGAGACTTaGTGGGCAACAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVASGRVGGGLHGLACIAEPMET*WATGLG
Trigger: GCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTC...GGCTATGCAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGACAGTGGAAGACAGGTaGCTCAGCTGGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LANWLPTTMGLALPMPGLTVEDR*LSWQPT
Trigger: AGTGGGCTGCCAGCTGAGCCACCTGTCTTCCACTGT...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCTTCCTGTCTGCCCATaGCTTCGCGGCCTTCTCACC +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVLPVCP*LRGLLT
Trigger: GGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CACCCCAGCTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCTCCGCACCTCTTTGCTaGCTGCAGCCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HPSWPTGFPPLWASHCPCSAPLC*LQPCCS
Trigger: TGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGA...GCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAGCTGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCAGAGGCTGTCCCCACCACATaGAGCTTGCTTGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: KHQPCSAPARGSALPQPEAVPTT*SLLASA
Trigger: TGCGGAGGCAAGCAAGCTCCATGTGGTGGGGACAGC...CTCTGGCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGCTGGCCTGCATAGCCACAGTCTCCAGGCCGTaGCTTCTCGAGTTCTGTATG +
Preference number: 4 (lower is better)
Translates to: GVASGRVGGGLHGLACIATVSRP*LLEFCM
Trigger: CATACAGAACTCGAGAAGCCACGGCCTGGAGACTGT...GGCTATGCAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGCTGGCCTGCATAGCCGGTTTTGTTCCTCCCTaGAGGGTAGAGACCCTCACT +
Preference number: 4 (lower is better)
Translates to: GVASGRVGGGLHGLACIAGFVPP*RVETLT
Trigger: AGTGAGGGTCTCTACCCTCCAGGGAGGAACAAAACC...GGCTATGCAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCTATGCAGTTCATCCTaGGTCCCTGAGGGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVLCSSS*VPEGLA
Trigger: TGCGAGGCCCTCAGGGACCCAGGATGAACTGCATAG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTCAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGGTGGGCAACAGGCCTaGGCTCAGTCCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GQTRTYGDLVGNRPGLSPGGQQA*AQSSQP
Trigger: GGGCTGGCTGGACTGAGCCCAGGCCTGTTGCCCACC...TGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTGGCGGGTGTTGCAAGTaGACGCGTCGGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: MELACLRTSLLAAALLLSGGCCK*TRRGWS
Trigger: AGACCACCCCCGACGCGTCCACTTGCAACACCCGCC...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp CAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGCCCCCCTGTGGAGGAATTaGACTGCCCCCTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: QTRTYGDLVGNRPGLSPAPLWRN*TAPSRR
Trigger: CCTGCGAGAGGGGGCAGTTCAATTCCTCCACAGGGG...GGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCGGGGACAGGAAGTGCTaGCTGAGAACTGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVGDRKC*LRTVSL
Trigger: CAGAGAGACAGTTCTCAGTCAGCACTTCCTGTCCCC...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGCTGGAAACAGCCCCTTaGCAAAGTCTTGCTCTACAC +
Preference number: 4 (lower is better)
Translates to: LANWLPTTMGLALPMPGLLETAP*QSLALH
Trigger: GTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAG...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGGGCTTCCCACCACTATaGGCCTCGCACTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: RTRRKHQPCSAPARGSALGFPPL*ASHCPC
Trigger: GCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCC...CAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTCCTCCAGGGTCTCCTTaGCAGGGGCTGTCCCCTATG +
Preference number: 4 (lower is better)
Translates to: MELACLRTSLLAAALLLSPPGSP*QGLSPM
Trigger: CATAGGGGACAGCCCCTGCCAAGGAGACCCTGGAGG...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTGCCCTGAAGCCAGCCTaGCGGTTCCAGCTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: MELACLRTSLLAAALLLSALKPA*RFQLLG
Trigger: TCCTAACAGCTGGAACCGTCAGGCTGGCTTCAGGGC...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp AGCCAACAACCCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGAACCCAGGCAGCAGTCTaGCCAGAGGGCCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQQPMAFVCKELEVSPGRTQAAV*PEGPSW
Trigger: CCAGCTAGGGCCCTCTGGTCAGACTGCTGCCTGGGT...TCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCTGCCCATGCCGGGCCTaGGGGGCCTGGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSCPCRA*GAWLRL
Trigger: AAGTCTGAGCCAGGCCCCTCAGGCCCGGCATGGGCA...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGCTGGCCTGCATAGCCCACTGTGGCTGTTTATaGAGCATTTGCAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GVASGRVGGGLHGLACIAHCGCL*SICKSP
Trigger: GGGAGACTTGCAAATGCTCCATAAACAGCCACAGTG...GGCTATGCAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCAGACACCGGGAGACCTaGAAACAGCCCCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: EGSTSLVLPQLEGLRCPSRHRET*KQPLDK
Trigger: TTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCT...GCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCTCCTCCCACAGTCTTaGATGGGTTTTGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVLLPQS*MGFEGL
Trigger: CAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGGCATCTCCTCTTAACTaGGCTGGGTTGTTTACTCCT +
Preference number: 4 (lower is better)
Translates to: LANWLPTTMGLALPMPGLASPLN*AGLFTP
Trigger: AGGAGTAAACAACCCAGCCCAGTTAAGAGGAGATGC...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCGGTAGAGACCCTCACTaGGGCCCTGGAGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSGRDPH*GPGEGH
Trigger: GTGCCCCTCTCCAGGGCCTCAGTGAGGGTCTCTACC...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCGCGAAGACCAGGCCCTaGAGCCAGCCTGACGGTTCC +
Preference number: 4 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSAKTRP*SQPDGS
Trigger: GGAACCGTCAGGCTGGCTTCAGGGCCTGGTCTTCGC...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTAGCCAGCCCAACCTCTaGTTGCTATCCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: MELACLRTSLLAAALLLSSQPNL*LLSSEP
Trigger: GGGCTCTGAGGATAGCAATCAGAGGTTGGGCTGGCT...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTGTTGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGCTGGCCTGCATAGCCCAGAACTATAGTAAGTaGGGGTGGGGACAAGAATTC +
Preference number: 4 (lower is better)
Translates to: GVASGRVGGGLHGLACIAQNYSK*GWGQEF
Trigger: GAATTCTTGTCCCCACCCCCACTTACTATAGTTCTG...GGCTATGCAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCAGAGCAGAGCCCCACACTGTaGCTGTTTATGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: KHQPCSAPARGSALPQPEQSPTL*LFMEHL
Trigger: CAAATGCTCCATAAACAGCCACAGTGTGGGGCTCTG...CTCTGGCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCTCAGTGGGCGGTTGTaGAAAGAATCGGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: EGSTSLVLPQLEGLRCPSLSGRL*KESVLS
Trigger: ACTGAGAACCGATTCTTTCCACAACCGCCCACTGAG...GCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCAGAGCTACGTGTCACGGGGTaGATGCTGAGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KHQPCSAPARGSALPQPELRVTG*MLRKRK
Trigger: TTTTCTCTTCCTCAGCATCCACCCCGTGACACGTAG...CTCTGGCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCAACCTCATGGTACTGTaGCGACATCAGCCACCACTA +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVNLMVL*RHQPPL
Trigger: TAGTGGTGGCTGATGTCGCCACAGTACCATGAGGTT...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp CACCCCAGCTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCTCTACTCAAGAAAAATaGAGTCTCGGATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HPSWPTGFPPLWASHCPCSTQEK*SLGWAE
Trigger: CTCTGCCCATCCGAGACTTCATTTTTCTTGAGTAGA...GCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAGCTGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp AAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCAGAGAAGCCACCCATCCTATaGAACTCACTCCTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: KHQPCSAPARGSALPQPEKPPIL*NSLLWV
Trigger: AACCCAAAGGAGTGAGTTTCATAGGATGGGTGGCTT...CTCTGGCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGACTTTAATCCGCCTGTaGGTTCACGTTAAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LANWLPTTMGLALPMPGLTLIRL*VHVKGK
Trigger: CTTACCTTTAACGTGAACTCACAGGCGGATTAAAGT...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCTCTCACGGACAGCTTaGCAAGATTCACATTCTTGG +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVLSRTA*QDSHSW
Trigger: CCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCGCCTATTGGACCTTCTaGTGCAAGGAGCAGATTAAA +
Preference number: 4 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVAYWTF*CKEQIK
Trigger: TTTAATCTGCTCCTTGCATCAGAAGGTCCAATAGGC...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCCCCTGCGGTGGGAGCTaGGAGAATGCAGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSPCGGS*ENAVEV
Trigger: AACCTCCACTGCATTCTCTCAGCTCCCACCGCAGGG...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCGGAGTGTTGGCACAGTaGGGCGGGTGTTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSGVLAQ*GGCCKW
Trigger: CCACTTGCAACACCCGCCTCACTGTGCCAACACTCC...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTGCTGCAGTGGAGGTTGTTaGGAGGAACTCACCCGCCTG +
Preference number: 4 (lower is better)
Translates to: AQWAVVERIGSQFPFQLCCSGGC*EELTRL
Trigger: CAGGCGGGTGAGTTCCTCCCAACAACCTCCACTGCA...GCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGCCCCTTTCCTGTGTGGATaGAGTGTTGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QTRTYGDLVGNRPGLSPAPFLCG*SVGTVR
Trigger: CCTCACTGTGCCAACACTCCATCCACACAGGAAAGG...GGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTCAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCACACCATGAGGGAAGCTaGAGGGAGGACCTGTTAACC +
Preference number: 4 (lower is better)
Translates to: GQTRTYGDLVGNRPGLSPHHEGS*REDLLT
Trigger: GGTTAACAGGTCCTCCCTCCAGCTTCCCTCATGGTG...TGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp AGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTGTTAGGCTGCCACCATaGGGGAAGCTGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RHRETWKQPLDKVLLYTFVRLPP*GKLEGG
Trigger: TCCTCCCTCCAGCTTCCCTCATGGTGGCAGCCTAAC...AAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACGCACCCTGGGAACTCTaGGGTTTCCCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYAPWEL*GFPTSS
Trigger: GGAGCTGGTGGGGAAACCCCAGAGTTCCCAGGGTGC...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AGCGTTCATGTGCACTGTATGTTCGTGTTTAGTGTATGTCTGTGCATACTTGCGTGGACGCGTCGGGGGTaGTCTGCACGGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SVHVHCMFVFSVCLCILAWTRRG*SARAGL
Trigger: CAGGCCAGCCCGTGCAGACCACCCCCGACGCGTCCA...CGCAAGTATGCACAGACATACACTAAACACGAACATACAGTGCACATGAACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACCCACTGCAGGGGTGGTaGAGGTCGCAATGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYPLQGW*RSQCAV
Trigger: GACAGCGCATTGCGACCTCCACCACCCCTGCAGTGG...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp GGTCAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGGCTGTCTGAGCAGGTaGGGGATAGTGATATCAAGT +
Preference number: 4 (lower is better)
Translates to: GQTRTYGDLVGNRPGLSPGCLSR*GIVISS
Trigger: ACTTGATATCACTATCCCTCACCTGCTCAGACAGCC...TGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp GGTCAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCACCCCAGGGTTCTGCTTaGGTTAGAGCTACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GQTRTYGDLVGNRPGLSPPQGSA*VRATKS
Trigger: AGACTTTGTAGCTCTAACTCAAGCAGAACCCTGGGG...TGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AGCCAACAACCCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGATGCCTGAGTGTAGACTaGGTCCATGTGCCTACATGC +
Preference number: 4 (lower is better)
Translates to: SQQPMAFVCKELEVSPGRCLSVD*VHVPTC
Trigger: GCATGTAGGCACATGGACCCAGTCTACACTCAGGCA...TCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGTCAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCACAGTCCTTTCCTGTGTaGATGGAGTGTTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GQTRTYGDLVGNRPGLSPQSFPV*MECWHS
Trigger: ACTGTGCCAACACTCCATCCACACAGGAAAGGACTG...TGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTGCAGCCTTGCTGCTCAGTaGGCGGTTGTGGAAAGAATC +
Preference number: 4 (lower is better)
Translates to: AQWAVVERIGSQFPFQLCSLAAQ*AVVERI
Trigger: GATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCT...GCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTGACCATTTTGGTCAGTaGCAGATCACTGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: MELACLRTSLLAAALLLSDHFGQ*QITAAF
Trigger: AAAAGCAGCAGTGATCTGTCACTGACCAAAATGGTC...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp TGTGACATGCACCCTGTCAAATCCATAAACCTTCCTCAGCAGTCACCACACAGATGGTGCGGTGTCCGGTaGACGGCTGCAATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CDMHPVKSINLPQQSPHRWCGVR*TAAMQV
Trigger: AACCTGCATTGCAGCCGTTCACCGGACACCGCACCA...TCTGTGTGGTGACTGCTGAGGAAGGTTTATGGATTTGACAGGGTGCATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACGTCTTGGATGGGTTTTaGGGGTCTGGTGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYVLDGF*GSGAVS
Trigger: GGACACCGCACCAGACCCTCAAAACCCATCCAAGAC...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCATTCCCAAAGTTCTCTaGTGGAGCTGGGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSIPKVL*WSWGVA
Trigger: TGCCACTCCCCAGCTCCACCAGAGAACTTTGGGAAT...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTGCAGAGCCAACAACCCATaGCCTTTGTCTGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: AQWAVVERIGSQFPFQLCRANNP*PLSARN
Trigger: GTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCT...GCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACCCTATGGAGACTTGGTaGGCAACAGGCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYPMETW*ATGLGS
Trigger: TGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGG...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTAGCCCACTGCAGGGGTaGTGGAGGTCGCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: SVSCCETVKATHPMKLTPSPLQG*WRSQCA
Trigger: AGCGCATTGCGACCTCCACCACCCCTGCAGTGGGCT...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AGCGTTCATGTGCACTGTATGTTCGTGTTTAGTGTATGTCTGTGCATACTTGCGTGGGGAGTGGCACCCTaGGAACTCTGGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SVHVHCMFVFSVCLCILAWGVAP*ELWGFP
Trigger: GGGGAAACCCCAGAGTTCCCAGGGTGCCACTCCCCA...CGCAAGTATGCACAGACATACACTAAACACGAACATACAGTGCACATGAACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TTTCCCGTTTTCTACAAGAAGAAACTGTGGCACGGAGAGATTCAGTTACTTGTCGTTCACTCAGGCACGTaGGCTGCCCTGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FPVFYKKKLWHGEIQLLVVHSGT*AALRWE
Trigger: CTCCCACCGCAGGGCAGCCCACGTGCCTGAGTGAAC...GACAAGTAACTGAATCTCTCCGTGCCACAGTTTCTTCTTGTAGAAAACGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGCCAGAATTGTAGTGCTCTaGGGTATGCCTGAATGTAAC +
Preference number: 4 (lower is better)
Translates to: QTRTYGDLVGNRPGLSPARIVVL*GMPECN
Trigger: GTTACATTCAGGCATACCCCAGAGCACTACAATTCT...GGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp AGCGTTCATGTGCACTGTATGTTCGTGTTTAGTGTATGTCTGTGCATACTTGCGTTCATCCTGGGTCCCTaGGGGCCTCGCAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: SVHVHCMFVFSVCLCILAFILGP*GPRRCF
Trigger: GAAGCATCTGCGAGGCCCTCAGGGACCCAGGATGAA...CGCAAGTATGCACAGACATACACTAAACACGAACATACAGTGCACATGAACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACGCTGTTAGGAGAAAGTaGAGGTGGGTGCCATGGATC +
Preference number: 4 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYAVRRK*RWVPWI
Trigger: GATCCATGGCACCCACCTTCACTTTCTCCTAACAGC...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTCTAGCGTGTCTGCTGTaGCTTCCTCATGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SVSCCETVKATHPMKLTPLACLL*LPHGRA
Trigger: GGCTCTGCCATGAGGAAGTCACAGCAGACACGCTAG...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTTCGCAGGACCCCAGCTaGCAAGGTTTTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVSCCETVKATHPMKLTPSQDPS*QGFVPP
Trigger: GGGAGGAACAAAACCTTGCCAGCTGGGGTCCTGCGA...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TGTGACATGCACCCTGTCAAATCCATAAACCTTCCTCAGCAGTCACCACACAGAGTGTGGATGGAGTGTTaGCACAGTGAGGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: CDMHPVKSINLPQQSPHRVWMEC*HSEAGV
Trigger: AACACCCGCCTCACTGTGCCAACACTCCATCCACAC...TCTGTGTGGTGACTGCTGAGGAAGGTTTATGGATTTGACAGGGTGCATGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACGTTGGGGGACCATTTTaGTCAGTGACAGATCACTGC +
Preference number: 4 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYVGGPF*SVTDHC
Trigger: GCAGTGATCTGTCACTGACCAAAATGGTCCCCCAAC...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp TGTGACATGCACCCTGTCAAATCCATAAACCTTCCTCAGCAGTCACCACACAGAACAGGAAGTGCTGACTaGGAACTGTCTCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CDMHPVKSINLPQQSPHRTGSAD*ELSLCD
Trigger: GTCACAGAGAGACAGTTCTCAGTCAGCACTTCCTGT...TCTGTGTGGTGACTGCTGAGGAAGGTTTATGGATTTGACAGGGTGCATGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTTCCCACAGTCTTGGATaGGTTTTGAGGGTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SVSCCETVKATHPMKLTPSHSLG*VLRVWC
Trigger: GCACCAGACCCTCAAAACCCATCCAAGACTGTGGGA...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACTCCGTAATGCATAGTTaGGGGACCATTTTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYSVMHS*GTILVS
Trigger: ACTGACCAAAATGGTCCCCCAACTATGCATTACGGA...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTGCTGAGAGAATGCAGTaGAGGTTGTTGGGAGGAACT +
Preference number: 4 (lower is better)
Translates to: SVSCCETVKATHPMKLTPAERMQ*RLLGGT
Trigger: AGTTCCTCCCAACAACCTCCACTGCATTCTCTCAGC...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCTACAAGAAGAAACTGTaGCACGGAGAGATTCAGTTA +
Preference number: 4 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSYKKKL*HGEIQL
Trigger: TAACTGAATCTCTCCGTGCCACAGTTTCTTCTTGTA...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTTTGGGTGACCTGTTAACCTCATaGTACTGTGGCGACATCAGC +
Preference number: 4 (lower is better)
Translates to: SCCETVKATHPMKLTPLGDLLTS*YCGDIS
Trigger: GCTGATGTCGCCACAGTACCATGAGGTTAACAGGTC...ACCCAAAGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCACATTCTTGGAAAAGCAGAGGAATGCGAGGGTTAAAATACCTTAAAGGGCAATCCTCTGTTCAGCTCTaGAAAGGCCACCGGGAACAC +
Preference number: 4 (lower is better)
Translates to: SHSWKSRGMRGLKYLKGQSSVQL*KGHREH
Trigger: GTGTTCCCGGTGGCCTTTCCAGAGCTGAACAGAGGA...TTGCCCTTTAAGGTATTTTAACCCTCGCATTCCTCTGCTTTTCCAAGAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp AGCGTTCATGTGCACTGTATGTTCGTGTTTAGTGTATGTCTGTGCATACTTGCGAGAACTGTCTCTCTGTaGCATGCACCCTGTCAAATC +
Preference number: 4 (lower is better)
Translates to: SVHVHCMFVFSVCLCILARTVSL*HAPCQI
Trigger: GATTTGACAGGGTGCATGTCACAGAGAGACAGTTCT...CGCAAGTATGCACAGACATACACTAAACACGAACATACAGTGCACATGAACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR TCA 90 bp TCACATTCTTGGAAAAGCAGAGGAATGCGAGGGTTAAAATACCTTAAAGGGCAATCACGGGGTGGATGCTaGGGAAGAGAAAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SHSWKSRGMRGLKYLKGQSRGGC*GRENRA
Trigger: TGCTCTGTTTTCTCTTCCTCAGCATCCACCCCGTGA...TTGCCCTTTAAGGTATTTTAACCCTCGCATTCCTCTGCTTTTCCAAGAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TTTCCCGTTTTCTACAAGAAGAAACTGTGGCACGGAGAGATTCAGTTACTTGTCACTGCCTTAAAAACTTaGTACAGGGCAAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FPVFYKKKLWHGEIQLLVTALKT*YRARCE
Trigger: CTCACACCTTGCCCTGTACCAAGTTTTTAAGGCAGT...GACAAGTAACTGAATCTCTCCGTGCCACAGTTTCTTCTTGTAGAAAACGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTTTGGGTCAAGATTCACATTCTTaGAAAAGCAGAGGAATGCGA +
Preference number: 4 (lower is better)
Translates to: SCCETVKATHPMKLTPLGQDSHS*KSRGMR
Trigger: TCGCATTCCTCTGCTTTTCCAAGAATGTGAATCTTG...ACCCAAAGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp AGCGTTCATGTGCACTGTATGTTCGTGTTTAGTGTATGTCTGTGCATACTTGCGAAAACAGAGCAGAGCTaGAGAAGTTCGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: SVHVHCMFVFSVCLCILAKTEQS*RSSYSR
Trigger: TCTACTGTACGAACTTCTCCAGCTCTGCTCTGTTTT...CGCAAGTATGCACAGACATACACTAAACACGAACATACAGTGCACATGAACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CCA 90 bp TCACATTCTTGGAAAAGCAGAGGAATGCGAGGGTTAAAATACCTTAAAGGGCAAAGACCAAAATACATGTaGCTTCTTCTCCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SHSWKSRGMRGLKYLKGQRPKYM*LLLLAS
Trigger: GCTGGCAAGGAGAAGAAGCCACATGTATTTTGGTCT...TTGCCCTTTAAGGTATTTTAACCCTCGCATTCCTCTGCTTTTCCAAGAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGAGAATGCAGTGGAGGTaGTTGGGAGGAACTCACCCG +
Preference number: 5 (lower is better)
Translates to: LANWLPTTMGLALPMPGLRMQWR*LGGTHP
Trigger: CGGGTGAGTTCCTCCCAACAACCTCCACTGCATTCT...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp CTGGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGCCGGGCCTGCTGCTCAGTGGGCGGTaGTGGAAAGAATCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LANWLPTTMGLALPMPGLLLSGR*WKESVL
Trigger: GAGAACCGATTCTTTCCACAACCGCCCACTGAGCAG...CAGGCCCGGCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp GAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCCCACCACATGGAGCTaGCTTGCCTCCGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: EGSTSLVLPQLEGLRCPSPTTWS*LASAPL
Trigger: AAGAGGTGCGGAGGCAAGCAAGCTCCATGTGGTGGG...GCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCATGCAGTGGAGGTTGTaGGGAGGAACTCACCCGCCT +
Preference number: 5 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVMQWRL*GGTHPP
Trigger: AGGCGGGTGAGTTCCTCCCAACAACCTCCACTGCAT...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTACAGTGAGGCGGGTGTaGCAAGTGGACGCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: MELACLRTSLLAAALLLSTVRRV*QVDASG
Trigger: CCCCGACGCGTCCACTTGCAACACCCGCCTCACTGT...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp AAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCAGAGCCACATGGAGCTTGCTaGCCTCCGCACCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KHQPCSAPARGSALPQPEPHGAC*PPHLFA
Trigger: AGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGTGG...CTCTGGCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp CAGACTAGAACCTATGGAGACTTGGTGGGCAACAGGCCTGGGCTCAGTCCAGCCTCCCCTGTGGAGGAATaGAACTGCCCCCTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: QTRTYGDLVGNRPGLSPASPVEE*NCPLSQ
Trigger: CTGCGAGAGGGGGCAGTTCAATTCCTCCACAGGGGA...GGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp TGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGTCCTGTTTATGGAGCATTaGCAAGTCTCCCTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: WSVGTVRRVLQVDASGVVLFMEH*QVSLEG
Trigger: CCCCTCGAGGGAGACTTGCAAATGCTCCATAAACAG...GACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp AAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGCGCTGCCCCAGCCAGAGCTTAACTGGGCTGGGTaGTTTACTCCTCCCACAGTC +
Preference number: 5 (lower is better)
Translates to: KHQPCSAPARGSALPQPELNWAG*FTPPTV
Trigger: GACTGTGGGAGGAGTAAACAACCCAGCCCAGTTAAG...CTCTGGCTGGGGCAGCGCAGACCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp GCTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTGCTTGCTGGCTGCAGCCTaGCTGCTCAGTGGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: AQWAVVERIGSQFPFQLCLLAAA*LLSGRL
Trigger: CAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAA...GCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp AGCCAACAACCCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGATGCCTCCGCACCTCTTaGCTGGCTGCAGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQQPMAFVCKELEVSPGRCLRTS*LAAALL
Trigger: CAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCA...TCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp ATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTGCTTCACTCGAAAGATaGGAGTTGCAGAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: MELACLRTSLLAAALLLSASLER*ELQSPL
Trigger: CAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGC...ACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACAAAATCCCCTCCCTGTaGCCTACCAGGTCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYKIPSL*PTRSVA
Trigger: AGCCACGGACCTGGTAGGCAACAGGGAGGGGATTTT...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACTGTGGCTTCTTCTCCTaGCCAGCCCTACCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYCGFFS*PALPGH
Trigger: ATGCCCTGGTAGGGCTGGCAAGGAGAAGAAGCCACA...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp AGCCAACAACCCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGAAGTTGGGGGACCATTTaGGTCAGTGACAGATCACTG +
Preference number: 5 (lower is better)
Translates to: SQQPMAFVCKELEVSPGRSWGTI*VSDRSL
Trigger: CAGTGATCTGTCACTGACCAAAATGGTCCCCCAACT...TCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp CTATTTAGACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACCTCGAAAGATTGGAGTaGCAGAGTCCCCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LFRHRETWKQPLDKVLLYLERLE*QSPLWR
Trigger: CCTCCACAGGGGACTCTGCAACTCCAATCTTTCGAG...GTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTGGAAAAGCTCTCTCACGGACAGCTaGGCAAGATTCACATTCTTG +
Preference number: 5 (lower is better)
Translates to: GSPCLSRTAWQDSHSWKSSLTDS*ARFTFL
Trigger: CAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGA...GCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTAGAACCTATGGAGACTaGGTGGGCAACAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SVSCCETVKATHPMKLTPRTYGD*VGNRPG
Trigger: CCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCT...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTTTGTCTGCAAGGAACTaGAGGTCTCACCGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SVSCCETVKATHPMKLTPLSARN*RSHRAD
Trigger: GTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAA...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTAGTCTTGGATGGGTTTaGAGGGTCTGGTGCGGTGTC +
Preference number: 5 (lower is better)
Translates to: SVSCCETVKATHPMKLTPSLGWV*RVWCGV
Trigger: GACACCGCACCAGACCCTCAAAACCCATCCAAGACT...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp TGTGACATGCACCCTGTCAAATCCATAAACCTTCCTCAGCAGTCACCACACAGACCTGGAAACAGCCCCTaGACAAAGTCTTGCTCTACA +
Preference number: 5 (lower is better)
Translates to: CDMHPVKSINLPQQSPHRPGNSP*TKSCST
Trigger: TGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGG...TCTGTGTGGTGACTGCTGAGGAAGGTTTATGGATTTGACAGGGTGCATGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3
CDS-3UTR CAA 90 bp TCAGTGTCCTGCTGTGAAACTGTTAAAGCCACCCATCCTATGAAACTCACTCCTGCAAGATTCACATTCTaGGAAAAGCAGAGGAATGCG +
Preference number: 5 (lower is better)
Translates to: SVSCCETVKATHPMKLTPARFTF*EKQRNA
Trigger: CGCATTCCTCTGCTTTTCCAAGAATGTGAATCTTGC...AGGAGTGAGTTTCATAGGATGGGTGGCTTTAACAGTTTCACAGCAGGACACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503143.3