Pregenerated sensors for DCAF4L2 (Homo sapiens)
Ensembl gene IDs: ENSG00000176566Ensembl transcript IDs: ENST00000319675.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TATTTGCAAGTGAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTCCCCTAGCAGCCGGATaGATGGGATCTACAAACACC | + |
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Preference number: 2 (lower is better) Translates to: YLQVRVNRFASYVVITFSPLAAG*MGSTNT Trigger: GGTGTTTGTAGATCCCATCCATCCGGCTGCTAGGGG...AGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTCACTTGCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAATGCAATCATTTCTGCTCTTCAAGTACAGATaGTGCATGTATTTCCGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QQILLILPSNDLPMQSFLLFKYR*CMYFRN Trigger: GTTCCGGAAATACATGCATCATCTGTACTTGAAGAG...CAGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGATCATTTCCAGGCTTTaGCTATTAAGAAGTAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLIISRL*LLRSSH Trigger: GTGGCTACTTCTTAATAGCCAAAGCCTGGAAATGAT...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTGCAAGTGAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTAGTCAAACAGTCTCATaGTTCTCTAAAAGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YLQVRVNRFASYVVITFSSQTVS*FSKRLL Trigger: CAGAAGCCTTTTAGAGAAGCATGAGACTGTTTGACT...AGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTCACTTGCAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| 3UTR-3UTR TCA 90 bp | TATTTGCAAGTGAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTCAGCCCAGTTTAACTaGAACAACTTTACAGAACTA | + |
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Preference number: 2 (lower is better) Translates to: YLQVRVNRFASYVVITFSSAQFN*NNFTEL Trigger: TAGTTCTGTAAAGTTGTTTCAGTTAAACTGGGCTGA...AGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTCACTTGCAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGACATCACCTCTAATCTACAGAATGGACATTTTAATAGTTGCCTAAAACTCGTCTTTTCTAGCTTATaGTTGGTAGAAAAACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PDITSNLQNGHFNSCLKLVFSSL*LVEKQA Trigger: AGCCTGTTTTTCTACCAACAATAAGCTAGAAAAGAC...GAGTTTTAGGCAACTATTAAAATGTCCATTCTGTAGATTAGAGGTGATGTCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGAGGGAGGGTATGGTTGTaGGCAGGTGGCCATGACGGA | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRGRVWL*AGGHDG Trigger: TCCGTCATGGCCACCTGCTCACAACCATACCCTCCC...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGACTCCGAGGCGGGGTATaGGGAGGGTATGGTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRLRGGV*GGYGCE Trigger: CTCACAACCATACCCTCCCCATACCCCGCCTCGGAG...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR GCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGAAGTGATACGCGTGGATaGTCAGGGACCAGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRSDTRG*SGTRHR Trigger: CCTGTGCCTGGTCCCTGAGCATCCACGCGTATCACT...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGACATGGGACAGGCAAATaGCCTTCCACCCGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRHGTGK*PSTRCL Trigger: AAGGCAGCGGGTGGAAGGCCATTTGCCTGTCCCATG...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCACTGGGAAGCTACCTATaGACAGCGACGCTGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LDYSHQQILLILPSNDLPLGSYL*TATLGA Trigger: TGCTCCCAGCGTCGCTGTTCATAGGTAGCTTCCCAG...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGATTCCACCCGCTGCCTTaGTTTCCACAGCGCAGATCA | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRFHPLP*FPQRRS Trigger: TGATCTGCGCTGTGGAAATCAAGGCAGCGGGTGGAA...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGGCAGTCGCGGTCTTTTaGTCTCCATTTCGTTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLAVAVF*SPFRSA Trigger: CGCCGAACGAAATGGAGAGCAAAAGACCGCGACTGC...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGACAGCACGGCACAGCTTaGAGTATCTGCAAGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRQHGTA*SICKSH Trigger: GTGGGACTTGCAGATACTCCAAGCTGTGCCGTGCTG...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCATATGAACAGCGACGCTaGGAGCAGCACGGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LDYSHQQILLILPSNDLPYEQRR*EQHGTA Trigger: AGCTGTGCCGTGCTGCTCCCAGCGTCGCTGTTCATA...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGCCCCTAGCAGCCGGATaGATGGGATCTACAAACACC | + |
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Preference number: 4 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLPLAAG*MGSTNT Trigger: GGTGTTTGTAGATCCCATCCATCCGGCTGCTAGGGG...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | CCTGACATCACCTCTAATCTACAGAATGGACATTTTAATAGTTGCCTAAAACTCCTCCGGGCTGCATCCTaGAGAATTAACCGTAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PDITSNLQNGHFNSCLKLLRAAS*RINRRR Trigger: TCTCCTACGGTTAATTCTTCAGGATGCAGCCCGGAG...GAGTTTTAGGCAACTATTAAAATGTCCATTCTGTAGATTAGAGGTGATGTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR GCA 90 bp | CAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAATGCAATCATTTCTGGGAAACTGCAAAGCATaGCAGGCCGACGCATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QQILLILPSNDLPMQSFLGNCKA*QADAFL Trigger: CAGGAATGCGTCGGCCTGGCATGCTTTGCAGTTTCC...CAGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | CAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAATGCAATCATTTCTGCGACTTGGTTCACTGTaGAGAGCTGGTCAGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QQILLILPSNDLPMQSFLRLGSL*RAGQCW Trigger: CCAACACTGACCAGCTCTTCACAGTGAACCAAGTCG...CAGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | TATTTGCAAGTGAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTCCTGTACTGAAAGAGTaGTACGCGTGGATGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: YLQVRVNRFASYVVITFSPVLKE*YAWMLR Trigger: CCTGAGCATCCACGCGTATCACTCTTTCAGTACAGG...AGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTCACTTGCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | CCTGACATCACCTCTAATCTACAGAATGGACATTTTAATAGTTGCCTAAAACTCGAGACAAGCCTGTACTaGAAGAGTGATACGCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PDITSNLQNGHFNSCLKLETSLY*KSDTRG Trigger: TCCACGCGTATCACTCTTTCAGTACAGGCTTGTCTC...GAGTTTTAGGCAACTATTAAAATGTCCATTCTGTAGATTAGAGGTGATGTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR GCA 90 bp | CAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAATGCAATCATTTCTGCTTTTTCTGCTTGTCTaGTTCCTCGAGCAGTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: QQILLILPSNDLPMQSFLLFLLV*FLEQSR Trigger: CCGCGACTGCTCGAGGAAGCAGACAAGCAGAAAAAG...CAGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAAGGCCGACGCATTCCTaGGAAGCTACCTATGAACAG | + |
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Preference number: 4 (lower is better) Translates to: LDYSHQQILLILPSNDLPRPTHS*EATYEQ Trigger: CTGTTCATAGGTAGCTTCCCAGGAATGCGTCGGCCT...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGACAGGCATCAGGGATCTaGAAACTGCAAAGCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRQASGI*KLQSMP Trigger: TGGCATGCTTTGCAGTTTCCAGATCCCTGATGCCTG...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | CAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAATGCAATCATTTCTGAAGAGAAGGCCACACTaGGAATGTCGTTCTCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: QQILLILPSNDLPMQSFLKRRPH*ECRSPR Trigger: CCTCGGAGAACGACATTCCCAGTGTGGCCTTCTCTT...CAGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGCAGAGAAGTCACTGCTaGATCATGGGACAGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLQRSHC*IMGQAN Trigger: ATTTGCCTGTCCCATGATTCAGCAGTGACTTCTCTG...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGCTGACTGTCTTTTTCTaGTTGTCTGCTTCCTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLLTVFF*LSASSS Trigger: GCTCGAGGAAGCAGACAAGCAGAAAAAGACAGTCAG...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAAGAGCTGGTCAGTGTTaGTATTCGCCAGTATGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LDYSHQQILLILPSNDLPRAGQC*YSPVCG Trigger: ACCGCATACTGGCGAATACCAACACTGACCAGCTCT...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGGCGGAGTTATTCACATaGCCTTCGTACTGTGTTACA | + |
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Preference number: 4 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLAELFT*PSYCVT Trigger: TGTAACACAGTACGAAGGTCATGTGAATAACTCCGC...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGACCCCATTTTAGTAAATaGCACCAACCATCCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRPHFSK*HQPSTS Trigger: ACTGGTGGATGGTTGGTGTCATTTACTAAAATGGGG...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | CAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAATGCAATCATTTCTGGATGACACCAGGAATTaGCCATCTTGGAGGATTTGC | + |
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Preference number: 4 (lower is better) Translates to: QQILLILPSNDLPMQSFLDDTRN*PSWRIC Trigger: GCAAATCCTCCAAGATGGCCAATTCCTGGTGTCATC...CAGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAAATAGTTGGCGAATCTaGGGAAACCTAGCTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LDYSHQQILLILPSNDLPNSWRI*GNLAGS Trigger: AGAACCAGCTAGGTTTCCTCAGATTCGCCAACTATT...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR TCA 90 bp | ATCCTTTCTTCCTTCCACAGAGATACCTACTATTCAAACTGTAATCACCATAGACTCTTCAAGTACAGATaGTGCATGTATTTCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: ILSSFHRDTYYSNCNHHRLFKYR*CMYFRN Trigger: GTTCCGGAAATACATGCATCATCTGTACTTGAAGAG...TCTATGGTGATTACAGTTTGAATAGTAGGTATCTCTGTGGAAGGAAGAAAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR GCA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAAGTCAAACAGTCTCATaGTTCTCTAAAAGGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LDYSHQQILLILPSNDLPSQTVS*FSKRLL Trigger: CAGAAGCCTTTTAGAGAAGCATGAGACTGTTTGACT...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CCA 90 bp | TATTTGCAAGTGAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTATCATTTCCAGGCTTTaGCTATTAAGAAGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: YLQVRVNRFASYVVITFSIISRL*LLRSSH Trigger: GTGGCTACTTCTTAATAGCCAAAGCCTGGAAATGAT...AGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTCACTTGCAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGAAGCTGCAATCTTTATaGTGTCTTTCACTTTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLKLQSL*CLSLSR Trigger: TCTAGAAAGTGAAAGACAGCATAAAGATTGCAGCTT...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CAA 90 bp | GAGGGTAAACAGATTCGCAAGTTACGTAGTCATTACATTTTCTTTTGTCAACTGGCAGCACGGCACAGCTaGGAGTATCTGCAAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: EGKQIRKLRSHYIFFCQLAARHS*EYLQVP Trigger: TGGGACTTGCAGATACTCCAAGCTGTGCCGTGCTGC...CAGTTGACAAAAGAAAATGTAATGACTACGTAACTTGCGAATCTGTTTACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CAA 90 bp | CAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAATGCAATCATTTCTGCTTCCACCCGCTGCCTaGATTTCCACAGCGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: QQILLILPSNDLPMQSFLLPPAA*ISTAQI Trigger: GATCTGCGCTGTGGAAATCAAGGCAGCGGGTGGAAG...CAGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CAA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAAGCAGTCGCGGTCTTTaGCTCTCCATTTCGTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: LDYSHQQILLILPSNDLPSSRGL*LSISFG Trigger: GCCGAACGAAATGGAGAGCAAAAGACCGCGACTGCT...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS-3UTR CAA 90 bp | CTAGATTACTCTCATCAGCAAATCTTACTAATACTACCTTCGAATGATCTTCCAACTGTCTTTTTCTGCTaGTCTGCTTCCTCGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LDYSHQQILLILPSNDLPTVFFC*SASSSS Trigger: ACTGCTCGAGGAAGCAGACAAGCAGAAAAAGACAGT...TGGAAGATCATTCGAAGGTAGTATTAGTAAGATTTGCTGATGAGAGTAATCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS GCA 72 bp | TCTGCTTGTCTGCTTCCTCGAGCAGTCGCGGTCTTTTaGTCTCCATTTCGTTCGGCGGATGTTCTCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SACLLPRAVAVF*SPFRSADVLPP Trigger: AGGAGGGAGAACATCCGCCGAACGAAATGGAGAGCAAAAGACCGCGACTGCTCGAGGAAGCAGACAAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS CAA 72 bp | TTCTGCTTGTCTGCTTCCTCGAGCAGTCGCGGTCTTTaGCTCTCCATTTCGTTCGGCGGATGTTCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FCLSASSSSRGL*LSISFGGCSPS Trigger: GGAGGGAGAACATCCGCCGAACGAAATGGAGAGCAAAAGACCGCGACTGCTCGAGGAAGCAGACAAGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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| CDS GCA 72 bp | GAAGGTGCATTGAGTCCCACTCTGACTGTCTTTTTCTaGTTGTCTGCTTCCTCGAGCAGTCGCGGTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: EGALSPTLTVFF*LSASSSSRGLL Trigger: CAAAAGACCGCGACTGCTCGAGGAAGCAGACAAGCAGAAAAAGACAGTCAGAGTGGGACTCAATGCACCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319675.5 |
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