RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCAKD (Homo sapiens)

Ensembl gene IDs: ENSG00000172992

Ensembl transcript IDs: ENST00000310604.8, ENST00000342350.9, ENST00000452796.6, ENST00000588295.1, ENST00000588499.5, ENST00000592902.5, ENST00000593094.1, ENST00000614054.4, ENST00000651974.1

Found 505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCTACGTGGGGAGAGGGGTCTCCCAGAAGAGGCTGGTCCTGCCTaGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTTGCTGGCA +
Preference number: 1 (lower is better)
Translates to: TLRGERGLPEEAGPA*LQRYPRENPCCLLA
Trigger: TGCCAGCAAGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGACCCCTCTCCCCACGTAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR GCA 90 bp ACAAACCCTACGTGGGGAGAGGGGTCTCCCAGAAGAGGCTGGTCCTaGCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTTGCT +
Preference number: 1 (lower is better)
Translates to: TNPTWGEGSPRRGWS*LATALPTRESLLLA
Trigger: AGCAAGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGACCCCTCTCCCCACGTAGGGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR CCA 90 bp CACTACACAAACCCTACGTGGGGAGAGGGGTCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTG +
Preference number: 1 (lower is better)
Translates to: HYTNPTWGEGSPRRG*SCLATALPTRESLL
Trigger: CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR CCA 90 bp TGGCAGGCAATAAGCAGGATGTGGGAGCACTACACAAACCCTACGTaGGGAGAGGGGTCTCCCAGAAGAGGCTGGTCCTGCCTGGCTACA +
Preference number: 1 (lower is better)
Translates to: WQAISRMWEHYTNPT*GEGSPRRGWSCLAT
Trigger: TGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTAGTGCTCCCACATCCTGCTTATTGCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR GCA 90 bp ATTCCCTACCCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTaGTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: IPYPHPQKCIAVSDC*FHTPSRLLFCRCCS
Trigger: TGAGCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGGGTAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTCTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCLQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTACAGAGGCCCAGCCCTaGTTCGGAGAGTCCGTGTGT +
Preference number: 2 (lower is better)
Translates to: KRLVLPGYSVTHERILAATEAQP*FGESVC
Trigger: ACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTCTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: KRLVLPGYSVTHERILAALQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: RRGWSCLATALPTRESLLLQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: RRGWSCLATALPTRESLLSPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCGGCAGCAAGCCATACTaGGGGGCCTGGGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSGSKPY*GAWAFS
Trigger: ACTGAAGGCCCAGGCCCCCCAGTATGGCTTGCTGCC...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCACAGAGGCCCAGCCCTaGTTCGGAGAGTCCGTGTGT +
Preference number: 2 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSTEAQP*FGESVC
Trigger: ACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGT...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTATTGGCCTCCCAGCTCTaGGGAGGGCCACAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLLASQL*GGPQSQ
Trigger: CTGGCTCTGTGGCCCTCCTCAGAGCTGGGAGGCCAA...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSSPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGGGCAGCAAGCCATACTaGGGGGCCTGGGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: ETARMVYTEYQEVQARSRGSKPY*GAWAFS
Trigger: ACTGAAGGCCCAGGCCCCCCAGTATGGCTTGCTGCC...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCGAGGCTGGTCCTGCCTaGCTACAGCGTTACCCACGA +
Preference number: 2 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSEAGPA*LQRYPR
Trigger: TCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTC...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTTTGGCCTCCCAGCTCTaGGGAGGGCCACAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGLASQL*GGPQSQ
Trigger: CTGGCTCTGTGGCCCTCCTCAGAGCTGGGAGGCCAA...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRLQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: ETARMVYTEYQEVQARSRSPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRSPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGTCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCG +
Preference number: 2 (lower is better)
Translates to: ETARMVYTEYQEVQARSRSPRRG*SCLATA
Trigger: CGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGA...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTTTTCCCGTGGTCCACTaGGGAGGTTTAGGCCACAAT +
Preference number: 2 (lower is better)
Translates to: QKRLVLPGYSVTHERILAFPVVH*GGLGHN
Trigger: ATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAA...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGTTTCCCGTGGTCCACTaGGGAGGTTTAGGCCACAAT +
Preference number: 2 (lower is better)
Translates to: RRGWSCLATALPTRESLLFPVVH*GGLGHN
Trigger: ATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAA...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCCTGTTCTGTAGGTGCTaGTCAGGGAAGGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSLFCRC*SGKVGR
Trigger: CCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAG...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGTTGCTGTTCTGTAGGTaGTGCTCAGGGAAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: RRGWSCLATALPTRESLLLLFCR*CSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAA...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCCCACGAGAGAATCCTTaGTGCTTGCTGGCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSPRENP*CLLAAS
Trigger: GCTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGG...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCACTCCAAAGACGGGATaGCCTGGCACAGAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCTPKTG*PGTEAQ
Trigger: CTGGGCCTCTGTGCCAGGCCATCCCGTCTTTGGAGT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAGGCGAGAAGCAGGGGTaGCAGGCAATAAGCAGGATG +
Preference number: 2 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRGEKQG*QAISRM
Trigger: CATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTACAGAGGCCCAGCCCTaGTTCGGAGAGTCCGTGTGT +
Preference number: 2 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGTEAQP*FGESVC
Trigger: ACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGT...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAAGGATTCAAGCCCAGTaGACCCTTGGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLRIQAQ*TLGLPA
Trigger: AGCTGGGAGGCCAAGGGTTCACTGGGCTTGAATCCT...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACCAGGAGCAGCAGGTTaGAGGCACAGAGGCAAGAAA +
Preference number: 2 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRPGAAG*RHRGKK
Trigger: TTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGACAGGATGTGTTACCTaGCTTCAGCCTCCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: RRGWSCLATALPTRESLLTGCVT*LQPPRR
Trigger: TCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGT...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAATCCTTGCTGCTTGCTaGCAGCAAGCCATACTGGGG +
Preference number: 2 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRILAAC*QQAILG
Trigger: CCCCAGTATGGCTTGCTGCCAGCAAGCAGCAAGGAT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGTACACAAACCCTACGTaGGGAGAGGGGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: ETARMVYTEYQEVQARSRYTNPT*GEGSPR
Trigger: TCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTA...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTACTGTTCTGTAGGTGCTaGTCAGGGAAGGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLLFCRC*SGKVGR
Trigger: CCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAG...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCGCAGTCTCTGACTGTTaGTTTCACACACCATCACGG +
Preference number: 2 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSAVSDC*FHTPSR
Trigger: CCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGC...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAACTCCAAAGACGGGATaGCCTGGCACAGAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSTPKTG*PGTEAQ
Trigger: CTGGGCCTCTGTGCCAGGCCATCCCGTCTTTGGAGT...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGATCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCG +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRSPRRG*SCLATA
Trigger: CGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGA...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGGCGAGAAGCAGGGGTaGCAGGCAATAAGCAGGATG +
Preference number: 2 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGGEKQG*QAISRM
Trigger: CATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACC +
Preference number: 2 (lower is better)
Translates to: KRLVLPGYSVTHERILAAMYSSL*LLLSHT
Trigger: GGTGTGTGAAAGCAACAGTCAGAGACTGCTATACAT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAAGGATTCAAGCCCAGTaGACCCTTGGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRRIQAQ*TLGLPA
Trigger: AGCTGGGAGGCCAAGGGTTCACTGGGCTTGAATCCT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTATTGCTGTTCTGTAGGTaGTGCTCAGGGAAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLLLFCR*CSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAA...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTTACACAAACCCTACGTaGGGAGAGGGGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGYTNPT*GEGSPR
Trigger: TCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTA...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAGCAGTCTCTGACTGTTaGTTTCACACACCATCACGG +
Preference number: 2 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLAVSDC*FHTPSR
Trigger: CCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGC...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR CAA 90 bp AAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCACGGTaGCTGTTCTGTAGGTGCTGCTCAGGGAAGGTGGGAAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: KCIAVSDCCFHTPSR*LFCRCCSGKVGRTA
Trigger: TGCTGTCCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTCAGCAGGCTATTTCTTaGTCTCAAATAGGATACACT +
Preference number: 2 (lower is better)
Translates to: KRLVLPGYSVTHERILAAQQAIS*SQIGYT
Trigger: AGTGTATCCTATTTGAGATCAAGAAATAGCCTGCTG...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACC +
Preference number: 2 (lower is better)
Translates to: ETARMVYTEYQEVQARSRMYSSL*LLLSHT
Trigger: GGTGTGTGAAAGCAACAGTCAGAGACTGCTATACAT...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACACCAGGAGCAGCAGGTTaGAGGCACAGAGGCAAGAAA +
Preference number: 2 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTPGAAG*RHRGKK
Trigger: TTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGG...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGATTGCTGTTCTGTAGGTaGTGCTCAGGGAAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRLLFCR*CSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAA...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTACACACCATCACGGTTaGTGTTCTGTAGGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGTHHHG*CSVGAA
Trigger: AGCAGCACCTACAGAACAGCAACCGTGATGGTGTGT...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTAGGTTTAGGCCACAATaGGGTAGGTGCTTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGRFRPQ*GRCLER
Trigger: CCTCTCTAAGCACCTACCCCATTGTGGCCTAAACCT...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACC +
Preference number: 2 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLMYSSL*LLLSHT
Trigger: GGTGTGTGAAAGCAACAGTCAGAGACTGCTATACAT...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAAGGGGAGGGCCTTGTTaGCTGTTTGAACATGGAAAC +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRRGGPC*LFEHGN
Trigger: GTTTCCATGTTCAAACAGTCAACAAGGCCCTCCCCT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAACACACCATCACGGTTaGTGTTCTGTAGGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRTHHHG*CSVGAA
Trigger: AGCAGCACCTACAGAACAGCAACCGTGATGGTGTGT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAAGGTTTAGGCCACAATaGGGTAGGTGCTTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRRFRPQ*GRCLER
Trigger: CCTCTCTAAGCACCTACCCCATTGTGGCCTAAACCT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAAGGGGAGGGCCTTGTTaGCTGTTTGAACATGGAAAC +
Preference number: 2 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTRGGPC*LFEHGN
Trigger: GTTTCCATGTTCAAACAGTCAACAAGGCCCTCCCCT...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAGCAGTCTCTGACTGTTaGTTTCACACACCATCACGG +
Preference number: 2 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTAVSDC*FHTPSR
Trigger: CCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGC...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR GCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAAGAATCCTTGCTGCTTaGTGGCAGCAAGCCATACTG +
Preference number: 2 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTRILAA*WQQAIL
Trigger: CAGTATGGCTTGCTGCCAGCAAGCAGCAAGGATTCT...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACC +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRMYSSL*LLLSHT
Trigger: GGTGTGTGAAAGCAACAGTCAGAGACTGCTATACAT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGAACATGGAAACCCTTaGTCCAACATGATTTCCCGT +
Preference number: 2 (lower is better)
Translates to: VEGTEARNSKDGVHGIPREHGNP*SNMISR
Trigger: ACGGGAAATCATGTTGGACCAAGGGTTTCCATGTTC...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR TCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCACAGCAGGCTATTTCTTaGTCTCAAATAGGATACACT +
Preference number: 2 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSQQAIS*SQIGYT
Trigger: AGTGTATCCTATTTGAGATCAAGAAATAGCCTGCTG...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR CCA 72 bp GGGGAGAGGGGTCTCCCAGAAGAGGCTGGTCCTGCCTaGCTACAGCGTTACCCACGAGAGAATCCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: GERGLPEEAGPA*LQRYPRENPCC
Trigger: GCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGACCCCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR CCA 72 bp AACCCTACGTGGGGAGAGGGGTCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAA +
Preference number: 3 (lower is better)
Translates to: NPTWGEGSPRRG*SCLATALPTRE
Trigger: TTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGACCCCTCTCCCCACGTAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR CCA 72 bp GGCGAGAAGCAGGGGTGGCAGGCAATAAGCAGGATGTaGGAGCACTACACAAACCCTACGTGGGGAGAGGGG +
Preference number: 3 (lower is better)
Translates to: GEKQGWQAISRM*EHYTNPTWGEG
Trigger: CCCCTCTCCCCACGTAGGGTTTGTGTAGTGCTCCCACATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAGCCAGGAGCAGCAGGTaGAAGGCACAGAGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRARSSR*KAQRQE
Trigger: TTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGC...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACACACACCATCACGGTaGCTGTTCTGTAGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRHTPSR*LFCRCC
Trigger: GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTACACACACCATCACGGTaGCTGTTCTGTAGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLHTPSR*LFCRCC
Trigger: GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTG...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGGCCTTGTTGACTGTTaGAACATGGAAACCCTTGGT +
Preference number: 3 (lower is better)
Translates to: RRGWSCLATALPTRESLLGLVDC*NMETLG
Trigger: ACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGCC...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGCCTTGTTGACTGTTaGAACATGGAAACCCTTGGT +
Preference number: 3 (lower is better)
Translates to: QKRLVLPGYSVTHERILAGLVDC*NMETLG
Trigger: ACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGCC...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR GCA 72 bp CAGTCTCTGACTGTTGCTTTCACACACCATCACGGTTaGTGTTCTGTAGGTGCTGCTCAGGGAAGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: QSLTVAFTHHHG*CSVGAAQGRWE
Trigger: TTCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR TCA 72 bp TCCCTACCCCCACCCACAGAAATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACCATCACGGTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: SLPPPTEMYSSL*LLLSHTITVAV
Trigger: AACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGGGTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR GCA 72 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTaGTTTCACACACCATCACGGTTGCTGTTCTGTAGG +
Preference number: 3 (lower is better)
Translates to: PHPQKCIAVSDC*FHTPSRLLFCR
Trigger: CCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 3 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSTAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 3 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLTAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAGGCCTTGTTGACTGTTaGAACATGGAAACCCTTGGT +
Preference number: 3 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTGLVDC*NMETLG
Trigger: ACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGCC...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR-3UTR CAA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 3 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTTAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTTGGCCTCCCAGCTCTaGGGAGGGCCACAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCLASQL*GGPQSQ
Trigger: CTGGCTCTGTGGCCCTCCTCAGAGCTGGGAGGCCAA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGGACATGGCGGGCCATaGGGGCCTTGTCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCGHGGP*GPCLSG
Trigger: CCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCC...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCAGGCCTGGGGCTCCCTaGCTTGAGTGCCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCRPGAP*LECPTR
Trigger: CCTAGTGGGGCACTCAAGGCAGGGAGCCCCAGGCCT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCSTMRR*AGYPGC
Trigger: GCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGGCAGCAAGCCATACTaGGGGGCCTGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCGSKPY*GAWAFS
Trigger: ACTGAAGGCCCAGGCCCCCCAGTATGGCTTGCTGCC...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCCAGCGCCTCCGCCGTaGCCCAGGCCTCCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDPAPPP*PRPPPL
Trigger: TAGAGGCGGAGGCCTGGGCCACGGCGGAGGCGCTGG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588499.5
ENST00000651974.1
CDS-3UTR TCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILAGAAGH*CGPLRP
Trigger: AGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCC...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLGAAGH*CGPLRP
Trigger: AGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCC...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAAGAAGH*CGPLRP
Trigger: AGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCC...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGGGACATGGCGGGCCATaGGGGCCTTGTCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVGHGGP*GPCLSG
Trigger: CCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCC...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCAGTGCCAGAAGGACCTaGTTGGGAGAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCSARRT*LGEASG
Trigger: CCCGCTGGCCTCTCCCAAGCAGGTCCTTCTGGCACT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGACCAGCGCCTCCGCCGTaGCCCAGGCCTCCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRPAPPP*PRPPPL
Trigger: TAGAGGCGGAGGCCTGGGCCACGGCGGAGGCGCTGG...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588499.5
ENST00000651974.1
CDS-3UTR CCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGACTAGGCCGCGAAATTaGGTCGCCCGGGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLTRPRN*VARGGG
Trigger: GCCACCGCCCCGGGCGACCCAATTTCGCGGCCTAGT...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTACTAGGCCGCGAAATTaGGTCGCCCGGGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILATRPRN*VARGGG
Trigger: GCCACCGCCCCGGGCGACCCAATTTCGCGGCCTAGT...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSGAAGH*CGPLRP
Trigger: AGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCC...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTTTGGCCTCCCAGCTCTaGGGAGGGCCACAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILALASQL*GGPQSQ
Trigger: CTGGCTCTGTGGCCCTCCTCAGAGCTGGGAGGCCAA...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTAGGATTCAAGCCCAGTaGACCCTTGGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCRIQAQ*TLGLPA
Trigger: AGCTGGGAGGCCAAGGGTTCACTGGGCTTGAATCCT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCGAAGACCTCTACGATaGGCCGGTGGGCAGGGTATC +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCRRPLR*AGGQGI
Trigger: GATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCG...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCATGGCGTTGAGCAGCTaGCGCCGGTCAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCMALSS*RRSGWL
Trigger: TAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCAT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGGCCTCTGCGTCCTTaGGGTTCAGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILAGPLRP*GSGCSA
Trigger: GGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCC...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTATTGATGCGGGCCTCTaGGTCCTTGCGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCIDAGL*VLAVQA
Trigger: AGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAAT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGACATGGCGGGCCATaGGGGCCTTGTCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILAGHGGP*GPCLSG
Trigger: CCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCC...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILAGKCGR*GRSTRG
Trigger: TCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCC...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGTGGGCAGGGTATCCTaGCTGCACGACGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGVGRVS*LHDVPG
Trigger: GCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCAC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCTGCCGCCGGTCAGGCTaGTTAAAGATCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCCRRSG*LKIRSP
Trigger: GGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCA...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTTGCGAATCTCGGGGTaGGTGATGGCGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCLRISG*VMALSS
Trigger: GCTGCTCAACGCCATCACCCACCCCGAGATTCGCAA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGATCTCACCGGCCCGCGTaGCGCGCTACGTACCCAGCG +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRSHRPA*RATYPA
Trigger: CGCTGGGTACGTAGCGCGCCACGCGGGCCGGTGAGA...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651974.1
CDS-3UTR TCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRGAAGH*CGPLRP
Trigger: AGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATTTGGCCTCCCAGCTCTaGGGAGGGCCACAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDLASQL*GGPQSQ
Trigger: CTGGCTCTGTGGCCCTCCTCAGAGCTGGGAGGCCAA...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCGGGAGGGACATGTCCTaGGCTTGGGGTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSGRDMS*AWGALG
Trigger: CCCCAGAGCACCCCAAGCTCAGGACATGTCCCTCCC...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCGAAGACCTCTACGATaGGCCGGTGGGCAGGGTATC +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVRRPLR*AGGQGI
Trigger: GATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTCCAGCAAGACCTCAGTaGCGAAGACCTCTACGATGC +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCPARPQ*RRPLRC
Trigger: GCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGG...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGATGGCGTTGAGCAGCTaGCGCCGGTCAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVMALSS*RRSGWL
Trigger: TAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCAT...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCGGGCCTCTGCGTCCTTaGGGTTCAGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSGPLRP*GSGCSA
Trigger: GGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCC...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGGACATGGCGGGCCATaGGGGCCTTGTCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGGHGGP*GPCLSG
Trigger: CCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGAGGCCTGGGGCTCCCTaGCTTGAGTGCCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGRPGAP*LECPTR
Trigger: CCTAGTGGGGCACTCAAGGCAGGGAGCCCCAGGCCT...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCAGGCCTGGGGCTCCCTaGCTTGAGTGCCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSRPGAP*LECPTR
Trigger: CCTAGTGGGGCACTCAAGGCAGGGAGCCCCAGGCCT...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTCTGTTCTGTAGGTGCTaGTCAGGGAAGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCLFCRC*SGKVGR
Trigger: CCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAG...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTCCACGAGAGAATCCTTaGTGCTTGCTGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCPRENP*CLLAAS
Trigger: GCTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGG...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCGCACAGCCCAGCTGCTaGAACACCTGGATCACTGAG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCAQPSC*NTWITE
Trigger: CTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGC...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGGTGGGCAGGGTATCCTaGCTGCACGACGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ETARMVYTEYQEVQARSRVGRVS*LHDVPG
Trigger: GCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCAC...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCAGGGGCAGCTaGGCATTGATGCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVSVRGS*ALMRAS
Trigger: AGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGA...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTATCCTTGCTGCTTGCTaGCAGCAAGCCATACTGGGG +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCILAAC*QQAILG
Trigger: CCCCAGTATGGCTTGCTGCCAGCAAGCAGCAAGGAT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTACACAAACCCTACGTaGGGAGAGGGGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCYTNPT*GEGSPR
Trigger: TCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCGGCGAGAAGCAGGGGTaGCAGGCAATAAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCGEKQG*QAISRM
Trigger: CATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGAGGATTCAAGCCCAGTaGACCCTTGGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVRIQAQ*TLGLPA
Trigger: AGCTGGGAGGCCAAGGGTTCACTGGGCTTGAATCCT...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGTCTTGCCTGAGGCAATaGCCCCTGTCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLSCLRQ*PLSGPP
Trigger: TGGTGGGCCTGACAGGGGGCATTGCCTCAGGCAAGA...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTCGAAGACCTCTACGATaGGCCGGTGGGCAGGGTATC +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILARRPLR*AGGQGI
Trigger: GATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCG...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCCAGCAAGACCTCAGTaGCGAAGACCTCTACGATGC +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCPARPQ*RRPLRC
Trigger: GCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGG...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCGGTCCCCCAGGACCTTaGGATTTATGTCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCGPPGP*DLCRRS
Trigger: AGAACGGCGACATAAATCGCAAGGTCCTGGGGGACC...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAGGGCCTCTGCGTCCTTaGGGTTCAGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRGPLRP*GSGCSA
Trigger: GGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCC...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGGGCCTCTGCGTCCTTaGGGTTCAGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRGPLRP*GSGCSA
Trigger: GGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAAGGCCTGGGGCTCCCTaGCTTGAGTGCCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRRPGAP*LECPTR
Trigger: CCTAGTGGGGCACTCAAGGCAGGGAGCCCCAGGCCT...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCTGTTCTGTAGGTGCTaGTCAGGGAAGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCLFCRC*SGKVGR
Trigger: CCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAG...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTTGCTGTTCTGTAGGTaGTGCTCAGGGAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCLLFCR*CSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGAGAAGAGGCTGGTCCTaGCTGGCTACAGCGTTACCC +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVRRGWS*LATALP
Trigger: GGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCAGCGGGCCAGGCTCTaGACTAAGAACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCQRARL*TKNTEM
Trigger: CATCTCTGTGTTCTTAGTGCAGAGCCTGGCCCGCTG...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRGKCGR*GRSTRG
Trigger: TCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCC...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRGKCGR*GRSTRG
Trigger: TCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGGCACAGCCCAGCTGCTaGAACACCTGGATCACTGAG +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVAQPSC*NTWITE
Trigger: CTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGC...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAGTGGGCAGGGTATCCTaGCTGCACGACGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLVGRVS*LHDVPG
Trigger: GCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCAC...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGTCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGSTMRR*AGYPGC
Trigger: GCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGA...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGTGCCGCCGGTCAGGCTaGTTAAAGATCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLCRRSG*LKIRSP
Trigger: GGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCA...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTTCTGTCAGGGGCAGCTaGGCATTGATGCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILASVRGS*ALMRAS
Trigger: AGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGA...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTGAGTTGTCTAGGACATaGCGGGCCATGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAAELSRT*RAMRAL
Trigger: CAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTC...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTGCAAGAGGATGACCTaGCGTTTGGTGACACTCCAC +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCCKRMT*RLVTLH
Trigger: GTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGCAGGTAGAGGAGGCTaGCAATGGCAGCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGAGRGG*QWQRAL
Trigger: CAGGGCTCGCTGCCATTGCCAGCCTCCTCTACCTGC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTCTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILALQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTACTCCAAAGACGGGATaGCCTGGCACAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAATPKTG*PGTEAQ
Trigger: CTGGGCCTCTGTGCCAGGCCATCCCGTCTTTGGAGT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAASPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCATCCTTGCTGCTTGCTaGCAGCAAGCCATACTGGGG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCILAAC*QQAILG
Trigger: CCCCAGTATGGCTTGCTGCCAGCAAGCAGCAAGGAT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGACAGAGGCCCAGCCCTaGTTCGGAGAGTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGTEAQP*FGESVC
Trigger: ACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGT...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATTTGGCCTCCCAGCTCTaGGGAGGGCCACAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDLASQL*GGPQSQ
Trigger: CTGGCTCTGTGGCCCTCCTCAGAGCTGGGAGGCCAA...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTAGGGGAGGGCCTTGTTaGCTGTTTGAACATGGAAAC +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCRGGPC*LFEHGN
Trigger: GTTTCCATGTTCAAACAGTCAACAAGGCCCTCCCCT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCCAGGAGCAGCAGGTTaGAGGCACAGAGGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVPGAAG*RHRGKK
Trigger: TTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCGGTCCCACCAACCTTaGGCCCCTTCTTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVRSHQP*APSFLK
Trigger: TTTGAGGAAAGAAGGGGCGCAAGGTTGGTGGGACCG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310604.8
CDS-3UTR GCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCGAAGACCTCTACGATaGGCCGGTGGGCAGGGTATC +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDRRPLR*AGGQGI
Trigger: GATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATATGGCGTTGAGCAGCTaGCGCCGGTCAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDMALSS*RRSGWL
Trigger: TAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCAT...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGGCCTCTGCGTCCTTaGGGTTCAGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDGPLRP*GSGCSA
Trigger: GGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCC...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATGCTCCCTGCCTTGAGTaGCCCACTAGGCGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDAPCLE*PTRRKA
Trigger: TGCCTTACGCCTAGTGGGGCACTCAAGGCAGGGAGC...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCAGGCCTGGGGCTCCCTaGCTTGAGTGCCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCRPGAP*LECPTR
Trigger: CCTAGTGGGGCACTCAAGGCAGGGAGCCCCAGGCCT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCTGTTCTGTAGGTGCTaGTCAGGGAAGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVLFCRC*SGKVGR
Trigger: CCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGCAGTCTCTGACTGTTaGTTTCACACACCATCACGG +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCAVSDC*FHTPSR
Trigger: CCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGC...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTAGAATCCTTGCTGCTTaGTGGCAGCAAGCCATACTG +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCRILAA*WQQAIL
Trigger: CAGTATGGCTTGCTGCCAGCAAGCAGCAAGGATTCT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCCACGAGAGAATCCTTaGTGCTTGCTGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVPRENP*CLLAAS
Trigger: GCTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGGTCCACCAGAGGAGTaGCAGAAGGACCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRGPPEE*QKDPAP
Trigger: AGGCGCTGGGTCCTTCTGGCACTCCTCTGGTGGACC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588499.5
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDGKCGR*GRSTRG
Trigger: TCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCC...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCELQNH*RAGQVW
Trigger: CCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTC...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCAGCTGCTGGAACACCTaGATCACTGAGCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCSCWNT*ITELLP
Trigger: AGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGCACAGCCCAGCTGCTaGAACACCTGGATCACTGAG +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLAQPSC*NTWITE
Trigger: CTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGC...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTGCACAGCCCAGCTGCTaGAACACCTGGATCACTGAG +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAAAQPSC*NTWITE
Trigger: CTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGC...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGTCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ETARMVYTEYQEVQARSRSTMRR*AGYPGC
Trigger: GCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGA...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRSTMRR*AGYPGC
Trigger: GCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGA...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGTGCCGCCGGTCAGGCTaGTTAAAGATCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGCRRSG*LKIRSP
Trigger: GGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCA...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCTGCAAGAGGATGACCTaGCGTTTGGTGACACTCCAC +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCCKRMT*RLVTLH
Trigger: GTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCA...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAGCAGGTAGAGGAGGCTaGCAATGGCAGCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRAGRGG*QWQRAL
Trigger: CAGGGCTCGCTGCCATTGCCAGCCTCCTCTACCTGC...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGCAGGTAGAGGAGGCTaGCAATGGCAGCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRAGRGG*QWQRAL
Trigger: CAGGGCTCGCTGCCATTGCCAGCCTCCTCTACCTGC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGLQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDLQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTACAGGATGTGTTACCTaGCTTCAGCCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCTGCVT*LQPPRR
Trigger: TCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGACTCCAAAGACGGGATaGCCTGGCACAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGTPKTG*PGTEAQ
Trigger: CTGGGCCTCTGTGCCAGGCCATCCCGTCTTTGGAGT...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCTCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCG +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSSPRRG*SCLATA
Trigger: CGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGA...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATTCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCG +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDSPRRG*SCLATA
Trigger: CGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGA...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTGGCGAGAAGCAGGGGTaGCAGGCAATAAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAAGEKQG*QAISRM
Trigger: CATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRGAAGH*CGPLRP
Trigger: AGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCC...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAACAGAGGCCCAGCCCTaGTTCGGAGAGTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRTEAQP*FGESVC
Trigger: ACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCAGGATTCAAGCCCAGTaGACCCTTGGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSRIQAQ*TLGLPA
Trigger: AGCTGGGAGGCCAAGGGTTCACTGGGCTTGAATCCT...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCAGGGGAGGGCCTTGTTaGCTGTTTGAACATGGAAAC +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCRGGPC*LFEHGN
Trigger: GTTTCCATGTTCAAACAGTCAACAAGGCCCTCCCCT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGGTCCCCCAGGACCTTaGGATTTATGTCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLGPPGP*DLCRRS
Trigger: AGAACGGCGACATAAATCGCAAGGTCCTGGGGGACC...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAATGGCGTTGAGCAGCTaGCGCCGGTCAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRMALSS*RRSGWL
Trigger: TAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCAT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGATTGATGCGGGCCTCTaGGTCCTTGCGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGIDAGL*VLAVQA
Trigger: AGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAAT...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCATTGATGCGGGCCTCTaGGTCCTTGCGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSIDAGL*VLAVQA
Trigger: AGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAAT...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGGACATGGCGGGCCATaGGGGCCTTGTCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGGHGGP*GPCLSG
Trigger: CCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAGCTCCCTGCCTTGAGTaGCCCACTAGGCGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRAPCLE*PTRRKA
Trigger: TGCCTTACGCCTAGTGGGGCACTCAAGGCAGGGAGC...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTGTTCTGTAGGTaGTGCTCAGGGAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVLLFCR*CSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAA...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCACACACCATCACGGTTaGTGTTCTGTAGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCTHHHG*CSVGAA
Trigger: AGCAGCACCTACAGAACAGCAACCGTGATGGTGTGT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCAGAATCCTTGCTGCTTaGTGGCAGCAAGCCATACTG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCRILAA*WQQAIL
Trigger: CAGTATGGCTTGCTGCCAGCAAGCAGCAAGGATTCT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGAGAAGAGGCTGGTCCTaGCTGGCTACAGCGTTACCC +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGRRGWS*LATALP
Trigger: GGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAAGAGGCTGGTCCTaGCTGGCTACAGCGTTACCC +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDRRGWS*LATALP
Trigger: GGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTCAGCGGGCCAGGCTCTaGACTAAGAACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILAQRARL*TKNTEM
Trigger: CATCTCTGTGTTCTTAGTGCAGAGCCTGGCCCGCTG...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGGTCCACCAGAGGAGTaGCAGAAGGACCTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLGPPEE*QKDLSA
Trigger: AGCACTAAGGTCCTTCTGGCACTCCTCTGGTGGACC...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGGKCGR*GRSTRG
Trigger: TCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVELQNH*RAGQVW
Trigger: CCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTC...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGCACAGCCCAGCTGCTaGAACACCTGGATCACTGAG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGAQPSC*NTWITE
Trigger: CTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGTGGGCAGGGTATCCTaGCTGCACGACGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSVGRVS*LHDVPG
Trigger: GCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCAC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATTCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDSTMRR*AGYPGC
Trigger: GCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGA...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATTTGCGAATCTCGGGGTaGGTGATGGCGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDLRISG*VMALSS
Trigger: GCTGCTCAACGCCATCACCCACCCCGAGATTCGCAA...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATCTGTCAGGGGCAGCTaGGCATTGATGCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRSVRGS*ALMRAS
Trigger: AGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGA...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGGAGTTGTCTAGGACATaGCGGGCCATGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ETARMVYTEYQEVQARSRELSRT*RAMRAL
Trigger: CAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTC...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAGCAGGTAGAGGAGGCTaGCAATGGCAGCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLAGRGG*QWQRAL
Trigger: CAGGGCTCGCTGCCATTGCCAGCCTCCTCTACCTGC...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGACTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRLQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAACTCCAAAGACGGGATaGCCTGGCACAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRTPKTG*PGTEAQ
Trigger: CTGGGCCTCTGTGCCAGGCCATCCCGTCTTTGGAGT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCAGGTTTAGGCCACAATaGGGTAGGTGCTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCRFRPQ*GRCLER
Trigger: CCTCTCTAAGCACCTACCCCATTGTGGCCTAAACCT...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGCAGCAAGCCATACTaGGGGGCCTGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDGSKPY*GAWAFS
Trigger: ACTGAAGGCCCAGGCCCCCCAGTATGGCTTGCTGCC...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAGGCAGCAAGCCATACTaGGGGGCCTGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLGSKPY*GAWAFS
Trigger: ACTGAAGGCCCAGGCCCCCCAGTATGGCTTGCTGCC...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGAGGCTGGTCCTGCCTaGCTACAGCGTTACCCACGA +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDREAGPA*LQRYPR
Trigger: TCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGATCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCG +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRSPRRG*SCLATA
Trigger: CGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGA...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCGGCGAGAAGCAGGGGTaGCAGGCAATAAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSGEKQG*QAISRM
Trigger: CATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGGCGAGAAGCAGGGGTaGCAGGCAATAAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGGEKQG*QAISRM
Trigger: CATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCACAGAGGCCCAGCCCTaGTTCGGAGAGTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCTEAQP*FGESVC
Trigger: ACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCMYSSL*LLLSHT
Trigger: GGTGTGTGAAAGCAACAGTCAGAGACTGCTATACAT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAAGGATTCAAGCCCAGTaGACCCTTGGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRRIQAQ*TLGLPA
Trigger: AGCTGGGAGGCCAAGGGTTCACTGGGCTTGAATCCT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCGCCTTGTTGACTGTTTaGACATGGAAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCALLTV*TWKPLV
Trigger: GACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGC...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCCCAGGAGCAGCAGGTTaGAGGCACAGAGGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSPGAAG*RHRGKK
Trigger: TTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGG...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCTCTTGCCTGAGGCAATaGCCCCTGTCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCSCLRQ*PLSGPP
Trigger: TGGTGGGCCTGACAGGGGGCATTGCCTCAGGCAAGA...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCCAGCAAGACCTCAGTaGCGAAGACCTCTACGATGC +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDPARPQ*RRPLRC
Trigger: GCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCCCAGCAAGACCTCAGTaGCGAAGACCTCTACGATGC +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSPARPQ*RRPLRC
Trigger: GCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGG...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCCAGCAAGACCTCAGTaGCGAAGACCTCTACGATGC +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGPARPQ*RRPLRC
Trigger: GCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGG...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATGGTCCCCCAGGACCTTaGGATTTATGTCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDGPPGP*DLCRRS
Trigger: AGAACGGCGACATAAATCGCAAGGTCCTGGGGGACC...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATATGGCGTTGAGCAGCTaGCGCCGGTCAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDMALSS*RRSGWL
Trigger: TAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCAT...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGGCCTCTGCGTCCTTaGGGTTCAGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRGPLRP*GSGCSA
Trigger: GGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCC...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGGACATGGCGGGCCATaGGGGCCTTGTCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSGHGGP*GPCLSG
Trigger: CCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCGCTCCCTGCCTTGAGTaGCCCACTAGGCGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCAPCLE*PTRRKA
Trigger: TGCCTTACGCCTAGTGGGGCACTCAAGGCAGGGAGC...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTGTTCTGTAGGTGCTaGTCAGGGAAGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGLFCRC*SGKVGR
Trigger: CCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAG...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAGTGGGCAGGGTATCCTaGCTGCACGACGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTVGRVS*LHDVPG
Trigger: GCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCAC...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCTGCCGCCGGTCAGGCTaGTTAAAGATCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCCRRSG*LKIRSP
Trigger: GGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCA...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGAGTTGTCTAGGACATaGCGGGCCATGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDELSRT*RAMRAL
Trigger: CAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTC...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTTGCAAGAGGATGACCTaGCGTTTGGTGACACTCCAC +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAACKRMT*RLVTLH
Trigger: GTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCA...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCCTCCAAGGAGATAGATaGAGGCCTGGGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCLQGDR*RPGAPC
Trigger: GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAG...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDSPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCSPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGAACATGGAAACCCTTaGTCCAACATGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCEHGNP*SNMISR
Trigger: ACGGGAAATCATGTTGGACCAAGGGTTTCCATGTTC...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGAGGCTGGTCCTGCCTaGCTACAGCGTTACCCACGA +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDEAGPA*LQRYPR
Trigger: TCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTC...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCTCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCG +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCSPRRG*SCLATA
Trigger: CGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGA...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCTACACAAACCCTACGTaGGGAGAGGGGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSYTNPT*GEGSPR
Trigger: TCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTA...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGGCGAGAAGCAGGGGTaGCAGGCAATAAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRGEKQG*QAISRM
Trigger: CATCCTGCTTATTGCCTGCCACCCCTGCTTCTCGCC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTGGCAAGGGCAGGCTaGAATCAAACCTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLLARAG*NQTSDF
Trigger: AAAATCCGAGGTTTGATTTCAGCCTGCCCTTGCCAG...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310604.8
ENST00000342350.9
CDS-3UTR TCA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTGTGCTTCATGTACTTaGGCAACTTCTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCCASCT*ATSWSQ
Trigger: TTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCAGGATTCAAGCCCAGTaGACCCTTGGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCRIQAQ*TLGLPA
Trigger: AGCTGGGAGGCCAAGGGTTCACTGGGCTTGAATCCT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTTCTTGCCTGAGGCAATaGCCCCTGTCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGSCLRQ*PLSGPP
Trigger: TGGTGGGCCTGACAGGGGGCATTGCCTCAGGCAAGA...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCGAAGACCTCTACGATaGGCCGGTGGGCAGGGTATC +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGRRPLR*AGGQGI
Trigger: GATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCG...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGGTCCCCCAGGACCTTaGGATTTATGTCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRGPPGP*DLCRRS
Trigger: AGAACGGCGACATAAATCGCAAGGTCCTGGGGGACC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCATTGATGCGGGCCTCTaGGTCCTTGCGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCIDAGL*VLAVQA
Trigger: AGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAAT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGTTGCTGTTCTGTAGGTaGTGCTCAGGGAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGLLFCR*CSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAA...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTACACACCATCACGGTTaGTGTTCTGTAGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAATHHHG*CSVGAA
Trigger: AGCAGCACCTACAGAACAGCAACCGTGATGGTGTGT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCAGTCTCTGACTGTTaGTTTCACACACCATCACGG +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILAAVSDC*FHTPSR
Trigger: CCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGC...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACCACGAGAGAATCCTTaGTGCTTGCTGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRPRENP*CLLAAS
Trigger: GCTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAAGAAGAGGCTGGTCCTaGCTGGCTACAGCGTTACCC +
Preference number: 4 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLRRGWS*LATALP
Trigger: GGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACAGCGGGCCAGGCTCTaGACTAAGAACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRQRARL*TKNTEM
Trigger: CATCTCTGTGTTCTTAGTGCAGAGCCTGGCCCGCTG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGAGCTGCTGGAACACCTaGATCACTGAGCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGSCWNT*ITELLP
Trigger: AGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCT...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCATCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSSTMRR*AGYPGC
Trigger: GCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGA...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCTTGCGAATCTCGGGGTaGGTGATGGCGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCLRISG*VMALSS
Trigger: GCTGCTCAACGCCATCACCCACCCCGAGATTCGCAA...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTTCTGTCAGGGGCAGCTaGGCATTGATGCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGSVRGS*ALMRAS
Trigger: AGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGA...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGAGTTGTCTAGGACATaGCGGGCCATGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGELSRT*RAMRAL
Trigger: CAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCTGCAAGAGGATGACCTaGCGTTTGGTGACACTCCAC +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSCKRMT*RLVTLH
Trigger: GTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCA...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTACTCCAAAGACGGGATaGCCTGGCACAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGTPKTG*PGTEAQ
Trigger: CTGGGCCTCTGTGCCAGGCCATCCCGTCTTTGGAGT...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTAGGTTTAGGCCACAATaGGGTAGGTGCTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILARFRPQ*GRCLER
Trigger: CCTCTCTAAGCACCTACCCCATTGTGGCCTAAACCT...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTAGGTTTAGGCCACAATaGGGTAGGTGCTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAARFRPQ*GRCLER
Trigger: CCTCTCTAAGCACCTACCCCATTGTGGCCTAAACCT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGAGGCTGGTCCTGCCTaGCTACAGCGTTACCCACGA +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGEAGPA*LQRYPR
Trigger: TCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
3UTR CAA 72 bp GCAGTCTCTGACTGTTGCTTTCACACACCATCACGGTaGCTGTTCTGTAGGTGCTGCTCAGGGAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AVSDCCFHTPSR*LFCRCCSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTATGGAACCTCCACGCCTaGAACCCTAAACCAGCATCG +
Preference number: 4 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLWNLHA*NPKPAS
Trigger: CGATGCTGGTTTAGGGTTTCAGGCGTGGAGGTTCCA...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310604.8
ENST00000342350.9
CDS-3UTR TCA 90 bp AAAGGTATCCCAGGCCAGGAGCAGCAGGTTGAAGGCACAGAGGCAAGAAACAGCCTGGCAAGGGCAGGCTaGAATCAAACCTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: KGIPGQEQQVEGTEARNSLARAG*NQTSDF
Trigger: AAAATCCGAGGTTTGATTTCAGCCTGCCCTTGCCAG...GCTGTTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGCCTGGGATACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310604.8
ENST00000342350.9
CDS-3UTR TCA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCCCGGAGGAAGTACTTaGACGTCTCCTTCATCATCT +
Preference number: 4 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDPGGST*TSPSSS
Trigger: AGATGATGAAGGAGACGTTCAAGTACTTCCTCCGGG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATTTCCCGTGGTCCACTaGGGAGGTTTAGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRFPVVH*GGLGHN
Trigger: ATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAA...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAGGTCCACCAGAGGAGTaGCAGAAGGACCTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTGPPEE*QKDLPG
Trigger: TCCCGGCAGGTCCTTCTGGCACTCCTCTGGTGGACC...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310604.8
CDS-3UTR GCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGCTCCCTGCCTTGAGTaGCCCACTAGGCGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSAPCLE*PTRRKA
Trigger: TGCCTTACGCCTAGTGGGGCACTCAAGGCAGGGAGC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGCAGTCTCTGACTGTTaGTTTCACACACCATCACGG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGAVSDC*FHTPSR
Trigger: CCGTGATGGTGTGTGAAAGCAACAGTCAGAGACTGC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGAGAATCCTTGCTGCTTaGTGGCAGCAAGCCATACTG +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGRILAA*WQQAIL
Trigger: CAGTATGGCTTGCTGCCAGCAAGCAGCAAGGATTCT...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCCCACGAGAGAATCCTTaGTGCTTGCTGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCPRENP*CLLAAS
Trigger: GCTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGG...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTTTGCGAATCTCGGGGTaGGTGATGGCGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGLRISG*VMALSS
Trigger: GCTGCTCAACGCCATCACCCACCCCGAGATTCGCAA...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGAGTTGTCTAGGACATaGCGGGCCATGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSELSRT*RAMRAL
Trigger: CAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGCAAGAGGATGACCTaGCGTTTGGTGACACTCCAC +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRCKRMT*RLVTLH
Trigger: GTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCA...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAAGCCCAGTGAACCCTTaGCCTCCCAGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSSPVNP*PPSSEE
Trigger: CTCCTCAGAGCTGGGAGGCCAAGGGTTCACTGGGCT...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATATCCTTGCTGCTTGCTaGCAGCAAGCCATACTGGGG +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDILAAC*QQAILG
Trigger: CCCCAGTATGGCTTGCTGCCAGCAAGCAGCAAGGAT...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGAGGCTGGTCCTGCCTaGCTACAGCGTTACCCACGA +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSEAGPA*LQRYPR
Trigger: TCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCATCTCCCAGAAGAGGCTaGTCCTGCCTGGCTACAGCG +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSSPRRG*SCLATA
Trigger: CGCTGTAGCCAGGCAGGACCAGCCTCTTCTGGGAGA...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGGGAGACAGCTTGGCTaGGGAGGGACATGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSGRQLG*GGTCPE
Trigger: CTCAGGACATGTCCCTCCCCAGCCAAGCTGTCTCCC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR CCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACACCAGAAGGACCTGCTTaGGAGAGGCCAGCGGGACTG +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTPEGPA*ERPAGL
Trigger: CAGTCCCGCTGGCCTCTCCCAAGCAGGTCCTTCTGG...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR TCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTTGGAACCTCCACGCCTaGAACCCTAAACCAGCATCG +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGWNLHA*NPKPAS
Trigger: CGATGCTGGTTTAGGGTTTCAGGCGTGGAGGTTCCA...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310604.8
ENST00000342350.9
CDS-3UTR TCA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: QKRLVLPGYSVTHERILAMYSSL*LLLSHT
Trigger: GGTGTGTGAAAGCAACAGTCAGAGACTGCTATACAT...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCTTTCCCGTGGTCCACTaGGGAGGTTTAGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCFPVVH*GGLGHN
Trigger: ATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAA...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATTTTCCCGTGGTCCACTaGGGAGGTTTAGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDFPVVH*GGLGHN
Trigger: ATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAA...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAAGGGGAGGGCCTTGTTaGCTGTTTGAACATGGAAAC +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRRGGPC*LFEHGN
Trigger: GTTTCCATGTTCAAACAGTCAACAAGGCCCTCCCCT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGGTCCCCCAGGACCTTaGGATTTATGTCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGGPPGP*DLCRRS
Trigger: AGAACGGCGACATAAATCGCAAGGTCCTGGGGGACC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAATTGATGCGGGCCTCTaGGTCCTTGCGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSIDAGL*VLAVQA
Trigger: AGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAAT...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAGCTCCCTGCCTTGAGTaGCCCACTAGGCGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTAPCLE*PTRRKA
Trigger: TGCCTTACGCCTAGTGGGGCACTCAAGGCAGGGAGC...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAAGAATCCTTGCTGCTTaGTGGCAGCAAGCCATACTG +
Preference number: 4 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRRILAA*WQQAIL
Trigger: CAGTATGGCTTGCTGCCAGCAAGCAGCAAGGATTCT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAAGAAGAGGCTGGTCCTaGCTGGCTACAGCGTTACCC +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRRRGWS*LATALP
Trigger: GGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCAGCGGGCCAGGCTCTaGACTAAGAACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGQRARL*TKNTEM
Trigger: CATCTCTGTGTTCTTAGTGCAGAGCCTGGCCCGCTG...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAGTCCTGAGCTTGGGGTaGTCTGGGGCCATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTVLSLG*SGAIWR
Trigger: TCTCCAGATGGCCCCAGAGCACCCCAAGCTCAGGAC...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDELQNH*RAGQVW
Trigger: CCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTC...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCAGCTGCTGGAACACCTaGATCACTGAGCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCSCWNT*ITELLP
Trigger: AGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATAGCTGCTGGAACACCTaGATCACTGAGCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDSCWNT*ITELLP
Trigger: AGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCT...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGCACAGCCCAGCTGCTaGAACACCTGGATCACTGAG +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRAQPSC*NTWITE
Trigger: CTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGC...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACATGCCGCCGGTCAGGCTaGTTAAAGATCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTCRRSG*LKIRSP
Trigger: GGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCA...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCATTGCGAATCTCGGGGTaGGTGATGGCGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSLRISG*VMALSS
Trigger: GCTGCTCAACGCCATCACCCACCCCGAGATTCGCAA...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAACAGGATGTGTTACCTaGCTTCAGCCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRTGCVT*LQPPRR
Trigger: TCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGT...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGACAGGATGTGTTACCTaGCTTCAGCCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ETARMVYTEYQEVQARSRTGCVT*LQPPRR
Trigger: TCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGT...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGAGGTTTAGGCCACAATaGGGTAGGTGCTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ETARMVYTEYQEVQARSRRFRPQ*GRCLER
Trigger: CCTCTCTAAGCACCTACCCCATTGTGGCCTAAACCT...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAAGGTTTAGGCCACAATaGGGTAGGTGCTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRRFRPQ*GRCLER
Trigger: CCTCTCTAAGCACCTACCCCATTGTGGCCTAAACCT...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTGAACATGGAAACCCTTaGTCCAACATGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: KRLVLPGYSVTHERILAAEHGNP*SNMISR
Trigger: ACGGGAAATCATGTTGGACCAAGGGTTTCCATGTTC...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTATCCTTGCTGCTTGCTaGCAGCAAGCCATACTGGGG +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGILAAC*QQAILG
Trigger: CCCCAGTATGGCTTGCTGCCAGCAAGCAGCAAGGAT...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGTGTGCTTCATGTACTTaGGCAACTTCTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: RRGWSCLATALPTRESLLCASCT*ATSWSQ
Trigger: TTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACA...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGACCAGGAGCAGCAGGTTaGAGGCACAGAGGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRPGAAG*RHRGKK
Trigger: TTTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGG...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAATTGATGCGGGCCTCTaGGTCCTTGCGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTIDAGL*VLAVQA
Trigger: AGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAAT...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGACTGTTCTGTAGGTGCTaGTCAGGGAAGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRLFCRC*SGKVGR
Trigger: CCTTCCCACCTTCCCTGAGCAGCACCTACAGAACAG...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCACACACCATCACGGTTaGTGTTCTGTAGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCTHHHG*CSVGAA
Trigger: AGCAGCACCTACAGAACAGCAACCGTGATGGTGTGT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGACCACGAGAGAATCCTTaGTGCTTGCTGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRPRENP*CLLAAS
Trigger: GCTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGG...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGELQNH*RAGQVW
Trigger: CCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCACAGGATGTGTTACCTaGCTTCAGCCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCTGCVT*LQPPRR
Trigger: TCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATACAGGATGTGTTACCTaGCTTCAGCCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRGNRMCYLASASKEIDTGCVT*LQPPRR
Trigger: TCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGT...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGATACACAAACCCTACGTaGGGAGAGGGGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRYTNPT*GEGSPR
Trigger: TCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTA...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGTGTGCTTCATGTACTTaGGCAACTTCTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: NRMCYLASASKEIDGGLGCASCT*ATSWSQ
Trigger: TTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACA...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAGCCTTGTTGACTGTTTaGACATGGAAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLALLTV*TWKPLV
Trigger: GACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGC...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAAGAGGCCAGCGGGACTaGTCAGTTTGGGCCAAAATA +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSRGQRD*SVWAKI
Trigger: TATTTTGGCCCAAACTGATCAGTCCCGCTGGCCTCT...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR GCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAGGTCCCCCAGGACCTTaGGATTTATGTCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTGPPGP*DLCRRS
Trigger: AGAACGGCGACATAAATCGCAAGGTCCTGGGGGACC...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCATTGCTGTTCTGTAGGTaGTGCTCAGGGAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSLLFCR*CSGKVG
Trigger: TCCCACCTTCCCTGAGCAGCACCTACAGAACAGCAA...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRELQNH*RAGQVW
Trigger: CCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTC...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSELQNH*RAGQVW
Trigger: CCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGATGCAAGAGGATGACCTaGCGTTTGGTGACACTCCAC +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRCKRMT*RLVTLH
Trigger: GTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCA...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGAACATGGAAACCCTTaGTCCAACATGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GAERKQDVLPGFSLQGDREHGNP*SNMISR
Trigger: ACGGGAAATCATGTTGGACCAAGGGTTTCCATGTTC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACATACACAAACCCTACGTaGGGAGAGGGGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTYTNPT*GEGSPR
Trigger: TCTGGGAGACCCCTCTCCCCACGTAGGGTTTGTGTA...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGTGTGCTTCATGTACTTaGGCAACTTCTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ETARMVYTEYQEVQARSRCASCT*ATSWSQ
Trigger: TTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACA...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCATGTATAGCAGTCTCTaGCTGTTGCTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCMYSSL*LLLSHT
Trigger: GGTGTGTGAAAGCAACAGTCAGAGACTGCTATACAT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGCCTTGTTGACTGTTTaGACATGGAAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGALLTV*TWKPLV
Trigger: GACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAAGGGGAGGGCCTTGTTaGCTGTTTGAACATGGAAAC +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSRGGPC*LFEHGN
Trigger: GTTTCCATGTTCAAACAGTCAACAAGGCCCTCCCCT...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR GCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAAGAATCCTTGCTGCTTaGTGGCAGCAAGCCATACTG +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRRILAA*WQQAIL
Trigger: CAGTATGGCTTGCTGCCAGCAAGCAGCAAGGATTCT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGCCTTGTTGACTGTTTaGACATGGAAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSALLTV*TWKPLV
Trigger: GACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAACAGGATGTGTTACCTaGCTTCAGCCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTTGCVT*LQPPRR
Trigger: TCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGT...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGAACATGGAAACCCTTaGTCCAACATGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGEHGNP*SNMISR
Trigger: ACGGGAAATCATGTTGGACCAAGGGTTTCCATGTTC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCCAGCAGGCTATTTCTTaGTCTCAAATAGGATACACT +
Preference number: 4 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCQQAIS*SQIGYT
Trigger: AGTGTATCCTATTTGAGATCAAGAAATAGCCTGCTG...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CCA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGAACATGGAAACCCTTaGTCCAACATGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSEHGNP*SNMISR
Trigger: ACGGGAAATCATGTTGGACCAAGGGTTTCCATGTTC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGATGTGCTTCATGTACTTaGGCAACTTCTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRCASCT*ATSWSQ
Trigger: TTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACA...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR TCA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACACAGCAGGCTATTTCTTaGTCTCAAATAGGATACACT +
Preference number: 4 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTQQAIS*SQIGYT
Trigger: AGTGTATCCTATTTGAGATCAAGAAATAGCCTGCTG...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp TCTCACCGGCCCGCGTGGCGCGCTACGTACCCAGCGCCTCCGCCGTaGCCCAGGCCTCCGCCTCTAGCCCAATCTCCGCAGCGCTTACAG +
Preference number: 5 (lower is better)
Translates to: SHRPAWRATYPAPPP*PRPPPLAQSPQRLQ
Trigger: CTGTAAGCGCTGCGGAGATTGGGCTAGAGGCGGAGGCCTGGGCCACGGCGGAGGCGCTGGGTACGTAGCGCGCCACGCGGGCCGGTGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593094.1
ENST00000651974.1
CDS TCA 90 bp CATGGCGGGCCATGCGGGCCTTGTCTGTCAGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCTTGCGGTTCAGGCTGTTCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: HGGPCGPCLSGAAGH*CGPLRPCGSGCSAA
Trigger: TGCGGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCGCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp GCGGGCCTTGTCTGTCAGGGGCAGCTGGGCATTGATGCGGGCCTCTaGGTCCTTGCGGTTCAGGCTGTTCCGCCGCATCAGCCGTGCCAG +
Preference number: 5 (lower is better)
Translates to: AGLVCQGQLGIDAGL*VLAVQAVPPHQPCQ
Trigger: CTGGCACGGCTGATGCGGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAAGGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp TGTCGCCGTTCTCCAGCAAGACCTCAGTGCCGAAGACCTCTACGATaGGCCGGTGGGCAGGGTATCCTGGCTGCACGACGTGCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: CRRSPARPQCRRPLR*AGGQGILAARRAGP
Trigger: TGGCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGGAGAACGGCGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp GCCAGGAGCTACAGAATCACTGGAGAGCAGGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCCAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ARSYRITGEQGKCGR*GRSTRGVPEGPSAS
Trigger: GGAGGCGCTGGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588295.1
ENST00000588499.5
CDS-3UTR CAA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTCGGGCCTCTGCGTCCTaGCGGTTCAGGCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCRASAS*RFRLFR
Trigger: GCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCG...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCGGGCCATGCGGGCCTaGTCTGTCAGGGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCRAMRA*SVRGSW
Trigger: CCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCG...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp TTCTCCAGCAAGACCTCAGTGCCGAAGACCTCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGCACGACGTGCCGGGCCATCACGTCC +
Preference number: 5 (lower is better)
Translates to: FSSKTSVPKTSTMRR*AGYPGCTTCRAITS
Trigger: GGACGTGATGGCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCGGGCCATGCGGGCCTaGTCTGTCAGGGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVRAMRA*SVRGSW
Trigger: CCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp GGCCTCTGCGTCCTTGCGGTTCAGGCTGTTCCGCCGCATCAGCCGTaGCAGCTGTGTGTCCCGGTCGCAGTATACTACCACGGTGTGCTT +
Preference number: 5 (lower is better)
Translates to: GLCVLAVQAVPPHQP*QLCVPVAVYYHGVL
Trigger: AAGCACACCGTGGTAGTATACTGCGACCGGGACACACAGCTGGCACGGCTGATGCGGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp GAGAGCAGGGCAAGTGTGGCCGATGGGGGCGGTCCACCAGAGGAGTaGCAGAAGGACCTTAGTGCTGGCCGCATACGACGCGCTCAATAC +
Preference number: 5 (lower is better)
Translates to: ESRASVADGGGPPEE*QKDLSAGRIRRAQY
Trigger: GTATTGAGCGCGTCGTATGCGGCCAGCACTAAGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp GCCAGGAGCTACAGAATCACTGGAGAGCAGGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCTGCCGGGAAA +
Preference number: 5 (lower is better)
Translates to: ARSYRITGEQGKCGR*GRSTRGVPEGPAGK
Trigger: TTTCCCGGCAGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310604.8
CDS CCA 90 bp AGAGAGCTGTCCGCGAGACTACGGAGCCAGGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGGCCGATGGGGGCGGTCCACCAGAGG +
Preference number: 5 (lower is better)
Translates to: RELSARLRSQELQNH*RAGQVWPMGAVHQR
Trigger: CCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTCCTGGCTCCGTAGTCTCGCGGACAGCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp ACCTGGCGTTTGGTGACACTCCACTCGCCCGAGTTGTCTAGGACATaGCGGGCCATGCGGGCCTTGTCTGTCAGGGGCAGCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: TWRLVTLHSPELSRT*RAMRALSVRGSWAL
Trigger: CAATGCCCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAGTGTCACCAAACGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp GCCAGGAGCTACAGAATCACTGGAGAGCAGGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCCGGGAAACGT +
Preference number: 5 (lower is better)
Translates to: ARSYRITGEQGKCGR*GRSTRGVPEGPGKR
Trigger: ACGTTTCCCGGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342350.9
CDS CCA 90 bp GCCAGGAGCTACAGAATCACTGGAGAGCAGGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: ARSYRITGEQGKCGR*GRSTRGVPEGPAWE
Trigger: CTCCCAAGCAGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGAGGGGCAGCTGGGCATaGATGCGGGCCTCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVRGSWA*MRASAS
Trigger: GGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCT...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTCGGGCCATGCGGGCCTaGTCTGTCAGGGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KRLVLPGYSVTHERILAARAMRA*SVRGSW
Trigger: CCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCG...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCTCCACTCGCCCGAGTaGTCTAGGACATGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCLHSPE*SRTWRA
Trigger: GGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAG...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp ACGTGCCGGGCCATCACGTCCACGTCAATCACCGCACAGCCCAGCTaGTGGAACACCTGGATCACTGAGCTCTTGCCTGAGGCAATGCCC +
Preference number: 5 (lower is better)
Translates to: TCRAITSTSITAQPS*WNTWITELLPEAMP
Trigger: GGGCATTGCCTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGCGGTGATTGACGTGGACGTGATGGCCCGGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp CCAAACCTCAGCGGCAGGTACTCCAGGGAGCGCTCCAGCTCAGTGTaGAAGAGGATGACCTGGCGTTTGGTGACACTCCACTCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: PNLSGRYSRERSSSV*KRMTWRLVTLHSPE
Trigger: CTCGGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCACACTGAGCTGGAGCGCTCCCTGGAGTACCTGCCGCTGAGGTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTCGGGCCTCTGCGTCCTaGCGGTTCAGGCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: QKRLVLPGYSVTHERILARASAS*RFRLFR
Trigger: GCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCG...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCGGGCCATGCGGGCCTaGTCTGTCAGGGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDRAMRA*SVRGSW
Trigger: CCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCTCCACTCGCCCGAGTaGTCTAGGACATGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVLHSPE*SRTWRA
Trigger: GGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTAGGATGACCTGGCGTTaGGTGACACTCCACTCGCCC +
Preference number: 5 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCRMTWR*VTLHSP
Trigger: GGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCT...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp ATCACGTCCACGTCAATCACCGCACAGCCCAGCTGCTGGAACACCTaGATCACTGAGCTCTTGCCTGAGGCAATGCCCCCTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ITSTSITAQPSCWNT*ITELLPEAMPPVRP
Trigger: GGGCCTGACAGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGCGGTGATTGACGTGGACGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp GGCCGATGGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCTGCTTaGGAGAGGCCAGCGGGACTGATCAGTTTGGGCCAAAATAATTGG +
Preference number: 5 (lower is better)
Translates to: GRWGRSTRGVPEGPA*ERPAGLISLGQNNW
Trigger: CCAATTATTTTGGCCCAAACTGATCAGTCCCGCTGGCCTCTCCCAAGCAGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR CAA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGGGTGGGTGATGGCGTaGAGCAGCTGCCGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: NRMCYLASASKEIDGGLGGWVMA*SSCRRS
Trigger: TGACCGGCGGCAGCTGCTCAACGCCATCACCCACCC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATGGGTGGGTGATGGCGTaGAGCAGCTGCCGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDGWVMA*SSCRRS
Trigger: TGACCGGCGGCAGCTGCTCAACGCCATCACCCACCC...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCGGGCCTCTGCGTCCTaGCGGTTCAGGCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: NRMCYLASASKEIDGGLGRASAS*RFRLFR
Trigger: GCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCG...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGGGGCAGCTGGGCATaGATGCGGGCCTCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDRGSWA*MRASAS
Trigger: GGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCT...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTCTCCACTCGCCCGAGTaGTCTAGGACATGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: KRLVLPGYSVTHERILAALHSPE*SRTWRA
Trigger: GGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAG...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTGGGGCTCCCTGCCTaGAGTGCCCCACTAGGCGTA +
Preference number: 5 (lower is better)
Translates to: RRGWSCLATALPTRESLLLGLPA*SAPLGV
Trigger: TACGCCTAGTGGGGCACTCAAGGCAGGGAGCCCCAG...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp TCACCGCACAGCCCAGCTGCTGGAACACCTGGATCACTGAGCTCTTaGCTGAGGCAATGCCCCCTGTCAGGCCCACCAGAAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: SPHSPAAGTPGSLSS*LRQCPLSGPPETSS
Trigger: GGAAGATGTTTCTGGTGGGCCTGACAGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGCGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp CCAGGACCTTGCGATTTATGTCGCCGTTCTCCAGCAAGACCTCAGTaGCGAAGACCTCTACGATGCGCCGGTGGGCAGGGTATCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PGPCDLCRRSPARPQ*RRPLRCAGGQGILA
Trigger: AGCCAGGATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGGAGAACGGCGACATAAATCGCAAGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp ATCATCTCCTTGCGAATCTCGGGGTGGGTGATGGCGTTGAGCAGCTaGCGCCGGTCAGGCTGGTTAAAGATCAGGTCCCCCAGGACCTTG +
Preference number: 5 (lower is better)
Translates to: IISLRISGWVMALSS*RRSGWLKIRSPRTL
Trigger: CAAGGTCCTGGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCATCACCCACCCCGAGATTCGCAAGGAGATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGGGTGGGTGATGGCGTaGAGCAGCTGCCGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRGWVMA*SSCRRS
Trigger: TGACCGGCGGCAGCTGCTCAACGCCATCACCCACCC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGCCTGGCACAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTTCCTTCATCATCTCCTaGCGAATCTCGGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GLAQRPSPDSESPCVCVCSFIIS*RISGWV
Trigger: CACCCACCCCGAGATTCGCAAGGAGATGATGAAGGA...ACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTGTGCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACGGGCCTCTGCGTCCTaGCGGTTCAGGCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRRASAS*RFRLFR
Trigger: GCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATCGGGCCATGCGGGCCTaGTCTGTCAGGGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLRGNRMCYLASASKEIDRAMRA*SVRGSW
Trigger: CCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCG...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCACTCGCCCGAGTaGTCTAGGACATGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: NRMCYLASASKEIDGGLGLHSPE*SRTWRA
Trigger: GGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAG...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCTGGGGCTCCCTGCCTaGAGTGCCCCACTAGGCGTA +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDLGLPA*SAPLGV
Trigger: TACGCCTAGTGGGGCACTCAAGGCAGGGAGCCCCAG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTGGGGCTCCCTGCCTaGAGTGCCCCACTAGGCGTA +
Preference number: 5 (lower is better)
Translates to: NRMCYLASASKEIDGGLGLGLPA*SAPLGV
Trigger: TACGCCTAGTGGGGCACTCAAGGCAGGGAGCCCCAG...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp AGGTACTCCAGGGAGCGCTCCAGCTCAGTGTGCAAGAGGATGACCTaGCGTTTGGTGACACTCCACTCGCCCGAGTTGTCTAGGACATGG +
Preference number: 5 (lower is better)
Translates to: RYSRERSSSVCKRMT*RLVTLHSPELSRTW
Trigger: CCATGTCCTAGACAACTCGGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCACACTGAGCTGGAGCGCTCCCTGGAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGGTGGGTGATGGCGTaGAGCAGCTGCCGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GLRGNRMCYLASASKEIDGWVMA*SSCRRS
Trigger: TGACCGGCGGCAGCTGCTCAACGCCATCACCCACCC...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATAGGGGCAGCTGGGCATaGATGCGGGCCTCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: GLRGNRMCYLASASKEIDRGSWA*MRASAS
Trigger: GGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCT...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACTCCACTCGCCCGAGTaGTCTAGGACATGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRLHSPE*SRTWRA
Trigger: GGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTAGGATGACCTGGCGTTaGGTGACACTCCACTCGCCC +
Preference number: 5 (lower is better)
Translates to: KRLVLPGYSVTHERILAARMTWR*VTLHSP
Trigger: GGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGACTGGGGCTCCCTGCCTaGAGTGCCCCACTAGGCGTA +
Preference number: 5 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRLGLPA*SAPLGV
Trigger: TACGCCTAGTGGGGCACTCAAGGCAGGGAGCCCCAG...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCACACACCATCACGGTaGCTGTTCTGTAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCHTPSR*LFCRCC
Trigger: GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTG...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGCCCACGAGAGAATCCTaGCTGCTTGCTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVPTRES*LLAGSK
Trigger: CTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGGG...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS GCA 90 bp CCAGCTGCTGGAACACCTGGATCACTGAGCTCTTGCCTGAGGCAATaGCCCCTGTCAGGCCCACCAGAAACATCTTCCAGGAAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PAAGTPGSLSSCLRQ*PLSGPPETSSRKES
Trigger: GCTCTCTTTCCTGGAAGATGTTTCTGGTGGGCCTGACAGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp AATTGGGAGAGAGGAGGCAAAGGAAGTAAAGGGAGACAGCTTGGCTaGGGAGGGACATGTCCTGAGCTTGGGGTGCTCTGGGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: NWERGGKGSKGRQLG*GGTCPELGVLWGHL
Trigger: CAGATGGCCCCAGAGCACCCCAAGCTCAGGACATGTCCCTCCCCAGCCAAGCTGTCTCCCTTTACTTCCTTTGCCTCCTCTCTCCCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS-3UTR CAA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTTGGATCACTGAGCTCTaGCCTGAGGCAATGCCCCCT +
Preference number: 5 (lower is better)
Translates to: KRLVLPGYSVTHERILAAWITEL*PEAMPP
Trigger: AGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCA...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTCATCATCTCCTaGCGAATCTCGGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVSFIIS*RISGWV
Trigger: CACCCACCCCGAGATTCGCAAGGAGATGATGAAGGA...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGGATGACCTGGCGTTaGGTGACACTCCACTCGCCC +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDRMTWR*VTLHSP
Trigger: GGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCT...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGGCCAGGAGCAGCAGGTaGAAGGCACAGAGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: RRGWSCLATALPTRESLLARSSR*KAQRQE
Trigger: TTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGC...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGGGTGGGTGATGGCGTaGAGCAGCTGCCGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSGWVMA*SSCRRS
Trigger: TGACCGGCGGCAGCTGCTCAACGCCATCACCCACCC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCTACTTGAGCAACTTCTaGGTCTCAAACAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: VLPGFSLQGDRWRPGAPCYLSNF*VSNSRG
Trigger: CCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTA...GCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAAGGGGCAGCTGGGCATaGATGCGGGCCTCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRRGSWA*MRASAS
Trigger: GGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGAGGATGACCTGGCGTTaGGTGACACTCCACTCGCCC +
Preference number: 5 (lower is better)
Translates to: ETARMVYTEYQEVQARSRRMTWR*VTLHSP
Trigger: GGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCT...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTCACACACCATCACGGTaGCTGTTCTGTAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QKRLVLPGYSVTHERILAHTPSR*LFCRCC
Trigger: GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTG...AGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCCCACGAGAGAATCCTaGCTGCTTGCTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDPTRES*LLAGSK
Trigger: CTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGGG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp AAGTACTTGAACGTCTCCTTCATCATCTCCTTGCGAATCTCGGGGTaGGTGATGGCGTTGAGCAGCTGCCGCCGGTCAGGCTGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: KYLNVSFIISLRISG*VMALSSCRRSGWLK
Trigger: CTTTAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCATCACCCACCCCGAGATTCGCAAGGAGATGATGAAGGAGACGTTCAAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTC +
Preference number: 5 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRRSPRT*RFMSPF
Trigger: GAACGGCGACATAAATCGCAAGGTCCTGGGGGACCT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTC +
Preference number: 5 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRRSPRT*RFMSPF
Trigger: GAACGGCGACATAAATCGCAAGGTCCTGGGGGACCT...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGTCCTTCATCATCTCCTaGCGAATCTCGGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: NRMCYLASASKEIDGGLGSFIIS*RISGWV
Trigger: CACCCACCCCGAGATTCGCAAGGAGATGATGAAGGA...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGTACTTGAGCAACTTCTaGGTCTCAAACAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVYLSNF*VSNSRG
Trigger: CCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTA...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACACGGGCCTCTGCGTCCTaGCGGTTCAGGCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTRASAS*RFRLFR
Trigger: GCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCG...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAAGGGGCAGCTGGGCATaGATGCGGGCCTCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTRGSWA*MRASAS
Trigger: GGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCT...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAAGGATGACCTGGCGTTaGGTGACACTCCACTCGCCC +
Preference number: 5 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLRMTWR*VTLHSP
Trigger: GGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCT...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCACTGGGGCTCCCTGCCTaGAGTGCCCCACTAGGCGTA +
Preference number: 5 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSLGLPA*SAPLGV
Trigger: TACGCCTAGTGGGGCACTCAAGGCAGGGAGCCCCAG...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCACACACCATCACGGTaGCTGTTCTGTAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDHTPSR*LFCRCC
Trigger: GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGACCCACGAGAGAATCCTaGCTGCTTGCTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRPTRES*LLAGSK
Trigger: CTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGGG...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGCCAGAAGGACCTGCTaGGGAGAGGCCAGCGGGACT +
Preference number: 5 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRARRTC*GEASGT
Trigger: AGTCCCGCTGGCCTCTCCCAAGCAGGTCCTTCTGGC...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS GCA 90 bp TCTCTTCTCATTAAACTGTCAGCCTCCTTAAGAGCTGAGGGAACGTaGTTCTTTCCTCTGGGGCTGGTACGGGGCTCCCGGAGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SLLIKLSASLRAEGT*FFPLGLVRGSRRKY
Trigger: GTACTTCCTCCGGGAGCCCCGTACCAGCCCCAGAGGAAAGAAGCACGTTCCCTCAGCTCTTAAGGAGGCTGACAGTTTAATGAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588295.1
ENST00000592902.5
CDS-3UTR CAA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATTGGATCACTGAGCTCTaGCCTGAGGCAATGCCCCCT +
Preference number: 5 (lower is better)
Translates to: GLRGNRMCYLASASKEIDWITEL*PEAMPP
Trigger: AGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCA...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTC +
Preference number: 5 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCRSPRT*RFMSPF
Trigger: GAACGGCGACATAAATCGCAAGGTCCTGGGGGACCT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATCCCCGGAGGAAGTACTaGAACGTCTCCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDPRRKY*NVSFII
Trigger: GATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGG...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTTACTTGAGCAACTTCTaGGTCTCAAACAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: KRLVLPGYSVTHERILAAYLSNF*VSNSRG
Trigger: CCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTA...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGACACACACCATCACGGTaGCTGTTCTGTAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRHTPSR*LFCRCC
Trigger: GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTG...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGGGCCTTGTTGACTGTTaGAACATGGAAACCCTTGGT +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVGLVDC*NMETLG
Trigger: ACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGCC...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATCCCACGAGAGAATCCTaGCTGCTTGCTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: GLRGNRMCYLASASKEIDPTRES*LLAGSK
Trigger: CTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGGG...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTACCCACGAGAGAATCCTaGCTGCTTGCTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLPTRES*LLAGSK
Trigger: CTTGCTGCCAGCAAGCAGCAAGGATTCTCTCGTGGG...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAGCCAGGAGCAGCAGGTaGAAGGCACAGAGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLARSSR*KAQRQE
Trigger: TTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGC...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTTGGATCACTGAGCTCTaGCCTGAGGCAATGCCCCCT +
Preference number: 5 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGWITEL*PEAMPP
Trigger: AGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCA...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGACCCCGGAGGAAGTACTaGAACGTCTCCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRPRRKY*NVSFII
Trigger: GATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGG...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGTACTTGAGCAACTTCTaGGTCTCAAACAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: NRMCYLASASKEIDGGLGYLSNF*VSNSRG
Trigger: CCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTA...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CAGAGGCCCAGCCCTGATTCGGAGAGTCCGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGCTTCATGTACTaGAGCAACTTCTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: QRPSPDSESPCVCVCVCVVCFMY*SNFLVS
Trigger: TGAGACCAAGAAGTTGCTCAAGTACATGAAGCACAC...CACACACACACACACACACACACACGGACTCTCCGAATCAGGGCTGGGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTGCCAGGAGCAGCAGGTaGAAGGCACAGAGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: EGTEARNSKDGVHGIPRGARSSR*KAQRQE
Trigger: TTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGC...ACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTC +
Preference number: 5 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSRSPRT*RFMSPF
Trigger: GAACGGCGACATAAATCGCAAGGTCCTGGGGGACCT...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTC +
Preference number: 5 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRRSPRT*RFMSPF
Trigger: GAACGGCGACATAAATCGCAAGGTCCTGGGGGACCT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATCCCCGGAGGAAGTACTaGAACGTCTCCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: GLRGNRMCYLASASKEIDPRRKY*NVSFII
Trigger: GATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGG...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTACCCCGGAGGAAGTACTaGAACGTCTCCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLPRRKY*NVSFII
Trigger: GATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGG...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATACTTGAGCAACTTCTaGGTCTCAAACAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRYLSNF*VSNSRG
Trigger: CCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTA...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCAGCCAGGAGCAGCAGGTaGAAGGCACAGAGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSARSSR*KAQRQE
Trigger: TTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGC...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAGCCAGGAGCAGCAGGTaGAAGGCACAGAGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRARSSR*KAQRQE
Trigger: TTCTTGCCTCTGTGCCTTCAACCTGCTGCTCCTGGC...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGGCGGGACTGATCAGTTaGGGCCAAAATAATTGGGAG +
Preference number: 5 (lower is better)
Translates to: ETARMVYTEYQEVQARSRAGLIS*GQNNWE
Trigger: CTCCCAATTATTTTGGCCCAAACTGATCAGTCCCGC...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS TCA 90 bp AAGGGCAGGCTGAAATCAAACCTCGGATTTTGGAACCTCCACGCCTaGAACCCTAAACCAGCATCGAACTACAACTCCCATCATGCCAGG +
Preference number: 5 (lower is better)
Translates to: KGRLKSNLGFWNLHA*NPKPASNYNSHHAR
Trigger: CCTGGCATGATGGGAGTTGTAGTTCGATGCTGGTTTAGGGTTTCAGGCGTGGAGGTTCCAAAATCCGAGGTTTGATTTCAGCCTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310604.8
CDS-3UTR CAA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACAAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTC +
Preference number: 5 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTRSPRT*RFMSPF
Trigger: GAACGGCGACATAAATCGCAAGGTCCTGGGGGACCT...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCTACTTGAGCAACTTCTaGGTCTCAAACAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCYLSNF*VSNSRG
Trigger: CCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTA...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAGGGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATGTGTGCTTCATGTACTaGAGCAACTTCTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: EGAERKQDVLPGFSLQGDVCFMY*SNFLVS
Trigger: TGAGACCAAGAAGTTGCTCAAGTACATGAAGCACAC...ATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGGTGTGCTTCATGTACTaGAGCAACTTCTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: NRMCYLASASKEIDGGLGVCFMY*SNFLVS
Trigger: TGAGACCAAGAAGTTGCTCAAGTACATGAAGCACAC...CCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp CCCCACCCACAGAAATGTATAGCAGTCTCTGACTGTTGCTTTCACACACCATCACACACACCATCACGGTaGCTGTTCTGTAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PHPQKCIAVSDCCFHTPSHTPSR*LFCRCC
Trigger: GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTG...TGATGGTGTGTGAAAGCAACAGTCAGAGACTGCTATACATTTCTGTGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS TCA 90 bp GTGTGTCCCGGTCGCAGTATACTACCACGGTGTGCTTCATGTACTTaGGCAACTTCTTGGTCTCAAACAGCAGGGGGATATCCAGAATCA +
Preference number: 5 (lower is better)
Translates to: VCPGRSILPRCASCT*ATSWSQTAGGYPES
Trigger: TGATTCTGGATATCCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACACCGTGGTAGTATACTGCGACCGGGACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCATCAAACCTCGGATTTaGGAACCTCCACGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCIKPRI*EPPRLK
Trigger: TTTCAGGCGTGGAGGTTCCAAAATCCGAGGTTTGAT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310604.8
ENST00000342350.9
CDS-3UTR CAA 90 bp GGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGATATCAAACCTCGGATTTaGGAACCTCCACGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: GLRGNRMCYLASASKEIDIKPRI*EPPRLK
Trigger: TTTCAGGCGTGGAGGTTCCAAAATCCGAGGTTTGAT...ATCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310604.8
ENST00000342350.9
CDS-3UTR CAA 90 bp GGGGCTGAGAGGAAACAGGATGTGTTACCTGGCTTCAGCCTCCAAGGAGATAGAGTGTGCTTCATGTACTaGAGCAACTTCTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: GAERKQDVLPGFSLQGDRVCFMY*SNFLVS
Trigger: TGAGACCAAGAAGTTGCTCAAGTACATGAAGCACAC...TCTATCTCCTTGGAGGCTGAAGCCAGGTAACACATCCTGTTTCCTCTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GAAACAGCAAGGATGGTGTACACGGAATACCAAGAGGTCCAGGCGAGAAGCAGGGTGTGCTTCATGTACTaGAGCAACTTCTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: ETARMVYTEYQEVQARSRVCFMY*SNFLVS
Trigger: TGAGACCAAGAAGTTGCTCAAGTACATGAAGCACAC...CCTGCTTCTCGCCTGGACCTCTTGGTATTCCGTGTACACCATCCTTGCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AGAAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 5 (lower is better)
Translates to: RRGWSCLATALPTRESLLTAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...CAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp AAGAGGCTGGTCCTGCCTGGCTACAGCGTTACCCACGAGAGAATCCTTGCTGCTACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 5 (lower is better)
Translates to: KRLVLPGYSVTHERILAATAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...AGCAGCAAGGATTCTCTCGTGGGTAACGCTGTAGCCAGGCAGGACCAGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGATTTCCCGTGGTCCACTGAGGAGGTTTAGGCCACAATGGGGTAGGTGCTTAGGCCTTGTTGACTGTTaGAACATGGAAACCCTTGGT +
Preference number: 5 (lower is better)
Translates to: MISRGPLRRFRPQWGRCLGLVDC*NMETLG
Trigger: ACCAAGGGTTTCCATGTTCAAACAGTCAACAAGGCC...TAAGCACCTACCCCATTGTGGCCTAAACCTCCTCAGTGGACCACGGGAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GATCAACACACTTTATTAAACACCAACAGCGGGCCAGGCTCTGCACTAAGAACACCCCGGAGGAAGTACTaGAACGTCTCCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: DQHTLLNTNSGPGSALRTPRRKY*NVSFII
Trigger: GATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGG...TGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGGTGTTTAATAAAGTGTGTTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp ATGTTGAGGGGGAGTTGGTATCCTAGACCACCTAACCCAGCCTGGGGCTTTAGAACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 5 (lower is better)
Translates to: MLRGSWYPRPPNPAWGFRTAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...TCTAAAGCCCCAGGCTGGGTTAGGTGGTCTAGGATACCAACTCCCCCTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS-3UTR CAA 90 bp GTCTCTGACTGTTGCTTTCACACACCATCACGGTTGCTGTTCTGTAGGTGCTGCACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 5 (lower is better)
Translates to: VSDCCFHTPSRLLFCRCCTAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...GCAGCACCTACAGAACAGCAACCGTGATGGTGTGTGAAAGCAACAGTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS CCA 90 bp TTACTCCCATCCCTACTAGAAAAACCAACTTACTTCCTGGGCTCATaGCTCGAAAGCCTCATGTGTCTCTTCTCATTAAACTGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: LLPSLLEKPTYFLGS*LESLMCLFSLNCQP
Trigger: AGGCTGACAGTTTAATGAGAAGAGACACATGAGGCTTTCGAGCCATGAGCCCAGGAAGTAAGTTGGTTTTTCTAGTAGGGATGGGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588295.1
CDS-3UTR CAA 90 bp GTTGAAGGCACAGAGGCAAGAAACAGCAAGGATGGTGTACACGGAATACCAAGAACAGCAGGCTATTTCTaGATCTCAAATAGGATACAC +
Preference number: 5 (lower is better)
Translates to: VEGTEARNSKDGVHGIPRTAGYF*ISNRIH
Trigger: GTGTATCCTATTTGAGATCAAGAAATAGCCTGCTGT...TCTTGGTATTCCGTGTACACCATCCTTGCTGTTTCTTGCCTCTGTGCCTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000614054.4
ENST00000651974.1
CDS CCA 72 bp CCCGCGTGGCGCGCTACGTACCCAGCGCCTCCGCCGTaGCCCAGGCCTCCGCCTCTAGCCCAATCTCCGCAG +
Preference number: 6 (lower is better)
Translates to: PAWRATYPAPPP*PRPPPLAQSPQ
Trigger: CTGCGGAGATTGGGCTAGAGGCGGAGGCCTGGGCCACGGCGGAGGCGCTGGGTACGTAGCGCGCCACGCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593094.1
ENST00000651974.1
CDS CCA 72 bp CCAGAGGAGTGCCAGAAGGACCCAGCGCCTCCGCCGTaGCCCAGGCCTCCGCCTCTAGCCCAATCTCCGCAG +
Preference number: 6 (lower is better)
Translates to: PEECQKDPAPPP*PRPPPLAQSPQ
Trigger: CTGCGGAGATTGGGCTAGAGGCGGAGGCCTGGGCCACGGCGGAGGCGCTGGGTCCTTCTGGCACTCCTCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588295.1
ENST00000588499.5
CDS CAA 90 bp ACATGGCGGGCCATGCGGGCCTTGTCTGTCAGGGGCAGCTGGGCATaGATGCGGGCCTCTGCGTCCTTGCGGTTCAGGCTGTTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: TWRAMRALSVRGSWA*MRASASLRFRLFRR
Trigger: GCGGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCGCCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp CTCCACTCGCCCGAGTTGTCTAGGACATGGCGGGCCATGCGGGCCTaGTCTGTCAGGGGCAGCTGGGCATTGATGCGGGCCTCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: LHSPELSRTWRAMRA*SVRGSWALMRASAS
Trigger: GGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 72 bp AAGACCTCAGTGCCGAAGACCTCTACGATGCGCCGGTaGGCAGGGTATCCTGGCTGCACGACGTGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: KTSVPKTSTMRR*AGYPGCTTCRA
Trigger: GGCCCGGCACGTCGTGCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCGGCACTGAGGTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 72 bp GCCATGCGGGCCTTGTCTGTCAGGGGCAGCTGGGCATaGATGCGGGCCTCTGCGTCCTTGCGGTTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: AMRALSVRGSWA*MRASASLRFRL
Trigger: CAGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAAGGCCCGCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 72 bp CCCGAGTTGTCTAGGACATGGCGGGCCATGCGGGCCTaGTCTGTCAGGGGCAGCTGGGCATTGATGCGGGCC +
Preference number: 6 (lower is better)
Translates to: PELSRTWRAMRA*SVRGSWALMRA
Trigger: GGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS TCA 72 bp CCATGCGGGCCTTGTCTGTCAGGGGCAGCTGGGCATTaGTGCGGGCCTCTGCGTCCTTGCGGTTCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: PCGPCLSGAAGH*CGPLRPCGSGC
Trigger: ACAGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAAGGCCCGCATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS TCA 72 bp GCAGGTAGAGGAGGCTGGCAATGGCAGCGAGCCCTGTaGGGACCCCAAACCTCAGCGGCAGGTACTCCAGGG +
Preference number: 6 (lower is better)
Translates to: AGRGGWQWQRAL*GPQTSAAGTPG
Trigger: CCCTGGAGTACCTGCCGCTGAGGTTTGGGGTCCTCACAGGGCTCGCTGCCATTGCCAGCCTCCTCTACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS GCA 72 bp GCAAGTGTGGCCGATGGGGGCGGTCCACCAGAGGAGTaGCAGAAGGACCTTAGTGCTGGCCGCATACGACGC +
Preference number: 6 (lower is better)
Translates to: ASVADGGGPPEE*QKDLSAGRIRR
Trigger: GCGTCGTATGCGGCCAGCACTAAGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp TTGTCTGTCAGGGGCAGCTGGGCATTGATGCGGGCCTCTGCGTCCTaGCGGTTCAGGCTGTTCCGCCGCATCAGCCGTGCCAGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: LSVRGSWALMRASAS*RFRLFRRISRASCV
Trigger: CACACAGCTGGCACGGCTGATGCGGCGGAACAGCCTGAACCGCAAGGACGCAGAGGCCCGCATCAATGCCCAGCTGCCCCTGACAGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 72 bp GCAAGTGTGGCCGATGGGGGCGGTCCACCAGAGGAGTaGCAGAAGGACCTGCCGGGAAACGTAACGGTCCTT +
Preference number: 6 (lower is better)
Translates to: ASVADGGGPPEE*QKDLPGNVTVL
Trigger: AAGGACCGTTACGTTTCCCGGCAGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310604.8
CDS GCA 72 bp ATGGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCTaGTTGGGAGAGGCCAGCGGGACTGATCAGTTTGGG +
Preference number: 6 (lower is better)
Translates to: MGAVHQRSARRT*LGEASGTDQFG
Trigger: CCCAAACTGATCAGTCCCGCTGGCCTCTCCCAAGCAGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS CCA 72 bp TCCGCGAGACTACGGAGCCAGGAGCTACAGAATCACTaGAGAGCAGGGCAAGTGTGGCCGATGGGGGCGGTC +
Preference number: 6 (lower is better)
Translates to: SARLRSQELQNH*RAGQVWPMGAV
Trigger: GACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTAGCTCCTGGCTCCGTAGTCTCGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 72 bp TTGGTGACACTCCACTCGCCCGAGTTGTCTAGGACATaGCGGGCCATGCGGGCCTTGTCTGTCAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LVTLHSPELSRT*RAMRALSVRGS
Trigger: GCTGCCCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAGTGTCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp TGCAAGAGGATGACCTGGCGTTTGGTGACACTCCACTCGCCCGAGTaGTCTAGGACATGGCGGGCCATGCGGGCCTTGTCTGTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: CKRMTWRLVTLHSPE*SRTWRAMRALSVRG
Trigger: GCCCCTGACAGACAAGGCCCGCATGGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp TCCAGGGAGCGCTCCAGCTCAGTGTGCAAGAGGATGACCTGGCGTTaGGTGACACTCCACTCGCCCGAGTTGTCTAGGACATGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: SRERSSSVCKRMTWR*VTLHSPELSRTWRA
Trigger: GGCCCGCCATGTCCTAGACAACTCGGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCACACTGAGCTGGAGCGCTCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp CGGGGCTCCCGGAGGAAGTACTTGAACGTCTCCTTCATCATCTCCTaGCGAATCTCGGGGTGGGTGATGGCGTTGAGCAGCTGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: RGSRRKYLNVSFIIS*RISGWVMALSSCRR
Trigger: CCGGCGGCAGCTGCTCAACGCCATCACCCACCCCGAGATTCGCAAGGAGATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGAGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588295.1
ENST00000592902.5
CDS GCA 72 bp TCTCCAGCAAGACCTCAGTGCCGAAGACCTCTACGATaGGCCGGTGGGCAGGGTATCCTGGCTGCACGACGT +
Preference number: 6 (lower is better)
Translates to: SPARPQCRRPLR*AGGQGILAARR
Trigger: ACGTCGTGCAGCCAGGATACCCTGCCCACCGGCGCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 72 bp TTGCGAATCTCGGGGTGGGTGATGGCGTTGAGCAGCTaGCGCCGGTCAGGCTGGTTAAAGATCAGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LRISGWVMALSS*RRSGWLKIRSP
Trigger: GGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCATCACCCACCCCGAGATTCGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 72 bp TACAGAATCACTGGAGAGCAGGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCC +
Preference number: 6 (lower is better)
Translates to: YRITGEQGKCGR*GRSTRGVPEGP
Trigger: GGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342350.9
ENST00000588295.1
ENST00000588499.5
CDS CAA 72 bp CAGCCCAGCTGCTGGAACACCTGGATCACTGAGCTCTaGCCTGAGGCAATGCCCCCTGTCAGGCCCACCAGA +
Preference number: 6 (lower is better)
Translates to: QPSCWNTWITEL*PEAMPPVRPTR
Trigger: TCTGGTGGGCCTGACAGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp GCTTCAGCCTCCAAGGAGATAGATGGAGGCCTGGGGCTCCCTGCCTaGAGTGCCCCACTAGGCGTAAGGCAGAAGGTAGTGGGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: ASASKEIDGGLGLPA*SAPLGVRQKVVGEQ
Trigger: CTGCTCACCCACTACCTTCTGCCTTACGCCTAGTGGGGCACTCAAGGCAGGGAGCCCCAGGCCTCCATCTATCTCCTTGGAGGCTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000614054.4
ENST00000651974.1
CDS CCA 72 bp TACAGAATCACTGGAGAGCAGGGCAAGTGTGGCCGATaGGGGCGGTCCACCAGAGGAGTGCCAGAAGGACCT +
Preference number: 6 (lower is better)
Translates to: YRITGEQGKCGR*GRSTRGVPEGP
Trigger: AGGTCCTTCTGGCACTCCTCTGGTGGACCGCCCCCATCGGCCACACTTGCCCTGCTCTCCAGTGATTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310604.8
ENST00000452796.6
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp GTCTCCTTCATCATCTCCTTGCGAATCTCGGGGTGGGTGATGGCGTaGAGCAGCTGCCGCCGGTCAGGCTGGTTAAAGATCAGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: VSFIISLRISGWVMA*SSCRRSGWLKIRSP
Trigger: GGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCATCACCCACCCCGAGATTCGCAAGGAGATGATGAAGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp CGGTATCCCCGGAGGAAGTACTTGAACGTCTCCTTCATCATCTCCTaGCGAATCTCGGGGTGGGTGATGGCGTTGAGCAGCTGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: RYPRRKYLNVSFIIS*RISGWVMALSSCRR
Trigger: CCGGCGGCAGCTGCTCAACGCCATCACCCACCCCGAGATTCGCAAGGAGATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGGATACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 72 bp GCCATCACGTCCACGTCAATCACCGCACAGCCCAGCTaGTGGAACACCTGGATCACTGAGCTCTTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: AITSTSITAQPS*WNTWITELLPE
Trigger: CTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGCGGTGATTGACGTGGACGTGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 72 bp TGCGATTTATGTCGCCGTTCTCCAGCAAGACCTCAGTaGCGAAGACCTCTACGATGCGCCGGTGGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: CDLCRRSPARPQ*RRPLRCAGGQG
Trigger: ACCCTGCCCACCGGCGCATCGTAGAGGTCTTCGGCACTGAGGTCTTGCTGGAGAACGGCGACATAAATCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 72 bp ACGTCAATCACCGCACAGCCCAGCTGCTGGAACACCTaGATCACTGAGCTCTTGCCTGAGGCAATGCCCCCT +
Preference number: 6 (lower is better)
Translates to: TSITAQPSCWNT*ITELLPEAMPP
Trigger: AGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGCGGTGATTGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CCA 72 bp AGGGAGCGCTCCAGCTCAGTGTGCAAGAGGATGACCTaGCGTTTGGTGACACTCCACTCGCCCGAGTTGTCT +
Preference number: 6 (lower is better)
Translates to: RERSSSVCKRMT*RLVTLHSPELS
Trigger: AGACAACTCGGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCACACTGAGCTGGAGCGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp ATCACCGCACAGCCCAGCTGCTGGAACACCTGGATCACTGAGCTCTaGCCTGAGGCAATGCCCCCTGTCAGGCCCACCAGAAACATCTTC +
Preference number: 6 (lower is better)
Translates to: ITAQPSCWNTWITEL*PEAMPPVRPTRNIF
Trigger: GAAGATGTTTCTGGTGGGCCTGACAGGGGGCATTGCCTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGCTGTGCGGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp AGCTGCCGCCGGTCAGGCTGGTTAAAGATCAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTCTCCAGCAAGACCTCAGTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: SCRRSGWLKIRSPRT*RFMSPFSSKTSVPK
Trigger: CTTCGGCACTGAGGTCTTGCTGGAGAACGGCGACATAAATCGCAAGGTCCTGGGGGACCTGATCTTTAACCAGCCTGACCGGCGGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS TCA 72 bp CTCTGGGGCTGGTACGGGGCTCCCGGAGGAAGTACTTaGACGTCTCCTTCATCATCTCCTTGCGAATCTCGG +
Preference number: 6 (lower is better)
Translates to: LWGWYGAPGGST*TSPSSSPCESR
Trigger: CCGAGATTCGCAAGGAGATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGAGCCCCGTACCAGCCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588295.1
ENST00000592902.5
CDS CCA 72 bp AGAGGAGGCAAAGGAAGTAAAGGGAGACAGCTTGGCTaGGGAGGGACATGTCCTGAGCTTGGGGTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RGGKGSKGRQLG*GGTCPELGVLW
Trigger: CCAGAGCACCCCAAGCTCAGGACATGTCCCTCCCCAGCCAAGCTGTCTCCCTTTACTTCCTTTGCCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS CAA 72 bp ATCATCTCCTTGCGAATCTCGGGGTGGGTGATGGCGTaGAGCAGCTGCCGCCGGTCAGGCTGGTTAAAGATC +
Preference number: 6 (lower is better)
Translates to: IISLRISGWVMA*SSCRRSGWLKI
Trigger: GATCTTTAACCAGCCTGACCGGCGGCAGCTGCTCAACGCCATCACCCACCCCGAGATTCGCAAGGAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 72 bp CGCTCCAGCTCAGTGTGCAAGAGGATGACCTGGCGTTaGGTGACACTCCACTCGCCCGAGTTGTCTAGGACA +
Preference number: 6 (lower is better)
Translates to: RSSSVCKRMTWR*VTLHSPELSRT
Trigger: TGTCCTAGACAACTCGGGCGAGTGGAGTGTCACCAAACGCCAGGTCATCCTCTTGCACACTGAGCTGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 72 bp CCTCTGGGGCTGGTACGGGGCTCCCGGAGGAAGTACTaGAACGTCTCCTTCATCATCTCCTTGCGAATCTCG +
Preference number: 6 (lower is better)
Translates to: PLGLVRGSRRKY*NVSFIISLRIS
Trigger: CGAGATTCGCAAGGAGATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGAGCCCCGTACCAGCCCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588295.1
ENST00000592902.5
CDS GCA 72 bp ATTAAACTGTCAGCCTCCTTAAGAGCTGAGGGAACGTaGTTCTTTCCTCTGGGGCTGGTACGGGGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: IKLSASLRAEGT*FFPLGLVRGSR
Trigger: CCGGGAGCCCCGTACCAGCCCCAGAGGAAAGAAGCACGTTCCCTCAGCTCTTAAGGAGGCTGACAGTTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588295.1
ENST00000592902.5
CDS CAA 72 bp CGGTCAGGCTGGTTAAAGATCAGGTCCCCCAGGACCTaGCGATTTATGTCGCCGTTCTCCAGCAAGACCTCA +
Preference number: 6 (lower is better)
Translates to: RSGWLKIRSPRT*RFMSPFSSKTS
Trigger: TGAGGTCTTGCTGGAGAACGGCGACATAAATCGCAAGGTCCTGGGGGACCTGATCTTTAACCAGCCTGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 72 bp CGGAGGAAGTACTTGAACGTCTCCTTCATCATCTCCTaGCGAATCTCGGGGTGGGTGATGGCGTTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRKYLNVSFIIS*RISGWVMALSS
Trigger: GCTGCTCAACGCCATCACCCACCCCGAGATTCGCAAGGAGATGATGAAGGAGACGTTCAAGTACTTCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588295.1
ENST00000588499.5
ENST00000592902.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp GTGCCAGAAGGACCTGCTTGGGAGAGGCCAGCGGGACTGATCAGTTaGGGCCAAAATAATTGGGAGAGAGGAGGCAAAGGAAGTAAAGGG +
Preference number: 6 (lower is better)
Translates to: VPEGPAWERPAGLIS*GQNNWERGGKGSKG
Trigger: CCCTTTACTTCCTTTGCCTCCTCTCTCCCAATTATTTTGGCCCAAACTGATCAGTCCCGCTGGCCTCTCCCAAGCAGGTCCTTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452796.6
CDS TCA 72 bp CCAGAATCACGTAGCGGTATCCCCGGAGGAAGTACTTaGACGTCTCCTTCATCATCTCCTTGCGAATCTCGG +
Preference number: 6 (lower is better)
Translates to: PESRSGIPGGST*TSPSSSPCESR
Trigger: CCGAGATTCGCAAGGAGATGATGAAGGAGACGTTCAAGTACTTCCTCCGGGGATACCGCTACGTGATTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 90 bp TGTGTGTCCCGGTCGCAGTATACTACCACGGTGTGCTTCATGTACTaGAGCAACTTCTTGGTCTCAAACAGCAGGGGGATATCCAGAATC +
Preference number: 6 (lower is better)
Translates to: CVSRSQYTTTVCFMY*SNFLVSNSRGISRI
Trigger: GATTCTGGATATCCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACACCGTGGTAGTATACTGCGACCGGGACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS GCA 72 bp AGCTGTGTGTCCCGGTCGCAGTATACTACCACGGTGTaGTTCATGTACTTGAGCAACTTCTTGGTCTCAAAC +
Preference number: 6 (lower is better)
Translates to: SCVSRSQYTTTV*FMYLSNFLVSN
Trigger: GTTTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACACCGTGGTAGTATACTGCGACCGGGACACACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 72 bp CGGTCGCAGTATACTACCACGGTGTGCTTCATGTACTaGAGCAACTTCTTGGTCTCAAACAGCAGGGGGATA +
Preference number: 6 (lower is better)
Translates to: RSQYTTTVCFMY*SNFLVSNSRGI
Trigger: TATCCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACACCGTGGTAGTATACTGCGACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS TCA 72 bp GGTCGCAGTATACTACCACGGTGTGCTTCATGTACTTaGGCAACTTCTTGGTCTCAAACAGCAGGGGGATAT +
Preference number: 6 (lower is better)
Translates to: GRSILPRCASCT*ATSWSQTAGGY
Trigger: ATATCCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACACCGTGGTAGTATACTGCGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS CAA 72 bp ACTACCACGGTGTGCTTCATGTACTTGAGCAACTTCTaGGTCTCAAACAGCAGGGGGATATCCAGAATCACG +
Preference number: 6 (lower is better)
Translates to: TTTVCFMYLSNF*VSNSRGISRIT
Trigger: CGTGATTCTGGATATCCCCCTGCTGTTTGAGACCAAGAAGTTGCTCAAGTACATGAAGCACACCGTGGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000310604.8
ENST00000342350.9
ENST00000452796.6
ENST00000588499.5
ENST00000593094.1
ENST00000614054.4
ENST00000651974.1
CDS TCA 72 bp CTGAAATCAAACCTCGGATTTTGGAACCTCCACGCCTaGAACCCTAAACCAGCATCGAACTACAACTCCCAT +
Preference number: 6 (lower is better)
Translates to: LKSNLGFWNLHA*NPKPASNYNSH
Trigger: ATGGGAGTTGTAGTTCGATGCTGGTTTAGGGTTTCAGGCGTGGAGGTTCCAAAATCCGAGGTTTGATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310604.8