RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCAF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000132716

Ensembl transcript IDs: ENST00000326837.6, ENST00000368073.7, ENST00000368074.6, ENST00000407642.6, ENST00000419626.1, ENST00000440682.5, ENST00000447377.5, ENST00000461888.5, ENST00000466253.1, ENST00000473382.2, ENST00000475733.5, ENST00000476033.5, ENST00000477163.1, ENST00000481831.1, ENST00000490368.5, ENST00000495887.1, ENST00000497354.1, ENST00000610139.5

Found 633 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGATGTGTCTGAGGAGCTGGGAGACTCATCAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTCGCCAGCGCCGGTGATGGCGTCTCT +
Preference number: 1 (lower is better)
Translates to: PMCLRSWETHQSPRL*PQPQVLASAGDGVS
Trigger: AGAGACGCCATCACCGGCGCTGGCGAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTGATGAGTCTCCCAGCTCCTCAGACACATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR CCA 90 bp TCTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTaGGACAGGAAAGGGTTGCCCAGGCAGGATCAGGTTGGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: SKAKSPKCVSAECRA*DRKGLPRQDQVGSP
Trigger: GGGGCTGCCAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
3UTR CCA 90 bp CCTCAGGGAGTAAGTACAGCAGCCAACATCTGGTCTCAGAGCTGCTaGGAAAAGGGGCAGGAGGAAGAAGTATCTGGGAATACCATTCTC +
Preference number: 1 (lower is better)
Translates to: PQGVSTAANIWSQSC*EKGQEEEVSGNTIL
Trigger: GAGAATGGTATTCCCAGATACTTCTTCCTCCTGCCCCTTTTCCCAGCAGCTCTGAGACCAGATGTTGGCTGCTGTACTTACTCCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR TCA 90 bp GCCTCCTACCAGCACACATTTAATAAGCTGCATGCACCCTACCTATaGGGCTTCCAACAGTCCACATGCTCAAGGAATCTAGGGTTGCCA +
Preference number: 1 (lower is better)
Translates to: ASYQHTFNKLHAPYL*GFQQSTCSRNLGLP
Trigger: TGGCAACCCTAGATTCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTATTAAATGTGTGCTGGTAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR CCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTaGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGATGTCTTTCTTT +
Preference number: 1 (lower is better)
Translates to: EPHSRAQLPFLGTLC*FTPLVCPSPGMSFF
Trigger: AAAGAAAGACATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
3UTR TCA 90 bp GAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTaGATGCCAGGACTTATCCTGTCAATAATGCCTGAGCAGAGAAAA +
Preference number: 1 (lower is better)
Translates to: ENFWARVPGHFTRPV*MPGLILSIMPEQRK
Trigger: TTTTCTCTGCTCAGGCATTATTGACAGGATAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR TCA 90 bp CCTCACCTGACCTATTTAGGGGGTGATGGGATGAAGAGAAGAGAGTaGAGGATATGTAATCAAGTGCAAAATACTGTGGTAAGTACAGAG +
Preference number: 1 (lower is better)
Translates to: PHLTYLGGDGMKRRE*RICNQVQNTVVSTE
Trigger: CTCTGTACTTACCACAGTATTTTGCACTTGATTACATATCCTTCACTCTCTTCTCTTCATCCCATCACCCCCTAAATAGGTCAGGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CCA 90 bp TTCCCTTCACTCTTCTATAAAGAAGGGAACTGGCATGAAGTTGGATaGCTTAATGATCAAGCAGCTAAAGGTAAGAGAGACAGAGTGAGA +
Preference number: 1 (lower is better)
Translates to: FPSLFYKEGNWHEVG*LNDQAAKGKRDRVR
Trigger: TCTCACTCTGTCTCTCTTACCTTTAGCTGCTTGATCATTAAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATAGAAGAGTGAAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CCA 90 bp AAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGAAGGGAACTaGCATGAAGTTGGATGGCTTAATGATCAAGCAGCTAAAGGTAAG +
Preference number: 1 (lower is better)
Translates to: KPRKSFPSLFYKEGN*HEVGWLNDQAAKGK
Trigger: CTTACCTTTAGCTGCTTGATCATTAAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp CAGGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGTCTCGCCAGCGCCGGTaGTGGCGTCTCTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: QVGSPSLPHLGMRPQDGMSRQRR*WRLCLR
Trigger: CCTGAGACAGAGACGCCATCACCGGCGCTGGCGAGA...CATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR-3UTR GCA 90 bp TGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCCCACGCCTGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 2 (lower is better)
Translates to: WETKGLSSDTTPNPCPTPGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...AGGCGTGGGACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR CCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACTGGGCCAGAGTACCTaGTCACTTCACCAGACCTGT +
Preference number: 2 (lower is better)
Translates to: GWQPQPAPPRYEASRWHALGQST*SLHQTC
Trigger: ACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAG...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR-3UTR CCA 90 bp AGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: RTSGPEYLVTSPDLSECQQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...CTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR CCA 90 bp CCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGACTCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: PVMASLSQVMHKEPQHVTQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...AGTCACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR-3UTR CCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR CCA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACAGGAACCACAGCATGTaGCTATCAAACAGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHRNHSM*LSNRSV
Trigger: AACTGACCTGTTTGATAGTCACATGCTGTGGTTCCT...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR-3UTR CCA 90 bp CAGGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGGGGGAATGTAGAGAATaGGATCAAGCATCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: QVGSPSLPHLGMRPQDGMGECRE*DQASKC
Trigger: GCACTTTGATGCTTGATCCCATTCTCTACATTCCCC...CATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR CCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCCTGGGCCAGAGTACCTaGTCACTTCACCAGACCTGT +
Preference number: 2 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPLGQST*SLHQTC
Trigger: ACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAG...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR-3UTR CCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGACAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGQSPRL*PQPQVL
Trigger: GAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTG...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR TCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGAGCTCTGGCCTTAGATaGCTGGGCTGGGGGAATGTA +
Preference number: 2 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGSSGLR*LGWGNV
Trigger: TACATTCCCCCAGCCCAGTCATCTAAGGCCAGAGCT...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR GCA 90 bp AAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 2 (lower is better)
Translates to: KGKSQSLVTIHRGKLTPGGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...ACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAACTGGCCCCTTGGTACTaGATAGCCAGTTGTTCCCCC +
Preference number: 2 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQLAPWY*IASCSP
Trigger: GGGGGAACAACTGGCTATTCAGTACCAAGGGGCCAG...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR GCA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 2 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CAA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGATGTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: RAPFQGSTPIPRYSL*VHSSGLSFSWDVFL
Trigger: AAGAAAGACATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
3UTR CAA 90 bp CATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTaGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGATGTCTTT +
Preference number: 2 (lower is better)
Translates to: HRAPFQGSTPIPRYS*LVHSSGLSFSWDVF
Trigger: AAAGACATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
3UTR-3UTR GCA 90 bp TCTCAGGTGATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 2 (lower is better)
Translates to: SQVMHKEPQHVTIKQVSLGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...CAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCATCACCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR-3UTR GCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGGATCAAGCATCAAAGTaGTCTTGGGAGACTAAGGGG +
Preference number: 2 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGDQASK*SWETKG
Trigger: CCCCTTAGTCTCCCAAGAGCACTTTGATGCTTGATC...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR TCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCATGCACCCTACCTATaGGGCTTCCAACAGTCCACA +
Preference number: 2 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLHAPYL*GFQQST
Trigger: TGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATG...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR-3UTR TCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAGACCTATTTAGGGGGTaGTGGGATGAAGAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGDLFRG*WDEEKR
Trigger: TCTCTTCTCTTCATCCCATCACCCCCTAAATAGGTC...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAAGACCTATTTAGGGGGTaGTGGGATGAAGAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQDLFRG*WDEEKR
Trigger: TCTCTTCTCTTCATCCCATCACCCCCTAAATAGGTC...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR CCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCACTAGGTACTCTTTGTTaGTTCACTCCTCTGGTTTGT +
Preference number: 2 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPLGTLC*FTPLVC
Trigger: ACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAG...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR GCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTTTCCAACAGTCCACATaGTCAAGGAATCTAGGGTTG +
Preference number: 2 (lower is better)
Translates to: FELRQFGSRACAYTTLPPFQQST*SRNLGL
Trigger: CAACCCTAGATTCCTTGAGCATGTGGACTGTTGGAA...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR-3UTR CCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTGTGAAGAGTGTGGGATaGTTAGGGGCTTTAAGGACT +
Preference number: 2 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSVKSVG*LGALRT
Trigger: AGTCCTTAAAGCCCCTAACCATCCCACACTCTTCAC...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR CCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGAGACAGGCCAGCCTCTaGTTAGAAGAGCCATCCTTG +
Preference number: 2 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKRQASL*LEEPSL
Trigger: CAAGGATGGCTCTTCTAACCAGAGGCTGGCCTGTCT...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR GCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGGGGAGAGGCCATTTCTaGCGAGTCCTATGCACCTCT +
Preference number: 2 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLGRGHF*RVLCTS
Trigger: AGAGGTGCATAGGACTCGGCAGAAATGGCCTCTCCC...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGCAGGAAGGGCAGAAATaGGGATCCTTCCATTCTCAA +
Preference number: 2 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKQEGQK*GSFHSQ
Trigger: TTGAGAATGGAAGGATCCTCATTTCTGCCCTTCCTG...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCCATGCACCCTACCTATaGGGCTTCCAACAGTCCACA +
Preference number: 2 (lower is better)
Translates to: LLSFYCYLILITLCVISPHAPYL*GFQQST
Trigger: TGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATG...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR-3UTR GCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACGGACAGGGAGATTGCTaGCACCAAACAATGTTTCTT +
Preference number: 2 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHGQGDC*HQTMFL
Trigger: AAGAAACATTGTTTGGTGGCAGCAATCTCCCTGTCC...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR CCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACAATAGTCTGCAGTGGTaGCACCACCCTAAAGTAGTT +
Preference number: 2 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHNSLQW*HHPKVV
Trigger: AACTACTTTAGGGTGGTGCCACCACTGCAGACTATT...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CAA 90 bp CACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACTCTaGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATATAGG +
Preference number: 2 (lower is better)
Translates to: HRGKLTPGVTSTPLL*FTLKSLYCIQRIYR
Trigger: CCTATATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
3UTR CAA 90 bp AGTCTTTCCCTTCACTCTTCTATAAAGAAGGGAACTGGCATGAAGTaGGATGGCTTAATGATCAAGCAGCTAAAGGTAAGAGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: SLSLHSSIKKGTGMK*DGLMIKQLKVRETE
Trigger: CTCTGTCTCTCTTACCTTTAGCTGCTTGATCATTAAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATAGAAGAGTGAAGGGAAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CAA 90 bp TCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTaGTCCTTCTCCTGGGATGTCTTTCTTTTATCTAAAGCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: STPIPRYSLLVHSSG*SFSWDVFLLSKAKS
Trigger: ACTTTTTGCTTTAGATAAAAGAAAGACATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACGGTAAGTACAGAGAATaGATAAGGTGGAAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHGKYRE*IRWKGK
Trigger: CTTTCCTTTCCACCTTATTCATTCTCTGTACTTACC...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR TCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATGAAGAGAAGAGAGTaGAGGATATGTAATCAAGTG +
Preference number: 2 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSMKRRE*RICNQV
Trigger: CACTTGATTACATATCCTTCACTCTCTTCTCTTCAT...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CCA 72 bp CTGGGACAGGAAAGGGTTGCCCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCC +
Preference number: 3 (lower is better)
Translates to: LGQERVAQAGSG*QPQPAPPRYEA
Trigger: GGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
ENST00000490368.5
3UTR CCA 72 bp CTGAGGAGCTGGGAGACTCATCAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTCGCCAGCGCCGGTGAT +
Preference number: 3 (lower is better)
Translates to: LRSWETHQSPRL*PQPQVLASAGD
Trigger: ATCACCGGCGCTGGCGAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTGATGAGTCTCCCAGCTCCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
3UTR GCA 72 bp TTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTGGCAGCCCCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: FLLNVGPGTGKG*PGRIRLAAPAC
Trigger: GCAGGCTGGGGCTGCCAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
ENST00000490368.5
3UTR-3UTR CAA 90 bp ACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTACCACCCCCAACCCTaGTCCCACGCCTCCCTTGTC +
Preference number: 3 (lower is better)
Translates to: TSGPEYLVTSPDLSECQDYHPQP*SHASLV
Trigger: GACAAGGGAGGCGTGGGACAAGGGTTGGGGGTGGTA...GTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR CAA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGCCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTG +
Preference number: 3 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQPRYSL*VHSSGL
Trigger: CAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGG...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
3UTR-3UTR CAA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCCCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTG +
Preference number: 3 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPPRYSL*VHSSGL
Trigger: CAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGG...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR GCA 72 bp CTGGGGGAATGTAGAGAATGGGATCAAGCATCAAAGTaGTCTTGGGAGACTAAGGGGCTGTCCTCTGATACC +
Preference number: 3 (lower is better)
Translates to: LGECREWDQASK*SWETKGLSSDT
Trigger: GGTATCAGAGGACAGCCCCTTAGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR CCA 72 bp GAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTaGGAGACTAAGGGGCTGTCCTCTGATACCACCCCC +
Preference number: 3 (lower is better)
Translates to: ECREWDQASKCS*ETKGLSSDTTP
Trigger: GGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR-3UTR CAA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTTCTCAAAAAGAGGCTTaGGGGAGAGGCCATTTCTGC +
Preference number: 3 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSSQKEA*GRGHFC
Trigger: GCAGAAATGGCCTCTCCCCAAAGCCTCTTTTTGAGA...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR CAA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTG +
Preference number: 3 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSPRYSL*VHSSGL
Trigger: CAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGG...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR CAA 90 bp AAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTATTCCTAGGTACTCTTaGTTGGTTCACTCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: KGKSQSLVTIHRGKLTPGIPRYS*LVHSSG
Trigger: ACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT...ACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR TCA 72 bp CAGCACACATTTAATAAGCTGCATGCACCCTACCTATaGGGCTTCCAACAGTCCACATGCTCAAGGAATCTA +
Preference number: 3 (lower is better)
Translates to: QHTFNKLHAPYL*GFQQSTCSRNL
Trigger: TAGATTCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTATTAAATGTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR-3UTR CAA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTATCAAGGAATCTAGGGTaGCCAAGAGTCTTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSRNLG*PRVFQC
Trigger: ACACTGAAAGACTCTTGGCAACCCTAGATTCCTTGA...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR-3UTR CAA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATGGAACTGGCATGAAGTaGGATGGCTTAATGATCAAG +
Preference number: 3 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDGTGMK*DGLMIK
Trigger: CTTGATCATTAAGCCATCCAACTTCATGCCAGTTCC...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR-3UTR CAA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATTCCACACCATTACTCTaGTTCACTCTTAAGTCCCTT +
Preference number: 3 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDSTPLL*FTLKSL
Trigger: AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CCA 72 bp CTCTTCTATAAAGAAGGGAACTGGCATGAAGTTGGATaGCTTAATGATCAAGCAGCTAAAGGTAAGAGAGAC +
Preference number: 3 (lower is better)
Translates to: LFYKEGNWHEVG*LNDQAAKGKRD
Trigger: GTCTCTCTTACCTTTAGCTGCTTGATCATTAAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
3UTR CCA 72 bp AAGTCTTTCCCTTCACTCTTCTATAAAGAAGGGAACTaGCATGAAGTTGGATGGCTTAATGATCAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: KSFPSLFYKEGN*HEVGWLNDQAA
Trigger: AGCTGCTTGATCATTAAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATAGAAGAGTGAAGGGAAAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCCCACGCCTCGCTTGCGCCTGCGCTaGCACGCTTTCCGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: WETKGLSSDTTPNPCPTPRLRLR*HAFRPR
Trigger: ACGGGGCCGGAAAGCGTGGCAGCGCAGGCGCAAGCG...AGGCGTGGGACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACTCTCGCCAGCGCCGGTaGTGGCGTCTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHSRQRR*WRLCLR
Trigger: CCTGAGACAGAGACGCCATCACCGGCGCTGGCGAGA...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCAAGGGCAGGGAGGGCTTaGCAGCGAGGTCGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GWQPQPAPPRYEASRWHARAGRA*QRGRGR
Trigger: TCTACCCCGACCTCGCTGGCAAGCCCTCCCTGCCCT...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp AGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGTTCAGCCGCCCCGTCCACTaGCACCACCAACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGTPTLHSGPLVLNSQLFSRPVH*HHQRRR
Trigger: GCGGCGGCGTTGGTGGTGGCAGTGGACGGGGCGGCT...GAACAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR GCA 90 bp CTGCCGAGTCCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCACTCTGCGCTTGCGCCTaGGCTGCCACGCTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LPSPMHLSIEPHSRAQLPLCACA*AATLSG
Trigger: GCCGGAAAGCGTGGCAGCGCAGGCGCAAGCGCAGAG...TGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGGACTCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS-3UTR GCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACCCTCAAGCCCATGCTaGAGGCGGAAACGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GWQPQPAPPRYEASRWHAPSSPC*RRKRCT
Trigger: TGTGCAGCGTTTCCGCCTGCAGCATGGGCTTGAGGG...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCACCGCCTCCGCTCTCTaGGCTTGCGCCTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPTASAL*ACACAA
Trigger: GGCAGCGCAGGCGCAAGCGCAGAGAGCGGAGGCGGT...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368074.6
ENST00000461888.5
CDS-3UTR TCA 90 bp CCAGCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATTCTCGCCAGCGCCGGTaGTGGCGTCTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PAPVMASLSQVMHKEPQHSRQRR*WRLCLR
Trigger: CCTGAGACAGAGACGCCATCACCGGCGCTGGCGAGA...ATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGCTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp CTGCCGAGTCCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCAGGCCTCAAGATGGCATaGACTGCACCCGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPSPMHLSIEPHSRAQLPGLKMA*TAPGQG
Trigger: GCCCTGACCGGGTGCAGTGCATGCCATCTTGAGGCC...TGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGGACTCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp AAGTGCTCTTGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCTCTGCGCTTGCGCCTaGGCTGCCACGCTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: KCSWETKGLSSDTTPNPCLCACA*AATLSG
Trigger: GCCGGAAAGCGTGGCAGCGCAGGCGCAAGCGCAGAG...ACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCAAGAGCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACTCGACTTTCTGTGCTaGTGCGGTTGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: GWQPQPAPPRYEASRWHALDFLC*CGWGHH
Trigger: ATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGAG...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCAAGCTCTGGCCTTAGATaGCTGGGCTGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: GWQPQPAPPRYEASRWHASSGLR*LGWGNV
Trigger: TACATTCCCCCAGCCCAGTCATCTAAGGCCAGAGCT...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCAGGGCAGGGAGGGCTTaGCAGCGAGGTCGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPRAGRA*QRGRGR
Trigger: TCTACCCCGACCTCGCTGGCAAGCCCTCCCTGCCCT...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR GCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCAAGAGTCTGGTTCCAGTaGCAACTTGTGGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: GWQPQPAPPRYEASRWHARVWFQ*QLVGRS
Trigger: GGAGCGTCCCACAAGTTGGCACTGGAACCAGACTCT...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGCAAGATGGCATGCACTaGACCCGGTCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQQDGMH*TRSGPS
Trigger: GGAGGGCCCTGACCGGGTGCAGTGCATGCCATCTTG...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp CCAGCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATCAAGATGGCATGCACTaGACCCGGTCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PAPVMASLSQVMHKEPQHQDGMH*TRSGPS
Trigger: GGAGGGCCCTGACCGGGTGCAGTGCATGCCATCTTG...ATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp CCAGCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGGCCTCAAGATGGCATaGACTGCACCCGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PAPVMASLSQVMHKEPQHGLKMA*TAPGQG
Trigger: GCCCTGACCGGGTGCAGTGCATGCCATCTTGAGGCC...ATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGCGCTTGCGCCTGCGCTaGCACGCTTTCCGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLRLRLR*HAFRPR
Trigger: ACGGGGCCGGAAAGCGTGGCAGCGCAGGCGCAAGCG...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS-3UTR GCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGACCGCCTCCGCTCTCTaGGCTTGCGCCTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGTASAL*ACACAA
Trigger: GGCAGCGCAGGCGCAAGCGCAGAGAGCGGAGGCGGT...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CCA 90 bp GCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGCTGTGCTGGTGCGGTTaGGGCCACCATCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: APVMASLSQVMHKEPQHVLCWCG*GHHHPQ
Trigger: CTGGGGATGATGGTGGCCCCAACCGCACCAGCACAG...CACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTGGTCATCGCTGCCACTaGCCAGCCAGGTGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLGHRCH*PARCRA
Trigger: AGCGCGGCACCTGGCTGGCCAGTGGCAGCGATGACC...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCCCTTCTGCTAGCGGCTaGTCCGACTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPPSASG*SDCSRP
Trigger: GGGCCTGGAACAGTCGGAGCAGCCGCTAGCAGAAGG...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR GCA 90 bp TGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCCCACGCCTTGTGGCAGACAGTTCTaGTACTCGAACCTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: WETKGLSSDTTPNPCPTPCGRQF*YSNLPV
Trigger: GACGGGCAGGTTCGAGTAGCAGAACTGTCTGCCACA...AGGCGTGGGACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCGGCCTCAAGATGGCATaGACTGCACCCGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPGLKMA*TAPGQG
Trigger: GCCCTGACCGGGTGCAGTGCATGCCATCTTGAGGCC...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTCCGCTCTCTGCGCTTaGGCCTGCGCTGCCACGCTT +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLSALCA*ACAATL
Trigger: AAGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGA...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS-3UTR GCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCATGGAGAATGGACAAATaGTGGCCTGGGAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GWQPQPAPPRYEASRWHAWRMDK*WPGRGH
Trigger: ATGCCCTCTCCCAGGCCAGCATTTGTCCATTCTCCA...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR CCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGGGTCATCGCTGCCACTaGCCAGCCAGGTGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGGHRCH*PARCRA
Trigger: AGCGCGGCACCTGGCTGGCCAGTGGCAGCGATGACC...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CCA 90 bp GGGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGCACCAGTTTCGACGCTaGGCGGTCTTGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSRQRTSGPEYLVTSPDLHQFRR*AVLSQV
Trigger: GACCTGAGACAAGACCGCCCAGCGTCGAAACTGGTG...CAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp GAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGGGCAAATGGCAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ELLGQSTWSLHQTCLGKWQSPRL*PQPQVL
Trigger: GAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTG...CCATTTGCCCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR TCA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACTCCTCCTTTTATCACTaGAGTAAGGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHSSFYH*SKARLS
Trigger: GCTCAGCCTGGCCTTACTTCAGTGATAAAAGGAGGA...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp GGGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGGCTCAAACTCAGGTCTaGGGCCTCCACTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: GSRQRTSGPEYLVTSPDLAQTQV*GLHFNA
Trigger: GGCATTGAAGTGGAGGCCTCAGACCTGAGTTTGAGC...CAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTCTCGCCAGCGCCGGTaGTGGCGTCTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCSRQRR*WRLCLR
Trigger: CCTGAGACAGAGACGCCATCACCGGCGCTGGCGAGA...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCTCGCCAGCGCCGGTaGTGGCGTCTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHSRQRR*WRLCLR
Trigger: CCTGAGACAGAGACGCCATCACCGGCGCTGGCGAGA...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTAGGGCAGGGAGGGCTTaGCAGCGAGGTCGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCRAGRA*QRGRGR
Trigger: TCTACCCCGACCTCGCTGGCAAGCCCTCCCTGCCCT...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACAGGGCAGGGAGGGCTTaGCAGCGAGGTCGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHRAGRA*QRGRGR
Trigger: TCTACCCCGACCTCGCTGGCAAGCCCTCCCTGCCCT...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CAAAGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCCCTCAAGCCCATGCTaGAGGCGGAAACGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QRESGTPTLHSGPLVLNSPSSPC*RRKRCT
Trigger: TGTGCAGCGTTTCCGCCTGCAGCATGGGCTTGAGGG...GCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CAGGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGAGCTTCAGCTGTGGGTaGCCAGATCTTCACATCATG +
Preference number: 4 (lower is better)
Translates to: QVGSPSLPHLGMRPQDGMSFSCG*PDLHIM
Trigger: CATGATGTGAAGATCTGGGCACCCACAGCTGAAGCT...CATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp GGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GADRELLGQSTWSLHQTCGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...ACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp CTGCCGAGTCCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCAGGGAGAGGCCATTTCTaGCGAGTCCTATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LPSPMHLSIEPHSRAQLPGRGHF*RVLCTS
Trigger: AGAGGTGCATAGGACTCGGCAGAAATGGCCTCTCCC...TGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGGACTCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTCTGTGCTGGTGCGGTTaGGGCCACCATCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLLCWCG*GHHHPQ
Trigger: CTGGGGATGATGGTGGCCCCAACCGCACCAGCACAG...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGCTCGACTTTCTGTGCTaGTGCGGTTGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQLDFLC*CGWGHH
Trigger: ATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGAG...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAGGTCATCGCTGCCACTaGCCAGCCAGGTGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPGHRCH*PARCRA
Trigger: AGCGCGGCACCTGGCTGGCCAGTGGCAGCGATGACC...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR TCA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTTCTCGCCAGCGCCGGTaGTGGCGTCTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSSRQRR*WRLCLR
Trigger: CCTGAGACAGAGACGCCATCACCGGCGCTGGCGAGA...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp CCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTCTCGTCCGATGTGTCTaGGGAGCTGGGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: PMHLSIEPHSRAQLPFLGLVRCV*GAGRLI
Trigger: GATGAGTCTCCCAGCTCCTCAGACACATCGGACGAG...ACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCCTCGTCCGATGTGTCTaGGGAGCTGGGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPLVRCV*GAGRLI
Trigger: GATGAGTCTCCCAGCTCCTCAGACACATCGGACGAG...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
ENST00000490368.5
CDS-3UTR TCA 90 bp TGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCCCACGCCTTTCACCAGACCTGTCTaGATGCCAGGACTTATCCTG +
Preference number: 4 (lower is better)
Translates to: WETKGLSSDTTPNPCPTPFTRPV*MPGLIL
Trigger: CAGGATAAGTCCTGGCATTCAGACAGGTCTGGTGAA...AGGCGTGGGACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp GGGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGAACCCTGGCATTGGCTaGGCTAAAAGCAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: GSRQRTSGPEYLVTSPDLNPGIG*AKSKLA
Trigger: GGCCAGTTTGCTTTTAGCTCAGCCAATGCCAGGGTT...CAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR GCA 90 bp GCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGGACTTTCTGTGCTGGTaGGGTTGGGGCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: APVMASLSQVMHKEPQHVDFLCW*GWGHHH
Trigger: ATGATGGTGGCCCCAACCGCACCAGCACAGAAAGTC...CACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp AGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGTTCACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGTPTLHSGPLVLNSQLFTRRRG*SSSSSS
Trigger: AGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGT...GAACAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGAAGGGCAGGGAGGGCTTaGCAGCGAGGTCGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGRAGRA*QRGRGR
Trigger: TCTACCCCGACCTCGCTGGCAAGCCCTCCCTGCCCT...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGCCTTCAGGTCATCGCTaGCACTGGCCAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGPSGHR*HWPARC
Trigger: GCACCTGGCTGGCCAGTGGCAGCGATGACCTGAAGG...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR GCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTGTGGCAGACAGTTCTaGTACTCGAACCTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQCGRQF*YSNLPV
Trigger: GACGGGCAGGTTCGAGTAGCAGAACTGTCTGCCACA...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGAGAGTCTGGTTCCAGTaGCAACTTGTGGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQRVWFQ*QLVGRS
Trigger: GGAGCGTCCCACAAGTTGGCACTGGAACCAGACTCT...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp GGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCAAACAGGTCAGTTTGGTaGAAGCTATCTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: GWQPQPAPPRYEASRWHANRSVW*KLSSSR
Trigger: GCGGGATGAAGATAGCTTGCACCAAACTGACCTGTT...TGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR GCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCAAGATGGCATGCACTaGACCCGGTCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTQDGMH*TRSGPS
Trigger: GGAGGGCCCTGACCGGGTGCAGTGCATGCCATCTTG...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTGGCCTCAAGATGGCATaGACTGCACCCGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCGLKMA*TAPGQG
Trigger: GCCCTGACCGGGTGCAGTGCATGCCATCTTGAGGCC...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp GGGCTGGGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTGGCCTCAAGATGGCATaGACTGCACCCGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLGECREWDQASKCSWETGLKMA*TAPGQG
Trigger: GCCCTGACCGGGTGCAGTGCATGCCATCTTGAGGCC...AGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACGGCCTCAAGATGGCATaGACTGCACCCGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHGLKMA*TAPGQG
Trigger: GCCCTGACCGGGTGCAGTGCATGCCATCTTGAGGCC...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTGCCCGCTTCCCGTCTTaGGTCATCCTTCTGCTAGCG +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLARFPS*VILLLA
Trigger: CGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGC...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR CCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGCTGTGCTGGTGCGGTTaGGGCCACCATCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGLCWCG*GHHHPQ
Trigger: CTGGGGATGATGGTGGCCCCAACCGCACCAGCACAG...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CCA 90 bp CTGCCGAGTCCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTGACACAACCAGTATaGCCCTCAAGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LPSPMHLSIEPHSRAQLPLTQPV*PSSPCC
Trigger: GCAGCATGGGCTTGAGGGCCATACTGGTTGTGTCAA...TGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGGACTCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAGGTCATCGCTGCCACTaGCCAGCCAGGTGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGGHRCH*PARCRA
Trigger: AGCGCGGCACCTGGCTGGCCAGTGGCAGCGATGACC...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGCTCAAAGTCCAGTACTaGCTGCCGCCGTACCCAATC +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQLKVQY*LPPYPI
Trigger: GATTGGGTACGGCGGCAGCCAGTACTGGACTTTGAG...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGCTCAAAGTCCAGTACTaGCTGCCGCCGTACCCAATC +
Preference number: 4 (lower is better)
Translates to: APVMASLSQVMHKEPQHVLKVQY*LPPYPI
Trigger: GATTGGGTACGGCGGCAGCCAGTACTGGACTTTGAG...CACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CTGCCGAGTCCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCAATGTGTCTGAGGAGCTaGGAGACTCATCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LPSPMHLSIEPHSRAQLPMCLRS*ETHQSP
Trigger: CGGACTCTGATGAGTCTCCCAGCTCCTCAGACACAT...TGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGGACTCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp GGGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGATGTGTCTGAGGAGCTaGGAGACTCATCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: GSRQRTSGPEYLVTSPDLMCLRS*ETHQSP
Trigger: CGGACTCTGATGAGTCTCCCAGCTCCTCAGACACAT...CAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CCA 90 bp GGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGGGCCAGAGTACCTaGTCACTTCACCAGACCTGT +
Preference number: 4 (lower is better)
Translates to: GADRELLGQSTWSLHQTCLGQST*SLHQTC
Trigger: ACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAG...ACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR TCA 90 bp AGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGCTCCACTTCAATGCCTaGGGATGTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RTSGPEYLVTSPDLSECQLHFNA*GCLPPL
Trigger: GAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAG...CTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp CCAGCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTCCTTATCTTCACCTaGGCTCTCTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PAPVMASLSQVMHKEPQHVLIFT*ALCVCA
Trigger: GGCACAGACACAGAGAGCTCAGGTGAAGATAAGGAC...ATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp CTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTTATCTCGTCCGATGTGTCTaGGGAGCTGGGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: LGQSTWSLHQTCLNARTYLVRCV*GAGRLI
Trigger: GATGAGTCTCCCAGCTCCTCAGACACATCGGACGAG...ATAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACCTTCTGCTAGCGGCTaGTCCGACTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGPSASG*SDCSRP
Trigger: GGGCCTGGAACAGTCGGAGCAGCCGCTAGCAGAAGG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp GGGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTTCTGCCATCTGTGCTaGTCCCTTTGCTGGACATCT +
Preference number: 4 (lower is better)
Translates to: GSRQRTSGPEYLVTSPDLFCHLC*SLCWTS
Trigger: AGATGTCCAGCAAAGGGAGCAGCACAGATGGCAGAA...CAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTTGCCTCGACTTTCTGTaGTGGTGCGGTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTCLDFL*WCGWGH
Trigger: GTGGCCCCAACCGCACCAGCACAGAAAGTCGAGGCA...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCCCACGCCTGACCAGTGTCCTCCATaGTGTCAGAGTCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: WETKGLSSDTTPNPCPTPDQCPP*CQSPYL
Trigger: AAGATAAGGACTCTGACAGCATGGAGGACACTGGTC...AGGCGTGGGACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp CTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTTATACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGQSTWSLHQTCLNARTYTRRRG*SSSSSS
Trigger: AGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGT...ATAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp CCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGACTGAGGGCATTCAGCCCTaGATCTCTCACGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PVMASLSQVMHKEPQHVTEGIQP*ISHASL
Trigger: AAGGGAGGCGTGAGAGATGCAGGGCTGAATGCCCTC...AGTCACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR CCA 90 bp ATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGATGCCGCCATCTTACACTaGCCAGCGGCCGCCACCACC +
Preference number: 4 (lower is better)
Translates to: IPRYSLLVHSSGLSFSWDAAILH*PAAATT
Trigger: GGTGGTGGCGGCCGCTGGCCAGTGTAAGATGGCGGC...ATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326837.6
CDS-3UTR CCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGACACAACCAGTATaGCCCTCAAGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQLTQPV*PSSPCC
Trigger: GCAGCATGGGCTTGAGGGCCATACTGGTTGTGTCAA...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACAGCCAGGTGCCGCGCTaGTTAAAGTGCAGGGTATTG +
Preference number: 4 (lower is better)
Translates to: TSGPEYLVTSPDLSECQDSQVPR*LKCRVL
Trigger: CAATACCCTGCACTTTAACCAGCGCGGCACCTGGCT...GTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp TCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTTATCCAGTGCCAACTTGTaGGACGCTCCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGPEYLVTSPDLSECQDLSSANL*DAPLCW
Trigger: CCAGCACAAGGGAGCGTCCCACAAGTTGGCACTGGA...TAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGCAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGQSPRL*PQPQVL
Trigger: GAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTG...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp CCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTTGGTCTCAGAGCTGCTaGGAAAAGGGGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PMHLSIEPHSRAQLPFLGWSQSC*EKGQEE
Trigger: TTCCTCCTGCCCCTTTTCCCAGCAGCTCTGAGACCA...ACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CAGGTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCCTGCAGAATGCTTTTaGAGAATGGACAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: QVGSPSLPHLGMRPQDGMPAECF*RMDKCW
Trigger: CCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGG...CATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR TCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGGAAGTAAGGCCAGGCTaGGCTCCTGAGAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQEVRPG*APEKIG
Trigger: ACCTATTTTCTCAGGAGCTCAGCCTGGCCTTACTTC...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGCTCCACTTCAATGCCTaGGGATGTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLLHFNA*GCLPPL
Trigger: GAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAG...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGTTCCGTCTCTGTCTCAGGTaGTGCATAAGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: SGTPTLHSGPLVLNSQLFRLCLR*CIRNHS
Trigger: GCTGTGGTTCCTTATGCATCACCTGAGACAGAGACG...GAACAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp GAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGGGCAAATGGCGTCTCTGTCTCAGGTaGTGCATAAGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: ELLGQSTWSLHQTCLGKWRLCLR*CIRNHS
Trigger: GCTGTGGTTCCTTATGCATCACCTGAGACAGAGACG...CCATTTGCCCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR TCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCTCGTCCGATGTGTCTaGGGAGCTGGGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTLVRCV*GAGRLI
Trigger: GATGAGTCTCCCAGCTCCTCAGACACATCGGACGAG...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGCCCCTTGGTACTaGATAGCCAGTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPLAPWY*IASCSP
Trigger: GGGGGAACAACTGGCTATTCAGTACCAAGGGGCCAG...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGATGCCTCGACTTTCTGTaGTGGTGCGGTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGCLDFL*WCGWGH
Trigger: GTGGCCCCAACCGCACCAGCACAGAAAGTCGAGGCA...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCAGCTCTCTGTGTCTGTaGCTCGACTTTCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPSSLCL*LDFLCW
Trigger: CCAGCACAGAAAGTCGAGGCACAGACACAGAGAGCT...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACCCTCAAGCCCATGCTaGAGGCGGAAACGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGPSSPC*RRKRCT
Trigger: TGTGCAGCGTTTCCGCCTGCAGCATGGGCTTGAGGG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTCCTTCAGGTCATCGCTaGCACTGGCCAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLPSGHR*HWPARC
Trigger: GCACCTGGCTGGCCAGTGGCAGCGATGACCTGAAGG...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTTATGGGACGCTCCCTTGTaGTGGGCCACACGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SGPEYLVTSPDLSECQDLWDAPL*WATRFV
Trigger: TACAAAACGTGTGGCCCAGCACAAGGGAGCGTCCCA...TAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGACAAGATGGCATGCACTaGACCCGGTCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGQDGMH*TRSGPS
Trigger: GGAGGGCCCTGACCGGGTGCAGTGCATGCCATCTTG...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR GCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTGGGAGAGGCCATTTCTaGCGAGTCCTATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLGRGHF*RVLCTS
Trigger: AGAGGTGCATAGGACTCGGCAGAAATGGCCTCTCCC...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACAACTGGCCTGCAGAATaGTTTTGGAGAATGGACAAA +
Preference number: 4 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHNWPAE*FWRMDK
Trigger: TTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTT...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR CCA 90 bp AAGTGCTCTTGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTTCCAGACATCTCCTCTaGACTGCTAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KCSWETKGLSSDTTPNPCSRHLL*TARQAS
Trigger: GGAAGCCTGTCTAGCAGTCCAGAGGAGATGTCTGGA...ACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCAAGAGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTCGACTTTCTGTGCTaGTGCGGTTGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPLDFLC*CGWGHH
Trigger: ATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGAG...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTCTCAAAGTCCAGTACTaGCTGCCGCCGTACCCAATC +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLLKVQY*LPPYPI
Trigger: GATTGGGTACGGCGGCAGCCAGTACTGGACTTTGAG...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACGGAAGAAACTTGGCCTaGAACACATTACTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHGRNLA*NTLLLW
Trigger: CCACAAAAGTAATGTGTTCCAGGCCAAGTTTCTTCC...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CAAAGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCGACGCTCCCTTGTGCTaGGCCACACGTTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: QRESGTPTLHSGPLVLNSDAPLC*ATRFVF
Trigger: GAATACAAAACGTGTGGCCCAGCACAAGGGAGCGTC...GCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCATGTGTCTGAGGAGCTaGGAGACTCATCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPMCLRS*ETHQSP
Trigger: CGGACTCTGATGAGTCTCCCAGCTCCTCAGACACAT...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CCA 90 bp AGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGTTCAGACAGGCCAGCCTCTaGTTAGAAGAGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SGTPTLHSGPLVLNSQLFRQASL*LEEPSL
Trigger: CAAGGATGGCTCTTCTAACCAGAGGCTGGCCTGTCT...GAACAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACAGCAGCCAACATCTaGTCTCAGAGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PMHLSIEPHSRAQLPFLGTAANI*SQSCWE
Trigger: TTCCCAGCAGCTCTGAGACCAGATGTTGGCTGCTGT...ACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCGCCAGGCTGAGCTCCTaGGAAAATAGGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPARLSS*ENRSVD
Trigger: ATCTACAGACCTATTTTCTCAGGAGCTCAGCCTGGC...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR TCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCACTCCACTTCAATGCCTaGGGATGTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPLHFNA*GCLPPL
Trigger: GAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAG...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACTCCACTTCAATGCCTaGGGATGTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGLHFNA*GCLPPL
Trigger: GAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp TCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTTACGTCTCTGTCTCAGGTaGTGCATAAGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: SGPEYLVTSPDLSECQDLRLCLR*CIRNHS
Trigger: GCTGTGGTTCCTTATGCATCACCTGAGACAGAGACG...TAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp AGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCATCTCGCCAGCGCCGGTaGTGGCGTCTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RYKIRPLTVIGTGRLLPPSRQRR*WRLCLR
Trigger: CCTGAGACAGAGACGCCATCACCGGCGCTGGCGAGA...TGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCAGTACTCCCAGCGATaGCTTCGGGTCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSQYSQR*LRVGGR
Trigger: CCTTCCGCCGACCCGAAGTCATCGCTGGGAGTACTG...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368073.7
CDS-3UTR GCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTAGGCCTCCACTTCAATaGCTGAGGATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTRPPLQ*LRMSPS
Trigger: GGAGGGAGACATCCTCAGGCATTGAAGTGGAGGCCT...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGACTAGCTCTCTGTGTCTGTaGCTCGACTTTCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PVMASLSQVMHKEPQHVTSSLCL*LDFLCW
Trigger: CCAGCACAGAAAGTCGAGGCACAGACACAGAGAGCT...AGTCACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAAGGGCAGGGAGGGCTTaGCAGCGAGGTCGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLRAGRA*QRGRGR
Trigger: TCTACCCCGACCTCGCTGGCAAGCCCTCCCTGCCCT...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTCCTTCAGGTCATCGCTaGCACTGGCCAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPPSGHR*HWPARC
Trigger: GCACCTGGCTGGCCAGTGGCAGCGATGACCTGAAGG...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTTGGGACGCTCCCTTGTaGTGGGCCACACGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPWDAPL*WATRFV
Trigger: TACAAAACGTGTGGCCCAGCACAAGGGAGCGTCCCA...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTGGGACGCTCCCTTGTaGTGGGCCACACGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHWDAPL*WATRFV
Trigger: TACAAAACGTGTGGCCCAGCACAAGGGAGCGTCCCA...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTGGGAGAGGCCATTTCTaGCGAGTCCTATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCGRGHF*RVLCTS
Trigger: AGAGGTGCATAGGACTCGGCAGAAATGGCCTCTCCC...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR GCA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTTCCGCTCTCTGCGCTTaGGCCTGCGCTGCCACGCTT +
Preference number: 4 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQASALCA*ACAATL
Trigger: AAGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGA...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp GCGCCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGCCAGACCTGTCTGAATaGCAGGACTTATCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: APVMASLSQVMHKEPQHVPDLSE*QDLSCQ
Trigger: TTGACAGGATAAGTCCTGGCATTCAGACAGGTCTGG...CACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGGCGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACAAAAGCAAACTGGCCTaGAGAATGCTTTTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHKSKLA*RMLLEN
Trigger: ATTCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTT...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR CCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTGTGCTGGTGCGGTTaGGGCCACCATCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSLCWCG*GHHHPQ
Trigger: CTGGGGATGATGGTGGCCCCAACCGCACCAGCACAG...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTGTGCTGGTGCGGTTaGGGCCACCATCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLLCWCG*GHHHPQ
Trigger: CTGGGGATGATGGTGGCCCCAACCGCACCAGCACAG...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCCCACGCCTTCCTCTGAGCGGTCATaGACTCGATTTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: WETKGLSSDTTPNPCPTPSSERS*TRFSSL
Trigger: TAATGATGAAAATCGAGTCCATGACCGCTCAGAGGA...AGGCGTGGGACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGACTTTGACACAACCAGTATaGCCCTCAAGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: PVMASLSQVMHKEPQHVTLTQPV*PSSPCC
Trigger: GCAGCATGGGCTTGAGGGCCATACTGGTTGTGTCAA...AGTCACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTAGCCAGGTGCCGCGCTaGTTAAAGTGCAGGGTATTG +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTSQVPR*LKCRVL
Trigger: CAATACCCTGCACTTTAACCAGCGCGGCACCTGGCT...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCTCAAAGTCCAGTACTaGCTGCCGCCGTACCCAATC +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTLKVQY*LPPYPI
Trigger: GATTGGGTACGGCGGCAGCCAGTACTGGACTTTGAG...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTGACGCTCCCTTGTGCTaGGCCACACGTTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLDAPLC*ATRFVF
Trigger: GAATACAAAACGTGTGGCCCAGCACAAGGGAGCGTC...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTCAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSQSPRL*PQPQVL
Trigger: GAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTG...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQAQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR TCA 90 bp TCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTTAGCCAGGCTGAGCTCCTaGGAAAATAGGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SGPEYLVTSPDLSECQDLARLSS*ENRSVD
Trigger: ATCTACAGACCTATTTTCTCAGGAGCTCAGCCTGGC...TAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp GGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTTTGCTGGACATCTTaGATGATGTTTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GADRELLGQSTWSLHQTCLCWTS*MMFAVA
Trigger: GGCTACAGCAAACATCATTCAAGATGTCCAGCAAAG...ACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGACTCCACTTCAATGCCTaGGGATGTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGLHFNA*GCLPPL
Trigger: GAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAG...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR TCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACCGTCTCTGTCTCAGGTaGTGCATAAGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHRLCLR*CIRNHS
Trigger: GCTGTGGTTCCTTATGCATCACCTGAGACAGAGACG...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCGGAAGGAAAAGACCTaGGCGCTAAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTRKEKT*ALRAWD
Trigger: ATCCCAAGCTCTTAGCGCTCAGGTCTTTTCCTTCCG...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368073.7
CDS-3UTR TCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTACAGTACTCCCAGCGATaGCTTCGGGTCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLQYSQR*LRVGGR
Trigger: CCTTCCGCCGACCCGAAGTCATCGCTGGGAGTACTG...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610139.5
CDS-3UTR TCA 90 bp AAGTGCTCTTGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTCCTGTCAATAATGCCTaGGCAGAGAAAAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KCSWETKGLSSDTTPNPCPVNNA*AEKRAL
Trigger: CAGAGCTCTTTTCTCTGCTCAGGCATTATTGACAGG...ACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCAAGAGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGAGCCGCCCCGTCCACTaGCACCACCAACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLSRPVH*HHQRRR
Trigger: GCGGCGGCGTTGGTGGTGGCAGTGGACGGGGCGGCT...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR GCA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGAGGCCTCCACTTCAATaGCTGAGGATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGRPPLQ*LRMSPS
Trigger: GGAGGGAGACATCCTCAGGCATTGAAGTGGAGGCCT...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTTGCCTCGACTTTCTGTaGTGGTGCGGTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVCLDFL*WCGWGH
Trigger: GTGGCCCCAACCGCACCAGCACAGAAAGTCGAGGCA...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCTGCCTCGACTTTCTGTaGTGGTGCGGTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLCLDFL*WCGWGH
Trigger: GTGGCCCCAACCGCACCAGCACAGAAAGTCGAGGCA...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGTRRRG*SSSSSS
Trigger: AGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGT...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR GCA 90 bp TCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTTAAGCTTCAGCTGTGGGTaGCCAGATCTTCACATCATG +
Preference number: 4 (lower is better)
Translates to: SGPEYLVTSPDLSECQDLSFSCG*PDLHIM
Trigger: CATGATGTGAAGATCTGGGCACCCACAGCTGAAGCT...TAAGTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp CACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HRGKLTPGVTSTPLLLFTGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...AGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR GCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCGATCAAGCATCAAAGTaGTCTTGGGAGACTAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPDQASK*SWETKG
Trigger: CCCCTTAGTCTCCCAAGAGCACTTTGATGCTTGATC...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGCCCGCTTCCCGTCTTaGGTCATCCTTCTGCTAGCG +
Preference number: 4 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSARFPS*VILLLA
Trigger: CGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGC...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR CCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCGCCCGCTTCCCGTCTTaGGTCATCCTTCTGCTAGCG +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLARFPS*VILLLA
Trigger: CGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGC...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTGCCCGCTTCCCGTCTTaGGTCATCCTTCTGCTAGCG +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPARFPS*VILLLA
Trigger: CGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGC...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAAGCCAGGTGCCGCGCTaGTTAAAGTGCAGGGTATTG +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPSQVPR*LKCRVL
Trigger: CAATACCCTGCACTTTAACCAGCGCGGCACCTGGCT...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACTCAAAGTCCAGTACTaGCTGCCGCCGTACCCAATC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGLKVQY*LPPYPI
Trigger: GATTGGGTACGGCGGCAGCCAGTACTGGACTTTGAG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp GGGCTGGGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTGACGCTCCCTTGTGCTaGGCCACACGTTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: GLGECREWDQASKCSWETDAPLC*ATRFVF
Trigger: GAATACAAAACGTGTGGCCCAGCACAAGGGAGCGTC...AGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTCACCAGTTTCGACGCTaGGCGGTCTTGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLHQFRR*AVLSQV
Trigger: GACCTGAGACAAGACCGCCCAGCGTCGAAACTGGTG...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTGCCGAGTCCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATCAAACAGGTCAGTTTaGTGCAAGCTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LPSPMHLSIEPHSRAQLPSNRSV*CKLSSS
Trigger: GGATGAAGATAGCTTGCACCAAACTGACCTGTTTGA...TGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGGACTCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp GGGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCAAACAGGTCAGTTTaGTGCAAGCTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: GSRQRTSGPEYLVTSPDLSNRSV*CKLSSS
Trigger: GGATGAAGATAGCTTGCACCAAACTGACCTGTTTGA...CAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CCA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTCAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQAQSPRL*PQPQVL
Trigger: GAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTG...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTATGTGTCTGAGGAGCTaGGAGACTCATCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPMCLRS*ETHQSP
Trigger: CGGACTCTGATGAGTCTCCCAGCTCCTCAGACACAT...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATCAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTACAGCAGCCAACATCTaGTCTCAGAGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCTAANI*SQSCWE
Trigger: TTCCCAGCAGCTCTGAGACCAGATGTTGGCTGCTGT...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTGCCGAGTCCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCAAAATTCCAGAGTGCATaGTTTTTAGCCCACCCTATC +
Preference number: 4 (lower is better)
Translates to: LPSPMHLSIEPHSRAQLPKFQSA*FLAHPI
Trigger: GATAGGGTGGGCTAAAAACCATGCACTCTGGAATTT...TGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGGACTCGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGGCATCAAAGTGCTCTTaGGAGACTAAGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGASKCS*ETKGLS
Trigger: GGACAGCCCCTTAGTCTCCCAAGAGCACTTTGATGC...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp GGGCTGGGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTGAAGTAAGGCCAGGCTaGGCTCCTGAGAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: GLGECREWDQASKCSWETEVRPG*APEKIG
Trigger: ACCTATTTTCTCAGGAGCTCAGCCTGGCCTTACTTC...AGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCCCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGTCCTCCTTTTATCACTaGAGTAAGGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLSSFYH*SKARLS
Trigger: GCTCAGCCTGGCCTTACTTCAGTGATAAAAGGAGGA...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGGTCCTTATCTTCACCTaGGCTCTCTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGVLIFT*ALCVCA
Trigger: GGCACAGACACAGAGAGCTCAGGTGAAGATAAGGAC...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGCGTCTCTGTCTCAGGTaGTGCATAAGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGRLCLR*CIRNHS
Trigger: GCTGTGGTTCCTTATGCATCACCTGAGACAGAGACG...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAACTCGTCCGATGTGTCTaGGGAGCTGGGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQLVRCV*GAGRLI
Trigger: GATGAGTCTCCCAGCTCCTCAGACACATCGGACGAG...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTCTGGCCCCTTGGTACTaGATAGCCAGTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSLAPWY*IASCSP
Trigger: GGGGGAACAACTGGCTATTCAGTACCAAGGGGCCAG...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTTACACAGAGGTAAACTaGCCCCAGGTGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPYTEVN*PQVSLP
Trigger: TGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTA...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACGGAAGGAAAAGACCTaGGCGCTAAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGRKEKT*ALRAWD
Trigger: ATCCCAAGCTCTTAGCGCTCAGGTCTTTTCCTTCCG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610139.5
CDS-3UTR TCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACGATTCACTGAAGGACTaGGGAAAGGGCAACCAGTAC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHDSLKD*GKGNQY
Trigger: GTACTGGTTGCCCTTTCCTCAGTCCTTCAGTGAATC...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368073.7
CDS-3UTR GCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACCCTTCTGCTAGCGGCTaGTCCGACTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHPSASG*SDCSRP
Trigger: GGGCCTGGAACAGTCGGAGCAGCCGCTAGCAGAAGG...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR GCA 90 bp TCTCAGGTGATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGTGCCTCGACTTTCTGTaGTGGTGCGGTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SQVMHKEPQHVTIKQVSLCLDFL*WCGWGH
Trigger: GTGGCCCCAACCGCACCAGCACAGAAAGTCGAGGCA...CAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCATCACCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLTRRRG*SSSSSS
Trigger: AGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGT...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACCCCTCAAGCCCATGCTaGAGGCGGAAACGCTGCACA +
Preference number: 4 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNPSSPC*RRKRCT
Trigger: TGTGCAGCGTTTCCGCCTGCAGCATGGGCTTGAGGG...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTAGCTTCAGCTGTGGGTaGCCAGATCTTCACATCATG +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCSFSCG*PDLHIM
Trigger: CATGATGTGAAGATCTGGGCACCCACAGCTGAAGCT...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTAGCTTCAGCTGTGGGTaGCCAGATCTTCACATCATG +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTSFSCG*PDLHIM
Trigger: CATGATGTGAAGATCTGGGCACCCACAGCTGAAGCT...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGAACAGGTCAGTTTGGTaGAAGCTATCTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: RTSGPEYLVTSPDLSECQNRSVW*KLSSSR
Trigger: GCGGGATGAAGATAGCTTGCACCAAACTGACCTGTT...CTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGAGTACCACAATAGTCTaGAGTGGTGGCACCACCCTA +
Preference number: 4 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLSTTIV*SGGTTL
Trigger: TAGGGTGGTGCCACCACTGCAGACTATTGTGGTACT...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTAGTACCACAATAGTCTaGAGTGGTGGCACCACCCTA +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCSTTIV*SGGTTL
Trigger: TAGGGTGGTGCCACCACTGCAGACTATTGTGGTACT...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTCCGGCCCCGTTTaGGACGATGTGCTCGAGAAG +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSLSGPV*DDVLEK
Trigger: CTTCTCGAGCACATCGTCGCAAACGGGGCCGGAAAG...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS-3UTR CCA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGTCCAGACATCTCCTCTaGACTGCTAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGSRHLL*TARQAS
Trigger: GGAAGCCTGTCTAGCAGTCCAGAGGAGATGTCTGGA...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGATCCAGACATCTCCTCTaGACTGCTAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGSRHLL*TARQAS
Trigger: GGAAGCCTGTCTAGCAGTCCAGAGGAGATGTCTGGA...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTCGACTTTCTGTGCTaGTGCGGTTGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSLDFLC*CGWGHH
Trigger: ATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGAG...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTCGACTTTCTGTGCTaGTGCGGTTGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLLDFLC*CGWGHH
Trigger: ATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGAG...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTCTCGACTTTCTGTGCTaGTGCGGTTGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPLDFLC*CGWGHH
Trigger: ATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGAG...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp GGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTAAGGGGTCATCTGATGAGTCCTaGTCACGGTTAGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GECREWDQASKCSWETKGSSDES*SRLARL
Trigger: CAAGCGGGCTAACCGTGACCAGGACTCATCAGATGA...CCCCTTAGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGATCATCTGATGAGTCCTaGTCACGGTTAGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGSSDES*SRLARL
Trigger: CAAGCGGGCTAACCGTGACCAGGACTCATCAGATGA...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCCAAACTGGTGGGTATTaGCAGGATTCACATAGATCG +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPQTGGY*QDSHRS
Trigger: CGATCTATGTGAATCCTGCCAATACCCACCAGTTTG...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATCAGAGTCCGCGTCTGTaGCCCCAACCCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDQSPRL*PQPQVL
Trigger: GAGAACCTGGGGTTGGGGCCACAGACGCGGACTCTG...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGAAACCAAAGAGAGAGTaGCACTCCTACCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGKPKRE*HSYPPL
Trigger: GAGTGGAGGGTAGGAGTGCCACTCTCTCTTTGGTTT...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGTTCAATAGTCTGCAGTGGTaGCACCACCCTAAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: SGTPTLHSGPLVLNSQLFNSLQW*HHPKVV
Trigger: AACTACTTTAGGGTGGTGCCACCACTGCAGACTATT...GAACAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTGGCATGAAGTTGGATaGCTTAATGATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQWHEVG*LNDQAA
Trigger: AGCTGCTTGATCATTAAGCCATCCAACTTCATGCCA...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTACAGCAGCCAACATCTaGTCTCAGAGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSTAANI*SQSCWE
Trigger: TTCCCAGCAGCTCTGAGACCAGATGTTGGCTGCTGT...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCGGGGAATGTAGAGAATaGGATCAAGCATCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPGECRE*DQASKC
Trigger: GCACTTTGATGCTTGATCCCATTCTCTACATTCCCC...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461888.5
3UTR CAA 72 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTaGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYS*LVHSSGLSFSW
Trigger: CCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGAGCCAGGCTGAGCTCCTaGGAAAATAGGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGARLSS*ENRSVD
Trigger: ATCTACAGACCTATTTTCTCAGGAGCTCAGCCTGGC...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610139.5
CDS-3UTR TCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAGAAGTAAGGCCAGGCTaGGCTCCTGAGAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPEVRPG*APEKIG
Trigger: ACCTATTTTCTCAGGAGCTCAGCCTGGCCTTACTTC...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGATCCTCCTTTTATCACTaGAGTAAGGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGSSFYH*SKARLS
Trigger: GCTCAGCCTGGCCTTACTTCAGTGATAAAAGGAGGA...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTACTCCACTTCAATGCCTaGGGATGTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLLHFNA*GCLPPL
Trigger: GAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAG...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCGCTCAAACTCAGGTCTaGGGCCTCCACTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLAQTQV*GLHFNA
Trigger: GGCATTGAAGTGGAGGCCTCAGACCTGAGTTTGAGC...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTGCTCAAACTCAGGTCTaGGGCCTCCACTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPAQTQV*GLHFNA
Trigger: GGCATTGAAGTGGAGGCCTCAGACCTGAGTTTGAGC...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTACACAAGACAGGTaGTGTTTGCTTTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLCTQDR*CLLWTH
Trigger: GTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACA...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTCTGGCCCCTTGGTACTaGATAGCCAGTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSLAPWY*IASCSP
Trigger: GGGGGAACAACTGGCTATTCAGTACCAAGGGGCCAG...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTGACCTATTTAGGGGGTaGTGGGATGAAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTDLFRG*WDEEKR
Trigger: TCTCTTCTCTTCATCCCATCACCCCCTAAATAGGTC...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCAGGCCTCCACTTCAATaGCTGAGGATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSRPPLQ*LRMSPS
Trigger: GGAGGGAGACATCCTCAGGCATTGAAGTGGAGGCCT...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCGACTTTCTGTGCTGGTaGGGTTGGGGCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSDFLCW*GWGHHH
Trigger: ATGATGGTGGCCCCAACCGCACCAGCACAGAAAGTC...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCGACTTTCTGTGCTGGTaGGGTTGGGGCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLDFLCW*GWGHHH
Trigger: ATGATGGTGGCCCCAACCGCACCAGCACAGAAAGTC...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLTRRRG*SSSSSS
Trigger: AGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGT...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGCCTTCAGGTCATCGCTaGCACTGGCCAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKPSGHR*HWPARC
Trigger: GCACCTGGCTGGCCAGTGGCAGCGATGACCTGAAGG...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAATGGGACGCTCCCTTGTaGTGGGCCACACGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQWDAPL*WATRFV
Trigger: TACAAAACGTGTGGCCCAGCACAAGGGAGCGTCCCA...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGAACAGGTCAGTTTGGTaGAAGCTATCTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLNRSVW*KLSSSR
Trigger: GCGGGATGAAGATAGCTTGCACCAAACTGACCTGTT...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp CTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTATCCAGACATCTCCTCTaGACTGCTAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LVTIHRGKLTPGVTSTPLSRHLL*TARQAS
Trigger: GGAAGCCTGTCTAGCAGTCCAGAGGAGATGTCTGGA...TAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTAGCCAGGTGCCGCGCTaGTTAAAGTGCAGGGTATTG +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPSQVPR*LKCRVL
Trigger: CAATACCCTGCACTTTAACCAGCGCGGCACCTGGCT...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCGGTCATCGCTGCCACTaGCCAGCCAGGTGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPGHRCH*PARCRA
Trigger: AGCGCGGCACCTGGCTGGCCAGTGGCAGCGATGACC...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTCTCAAAGTCCAGTACTaGCTGCCGCCGTACCCAATC +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPLKVQY*LPPYPI
Trigger: GATTGGGTACGGCGGCAGCCAGTACTGGACTTTGAG...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTTCTTGCAACACTGTGTaGCAGACAGTTCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPSCNTV*QTVLLL
Trigger: GAGTAGCAGAACTGTCTGCCACACAGTGTTGCAAGA...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTCTTGCAACACTGTGTaGCAGACAGTTCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGSCNTV*QTVLLL
Trigger: GAGTAGCAGAACTGTCTGCCACACAGTGTTGCAAGA...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CCA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACTCCAGTGCCAACTTGTaGGACGCTCCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNSSANL*DAPLCW
Trigger: CCAGCACAAGGGAGCGTCCCACAAGTTGGCACTGGA...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACCACCAGTTTCGACGCTaGGCGGTCTTGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNHQFRR*AVLSQV
Trigger: GACCTGAGACAAGACCGCCCAGCGTCGAAACTGGTG...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTCACCAGTTTCGACGCTaGGCGGTCTTGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSHQFRR*AVLSQV
Trigger: GACCTGAGACAAGACCGCCCAGCGTCGAAACTGGTG...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGTTCTCAAACAGGTCAGTTTaGTGCAAGCTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: SGTPTLHSGPLVLNSQLFSNRSV*CKLSSS
Trigger: GGATGAAGATAGCTTGCACCAAACTGACCTGTTTGA...GAACAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCTCAAACAGGTCAGTTTaGTGCAAGCTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPSNRSV*CKLSSS
Trigger: GGATGAAGATAGCTTGCACCAAACTGACCTGTTTGA...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CCA 90 bp ACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGGACTCAAACAGGTCAGTTTaGTGCAAGCTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: TSGPEYLVTSPDLSECQDSNRSV*CKLSSS
Trigger: GGATGAAGATAGCTTGCACCAAACTGACCTGTTTGA...GTCCTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCCTAGGTACTCTTTGTTaGTTCACTCCTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPLGTLC*FTPLVC
Trigger: ACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAG...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAAAACCAAAGAGAGAGTaGCACTCCTACCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPKPKRE*HSYPPL
Trigger: GAGTGGAGGGTAGGAGTGCCACTCTCTCTTTGGTTT...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTGTGAAGAGTGTGGGATaGTTAGGGGCTTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPVKSVG*LGALRT
Trigger: AGTCCTTAAAGCCCCTAACCATCCCACACTCTTCAC...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTAGACAGGCCAGCCTCTaGTTAGAAGAGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLRQASL*LEEPSL
Trigger: CAAGGATGGCTCTTCTAACCAGAGGCTGGCCTGTCT...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCTCAGGTGATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGGACAAATGCTGGCCTaGGAGAGGGCATTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SQVMHKEPQHVTIKQVSLGQMLA*ERAFSP
Trigger: AGGGCTGAATGCCCTCTCCCAGGCCAGCATTTGTCC...CAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCATCACCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR CCA 90 bp CCGGTGATGGCGTCTCTGTCTCAGGTGATGCATAAGGAACCACAGCATGTGACTACCTGTCTGGGCAAATaGGTTAATCATCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: PVMASLSQVMHKEPQHVTTCLGK*VNHQTL
Trigger: CAGGGTTTGATGATTAACCCATTTGCCCAGACAGGT...AGTCACATGCTGTGGTTCCTTATGCATCACCTGAGACAGAGACGCCATCACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490368.5
3UTR CAA 72 bp TTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FQGSTPIPRYSL*VHSSGLSFSWD
Trigger: ATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp CACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTGCCAGGCTGAGCTCCTaGGAAAATAGGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HRGKLTPGVTSTPLLLFTARLSS*ENRSVD
Trigger: ATCTACAGACCTATTTTCTCAGGAGCTCAGCCTGGC...AGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTTCCTCCTTTTATCACTaGAGTAAGGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KGKSQSLVTIHRGKLTPGSSFYH*SKARLS
Trigger: GCTCAGCCTGGCCTTACTTCAGTGATAAAAGGAGGA...ACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTCTTTGCTGGACATCTTaGATGATGTTTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCLCWTS*MMFAVA
Trigger: GGCTACAGCAAACATCATTCAAGATGTCCAGCAAAG...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCGTCCTTATCTTCACCTaGGCTCTCTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSVLIFT*ALCVCA
Trigger: GGCACAGACACAGAGAGCTCAGGTGAAGATAAGGAC...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGTCCTTATCTTCACCTaGGCTCTCTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSVLIFT*ALCVCA
Trigger: GGCACAGACACAGAGAGCTCAGGTGAAGATAAGGAC...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTGTCCTTATCTTCACCTaGGCTCTCTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPVLIFT*ALCVCA
Trigger: GGCACAGACACAGAGAGCTCAGGTGAAGATAAGGAC...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTAGGAACCACAGCATGTaGCTATCAAACAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTRNHSM*LSNRSV
Trigger: AACTGACCTGTTTGATAGTCACATGCTGTGGTTCCT...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATCTCGTCCGATGTGTCTaGGGAGCTGGGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDLVRCV*GAGRLI
Trigger: GATGAGTCTCCCAGCTCCTCAGACACATCGGACGAG...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTTGTTCGGTAAGTACAGAGAATaGATAAGGTGGAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SGTPTLHSGPLVLNSQLFGKYRE*IRWKGK
Trigger: CTTTCCTTTCCACCTTATTCATTCTCTGTACTTACC...GAACAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGATACACAGAGGTAAACTaGCCCCAGGTGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGYTEVN*PQVSLP
Trigger: TGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTA...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTCATGCACCCTACCTATaGGGCTTCCAACAGTCCACA +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPHAPYL*GFQQST
Trigger: TGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATG...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp AGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGATCTTGAATGATGTTTaGTGTAGCCAGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RTSGPEYLVTSPDLSECQILNDV*CSQPFL
Trigger: GAGGAAAGGCTGGCTACAGCAAACATCATTCAAGAT...CTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTTCTGCCATCTGTGCTaGTCCCTTTGCTGGACATCT +
Preference number: 4 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLFCHLC*SLCWTS
Trigger: AGATGTCCAGCAAAGGGAGCAGCACAGATGGCAGAA...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTAGGCCTCCACTTCAATaGCTGAGGATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQARPPLQ*LRMSPS
Trigger: GGAGGGAGACATCCTCAGGCATTGAAGTGGAGGCCT...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAAGGCCTCCACTTCAATaGCTGAGGATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLRPPLQ*LRMSPS
Trigger: GGAGGGAGACATCCTCAGGCATTGAAGTGGAGGCCT...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAGACTTTCTGTGCTGGTaGGGTTGGGGCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLDFLCW*GWGHHH
Trigger: ATGATGGTGGCCCCAACCGCACCAGCACAGAAAGTC...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTAGCTCTCTGTGTCTGTaGCTCGACTTTCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPSSLCL*LDFLCW
Trigger: CCAGCACAGAAAGTCGAGGCACAGACACAGAGAGCT...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAAACAGGTCAGTTTGGTaGAAGCTATCTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPNRSVW*KLSSSR
Trigger: GCGGGATGAAGATAGCTTGCACCAAACTGACCTGTT...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATGGGACAGGAAAGGGTTaGCCAGGCAGGATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDGTGKG*PGRIRL
Trigger: CAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCC...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTGGACAGGGAGATTGCTaGCACCAAACAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCGQGDC*HQTMFL
Trigger: AAGAAACATTGTTTGGTGGCAGCAATCTCCCTGTCC...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTTCCAGACATCTCCTCTaGACTGCTAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPSRHLL*TARQAS
Trigger: GGAAGCCTGTCTAGCAGTCCAGAGGAGATGTCTGGA...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCTTGACACAACCAGTATaGCCCTCAAGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLLTQPV*PSSPCC
Trigger: GCAGCATGGGCTTGAGGGCCATACTGGTTGTGTCAA...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTTTGACACAACCAGTATaGCCCTCAAGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPLTQPV*PSSPCC
Trigger: GCAGCATGGGCTTGAGGGCCATACTGGTTGTGTCAA...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAAGCCAGGTGCCGCGCTaGTTAAAGTGCAGGGTATTG +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSQVPR*LKCRVL
Trigger: CAATACCCTGCACTTTAACCAGCGCGGCACCTGGCT...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTGGAAGAAACTTGGCCTaGAACACATTACTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLGRNLA*NTLLLW
Trigger: CCACAAAAGTAATGTGTTCCAGGCCAAGTTTCTTCC...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACTCCAGTGCCAACTTGTaGGACGCTCCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHSSANL*DAPLCW
Trigger: CCAGCACAAGGGAGCGTCCCACAAGTTGGCACTGGA...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACCAAACTGGTGGGTATTaGCAGGATTCACATAGATCG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHQTGGY*QDSHRS
Trigger: CGATCTATGTGAATCCTGCCAATACCCACCAGTTTG...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATACAGGCAGGATCAGGTTaGCAGCCCCAGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRIQAGSG*QPQPAP
Trigger: TGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTG...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTAAACCAAAGAGAGAGTaGCACTCCTACCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: HRGKLTPGVTSTPLLLFTKPKRE*HSYPPL
Trigger: GAGTGGAGGGTAGGAGTGCCACTCTCTCTTTGGTTT...AGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAGTGAAGAGTGTGGGATaGTTAGGGGCTTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPVKSVG*LGALRT
Trigger: AGTCCTTAAAGCCCCTAACCATCCCACACTCTTCAC...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCAAGACAGGCCAGCCTCTaGTTAGAAGAGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSRQASL*LEEPSL
Trigger: CAAGGATGGCTCTTCTAACCAGAGGCTGGCCTGTCT...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTAATAGTCTGCAGTGGTaGCACCACCCTAAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTNSLQW*HHPKVV
Trigger: AACTACTTTAGGGTGGTGCCACCACTGCAGACTATT...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTCACAATAGTCTGCAGTaGTGGCACCACCCTAAAGTA +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSHNSLQ*WHHPKV
Trigger: TACTTTAGGGTGGTGCCACCACTGCAGACTATTGTG...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTACAGAATTCTTGGTTaGATCTTGTGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHYRILG*ILWNWG
Trigger: CCCCCAGTTCCACAAGATCCAACCAAGAATTCTGTA...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACTGGTCTCAGAGCTGCTaGGAAAAGGGGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNWSQSC*EKGQEE
Trigger: TTCCTCCTGCCCCTTTTCCCAGCAGCTCTGAGACCA...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTCTGGGCCAGAGTACCTaGTCACTTCACCAGACCTGT +
Preference number: 4 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQALGQST*SLHQTC
Trigger: ACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAG...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACTCCCTTGCCTCACCTaGAACACATTACTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGLPCLT*NTLLLW
Trigger: CCACAAAAGTAATGTGTTCCAGGTGAGGCAAGGGAG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR CAA 72 bp AAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTaGGTGCAAGCTATCTTCATCCCGCTCCCGCTTGTT +
Preference number: 4 (lower is better)
Translates to: KEPQHVTIKQVS*VQAIFIPLPLV
Trigger: AACAAGCGGGAGCGGGATGAAGATAGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR TCA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGCCAGGCTGAGCTCCTaGGAAAATAGGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSARLSS*ENRSVD
Trigger: ATCTACAGACCTATTTTCTCAGGAGCTCAGCCTGGC...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCAGAAGTAAGGCCAGGCTaGGCTCCTGAGAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSEVRPG*APEKIG
Trigger: ACCTATTTTCTCAGGAGCTCAGCCTGGCCTTACTTC...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCGAAGTAAGGCCAGGCTaGGCTCCTGAGAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLEVRPG*APEKIG
Trigger: ACCTATTTTCTCAGGAGCTCAGCCTGGCCTTACTTC...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610139.5
CDS-3UTR TCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCACTTTGCTGGACATCTTaGATGATGTTTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPLCWTS*MMFAVA
Trigger: GGCTACAGCAAACATCATTCAAGATGTCCAGCAAAG...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACTTTGCTGGACATCTTaGATGATGTTTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGLCWTS*MMFAVA
Trigger: GGCTACAGCAAACATCATTCAAGATGTCCAGCAAAG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATGCTCAAACTCAGGTCTaGGGCCTCCACTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDAQTQV*GLHFNA
Trigger: GGCATTGAAGTGGAGGCCTCAGACCTGAGTTTGAGC...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAGTCCTTATCTTCACCTaGGCTCTCTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLVLIFT*ALCVCA
Trigger: GGCACAGACACAGAGAGCTCAGGTGAAGATAAGGAC...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAAGGAACCACAGCATGTaGCTATCAAACAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPRNHSM*LSNRSV
Trigger: AACTGACCTGTTTGATAGTCACATGCTGTGGTTCCT...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGAGGAACCACAGCATGTaGCTATCAAACAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGRNHSM*LSNRSV
Trigger: AACTGACCTGTTTGATAGTCACATGCTGTGGTTCCT...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR TCA 90 bp GGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTAAGGGGAGGAACCACAGCATGTaGCTATCAAACAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: GECREWDQASKCSWETKGRNHSM*LSNRSV
Trigger: AACTGACCTGTTTGATAGTCACATGCTGTGGTTCCT...CCCCTTAGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR TCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCTACACAGAGGTAAACTaGCCCCAGGTGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSYTEVN*PQVSLP
Trigger: TGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTA...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR TCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGACAGGAAGGGCAGAAATaGGGATCCTTCCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGQEGQK*GSFHSQ
Trigger: TTGAGAATGGAAGGATCCTCATTTCTGCCCTTCCTG...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTACATGCACCCTACCTATaGGGCTTCCAACAGTCCACA +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLHAPYL*GFQQST
Trigger: TGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATG...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCATTCTGCCATCTGTGCTaGTCCCTTTGCTGGACATCT +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSFCHLC*SLCWTS
Trigger: AGATGTCCAGCAAAGGGAGCAGCACAGATGGCAGAA...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTTTCTGCCATCTGTGCTaGTCCCTTTGCTGGACATCT +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPFCHLC*SLCWTS
Trigger: AGATGTCCAGCAAAGGGAGCAGCACAGATGGCAGAA...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAAGCTCTCTGTGTCTGTaGCTCGACTTTCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSSLCL*LDFLCW
Trigger: CCAGCACAGAAAGTCGAGGCACAGACACAGAGAGCT...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACAAGACAGGTGATGTTTaGTTTGGACTCACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHKTGDV*FGLTVH
Trigger: GTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTT...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATCAAGATGGCATGCACTaGACCCGGTCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYQDGMH*TRSGPS
Trigger: GGAGGGCCCTGACCGGGTGCAGTGCATGCCATCTTG...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCAAGATGGCATGCACTaGACCCGGTCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLQDGMH*TRSGPS
Trigger: GGAGGGCCCTGACCGGGTGCAGTGCATGCCATCTTG...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGAGCTCCCAATCCATGCTaGAGTTCAGATTTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGAPNPC*SSDFSN
Trigger: GTTAGAGAAATCTGAACTGCAGCATGGATTGGGAGC...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGAGTGCTTATACTACACTaGCTCCTACCAGCACACATT +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGVLILH*LLPAHI
Trigger: AATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCAC...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGAGCGGTCATaGACTCGATTTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHSSERS*TRFSSL
Trigger: TAATGATGAAAATCGAGTCCATGACCGCTCAGAGGA...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTTCCTCTGAGCGGTCATaGACTCGATTTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPSSERS*TRFSSL
Trigger: TAATGATGAAAATCGAGTCCATGACCGCTCAGAGGA...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTTCATCTGATGAGTCCTaGTCACGGTTAGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSSSDES*SRLARL
Trigger: CAAGCGGGCTAACCGTGACCAGGACTCATCAGATGA...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTATCATCTGATGAGTCCTaGTCACGGTTAGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSSDES*SRLARL
Trigger: CAAGCGGGCTAACCGTGACCAGGACTCATCAGATGA...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGTCCAGTGCCAACTTGTaGGACGCTCCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKSSANL*DAPLCW
Trigger: CCAGCACAAGGGAGCGTCCCACAAGTTGGCACTGGA...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTAAGGGGCAAACTGGTGGGTATTaGCAGGATTCACATAGATCG +
Preference number: 4 (lower is better)
Translates to: GECREWDQASKCSWETKGQTGGY*QDSHRS
Trigger: CGATCTATGTGAATCCTGCCAATACCCACCAGTTTG...CCCCTTAGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp TCTCAGGTGATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGATGTGTCTGAGGAGCTaGGAGACTCATCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: SQVMHKEPQHVTIKQVSLMCLRS*ETHQSP
Trigger: CGGACTCTGATGAGTCTCCCAGCTCCTCAGACACAT...CAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCATCACCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CCA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACCTAGGTACTCTTTGTTaGTTCACTCCTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHLGTLC*FTPLVC
Trigger: ACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAG...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTAATAGTCTGCAGTGGTaGCACCACCCTAAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSNSLQW*HHPKVV
Trigger: AACTACTTTAGGGTGGTGCCACCACTGCAGACTATT...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTCACAATAGTCTGCAGTaGTGGCACCACCCTAAAGTA +
Preference number: 4 (lower is better)
Translates to: KGKSQSLVTIHRGKLTPGHNSLQ*WHHPKV
Trigger: TACTTTAGGGTGGTGCCACCACTGCAGACTATTGTG...ACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTTGGCATGAAGTTGGATaGCTTAATGATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPWHEVG*LNDQAA
Trigger: AGCTGCTTGATCATTAAGCCATCCAACTTCATGCCA...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCTCCTCCTTTTATCACTaGAGTAAGGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTSSFYH*SKARLS
Trigger: GCTCAGCCTGGCCTTACTTCAGTGATAAAAGGAGGA...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGGCTCAAACTCAGGTCTaGGGCCTCCACTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKAQTQV*GLHFNA
Trigger: GGCATTGAAGTGGAGGCCTCAGACCTGAGTTTGAGC...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGACCTATTTAGGGGGTaGTGGGATGAAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSDLFRG*WDEEKR
Trigger: TCTCTTCTCTTCATCCCATCACCCCCTAAATAGGTC...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCAGGAAGGGCAGAAATaGGGATCCTTCCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSQEGQK*GSFHSQ
Trigger: TTGAGAATGGAAGGATCCTCATTTCTGCCCTTCCTG...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCACAGGAAGGGCAGAAATaGGGATCCTTCCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSQEGQK*GSFHSQ
Trigger: TTGAGAATGGAAGGATCCTCATTTCTGCCCTTCCTG...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTAGAAGGGCTAGGATTTaGACTCAGGCAGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPRRARI*TQAVWF
Trigger: GAACCAAACTGCCTGAGTTCAAATCCTAGCCCTTCT...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGAATCTTGAATGATGTTTaGTGTAGCCAGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGILNDV*CSQPFL
Trigger: GAGGAAAGGCTGGCTACAGCAAACATCATTCAAGAT...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTTTCTGCCATCTGTGCTaGTCCCTTTGCTGGACATCT +
Preference number: 4 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSFCHLC*SLCWTS
Trigger: AGATGTCCAGCAAAGGGAGCAGCACAGATGGCAGAA...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTATTCTGCCATCTGTGCTaGTCCCTTTGCTGGACATCT +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLFCHLC*SLCWTS
Trigger: AGATGTCCAGCAAAGGGAGCAGCACAGATGGCAGAA...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATGCCTCGACTTTCTGTaGTGGTGCGGTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRICLDFL*WCGWGH
Trigger: GTGGCCCCAACCGCACCAGCACAGAAAGTCGAGGCA...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACAGCTCTCTGTGTCTGTaGCTCGACTTTCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHSSLCL*LDFLCW
Trigger: CCAGCACAGAAAGTCGAGGCACAGACACAGAGAGCT...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATAGCTCTCTGTGTCTGTaGCTCGACTTTCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDSSLCL*LDFLCW
Trigger: CCAGCACAGAAAGTCGAGGCACAGACACAGAGAGCT...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAAGACCAGTGTCCTCCATaGTGTCAGAGTCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQDQCPP*CQSPYL
Trigger: AAGATAAGGACTCTGACAGCATGGAGGACACTGGTC...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCGACCAGTGTCCTCCATaGTGTCAGAGTCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLDQCPP*CQSPYL
Trigger: AAGATAAGGACTCTGACAGCATGGAGGACACTGGTC...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATACCCTCAAGCCCATGCTaGAGGCGGAAACGCTGCACA +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRIPSSPC*RRKRCT
Trigger: TGTGCAGCGTTTCCGCCTGCAGCATGGGCTTGAGGG...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCCCCTCAAGCCCATGCTaGAGGCGGAAACGCTGCACA +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPPSSPC*RRKRCT
Trigger: TGTGCAGCGTTTCCGCCTGCAGCATGGGCTTGAGGG...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGGGGAGAGGCCATTTCTaGCGAGTCCTATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKGRGHF*RVLCTS
Trigger: AGAGGTGCATAGGACTCGGCAGAAATGGCCTCTCCC...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAGTACCACAATAGTCTaGAGTGGTGGCACCACCCTA +
Preference number: 4 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNSTTIV*SGGTTL
Trigger: TAGGGTGGTGCCACCACTGCAGACTATTGTGGTACT...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGACAACAAATTCCAGAGTaGATGGTTTTTAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGQQIPE*MVFSPP
Trigger: GGGTGGGCTAAAAACCATGCACTCTGGAATTTGTTG...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACAACAAATTCCAGAGTaGATGGTTTTTAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: LVTIHRGKLTPGVTSTPLQQIPE*MVFSPP
Trigger: GGGTGGGCTAAAAACCATGCACTCTGGAATTTGTTG...TAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCTCTCAGTTGCTATTATaGTCCCTTGCCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLSQLLL*SLASPG
Trigger: TCCAGGTGAGGCAAGGGAGCATAATAGCAACTGAGA...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTTCTCAGTTGCTATTATaGTCCCTTGCCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPSQLLL*SLASPG
Trigger: TCCAGGTGAGGCAAGGGAGCATAATAGCAACTGAGA...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACTCCAGACATCTCCTCTaGACTGCTAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHSRHLL*TARQAS
Trigger: GGAAGCCTGTCTAGCAGTCCAGAGGAGATGTCTGGA...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp GGGCTGGGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTAACACATTACTTTTGTaGCCACTCTCAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLGECREWDQASKCSWETNTLLL*PLSKSS
Trigger: ACTGGACTTTGAGAGTGGCCACAAAAGTAATGTGTT...AGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CCA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGAAGAAACTTGGCCTaGAACACATTACTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSGRNLA*NTLLLW
Trigger: CCACAAAAGTAATGTGTTCCAGGCCAAGTTTCTTCC...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCATCTTGCAACACTGTGTaGCAGACAGTTCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSSCNTV*QTVLLL
Trigger: GAGTAGCAGAACTGTCTGCCACACAGTGTTGCAAGA...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTTCTTGCAACACTGTGTaGCAGACAGTTCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVSCNTV*QTVLLL
Trigger: GAGTAGCAGAACTGTCTGCCACACAGTGTTGCAAGA...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATGACGCTCCCTTGTGCTaGGCCACACGTTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDDAPLC*ATRFVF
Trigger: GAATACAAAACGTGTGGCCCAGCACAAGGGAGCGTC...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATATGTGTCTGAGGAGCTaGGAGACTCATCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDMCLRS*ETHQSP
Trigger: CGGACTCTGATGAGTCTCCCAGCTCCTCAGACACAT...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATGGCATGAAGTTGGATaGCTTAATGATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPWHEVG*LNDQAA
Trigger: AGCTGCTTGATCATTAAGCCATCCAACTTCATGCCA...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTTATAAAGAAGGGAACTaGCATGAAGTTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPYKEGN*HEVGWL
Trigger: AAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATA...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTACAGAATTCTTGGTTaGATCTTGTGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLYRILG*ILWNWG
Trigger: CCCCCAGTTCCACAAGATCCAACCAAGAATTCTGTA...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTAGGATACAGAATTCTTaGTTGGATCTTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: PHSRAQLPFLGTLCWFTPRIQNS*LDLVEL
Trigger: CAGTTCCACAAGATCCAACCAAGAATTCTGTATCCT...AGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGAGGAAGAAGTATCTaGGAATACCATTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSGGRSI*EYHSLT
Trigger: AGTGAGAGAATGGTATTCCCAGATACTTCTTCCTCC...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTAAATTCCAGAGTGCATaGTTTTTAGCCCACCCTATC +
Preference number: 4 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSKFQSA*FLAHPI
Trigger: GATAGGGTGGGCTAAAAACCATGCACTCTGGAATTT...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATCTGGCCCCTTGGTACTaGATAGCCAGTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYLAPWY*IASCSP
Trigger: GGGGGAACAACTGGCTATTCAGTACCAAGGGGCCAG...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACTACACAGAGGTAAACTaGCCCCAGGTGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHYTEVN*PQVSLP
Trigger: TGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTA...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTAATCTTGAATGATGTTTaGTGTAGCCAGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVTIHRGKLTPGVTSTPLILNDV*CSQPFL
Trigger: GAGGAAAGGCTGGCTACAGCAAACATCATTCAAGAT...TAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAGACCAGTGTCCTCCATaGTGTCAGAGTCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLDQCPP*CQSPYL
Trigger: AAGATAAGGACTCTGACAGCATGGAGGACACTGGTC...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYTRRRG*SSSSSS
Trigger: AGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGT...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACAGCTTCAGCTGTGGGTaGCCAGATCTTCACATCATG +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHSFSCG*PDLHIM
Trigger: CATGATGTGAAGATCTGGGCACCCACAGCTGAAGCT...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAGGTCAGTTTGGTaGAAGCTATCTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: RYKIRPLTVIGTGRLLPPNRSVW*KLSSSR
Trigger: GCGGGATGAAGATAGCTTGCACCAAACTGACCTGTT...TGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTTCAGCTCCCAATCCATaGTGCAGTTCAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPSAPNP*CSSDFS
Trigger: AGAGAAATCTGAACTGCAGCATGGATTGGGAGCTGA...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGAACACATTTAATAAGCTaGATGCACCCTACCTATGAG +
Preference number: 4 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGTHLIS*MHPTYE
Trigger: CTCATAGGTAGGGTGCATGCAGCTTATTAAATGTGT...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAACAAACTGGTGGGTATTaGCAGGATTCACATAGATCG +
Preference number: 4 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQQTGGY*QDSHRS
Trigger: CGATCTATGTGAATCCTGCCAATACCCACCAGTTTG...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACCACAATAGTCTGCAGTaGTGGCACCACCCTAAAGTA +
Preference number: 4 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNHNSLQ*WHHPKV
Trigger: TACTTTAGGGTGGTGCCACCACTGCAGACTATTGTG...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATATAAAGAAGGGAACTaGCATGAAGTTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPYKEGN*HEVGWL
Trigger: AAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATA...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAATACAGAATTCTTGGTTaGATCTTGTGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQYRILG*ILWNWG
Trigger: CCCCCAGTTCCACAAGATCCAACCAAGAATTCTGTA...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTAGGAGGAAGAAGTATCTaGGAATACCATTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: LVTIHRGKLTPGVTSTPLGGRSI*EYHSLT
Trigger: AGTGAGAGAATGGTATTCCCAGATACTTCTTCCTCC...TAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATGCTCAAACTCAGGTCTaGGGCCTCCACTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYAQTQV*GLHFNA
Trigger: GGCATTGAAGTGGAGGCCTCAGACCTGAGTTTGAGC...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCTGTACACAAGACAGGTaGTGTTTGCTTTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTCTQDR*CLLWTH
Trigger: GTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACA...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAGGAACCACAGCATGTaGCTATCAAACAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: RYKIRPLTVIGTGRLLPPRNHSM*LSNRSV
Trigger: AACTGACCTGTTTGATAGTCACATGCTGTGGTTCCT...TGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGGTAAGTACAGAGAATaGATAAGGTGGAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KGKSQSLVTIHRGKLTPGGKYRE*IRWKGK
Trigger: CTTTCCTTTCCACCTTATTCATTCTCTGTACTTACC...ACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGGACTTTCTGTGCTGGTaGGGTTGGGGCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLDFLCW*GWGHHH
Trigger: ATGATGGTGGCCCCAACCGCACCAGCACAGAAAGTC...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATGACCAGTGTCCTCCATaGTGTCAGAGTCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDDQCPP*CQSPYL
Trigger: AAGATAAGGACTCTGACAGCATGGAGGACACTGGTC...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATTGTGGCAGACAGTTCTaGTACTCGAACCTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYCGRQF*YSNLPV
Trigger: GACGGGCAGGTTCGAGTAGCAGAACTGTCTGCCACA...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATAAGAGTCTGGTTCCAGTaGCAACTTGTGGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRIRVWFQ*QLVGRS
Trigger: GGAGCGTCCCACAAGTTGGCACTGGAACCAGACTCT...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGAGAGTCTGGTTCCAGTaGCAACTTGTGGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLRVWFQ*QLVGRS
Trigger: GGAGCGTCCCACAAGTTGGCACTGGAACCAGACTCT...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCAAAGACAGGTGATGTTTaGTTTGGACTCACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSKTGDV*FGLTVH
Trigger: GTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTT...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTGGACAGGGAGATTGCTaGCACCAAACAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSGQGDC*HQTMFL
Trigger: AAGAAACATTGTTTGGTGGCAGCAATCTCCCTGTCC...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCGGACAGGGAGATTGCTaGCACCAAACAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTGQGDC*HQTMFL
Trigger: AAGAAACATTGTTTGGTGGCAGCAATCTCCCTGTCC...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR GCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCAACAAATTCCAGAGTaGATGGTTTTTAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTQQIPE*MVFSPP
Trigger: GGGTGGGCTAAAAACCATGCACTCTGGAATTTGTTG...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAGCTCCCAATCCATGCTaGAGTTCAGATTTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLAPNPC*SSDFSN
Trigger: GTTAGAGAAATCTGAACTGCAGCATGGATTGGGAGC...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTATTCCAACAGTCCACATaGTCAAGGAATCTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLFQQST*SRNLGL
Trigger: CAACCCTAGATTCCTTGAGCATGTGGACTGTTGGAA...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAGTGCTTATACTACACTaGCTCCTACCAGCACACATT +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLVLILH*LLPAHI
Trigger: AATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCAC...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTAACACATTACTTTTGTaGCCACTCTCAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLNTLLL*PLSKSS
Trigger: ACTGGACTTTGAGAGTGGCCACAAAAGTAATGTGTT...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCATCAAACAGGTCAGTTTaGTGCAAGCTATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSSNRSV*CKLSSS
Trigger: GGATGAAGATAGCTTGCACCAAACTGACCTGTTTGA...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCACTAGGTACTCTTTGTTaGTTCACTCCTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSLGTLC*FTPLVC
Trigger: ACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAG...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CCA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAAGGAGGAAGAAGTATCTaGGAATACCATTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQGGRSI*EYHSLT
Trigger: AGTGAGAGAATGGTATTCCCAGATACTTCTTCCTCC...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATGGTCTCAGAGCTGCTaGGAAAAGGGGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRIWSQSC*EKGQEE
Trigger: TTCCTCCTGCCCCTTTTCCCAGCAGCTCTGAGACCA...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTTTCACCAGACCTGTCTaGGCAAATGGGTTAATCATC +
Preference number: 4 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQAFTRPV*ANGLII
Trigger: GATGATTAACCCATTTGCCCAGACAGGTCTGGTGAA...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR TCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATCTTTGCTGGACATCTTaGATGATGTTTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDLCWTS*MMFAVA
Trigger: GGCTACAGCAAACATCATTCAAGATGTCCAGCAAAG...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACTGTACACAAGACAGGTaGTGTTTGCTTTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHCTQDR*CLLWTH
Trigger: GTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACA...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATACGTCTCTGTCTCAGGTaGTGCATAAGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRIRLCLR*CIRNHS
Trigger: GCTGTGGTTCCTTATGCATCACCTGAGACAGAGACG...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTGGTAAGTACAGAGAATaGATAAGGTGGAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVGKYRE*IRWKGK
Trigger: CTTTCCTTTCCACCTTATTCATTCTCTGTACTTACC...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp AAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTATGAAGAGAAGAGAGTaGAGGATATGTAATCAAGTG +
Preference number: 4 (lower is better)
Translates to: KGKSQSLVTIHRGKLTPGMKRRE*RICNQV
Trigger: CACTTGATTACATATCCTTCACTCTCTTCTCTTCAT...ACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAATGAAGAGAAGAGAGTaGAGGATATGTAATCAAGTG +
Preference number: 4 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGMKRRE*RICNQV
Trigger: CACTTGATTACATATCCTTCACTCTCTTCTCTTCAT...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCTCTCTAACTCATGCCTaGTTCTCTCAGTTGCTATTA +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLSLTHA*FSQLLL
Trigger: TAATAGCAACTGAGAGAATCAGGCATGAGTTAGAGA...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAATCTTGAATGATGTTTaGTGTAGCCAGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLILNDV*CSQPFL
Trigger: GAGGAAAGGCTGGCTACAGCAAACATCATTCAAGAT...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGGACCAGTGTCCTCCATaGTGTCAGAGTCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKDQCPP*CQSPYL
Trigger: AAGATAAGGACTCTGACAGCATGGAGGACACTGGTC...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCGATTTCTCTAACTCATaGCTGATTCTCTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLDFSNS*LILSVA
Trigger: AGCAACTGAGAGAATCAGGCATGAGTTAGAGAAATC...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACACATTTAATAAGCTaGATGCACCCTACCTATGAG +
Preference number: 4 (lower is better)
Translates to: FELRQFGSRACAYTTLPPTHLIS*MHPTYE
Trigger: CTCATAGGTAGGGTGCATGCAGCTTATTAAATGTGT...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCTCCTCTGAGCGGTCATaGACTCGATTTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTSSERS*TRFSSL
Trigger: TAATGATGAAAATCGAGTCCATGACCGCTCAGAGGA...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTATCCTCTGAGCGGTCATaGACTCGATTTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSSERS*TRFSSL
Trigger: TAATGATGAAAATCGAGTCCATGACCGCTCAGAGGA...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGTCATCTGATGAGTCCTaGTCACGGTTAGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLSSDES*SRLARL
Trigger: CAAGCGGGCTAACCGTGACCAGGACTCATCAGATGA...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGTTGACACAACCAGTATaGCCCTCAAGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLLTQPV*PSSPCC
Trigger: GCAGCATGGGCTTGAGGGCCATACTGGTTGTGTCAA...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCTAGGTACTCTTTGTTaGTTCACTCCTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTLGTLC*FTPLVC
Trigger: ACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAG...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTAGGATACAGAATTCTTaGTTGGATCTTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVRIQNS*LDLVEL
Trigger: CAGTTCCACAAGATCCAACCAAGAATTCTGTATCCT...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTTTTTCCCCTCCTTCCTaGCCTGATTTAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSFSPPS*PDLEES
Trigger: AGATTCTTCTAAATCAGGCCAGGAAGGAGGGGAAAA...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCTTTTCCCCTCCTTCCTaGCCTGATTTAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTFSPPS*PDLEES
Trigger: AGATTCTTCTAAATCAGGCCAGGAAGGAGGGGAAAA...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCAAATTCCAGAGTGCATaGTTTTTAGCCCACCCTATC +
Preference number: 4 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTKFQSA*FLAHPI
Trigger: GATAGGGTGGGCTAAAAACCATGCACTCTGGAATTT...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCTCCTCCTTTTATCACTaGAGTAAGGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPSSFYH*SKARLS
Trigger: GCTCAGCCTGGCCTTACTTCAGTGATAAAAGGAGGA...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCGATTCACTGAAGGACTaGGGAAAGGGCAACCAGTAC +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPDSLKD*GKGNQY
Trigger: GTACTGGTTGCCCTTTCCTCAGTCCTTCAGTGAATC...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610139.5
CDS-3UTR TCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTATCTCTAACTCATGCCTaGTTCTCTCAGTTGCTATTA +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSLTHA*FSQLLL
Trigger: TAATAGCAACTGAGAGAATCAGGCATGAGTTAGAGA...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATATCTTGAATGATGTTTaGTGTAGCCAGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDILNDV*CSQPFL
Trigger: GAGGAAAGGCTGGCTACAGCAAACATCATTCAAGAT...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACAAGACAGGTGATGTTTaGTTTGGACTCACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHKTGDV*FGLTVH
Trigger: GTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTT...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAGATTTCTCTAACTCATaGCTGATTCTCTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLDFSNS*LILSVA
Trigger: AGCAACTGAGAGAATCAGGCATGAGTTAGAGAAATC...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp AGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACACATTACTTTTGTaGCCACTCTCAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RYKIRPLTVIGTGRLLPPNTLLL*PLSKSS
Trigger: ACTGGACTTTGAGAGTGGCCACAAAAGTAATGTGTT...TGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAGGATACAGAATTCTTaGTTGGATCTTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNRIQNS*LDLVEL
Trigger: CAGTTCCACAAGATCCAACCAAGAATTCTGTATCCT...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATTTTTCCCCTCCTTCCTaGCCTGATTTAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDFSPPS*PDLEES
Trigger: AGATTCTTCTAAATCAGGCCAGGAAGGAGGGGAAAA...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR TCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCAGAAGGGCTAGGATTTaGACTCAGGCAGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPRRARI*TQAVWF
Trigger: GAACCAAACTGCCTGAGTTCAAATCCTAGCCCTTCT...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR GCA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGATCTTGAATGATGTTTaGTGTAGCCAGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKILNDV*CSQPFL
Trigger: GAGGAAAGGCTGGCTACAGCAAACATCATTCAAGAT...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATAAACAGGTCAGTTTGGTaGAAGCTATCTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRINRSVW*KLSSSR
Trigger: GCGGGATGAAGATAGCTTGCACCAAACTGACCTGTT...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATAGTGAAGAGTGTGGGATaGTTAGGGGCTTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRIVKSVG*LGALRT
Trigger: AGTCCTTAAAGCCCCTAACCATCCCACACTCTTCAC...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCCTCCCTTGCCTCACCTaGAACACATTACTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPLPCLT*NTLLLW
Trigger: CCACAAAAGTAATGTGTTCCAGGTGAGGCAAGGGAG...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCCTTTGCTGGACATCTTaGATGATGTTTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPLCWTS*MMFAVA
Trigger: GGCTACAGCAAACATCATTCAAGATGTCCAGCAAAG...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR TCA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATATGAAGAGAAGAGAGTaGAGGATATGTAATCAAGTG +
Preference number: 4 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDMKRRE*RICNQV
Trigger: CACTTGATTACATATCCTTCACTCTCTTCTCTTCAT...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR GCA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATAGGACAGGGAGATTGCTaGCACCAAACAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: STPLLLFTLKSLYCIQRIGQGDC*HQTMFL
Trigger: AAGAAACATTGTTTGGTGGCAGCAATCTCCCTGTCC...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR GCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCTCAGCTCCCAATCCATaGTGCAGTTCAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPSAPNP*CSSDFS
Trigger: AGAGAAATCTGAACTGCAGCATGGATTGGGAGCTGA...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
3UTR CAA 72 bp ATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTaGTCCTTCTCCTGGGATGTCTTTCTTTTATCTAAA +
Preference number: 4 (lower is better)
Translates to: IPRYSLLVHSSG*SFSWDVFLLSK
Trigger: TTTAGATAAAAGAAAGACATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATGGAAGAAACTTGGCCTaGAACACATTACTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYGRNLA*NTLLLW
Trigger: CCACAAAAGTAATGTGTTCCAGGCCAAGTTTCTTCC...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATAACACATTACTTTTGTaGCCACTCTCAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYNTLLL*PLSKSS
Trigger: ACTGGACTTTGAGAGTGGCCACAAAAGTAATGTGTT...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CCA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCAACACATTACTTTTGTaGCCACTCTCAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLSFYCYLILITLCVISPNTLLL*PLSKSS
Trigger: ACTGGACTTTGAGAGTGGCCACAAAAGTAATGTGTT...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CCA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGTATAAAGAAGGGAACTaGCATGAAGTTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLYKEGN*HEVGWL
Trigger: AAGCCATCCAACTTCATGCCAGTTCCCTTCTTTATA...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS GCA 90 bp GCTAGCGGCTGCTCCGACTGTTCCAGGCCCAGCCGCCCCGTCCACTaGCACCACCAACGCCGCCGCCATCTTACACTGGCCAGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: ASGCSDCSRPSRPVH*HHQRRRHLTLASGR
Trigger: GCGGCCGCTGGCCAGTGTAAGATGGCGGCGGCGTTGGTGGTGGCAGTGGACGGGGCGGCTGGGCCTGGAACAGTCGGAGCAGCCGCTAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326837.6
CDS GCA 90 bp CCAGCGGCCGCCACCACCACCGCCTCCGCTCTCTGCGCTTGCGCCTaGGCTGCCACGCTTTCCGGCCCCGTTTGCGACGATGTGCTCGAG +
Preference number: 5 (lower is better)
Translates to: PAAATTTASALCACA*AATLSGPVCDDVLE
Trigger: CTCGAGCACATCGTCGCAAACGGGGCCGGAAAGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGAGGCGGTGGTGGTGGCGGCCGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS GCA 90 bp GGCCGCCACCACCACCGCCTCCGCTCTCTGCGCTTGCGCCTGCGCTaGCACGCTTTCCGGCCCCGTTTGCGACGATGTGCTCGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: GRHHHRLRSLRLRLR*HAFRPRLRRCARED
Trigger: GTCTTCTCGAGCACATCGTCGCAAACGGGGCCGGAAAGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGAGGCGGTGGTGGTGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS GCA 90 bp CTCAGCAGCCCGCTTCCCGTCTTGGGTCATCCTTCTGCTAGCGGCTaGTCCGACTGTTCCAGGCCCAGCCGCCCCGTCCACTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: LSSPLPVLGHPSASG*SDCSRPSRPVHCHH
Trigger: GTGGTGGCAGTGGACGGGGCGGCTGGGCCTGGAACAGTCGGAGCAGCCGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000407642.6
ENST00000475733.5
CDS CCA 90 bp GAGGACACCCAGTCCTCTAGGGCCCGCTCATCATCTGATGAGTCCTaGTCACGGTTAGCCCGCTTGCGCTGTACACGGCGCCGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: EDTQSSRARSSSDES*SRLARLRCTRRRGC
Trigger: GCAGCCTCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGACCAGGACTCATCAGATGATGAGCGGGCCCTAGAGGACTGGGTGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS CCA 90 bp TACAAGCACGGGAATCGGCGAGGCTCAGCAGCCCGCTTCCCGTCTTaGGTCATCCTTCTGCTAGCGGCTGCTCCGACTGTTCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: YKHGNRRGSAARFPS*VILLLAAAPTVPGP
Trigger: TGGGCCTGGAACAGTCGGAGCAGCCGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCTGCTGAGCCTCGCCGATTCCCGTGCTTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000407642.6
ENST00000419626.1
ENST00000475733.5
ENST00000610139.5
CDS GCA 90 bp TCCTGGTCACGGTTAGCCCGCTTGCGCTGTACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCTTCCTCCTCTTCCTCTTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SWSRLARLRCTRRRG*SSSSSSSSSSSSSE
Trigger: CTCAGAGGAAGAGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS-3UTR CAA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCTCACGGTTAGCCCGCTaGCGCTGTACACGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPSRLAR*RCTRRR
Trigger: TCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGA...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CAA 90 bp GGGCTGGGGGAATGTAGAGAATGGGATCAAGCATCAAAGTGCTCTTGGGAGACTCTCCGCTCTCTGCGCTaGCGCCTGCGCTGCCACGCT +
Preference number: 5 (lower is better)
Translates to: GLGECREWDQASKCSWETLRSLR*RLRCHA
Trigger: AGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGAG...AGTCTCCCAAGAGCACTTTGATGCTTGATCCCATTCTCTACATTCCCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CAA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCTCTGTGCTGGTGCGGTaGGGGCCACCATCATCCCCA +
Preference number: 5 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPSVLVR*GPPSSP
Trigger: TGGGGATGATGGTGGCCCCAACCGCACCAGCACAGA...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CAA 90 bp CAAAGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCTCTGTGCTGGTGCGGTaGGGGCCACCATCATCCCCA +
Preference number: 5 (lower is better)
Translates to: QRESGTPTLHSGPLVLNSSVLVR*GPPSSP
Trigger: TGGGGATGATGGTGGCCCCAACCGCACCAGCACAGA...GCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCTACCACCCCCAACCCTaGTCCCACGCCTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPYHPQP*SHASLV
Trigger: GACAAGGGAGGCGTGGGACAAGGGTTGGGGGTGGTA...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CAA 90 bp AGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTCTGAATGCCAGTCTGTGCTGGTGCGGTaGGGGCCACCATCATCCCCA +
Preference number: 5 (lower is better)
Translates to: RTSGPEYLVTSPDLSECQSVLVR*GPPSSP
Trigger: TGGGGATGATGGTGGCCCCAACCGCACCAGCACAGA...CTGGCATTCAGACAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CAA 90 bp AAGTGCTCTTGGGAGACTAAGGGGCTGTCCTCTGATACCACCCCCAACCCTTGTGGTTCCAGTGCCAACTaGTGGGACGCTCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: KCSWETKGLSSDTTPNPCGSSAN*WDAPLC
Trigger: GCACAAGGGAGCGTCCCACAAGTTGGCACTGGAACC...ACAAGGGTTGGGGGTGGTATCAGAGGACAGCCCCTTAGTCTCCCAAGAGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CAA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTAGCCCGCTTCCCGTCTaGGGTCATCCTTCTGCTAGC +
Preference number: 5 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLSPLPV*GHPSAS
Trigger: GCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCT...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR CAA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCTTGTGGGACGCTCCCTaGTGCTGGGCCACACGTTTT +
Preference number: 5 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPLWDAP*CWATRF
Trigger: AAAACGTGTGGCCCAGCACAAGGGAGCGTCCCACAA...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
CDS-3UTR CAA 90 bp CACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTGGTTCCAGTGCCAACTaGTGGGACGCTCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: HLSIEPHSRAQLPFLGTLGSSAN*WDAPLC
Trigger: GCACAAGGGAGCGTCCCACAAGTTGGCACTGGAACC...AAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTCTCCGCTCTCTGCGCTaGCGCCTGCGCTGCCACGCT +
Preference number: 5 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVLRSLR*RLRCHA
Trigger: AGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGAG...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS GCA 90 bp ACTTCTTTTAGTTCTCTCTGGACCAACCACCTCCGCTGCCTCACCTaGACAGGCAGAGAACAGCTGAGGAGAAGTCAAGGGCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: TSFSSLWTNHLRCLT*TGREQLRRSQGQAW
Trigger: CCATGCCTGCCCTTGACTTCTCCTCAGCTGTTCTCTGCCTGTGCAGGTGAGGCAGCGGAGGTGGTTGGTCCAGAGAGAACTAAAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CCA 90 bp AAACTGGCCTGCAGAATGCTTTTGGAGAATGGACAAATGCTGGCCTaGGAGAGGGCATTCAGCCCTGCATCTCTCACGCCTCCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: KLACRMLLENGQMLA*ERAFSPASLTPPLS
Trigger: GGACAAGGGAGGCGTGAGAGATGCAGGGCTGAATGCCCTCTCCCAGGCCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466253.1
ENST00000490368.5
CDS-3UTR CAA 90 bp CACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTTCACGGTTAGCCCGCTaGCGCTGTACACGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: HRGKLTPGVTSTPLLLFTSRLAR*RCTRRR
Trigger: TCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGA...AGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACACACGTTTTGTATTCTaGCAACACTGTGTGGCAGAC +
Preference number: 5 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHTRFVF*QHCVAD
Trigger: GTCTGCCACACAGTGTTGCAAGAATACAAAACGTGT...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CAA 90 bp CCTATGCACCTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTCTCCACTCTGGCCCCTaGGTACTGAATAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: PMHLSIEPHSRAQLPFLGLHSGP*VLNSQL
Trigger: CAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAG...ACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAGGTGCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CAA 90 bp GCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGGCTTTCCGGCCCCGTTaGCGACGATGTGCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: AKSPKCVSAECRAWDRKGAFRPR*RRCARE
Trigger: TTCTCGAGCACATCGTCGCAAACGGGGCCGGAAAGC...CCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368074.6
CDS-3UTR CAA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTTCACGGTTAGCCCGCTaGCGCTGTACACGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVSRLAR*RCTRRR
Trigger: TCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGA...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp GGGAGCCGACAGAGAACTTCTGGGCCAGAGTACCTGGTCACTTCACCAGACCTGTTAAAGTGCAGGGTATaGACACAACCAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: GSRQRTSGPEYLVTSPDLLKCRV*TQPVWP
Trigger: GGGCCATACTGGTTGTGTCAATACCCTGCACTTTAA...CAGGTCTGGTGAAGTGACCAGGTACTCTGGCCCAGAAGTTCTCTGTCGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CAA 90 bp GTTGGCAGCCCCAGCCTGCCCCACCTAGGTATGAGGCCTCAAGATGGCATGCACCTGTTAGGAAGAAACTaGGCCTGGAACACATTACTT +
Preference number: 5 (lower is better)
Translates to: VGSPSLPHLGMRPQDGMHLLGRN*AWNTLL
Trigger: AAGTAATGTGTTCCAGGCCAAGTTTCTTCCTAACAG...GTGCATGCCATCTTGAGGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461888.5
CDS-3UTR CAA 90 bp AGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTTGTGGGACGCTCCCTaGTGCTGGGCCACACGTTTT +
Preference number: 5 (lower is better)
Translates to: RAPFQGSTPIPRYSLLVHLWDAP*CWATRF
Trigger: AAAACGTGTGGCCCAGCACAAGGGAGCGTCCCACAA...GTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTTGTGGGACGCTCCCTaGTGCTGGGCCACACGTTTT +
Preference number: 5 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCLWDAP*CWATRF
Trigger: AAAACGTGTGGCCCAGCACAAGGGAGCGTCCCACAA...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGACTGAGCGCTAAGAGCTaGGGATACGGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGLSAKS*GYGSGP
Trigger: TGGGCCTGACCCGTATCCCAAGCTCTTAGCGCTCAG...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610139.5
CDS GCA 90 bp CTAAAAGCAAACTGGCCTGCAGAATGCTTTTGGAGAATGGACAAATaGTGGCCTGGGAGAGGGCATTCAGCCCTGCATCTCTCACGCCTC +
Preference number: 5 (lower is better)
Translates to: LKANWPAECFWRMDK*WPGRGHSALHLSRL
Trigger: GAGGCGTGAGAGATGCAGGGCTGAATGCCCTCTCCCAGGCCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466253.1
ENST00000490368.5
CDS CCA 90 bp CTGGCATTGGCTGAGCTAAAAGCAAACTGGCCTGCAGAATGCTTTTaGAGAATGGACAAATGCTGGCCTGGGAGAGGGCATTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LALAELKANWPAECF*RMDKCWPGRGHSAL
Trigger: CAGGGCTGAATGCCCTCTCCCAGGCCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTTAGCTCAGCCAATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466253.1
ENST00000490368.5
CDS-3UTR CAA 90 bp CAAAAGCACTTAAGGGCAAGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTTCTGTGCTGGTGCGGTaGGGGCCACCATCATCCCCA +
Preference number: 5 (lower is better)
Translates to: QKHLRARIQLGLSDSVTSSVLVR*GPPSSP
Trigger: TGGGGATGATGGTGGCCCCAACCGCACCAGCACAGA...ACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCTCTGTGCTGGTGCGGTaGGGGCCACCATCATCCCCA +
Preference number: 5 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLSVLVR*GPPSSP
Trigger: TGGGGATGATGGTGGCCCCAACCGCACCAGCACAGA...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CAA 90 bp CACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTGAGCGCTAAGAGCTaGGGATACGGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: HRGKLTPGVTSTPLLLFTLSAKS*GYGSGP
Trigger: TGGGCCTGACCCGTATCCCAAGCTCTTAGCGCTCAG...AGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368073.7
CDS-3UTR CAA 90 bp TTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTAGCCCGCTTCCCGTCTaGGGTCATCCTTCTGCTAGC +
Preference number: 5 (lower is better)
Translates to: FELRQFGSRACAYTTLPPSPLPV*GHPSAS
Trigger: GCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCT...AGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CAA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTATCTGTGCTGGTGCGGTaGGGGCCACCATCATCCCCA +
Preference number: 5 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSVLVR*GPPSSP
Trigger: TGGGGATGATGGTGGCCCCAACCGCACCAGCACAGA...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CAA 90 bp TGGCCTGATTTAGAAGAATCTGACTGTCCCAGGATACAGAATTCTTGGTTGGATTCACGGTTAGCCCGCTaGCGCTGTACACGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: WPDLEESDCPRIQNSWLDSRLAR*RCTRRR
Trigger: TCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGA...ATCCAACCAAGAATTCTGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTATTGTGGGACGCTCCCTaGTGCTGGGCCACACGTTTT +
Preference number: 5 (lower is better)
Translates to: LVTIHRGKLTPGVTSTPLLWDAP*CWATRF
Trigger: AAAACGTGTGGCCCAGCACAAGGGAGCGTCCCACAA...TAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGATTCCTAGGTACTCTTaGTTGGTTCACTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQIPRYS*LVHSSG
Trigger: ACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CAA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCACTCCACTCTGGCCCCTaGGTACTGAATAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPLHSGP*VLNSQL
Trigger: CAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAG...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCTTAGAAGAGCCATCCTaGGAACCCCCTACAAGACTT +
Preference number: 5 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPLEEPS*EPPTRL
Trigger: AAGTCTTGTAGGGGGTTCCAAGGATGGCTCTTCTAA...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CAAAGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCTTAGAAGAGCCATCCTaGGAACCCCCTACAAGACTT +
Preference number: 5 (lower is better)
Translates to: QRESGTPTLHSGPLVLNSLEEPS*EPPTRL
Trigger: AAGTCTTGTAGGGGGTTCCAAGGATGGCTCTTCTAA...GCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS GCA 90 bp CAAACCCTGGCATTGGCTGAGCTAAAAGCAAACTGGCCTGCAGAATaGTTTTGGAGAATGGACAAATGCTGGCCTGGGAGAGGGCATTCA +
Preference number: 5 (lower is better)
Translates to: QTLALAELKANWPAE*FWRMDKCWPGRGHS
Trigger: TGAATGCCCTCTCCCAGGCCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTTAGCTCAGCCAATGCCAGGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466253.1
ENST00000490368.5
CDS GCA 90 bp AAGAAAACAACTTCTTTTAGTTCTCTCTGGACCAACCACCTCCGCTaGCTCACCTGCACAGGCAGAGAACAGCTGAGGAGAAGTCAAGGG +
Preference number: 5 (lower is better)
Translates to: KKTTSFSSLWTNHLR*LTCTGREQLRRSQG
Trigger: CCCTTGACTTCTCCTCAGCTGTTCTCTGCCTGTGCAGGTGAGGCAGCGGAGGTGGTTGGTCCAGAGAGAACTAAAAGAAGTTGTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS-3UTR CAA 90 bp TTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCCTACCAGCACACATTTAAGCCCGCTTCCCGTCTaGGGTCATCCTTCTGCTAGC +
Preference number: 5 (lower is better)
Translates to: FGSRACAYTTLPPTSTHLSPLPV*GHPSAS
Trigger: GCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCT...TAAATGTGTGCTGGTAGGAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CAA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTGGTTCCAGTGCCAACTaGTGGGACGCTCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSGSSAN*WDAPLC
Trigger: GCACAAGGGAGCGTCCCACAAGTTGGCACTGGAACC...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTCAGGTGATGTTTGCTTaGGACTCACTGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCQVMFA*DSLFTR
Trigger: CCTGGTGAACAGTGAGTCCAAAGCAAACATCACCTG...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGTCTCAAAAAGAGGCTTaGGGGAGAGGCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLSQKEA*GRGHFC
Trigger: GCAGAAATGGCCTCTCCCCAAAGCCTCTTTTTGAGA...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CAA 90 bp AGAGAGAGTGGCACTCCTACCCTCCACTCTGGCCCCTTGGTACTGAATAGCCAGTCCACACCATTACTCTaGTTCACTCTTAAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: RESGTPTLHSGPLVLNSQSTPLL*FTLKSL
Trigger: AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA...CTGGCTATTCAGTACCAAGGGGCCAGAGTGGAGGGTAGGAGTGCCACTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS TCA 90 bp CCACCCTTTTCTGCTGATGTCTCTTCCAAGGCTATATCAGGGATCTaGTGGGGACAGAGGACAGTGGATAGGAAATCCGACCAAGATCAC +
Preference number: 5 (lower is better)
Translates to: PPFSADVSSKAISGI*WGQRTVDRKSDQDH
Trigger: GTGATCTTGGTCGGATTTCCTATCCACTGTCCTCTGTCCCCATCAGATCCCTGATATAGCCTTGGAAGAGACATCAGCAGAAAAGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CCA 90 bp ACCTGCACAGGCAGAGAACAGCTGAGGAGAAGTCAAGGGCAGGCATaGAAAATAGAGCTGACCTACAGACTTCCCACTTACTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: TCTGREQLRRSQGQA*KIELTYRLPTYFDF
Trigger: GAAGTCAAAGTAAGTGGGAAGTCTGTAGGTCAGCTCTATTTTCCATGCCTGCCCTTGACTTCTCCTCAGCTGTTCTCTGCCTGTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CCA 90 bp CTGTCCTCTGATACCACCCCCAACCCTTGTCCCTGTGAAGCTGAATaGGAACAAAGAAAAGATCCTCAAATCAGTCAGGAGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LSSDTTPNPCPCEAE*EQRKDPQISQEIWA
Trigger: TGCCCAGATCTCCTGACTGATTTGAGGATCTTTTCTTTGTTCCCATTCAGCTTCACAGGGACAAGGGTTGGGGGTGGTATCAGAGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497354.1
CDS-3UTR CAA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGTCTGTGCTGCTCCCTTaGCTGGACATCTTGAATGAT +
Preference number: 5 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLSVLLP*LDILND
Trigger: ATCATTCAAGATGTCCAGCAAAGGGAGCAGCACAGA...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTTAAAGTGCAGGGTATaGACACAACCAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCLKCRV*TQPVWP
Trigger: GGGCCATACTGGTTGTGTCAATACCCTGCACTTTAA...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACGGTTCCAGTGCCAACTaGTGGGACGCTCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHGSSAN*WDAPLC
Trigger: GCACAAGGGAGCGTCCCACAAGTTGGCACTGGAACC...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGAAAGGGTTGCCCATCAAACAGGTCAGTTaGGTGCAAGCTATCTTCATC +
Preference number: 5 (lower is better)
Translates to: SPKCVSAECRAWDRKGLPIKQVS*VQAIFI
Trigger: GATGAAGATAGCTTGCACCAAACTGACCTGTTTGAT...GGGCAACCCTTTCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CAA 90 bp GAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: EPHSRAQLPFLGTLCWFTPRYSL*VHSSGL
Trigger: CAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGG...AGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS TCA 90 bp GCCCAAGCTTACTGCTGGCTTCGTAAGAAGACAATGAAATCCAGATaGCCTCATTCACTCCAGATTCCAAAGCTCCAACTTGCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: AQAYCWLRKKTMKSR*PHSLQIPKLQLAQG
Trigger: GCCTTGGGCAAGTTGGAGCTTTGGAATCTGGAGTGAATGAGGTCATCTGGATTTCATTGTCTTCTTACGAAGCCAGCAGTAAGCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CCA 90 bp TGGGTTAATCATCAAACCCTGGCATTGGCTGAGCTAAAAGCAAACTaGCCTGCAGAATGCTTTTGGAGAATGGACAAATGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: WVNHQTLALAELKAN*PAECFWRMDKCWPG
Trigger: CCCAGGCCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTTAGCTCAGCCAATGCCAGGGTTTGATGATTAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466253.1
ENST00000490368.5
CDS CCA 90 bp AAGCAGCTTCTTGGGGCTCCCAAAGCCTCAATCTCAGCCACCCTCTaGGTAAATTCACTGAACAAGGCAAAAGAAATAAACTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KQLLGAPKASISATL*VNSLNKAKEINSSR
Trigger: CCTGCTGGAGTTTATTTCTTTTGCCTTGTTCAGTGAATTTACCCAGAGGGTGGCTGAGATTGAGGCTTTGGGAGCCCCAAGAAGCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS-3UTR CAA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCTCACGGTTAGCCCGCTaGCGCTGTACACGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: LLSFYCYLILITLCVISPSRLAR*RCTRRR
Trigger: TCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGA...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CAA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGATTCCTAGGTACTCTTaGTTGGTTCACTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLIPRYS*LVHSSG
Trigger: ACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CAA 90 bp CTAAAGCAAAAAGTCCAAAGTGCGTTTCTGCTGAATGTAGGGCCTGGGACAGGATCTCAAAAAGAGGCTTaGGGGAGAGGCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LKQKVQSAFLLNVGPGTGSQKEA*GRGHFC
Trigger: GCAGAAATGGCCTCTCCCCAAAGCCTCTTTTTGAGA...TCCTGTCCCAGGCCCTACATTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGATTCTTGGTTGGATCTaGTGGAACTGGGGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLILGWI*WNWGQK
Trigger: TTTTTGCCCCCAGTTCCACAAGATCCAACCAAGAAT...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATAAGCTGCATGCACCCTACCTATGAGGCTTCCAACAGTCCACATGCTCAAGGATTGAACTCAGGCAGTTaGGTTCAAGAGCCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: ISCMHPTYEASNSPHAQGLNSGS*VQEPVL
Trigger: AAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAA...TCCTTGAGCATGTGGACTGTTGGAAGCCTCATAGGTAGGGTGCATGCAGCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS TCA 90 bp AGGCTGCTCTTCTTCCTCCTCTTCTTCCTCCTCTTCCTCTTCCTCTaGGCGGTCATGGACTCGATTTTCATCATTAATGGAGTAATGACC +
Preference number: 5 (lower is better)
Translates to: RLLFFLLFFLLFLFL*AVMDSIFIINGVMT
Trigger: GGTCATTACTCCATTAATGATGAAAATCGAGTCCATGACCGCTCAGAGGAAGAGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS TCA 90 bp GTGAGTGGACTGCCCAAGCTTACTGCTGGCTTCGTAAGAAGACAATaGAATCCAGATGACCTCATTCACTCCAGATTCCAAAGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: VSGLPKLTAGFVRRQ*NPDDLIHSRFQSSN
Trigger: GTTGGAGCTTTGGAATCTGGAGTGAATGAGGTCATCTGGATTTCATTGTCTTCTTACGAAGCCAGCAGTAAGCTTGGGCAGTCCACTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS GCA 90 bp CTATCAGCTCCCAATCCATGCTGCAGTTCAGATTTCTCTAACTCATaGCTGATTCTCTCAGTTGCTATTATGCTCCCTTGCCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: LSAPNPCCSSDFSNS*LILSVAIMLPCLTW
Trigger: CCAGGTGAGGCAAGGGAGCATAATAGCAACTGAGAGAATCAGGCATGAGTTAGAGAAATCTGAACTGCAGCATGGATTGGGAGCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS CCA 90 bp TCACTACTCTGGAACTTTTTAGCCCTCTTAAAAGGGTCACTCCCTTaGGAATTCATTTCCAACCCTAGCTTACCCGGTGATGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: SLLWNFLALLKGSLP*EFISNPSLPGDGVS
Trigger: AGAGACGCCATCACCGGGTAAGCTAGGGTTGGAAATGAATTCCCAAGGGAGTGACCCTTTTAAGAGGGCTAAAAAGTTCCAGAGTAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS-3UTR CAA 90 bp CTCTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTCTGTTAGGAAGAAACTaGGCCTGGAACACATTACTT +
Preference number: 5 (lower is better)
Translates to: LSIEPHSRAQLPFLGTLCLLGRN*AWNTLL
Trigger: AAGTAATGTGTTCCAGGCCAAGTTTCTTCCTAACAG...ACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTCAGGTGATGTTTGCTTaGGACTCACTGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVQVMFA*DSLFTR
Trigger: CCTGGTGAACAGTGAGTCCAAAGCAAACATCACCTG...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LVTIHRGKLTPGVTSTPLPRYSL*VHSSGL
Trigger: CAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGG...TAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCTCTCAAAAAGAGGCTTaGGGGAGAGGCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSSQKEA*GRGHFC
Trigger: GCAGAAATGGCCTCTCCCCAAAGCCTCTTTTTGAGA...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACCTCCACTCTGGCCCCTaGGTACTGAATAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHLHSGP*VLNSQL
Trigger: CAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAG...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTCCATAGAGCCCCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGTCCACACCATTACTCTaGTTCACTCTTAAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LHRAPFQGSTPIPRYSLLSTPLL*FTLKSL
Trigger: AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA...CAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCTATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAGGAACTGGCATGAAGTaGGATGGCTTAATGATCAAG +
Preference number: 5 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPGTGMK*DGLMIK
Trigger: CTTGATCATTAAGCCATCCAACTTCATGCCAGTTCC...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS TCA 90 bp GATGGGGACAGAGGACAGTGGATAGGAAATCCGACCAAGATCACCTaGTTACTGCTTGAAGTCACTACTCTGGAACTTTTTAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: DGDRGQWIGNPTKIT*LLLEVTTLELFSPL
Trigger: AAGAGGGCTAAAAAGTTCCAGAGTAGTGACTTCAAGCAGTAATCAGGTGATCTTGGTCGGATTTCCTATCCACTGTCCTCTGTCCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS-3UTR CAA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGAGCCCGCTTCCCGTCTaGGGTCATCCTTCTGCTAGC +
Preference number: 5 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLSPLPV*GHPSAS
Trigger: GCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCT...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326837.6
ENST00000368073.7
CDS-3UTR CAA 90 bp GATTTGAACTCAGGCAGTTTGGTTCAAGAGCCTGTGCTTATACTACACTGCCTCTTAAAGTGCAGGGTATaGACACAACCAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: DLNSGSLVQEPVLILHCLLKCRV*TQPVWP
Trigger: GGGCCATACTGGTTGTGTCAATACCCTGCACTTTAA...GAGGCAGTGTAGTATAAGCACAGGCTCTTGAACCAAACTGCCTGAGTTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CAA 90 bp CCATTCCAGGGCTCAACTCCCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTCTGTTAGGAAGAAACTaGGCCTGGAACACATTACTT +
Preference number: 5 (lower is better)
Translates to: PFQGSTPIPRYSLLVHSSLLGRN*AWNTLL
Trigger: AAGTAATGTGTTCCAGGCCAAGTTTCTTCCTAACAG...AGAGGAGTGAACCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCAATCAAACAGGTCAGTTaGGTGCAAGCTATCTTCATC +
Preference number: 5 (lower is better)
Translates to: SLVTIHRGKLTPGVTSTPIKQVS*VQAIFI
Trigger: GATGAAGATAGCTTGCACCAAACTGACCTGTTTGAT...TGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGATCAAACAGGTCAGTTaGGTGCAAGCTATCTTCATC +
Preference number: 5 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGIKQVS*VQAIFI
Trigger: GATGAAGATAGCTTGCACCAAACTGACCTGTTTGAT...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CAA 90 bp AACCCCATTCCCTATCCCAAACCAGTTAACAAAATAGGCTTCCCTCTCCTCTCACCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: NPIPYPKPVNKIGFPLLSPRYSL*VHSSGL
Trigger: CAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGG...TGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000473382.2
CDS-3UTR CAA 90 bp AAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCATAGGGACAGGGAGATaGCTGCCACCAAACAATGTT +
Preference number: 5 (lower is better)
Translates to: KLTPGVTSTPLLLFTLKSIGTGR*LPPNNV
Trigger: AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTAT...GGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR CAA 90 bp ATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACAATGTTATAGGGACAGGGAGATaGCTGCCACCAAACAATGTT +
Preference number: 5 (lower is better)
Translates to: IRPLTVIGTGRLLPPNNVIGTGR*LPPNNV
Trigger: AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTAT...AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR CAA 90 bp CCATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGTCCACACCATTACTCTaGTTCACTCTTAAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: PFLGTLCWFTPLVCPSPGSTPLL*FTLKSL
Trigger: AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA...CCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCAGGTGGAACTGGCATGAAGTaGGATGGCTTAATGATCAAG +
Preference number: 5 (lower is better)
Translates to: KGKSQSLVTIHRGKLTPGGTGMK*DGLMIK
Trigger: CTTGATCATTAAGCCATCCAACTTCATGCCAGTTCC...ACCTGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTATCAAACAGGTCAGTTaGGTGCAAGCTATCTTCATC +
Preference number: 5 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLIKQVS*VQAIFI
Trigger: GATGAAGATAGCTTGCACCAAACTGACCTGTTTGAT...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCCCTAGGTACTCTTTGTaGGTTCACTCCTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTPRYSL*VHSSGL
Trigger: CAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGG...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCATAGGGACAGGGAGATaGCTGCCACCAAACAATGTT +
Preference number: 5 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTIGTGR*LPPNNV
Trigger: AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTAT...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR CAA 90 bp CACAGAGGTAAACTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTTCCACACCATTACTCTaGTTCACTCTTAAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: HRGKLTPGVTSTPLLLFTSTPLL*FTLKSL
Trigger: AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA...AGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAGTTTACCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR CAA 90 bp AACCTAAAGGGTAAGTCCCAATCTCTAGTGACCATACACAGAGGTAAACTGACCTTAGAAGAGCCATCCTaGGAACCCCCTACAAGACTT +
Preference number: 5 (lower is better)
Translates to: NLKGKSQSLVTIHRGKLTLEEPS*EPPTRL
Trigger: AAGTCTTGTAGGGGGTTCCAAGGATGGCTCTTCTAA...GGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATTCCTAGGTACTCTTTGTTGGTTCACTCCTCTGGTTTGTCCTTCTCCTGGGATGGAACTGGCATGAAGTaGGATGGCTTAATGATCAAG +
Preference number: 5 (lower is better)
Translates to: IPRYSLLVHSSGLSFSWDGTGMK*DGLMIK
Trigger: CTTGATCATTAAGCCATCCAACTTCATGCCAGTTCC...ATCCCAGGAGAAGGACAAACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTGACCCCAGGTGTCACTTCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTCAGGATACAGAATTCTaGGTTGGATCTTGTGGAACT +
Preference number: 5 (lower is better)
Translates to: LTPGVTSTPLLLFTLKSLQDTEF*VGSCGT
Trigger: AGTTCCACAAGATCCAACCAAGAATTCTGTATCCTG...AAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACCTGGGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTGCCTGCAGAATGCTTTaGGAGAATGGACAAATGCTG +
Preference number: 5 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQAACRML*ENGQML
Trigger: CAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGC...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS-3UTR CAA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTCATCAAACCCTGGCATaGGCTGAGCTAAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQAHQTLA*AELKAN
Trigger: GTTTGCTTTTAGCTCAGCCAATGCCAGGGTTTGATG...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS CCA 90 bp GAAATCCGACCAAGATCACCTGATTACTGCTTGAAGTCACTACTCTaGAACTTTTTAGCCCTCTTAAAAGGGTCACTCCCTTGGGAATTC +
Preference number: 5 (lower is better)
Translates to: EIRPRSPDYCLKSLL*NFLALLKGSLPWEF
Trigger: GAATTCCCAAGGGAGTGACCCTTTTAAGAGGGCTAAAAAGTTCCAGAGTAGTGACTTCAAGCAGTAATCAGGTGATCTTGGTCGGATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS-3UTR CAA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACTTAAAGTGCAGGGTATaGACACAACCAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHLKCRV*TQPVWP
Trigger: GGGCCATACTGGTTGTGTCAATACCCTGCACTTTAA...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAACTGTTAGGAAGAAACTaGGCCTGGAACACATTACTT +
Preference number: 5 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQLLGRN*AWNTLL
Trigger: AAGTAATGTGTTCCAGGCCAAGTTTCTTCCTAACAG...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAACACGTTTTGTATTCTaGCAACACTGTGTGGCAGAC +
Preference number: 5 (lower is better)
Translates to: RYKIRPLTVIGTGRLLPPTRFVF*QHCVAD
Trigger: GTCTGCCACACAGTGTTGCAAGAATACAAAACGTGT...TGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGCAGGTGATGTTTGCTTaGGACTCACTGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKQVMFA*DSLFTR
Trigger: CCTGGTGAACAGTGAGTCCAAAGCAAACATCACCTG...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AAGAGGTGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATTCCTAGGTACTCTTaGTTGGTTCACTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: KRWTRFKSNPGSLSLHSSIPRYS*LVHSSG
Trigger: ACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT...AGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCTCCACTCTGGCCCCTaGGTACTGAATAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLLHSGP*VLNSQL
Trigger: CAACTGGCTATTCAGTACCAAGGGGCCAGAGTGGAG...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAATACAGAATTCTTGGTaGGATCTTGTGGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: RYKIRPLTVIGTGRLLPPIQNSW*DLVELG
Trigger: CCCCAGTTCCACAAGATCCAACCAAGAATTCTGTAT...TGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp AGAATTCAGCTGGGACTTTCAGACTCAGTGACCAGTGATAAGACAAGTGCCCAACAGGATACAGAATTCTaGGTTGGATCTTGTGGAACT +
Preference number: 5 (lower is better)
Translates to: RIQLGLSDSVTSDKTSAQQDTEF*VGSCGT
Trigger: AGTTCCACAAGATCCAACCAAGAATTCTGTATCCTG...TTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAAGTCCCAGCTGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS CCA 90 bp AATACGATGATGACCTCAACTTACCCCCTTTTCTTACATGACAGCTaGAAACTTAGCTTTCCTACTCTTGTACAGCTGGCTAAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: NTMMTSTYPLFLHDS*KLSFPTLVQLAKPN
Trigger: ATTGGGCTTAGCCAGCTGTACAAGAGTAGGAAAGCTAAGTTTCCAGCTGTCATGTAAGAAAAGGGGGTAAGTTGAGGTCATCATCGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466253.1
CDS-3UTR CAA 90 bp ATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGGTGCAAGCTATCAAACAGGTCAGTTaGGTGCAAGCTATCTTCATC +
Preference number: 5 (lower is better)
Translates to: MHKEPQHVTIKQVSLVQAIKQVS*VQAIFI
Trigger: GATGAAGATAGCTTGCACCAAACTGACCTGTTTGAT...AGCTTGCACCAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CAA 90 bp TCTCAGGTGATGCATAAGGAACCACAGCATGTGACTATCAAACAGGTCAGTTTGATCAAACAGGTCAGTTaGGTGCAAGCTATCTTCATC +
Preference number: 5 (lower is better)
Translates to: SQVMHKEPQHVTIKQVSLIKQVS*VQAIFI
Trigger: GATGAAGATAGCTTGCACCAAACTGACCTGTTTGAT...CAAACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCATCACCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461888.5
ENST00000490368.5
CDS-3UTR CAA 90 bp TGTGTATGTATGTGTGTGGTGTGTGTGTACATGTCTTCTGTCACAAAGTACCACATTCTTGGTTGGATCTaGTGGAACTGGGGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: CVCMCVVCVYMSSVTKYHILGWI*WNWGQK
Trigger: TTTTTGCCCCCAGTTCCACAAGATCCAACCAAGAAT...GTGGTACTTTGTGACAGAAGACATGTACACACACACCACACACATACATACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGCCACCAAACCAGGATACAGAATTCTaGGTTGGATCTTGTGGAACT +
Preference number: 5 (lower is better)
Translates to: YKIRPLTVIGTGRLLPPNQDTEF*VGSCGT
Trigger: AGTTCCACAAGATCCAACCAAGAATTCTGTATCCTG...GTTTGGTGGCAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGATTCCTAGGTACTCTTaGTTGGTTCACTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKIPRYS*LVHSSG
Trigger: ACCAGAGGAGTGAACCAACAAAGAGTACCTAGGAAT...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATCTCAAAAAGAGGCTTaGGGGAGAGGCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: STPLLLFTLKSLYCIQRISQKEA*GRGHFC
Trigger: GCAGAAATGGCCTCTCCCCAAAGCCTCTTTTTGAGA...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp TGGACAAGGTTTAAGTCAAACCCAGGAAGTCTTTCCCTTCACTCTTCTATAAAGATACAGAATTCTTGGTaGGATCTTGTGGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: WTRFKSNPGSLSLHSSIKIQNSW*DLVELG
Trigger: CCCCAGTTCCACAAGATCCAACCAAGAATTCTGTAT...CTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp ATTTATAGATATAAAATTAGGCCTCTAACAGTGATAGGGACAGGGAGATTGCTGTTAAAGTGCAGGGTATaGACACAACCAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: IYRYKIRPLTVIGTGRLLLKCRV*TQPVWP
Trigger: GGGCCATACTGGTTGTGTCAATACCCTGCACTTTAA...CAGCAATCTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCTTAAAGTGCAGGGTATaGACACAACCAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: LLSFYCYLILITLCVISPLKCRV*TQPVWP
Trigger: GGGCCATACTGGTTGTGTCAATACCCTGCACTTTAA...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS-3UTR CAA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATATAGGGACAGGGAGATaGCTGCCACCAAACAATGTT +
Preference number: 5 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYIGTGR*LPPNNV
Trigger: AACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTAT...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000477163.1
CDS-3UTR CAA 90 bp TCCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATAACACGTTTTGTATTCTaGCAACACTGTGTGGCAGAC +
Preference number: 5 (lower is better)
Translates to: STPLLLFTLKSLYCIQRITRFVF*QHCVAD
Trigger: GTCTGCCACACAGTGTTGCAAGAATACAAAACGTGT...TATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATATTCTTGGTTGGATCTaGTGGAACTGGGGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYILGWI*WNWGQK
Trigger: TTTTTGCCCCCAGTTCCACAAGATCCAACCAAGAAT...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CCACACCATTACTCTTGTTCACTCTTAAGTCCCTTTATTGCATTCAGAGAATATATACAGAATTCTTGGTaGGATCTTGTGGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: PHHYSCSLLSPFIAFREYIQNSW*DLVELG
Trigger: CCCCAGTTCCACAAGATCCAACCAAGAATTCTGTAT...ATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
CDS-3UTR CAA 90 bp CTGCTTAGCTTCTATTGTTACTTAATCCTCATAACCCTATGTGTTATTAGTCCCTCAAGGAATCTAGGGTaGCCAAGAGTCTTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LLSFYCYLILITLCVISPSRNLG*PRVFQC
Trigger: ACACTGAAAGACTCTTGGCAACCCTAGATTCCTTGA...GGGACTAATAACACATAGGGTTATGAGGATTAAGTAACAATAGAAGCTAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475733.5
ENST00000610139.5
CDS GCA 72 bp GCGGCCGCCACCACCACCGCCTCCGCTCTCTGCGCTTaGGCCTGCGCTGCCACGCTTTCCGGCCCCGTTTGC +
Preference number: 6 (lower is better)
Translates to: AAATTTASALCA*ACAATLSGPVC
Trigger: GCAAACGGGGCCGGAAAGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGAGGCGGTGGTGGTGGCGGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368074.6
ENST00000440682.5
ENST00000461888.5
CDS CAA 72 bp AGCGGCCGCCACCACCACCGCCTCCGCTCTCTGCGCTaGCGCCTGCGCTGCCACGCTTTCCGGCCCCGTTTG +
Preference number: 6 (lower is better)
Translates to: SGRHHHRLRSLR*RLRCHAFRPRL
Trigger: CAAACGGGGCCGGAAAGCGTGGCAGCGCAGGCGCAAGCGCAGAGAGCGGAGGCGGTGGTGGTGGCGGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368074.6
ENST00000440682.5
ENST00000461888.5
CDS GCA 72 bp TGCTCCGACTGTTCCAGGCCCAGCCGCCCCGTCCACTaGCACCACCAACGCCGCCGCCATCTTACACTGGCC +
Preference number: 6 (lower is better)
Translates to: CSDCSRPSRPVH*HHQRRRHLTLA
Trigger: GGCCAGTGTAAGATGGCGGCGGCGTTGGTGGTGGCAGTGGACGGGGCGGCTGGGCCTGGAACAGTCGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326837.6
CDS GCA 72 bp CCGCTTCCCGTCTTGGGTCATCCTTCTGCTAGCGGCTaGTCCGACTGTTCCAGGCCCAGCCGCCCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: PLPVLGHPSASG*SDCSRPSRPVH
Trigger: GTGGACGGGGCGGCTGGGCCTGGAACAGTCGGAGCAGCCGCTAGCAGAAGGATGACCCAAGACGGGAAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000407642.6
ENST00000475733.5
ENST00000610139.5
CDS CAA 72 bp CGGGAATCGGCGAGGCTCAGCAGCCCGCTTCCCGTCTaGGGTCATCCTTCTGCTAGCGGCTGCTCCGACTGT +
Preference number: 6 (lower is better)
Translates to: RESARLSSPLPV*GHPSASGCSDC
Trigger: ACAGTCGGAGCAGCCGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCTGCTGAGCCTCGCCGATTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000407642.6
ENST00000419626.1
ENST00000475733.5
ENST00000610139.5
CDS CCA 72 bp GGGAATCGGCGAGGCTCAGCAGCCCGCTTCCCGTCTTaGGTCATCCTTCTGCTAGCGGCTGCTCCGACTGTT +
Preference number: 6 (lower is better)
Translates to: GNRRGSAARFPS*VILLLAAAPTV
Trigger: AACAGTCGGAGCAGCCGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCTGCTGAGCCTCGCCGATTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000407642.6
ENST00000419626.1
ENST00000475733.5
ENST00000610139.5
CDS CAA 90 bp TTACAAGCACGGGAATCGGCGAGGCTCAGCAGCCCGCTTCCCGTCTaGGGTCATCCTTCTGCTAGCGGCTGCTCCGACTGTTCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: LQARESARLSSPLPV*GHPSASGCSDCSRP
Trigger: GGGCCTGGAACAGTCGGAGCAGCCGCTAGCAGAAGGATGACCCAAGACGGGAAGCGGGCTGCTGAGCCTCGCCGATTCCCGTGCTTGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000407642.6
ENST00000419626.1
ENST00000475733.5
ENST00000610139.5
CDS CCA 72 bp CAGTCCTCTAGGGCCCGCTCATCATCTGATGAGTCCTaGTCACGGTTAGCCCGCTTGCGCTGTACACGGCGC +
Preference number: 6 (lower is better)
Translates to: QSSRARSSSDES*SRLARLRCTRR
Trigger: GCGCCGTGTACAGCGCAAGCGGGCTAACCGTGACCAGGACTCATCAGATGATGAGCGGGCCCTAGAGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS CAA 90 bp AGGGCCCGCTCATCATCTGATGAGTCCTGGTCACGGTTAGCCCGCTaGCGCTGTACACGGCGCCGAGGCTGCTCTTCTTCCTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: RARSSSDESWSRLAR*RCTRRRGCSSSSSS
Trigger: AGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGACCAGGACTCATCAGATGATGAGCGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS GCA 72 bp CGGTTAGCCCGCTTGCGCTGTACACGGCGCCGAGGCTaGTCTTCTTCCTCCTCTTCTTCCTCCTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RLARLRCTRRRG*SSSSSSSSSSS
Trigger: AGAGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGCAGCCTCGGCGCCGTGTACAGCGCAAGCGGGCTAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS TCA 72 bp CCAGCGATGACTTCGGGTCGGCGGAAGGAAAAGACCTaGGCGCTAAGAGCTTGGGATACGGGTCAGGCCCAT +
Preference number: 6 (lower is better)
Translates to: PAMTSGRRKEKT*ALRAWDTGQAH
Trigger: ATGGGCCTGACCCGTATCCCAAGCTCTTAGCGCTCAGGTCTTTTCCTTCCGCCGACCCGAAGTCATCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368073.7
ENST00000419626.1
ENST00000610139.5
CDS CCA 72 bp CTGAGCTCTCTGTGTCTGTGCCTCGACTTTCTGTGCTaGTGCGGTTGGGGCCACCATCATCCCCAGTCAAGC +
Preference number: 6 (lower is better)
Translates to: LSSLCLCLDFLC*CGWGHHHPQSS
Trigger: GCTTGACTGGGGATGATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGAGGCACAGACACAGAGAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000407642.6
ENST00000440682.5
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS CAA 72 bp TCATCATCTGATGAGTCCTGGTCACGGTTAGCCCGCTaGCGCTGTACACGGCGCCGAGGCTGCTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SSSDESWSRLAR*RCTRRRGCSSS
Trigger: GGAAGAAGAGCAGCCTCGGCGCCGTGTACAGCGCAAGCGGGCTAACCGTGACCAGGACTCATCAGATGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS CAA 72 bp GGGTCGGCGGAAGGAAAAGACCTGAGCGCTAAGAGCTaGGGATACGGGTCAGGCCCATCCTTAGGGGAAACC +
Preference number: 6 (lower is better)
Translates to: GSAEGKDLSAKS*GYGSGPSLGET
Trigger: GGTTTCCCCTAAGGATGGGCCTGACCCGTATCCCAAGCTCTTAGCGCTCAGGTCTTTTCCTTCCGCCGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368073.7
ENST00000419626.1
ENST00000610139.5
CDS CAA 90 bp GATGACTTCGGGTCGGCGGAAGGAAAAGACCTGAGCGCTAAGAGCTaGGGATACGGGTCAGGCCCATCCTTAGGGGAAACCGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: DDFGSAEGKDLSAKS*GYGSGPSLGETGWE
Trigger: TTCCCAGCCGGTTTCCCCTAAGGATGGGCCTGACCCGTATCCCAAGCTCTTAGCGCTCAGGTCTTTTCCTTCCGCCGACCCGAAGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368073.7
ENST00000419626.1
ENST00000610139.5
CDS GCA 72 bp AGTTCTCTCTGGACCAACCACCTCCGCTGCCTCACCTaGACAGGCAGAGAACAGCTGAGGAGAAGTCAAGGG +
Preference number: 6 (lower is better)
Translates to: SSLWTNHLRCLT*TGREQLRRSQG
Trigger: CCCTTGACTTCTCCTCAGCTGTTCTCTGCCTGTGCAGGTGAGGCAGCGGAGGTGGTTGGTCCAGAGAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS GCA 72 bp ACTTCTTTTAGTTCTCTCTGGACCAACCACCTCCGCTaGCTCACCTGCACAGGCAGAGAACAGCTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: TSFSSLWTNHLR*LTCTGREQLRR
Trigger: TCTCCTCAGCTGTTCTCTGCCTGTGCAGGTGAGGCAGCGGAGGTGGTTGGTCCAGAGAGAACTAAAAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS GCA 72 bp GAACCTTGCACATCCCAGGGGGAACATCCTACTACTTaGCCTGAGCACAACAGGCTCAGCTATAAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: EPCTSQGEHPTT*PEHNRLSYKAA
Trigger: TGCTGCCTTATAGCTGAGCCTGTTGTGCTCAGGGCAAGTAGTAGGATGTTCCCCCTGGGATGTGCAAGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CCA 72 bp GCTGAGCTAAAAGCAAACTGGCCTGCAGAATGCTTTTaGAGAATGGACAAATGCTGGCCTGGGAGAGGGCAT +
Preference number: 6 (lower is better)
Translates to: AELKANWPAECF*RMDKCWPGRGH
Trigger: ATGCCCTCTCCCAGGCCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTTAGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466253.1
ENST00000490368.5
CDS CCA 72 bp GGCAGAGAACAGCTGAGGAGAAGTCAAGGGCAGGCATaGAAAATAGAGCTGACCTACAGACTTCCCACTTAC +
Preference number: 6 (lower is better)
Translates to: GREQLRRSQGQA*KIELTYRLPTY
Trigger: GTAAGTGGGAAGTCTGTAGGTCAGCTCTATTTTCCATGCCTGCCCTTGACTTCTCCTCAGCTGTTCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS GCA 72 bp GCATTGGCTGAGCTAAAAGCAAACTGGCCTGCAGAATaGTTTTGGAGAATGGACAAATGCTGGCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: ALAELKANWPAE*FWRMDKCWPGR
Trigger: TCTCCCAGGCCAGCATTTGTCCATTCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTTAGCTCAGCCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466253.1
ENST00000490368.5
CDS CAA 90 bp CACCAGACCTGTCTGGGCAAATGGGTTAATCATCAAACCCTGGCATaGGCTGAGCTAAAAGCAAACTGGCCTGCAGAATGCTTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: HQTCLGKWVNHQTLA*AELKANWPAECFWR
Trigger: TCTCCAAAAGCATTCTGCAGGCCAGTTTGCTTTTAGCTCAGCCAATGCCAGGGTTTGATGATTAACCCATTTGCCCAGACAGGTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS CAA 72 bp TGTCTGGGCAAATGGGTTAATCATCAAACCCTGGCATaGGCTGAGCTAAAAGCAAACTGGCCTGCAGAATGC +
Preference number: 6 (lower is better)
Translates to: CLGKWVNHQTLA*AELKANWPAEC
Trigger: GCATTCTGCAGGCCAGTTTGCTTTTAGCTCAGCCAATGCCAGGGTTTGATGATTAACCCATTTGCCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490368.5
CDS TCA 72 bp TTCTTCCTCCTCTTCTTCCTCCTCTTCCTCTTCCTCTaGGCGGTCATGGACTCGATTTTCATCATTAATGGA +
Preference number: 6 (lower is better)
Translates to: FFLLFFLLFLFL*AVMDSIFIING
Trigger: TCCATTAATGATGAAAATCGAGTCCATGACCGCTCAGAGGAAGAGGAAGAGGAGGAAGAAGAGGAGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326837.6
ENST00000368073.7
ENST00000368074.6
ENST00000447377.5
ENST00000461888.5
ENST00000475733.5
ENST00000495887.1
ENST00000610139.5
CDS TCA 72 bp CTGCCCAAGCTTACTGCTGGCTTCGTAAGAAGACAATaGAATCCAGATGACCTCATTCACTCCAGATTCCAA +
Preference number: 6 (lower is better)
Translates to: LPKLTAGFVRRQ*NPDDLIHSRFQ
Trigger: TTGGAATCTGGAGTGAATGAGGTCATCTGGATTTCATTGTCTTCTTACGAAGCCAGCAGTAAGCTTGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476033.5
ENST00000481831.1
CDS GCA 72 bp GTGAAAAGAGGAACACATAGGAAAGGCACCCTGCCTTaGAGCTGGACCTATAGTCCAAGAAAACAACTTCTT +
Preference number: 6 (lower is better)
Translates to: VKRGTHRKGTLP*SWTYSPRKQLL
Trigger: AAGAAGTTGTTTTCTTGGACTATAGGTCCAGCTGCAAGGCAGGGTGCCTTTCCTATGTGTTCCTCTTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CCA 72 bp TGGAACTTTTTAGCCCTCTTAAAAGGGTCACTCCCTTaGGAATTCATTTCCAACCCTAGCTTACCCGGTGAT +
Preference number: 6 (lower is better)
Translates to: WNFLALLKGSLP*EFISNPSLPGD
Trigger: ATCACCGGGTAAGCTAGGGTTGGAAATGAATTCCCAAGGGAGTGACCCTTTTAAGAGGGCTAAAAAGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CAA 72 bp AAATCCCGGAGAGAATGTGATAGCGCTAGTGCCGGTTaGTTTACAGAGACTCCAGTAACAATCATGAGTCAG +
Preference number: 6 (lower is better)
Translates to: KSRRECDSASAG*FTETPVTIMSQ
Trigger: CTGACTCATGATTGTTACTGGAGTCTCTGTAAACAAACCGGCACTAGCGCTATCACATTCTCTCCGGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495887.1
CDS CCA 72 bp ATGACCTCAACTTACCCCCTTTTCTTACATGACAGCTaGAAACTTAGCTTTCCTACTCTTGTACAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: MTSTYPLFLHDS*KLSFPTLVQLA
Trigger: AGCCAGCTGTACAAGAGTAGGAAAGCTAAGTTTCCAGCTGTCATGTAAGAAAAGGGGGTAAGTTGAGGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466253.1
CDS CCA 72 bp AGAGGAACACATAGGAAAGGCACCCTGCCTTGCAGCTaGACCTATAGTCCAAGAAAACAACTTCTTTTAGTT +
Preference number: 6 (lower is better)
Translates to: RGTHRKGTLPCS*TYSPRKQLLLV
Trigger: AACTAAAAGAAGTTGTTTTCTTGGACTATAGGTCCAGCTGCAAGGCAGGGTGCCTTTCCTATGTGTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS CCA 72 bp CGTGAAGGCCGCCACAGACAATACACAGAATGGGTATaGCTGCAAGCCAATGAAACTTTATTTACAAAAACC +
Preference number: 6 (lower is better)
Translates to: REGRHRQYTEWV*LQANETLFTKT
Trigger: GGTTTTTGTAAATAAAGTTTCATTGGCTTGCAGCCATACCCATTCTGTGTATTGTCTGTGGCGGCCTTCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS TCA 72 bp ATGGTCTTTATTGCAACTATTCAACTCATTGTAGCGTaGAGGCCGCCACAGACAATACACAGAATGGGTATG +
Preference number: 6 (lower is better)
Translates to: MVFIATIQLIVA*RPPQTIHRMGM
Trigger: CATACCCATTCTGTGTATTGTCTGTGGCGGCCTTCACGCTACAATGAGTTGAATAGTTGCAATAAAGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481831.1
CDS GCA 72 bp AAGGCCGCCACAGACAATACACAGAATGGGTATGGCTaGAAGCCAATGAAACTTTATTTACAAAAACCAGCA +
Preference number: 6 (lower is better)
Translates to: KAATDNTQNGYG*KPMKLYLQKPA
Trigger: TGCTGGTTTTTGTAAATAAAGTTTCATTGGCTTGCAGCCATACCCATTCTGTGTATTGTCTGTGGCGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481831.1