RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCAF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000119599

Ensembl transcript IDs: ENST00000353777.7, ENST00000358377.7, ENST00000394234.6, ENST00000505361.5, ENST00000508412.5, ENST00000509153.5, ENST00000509320.5, ENST00000510612.5, ENST00000513337.1, ENST00000514191.5, ENST00000514486.5, ENST00000553457.1, ENST00000555042.5, ENST00000557203.1

Found 476 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACAGATaGAGGATGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACT +
Preference number: 1 (lower is better)
Translates to: RSNLPVLSAGFPKYR*RMQVFLPATQAPRT
Trigger: AGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCATCCTGCATCTGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR GCA 90 bp CAATCTTTTTCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGGT +
Preference number: 1 (lower is better)
Translates to: QSFSVCLLPGAAAVS*SPSPSAGCSLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAAAAAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR TCA 90 bp CCAGGACCTCCCCACCTGCCTGTTTCTGAAGTGACGTTTGCCCACTaGCATGGGATGAGGCTGTCCACCTGGTGGACATTTATTTACACT +
Preference number: 1 (lower is better)
Translates to: PGPPHLPVSEVTFAH*HGMRLSTWWTFIYT
Trigger: AGTGTAAATAAATGTCCACCAGGTGGACAGCCTCATCCCATGTCAGTGGGCAAACGTCACTTCAGAAACAGGCAGGTGGGGAGGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR GCA 90 bp AAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGTAACTACCTaGATCTGCCTCTCAGCAAGGCTGAGCTCTCTCTATCATCCAGCT +
Preference number: 1 (lower is better)
Translates to: KLNPGCSLLLQLVTT*ICLSARLSSLYHPA
Trigger: AGCTGGATGATAGAGAGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 90 bp GCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCACTaGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCTTTTCGTTTTT +
Preference number: 1 (lower is better)
Translates to: ATQAPRTQTISPSHH*ASSMGSWRKKLFVF
Trigger: AAAAACGAAAAGCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR GCA 90 bp GCTCTAAGACCAGAAGTGCTATCTTGGCTGAAGCTGAATCCCGGCTaGAGTTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCA +
Preference number: 1 (lower is better)
Translates to: ALRPEVLSWLKLNPG*SLLLQLVTTCICLS
Trigger: TGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGGTCTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 90 bp CGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATaGGCTCTTGGAGGAAGAAGCTTTTCGTTTTTGCCAATCTTCAGT +
Preference number: 1 (lower is better)
Translates to: RGLKPSHRLITGLLQ*ALGGRSFSFLPIFS
Trigger: ACTGAAGATTGGCAAAAACGAAAAGCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR CCA 90 bp GTGATTCTGATCACTTGTGTGGCTCTAAGACCAGAAGTGCTATCTTaGCTGAAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGTA +
Preference number: 1 (lower is better)
Translates to: VILITCVALRPEVLS*LKLNPGCSLLLQLV
Trigger: TACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGGTCTTAGAGCCACACAAGTGATCAGAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 90 bp AGAGACAACAGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGTGGTaGAATAATGCTGGCCTGATGAAATCCACTCAAACTCCAAACCCA +
Preference number: 1 (lower is better)
Translates to: RDNREPKFLDKIVAW*NNAGLMKSTQTPNP
Trigger: TGGGTTTGGAGTTTGAGTGGATTTCATCAGGCCAGCATTATTCCACCACGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 90 bp AGTAGAGACAACAGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGTaGTGGAATAATGCTGGCCTGATGAAATCCACTCAAACTCCAAAC +
Preference number: 1 (lower is better)
Translates to: SRDNREPKFLDKIVA*WNNAGLMKSTQTPN
Trigger: GTTTGGAGTTTGAGTGGATTTCATCAGGCCAGCATTATTCCACCACGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR TCA 90 bp GGTATAAGCCCTTTCTATAGGAATACCAGTAGAGGTGACAATTCTTaGAGACTGAGAACACATTCTGCAGTGTCAGCAGCTACTATTTCA +
Preference number: 1 (lower is better)
Translates to: GISPFYRNTSRGDNS*RLRTHSAVSAATIS
Trigger: TGAAATAGTAGCTGCTGACACTGCAGAATGTGTTCTCAGTCTTCAAGAATTGTCACCTCTACTGGTATTCCTATAGAAAGGGCTTATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 90 bp GAATGTCCTAACAAAGTAATGCTTCCTAGCCACAAAAATGTTCCATaGGGTATAAGCCCTTTCTATAGGAATACCAGTAGAGGTGACAAT +
Preference number: 1 (lower is better)
Translates to: ECPNKVMLPSHKNVP*GISPFYRNTSRGDN
Trigger: ATTGTCACCTCTACTGGTATTCCTATAGAAAGGGCTTATACCCCATGGAACATTTTTGTGGCTAGGAAGCATTACTTTGTTAGGACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp CTGCTCCTAATCTGCAGATCATGGAGCCACAGGGATGGTAGTAAAGGGGCCACACCCACTGACATGGGATaGGGCTGTCCACCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: LLLICRSWSHRDGSKGATPTDMG*GCPPGG
Trigger: TCCACCAGGTGGACAGCCTCATCCCATGTCAGTGGG...TGTGGCCCCTTTACTACCATCCCTGTGGCTCCATGATCTGCAGATTAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CAA 90 bp GCAATCTTTTTCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: AIFFRLSSSWSSRSL*LSISFCRMLSFVRG
Trigger: CCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAAAAAGATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR TCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACCCACCTGCCTGTTTCTaGAGTGACGTTTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDPPACF*SDVCPL
Trigger: CAGTGGGCAAACGTCACTTCAGAAACAGGCAGGTGG...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATGGTACGGGGAGGGTATaGTTCTCAGTAGGCGGGCAT +
Preference number: 2 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDGTGRV*FSVGGH
Trigger: ATGCCCGCCTACTGAGAACCATACCCTCCCCGTACC...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR CCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACGTTTGCCCACTGACATaGGATGAGGCTGTCCACCTG +
Preference number: 2 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDVCPLT*DEAVHL
Trigger: CAGGTGGACAGCCTCATCCCATGTCAGTGGGCAAAC...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCATGGTCTCAATCTCCTaGCCTCGTGATCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSMVSIS*PRDPPS
Trigger: GGAGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR GCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATTCTCCTTCTGCCGGATaGTCTCTTTCGTCAGGGGGT +
Preference number: 2 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDSPSAG*SLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCGTCTGTCTTCTTCCTaGAGCAGCCGCAGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHRLSSS*SSRSLL
Trigger: CAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR TCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACCTGAGAGACAGTATTTaGTGGGGTGGAACTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDLRDSI*WGGTSP
Trigger: AGGGGAAGTTCCACCCCATCAAATACTGTCTCTCAG...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp TTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCTTTTTCCCTCTGCTGCTaGAGTTGCTGGGATCGCCCC +
Preference number: 2 (lower is better)
Translates to: LLLQLVTTCICLSARLSSFSLCC*SCWDRP
Trigger: GGGGCGATCCCAGCAACTTCAGCAGCAGAGGGAAAA...AGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCCAGGCTGGAGTGCAGTaGCGTGATATCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: FITAAGNYLHLPLSKAELQAGVQ*RDIGSL
Trigger: CAGTGAGCCGATATCACGCCACTGCACTCCAGCCTG...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGTGACGTTTGCCCACTaGCATGGGATGAGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSAVTFAH*HGMRLS
Trigger: GGACAGCCTCATCCCATGTCAGTGGGCAAACGTCAC...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAAATCTCCTGACCTCGTaGTCCACCCTCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSANLLTS*STLLGL
Trigger: GAGGCCAAGGAGGGTGGATCACGAGGTCAGGAGATT...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp GCTGAAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGTAACTACCTGCATGCCTCTCAGCAAGGCTaGGCTCTCTCTATCATCCAG +
Preference number: 2 (lower is better)
Translates to: AEAESRLQFITAAGNYLHASQQG*ALSIIQ
Trigger: CTGGATGATAGAGAGAGCTCAGCCTTGCTGAGAGGC...ATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACACTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 2 (lower is better)
Translates to: QKLREVTSPSSPLASPSTLAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR CCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCCTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 2 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLILAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR TCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGATGCTGGGATCGCCCCTaGGAGACAGTATTTGATGGG +
Preference number: 2 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGCWDRP*ETVFDG
Trigger: CCCATCAAATACTGTCTCTCAGGGGCGATCCCAGCA...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGCTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 2 (lower is better)
Translates to: TQTISPSHHWASSMGSWRLAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR CCA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCATGAGGCTGTCCACCTaGTGGACATTTATTTACACT +
Preference number: 2 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPMRLST*WTFIYT
Trigger: AGTGTAAATAAATGTCCACCAGGTGGACAGCCTCAT...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp GCTGAAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGTAACTACCTGCATTGCCTGTTTCTGAAGTaGCGTTTGCCCACTGACATG +
Preference number: 2 (lower is better)
Translates to: AEAESRLQFITAAGNYLHCLFLK*RLPTDM
Trigger: CATGTCAGTGGGCAAACGTCACTTCAGAAACAGGCA...ATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR GCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 2 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR CCA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCACCAGAAGTGCTATCTTaGCTGAAGCTGAATCCCGGC +
Preference number: 2 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSAPEVLS*LKLNPG
Trigger: GCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGG...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR TCA 90 bp TCAGCATCCTCTGGTGGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGTGTCCACACTCCCCTTaGTTCAGTTCTGTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: SASSGGNVSRDNREPKFLCPHSP*FSSVLG
Trigger: CCCCAAAACAGAACTGAATCAAGGGGAGTGTGGACA...CAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGATGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATTCCTTCCAACGCCTTTaGATAATAACAGCAGAATCC +
Preference number: 2 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDSFQRL*IITAES
Trigger: GGATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGA...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR CAA 90 bp TGTGATTCTGATCACTTGTGTGGCTCTAAGACCAGAAGTGCTATCTaGGCTGAAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: CDSDHLCGSKTRSAI*AEAESRLQFITAAG
Trigger: ACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGGTCTTAGAGCCACACAAGTGATCAGAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCAGGGTGGCACAGCCTaGAGTCTCTGCGAGTCCCAT +
Preference number: 2 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALQGGTA*SLCESH
Trigger: ATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTG...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR CAA 90 bp CAGGCCTTGGGCAGTCATGGATTTCACATTTGTGATTCTGATCACTaGTGTGGCTCTAAGACCAGAAGTGCTATCTTGGCTGAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: QALGSHGFHICDSDH*CGSKTRSAILAEAE
Trigger: TTCAGCTTCAGCCAAGATAGCACTTCTGGTCTTAGAGCCACACAAGTGATCAGAATCACAAATGTGAAATCCATGACTGCCCAAGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTGCAGGTCTTTCTTCCTaGTACCCAGGCACCGAGGAC +
Preference number: 2 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALAGLSS*YPGTED
Trigger: GTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGC...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR GCA 90 bp GCTGAAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGTAACTACCTGCATACTGAGAACACATTCTaGAGTGTCAGCAGCTACTAT +
Preference number: 2 (lower is better)
Translates to: AEAESRLQFITAAGNYLHTENTF*SVSSYY
Trigger: ATAGTAGCTGCTGACACTGCAGAATGTGTTCTCAGT...ATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGAAGGCTGTCCACCTGGTaGACATTTATTTACACTCCT +
Preference number: 2 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGRLSTW*TFIYTP
Trigger: AGGAGTGTAAATAAATGTCCACCAGGTGGACAGCCT...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp CTGCAGTGTCAGCAGCTACTATTTCAGTGTGAAAGCATTGAGCCTGCACACTGTAAGATAGTTGCGTGGTaGAATAATGCTGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: LQCQQLLFQCESIEPAHCKIVAW*NNAGLM
Trigger: CATCAGGCCAGCATTATTCCACCACGCAACTATCTT...ACAGTGTGCAGGCTCAATGCTTTCACACTGAAATAGTAGCTGCTGACACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CCA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGATAAGATAGTTGCGTaGTGGAATAATGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSADKIVA*WNNAGL
Trigger: CAGGCCAGCATTATTCCACCACGCAACTATCTTATC...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CAA 90 bp TCCTCTGGTGGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTaGGATAAGATAGTTGCGTGGTGGAATAATGCTGGCCTGATGAAA +
Preference number: 2 (lower is better)
Translates to: SSGGNVSRDNREPKF*DKIVAWWNNAGLMK
Trigger: TTTCATCAGGCCAGCATTATTCCACCACGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR GCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 2 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLINTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR GCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCACTCTCCATCTCCTTCTaGCGGATGCTCTCTTTCGTC +
Preference number: 2 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSLSISF*RMLSFV
Trigger: GACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAG...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR GCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 2 (lower is better)
Translates to: GLKPSHRLITGLLQWALGNTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR CCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCCTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 2 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLLAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
3UTR-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAACTGGGCTTCTTCAATaGGCTCTTGGAGGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSTGLLQ*ALGGRS
Trigger: GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGT...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCATCACCGTCTCATCACTaGGCTTCTTCAATGGGCTCT +
Preference number: 2 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSSPSHH*ASSMGS
Trigger: AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGA...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCACCGGTCTATTCCTGCTaGGTGACTATTGACGAACAG +
Preference number: 2 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSPVYSC*VTIDEQ
Trigger: CTGTTCGTCAATAGTCACCCAGCAGGAATAGACCGG...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAAAATCCACATGGCTCTaGGCTGTGCCCTGCAGAATT +
Preference number: 2 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSKSTWL*AVPCRI
Trigger: AATTCTGCAGGGCACAGCCCAGAGCCATGTGGATTT...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR TCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTAGCAGCCCAAGCTCATaGTCTCCTAAGTCATTCACA +
Preference number: 2 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALSSPSS*SPKSFT
Trigger: TGTGAATGACTTAGGAGATCATGAGCTTGGGCTGCT...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
3UTR-3UTR GCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCATTCCCCAAGTACAGATaGAGGATGCAGGTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSFPKYR*RMQVFL
Trigger: AAGAAAGACCTGCATCCTGCATCTGTACTTGGGGAA...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTAGTACAGATGCAGGATaGAGGTCTTTCTTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALSTDAG*RSFFLL
Trigger: TAGCAGGAAGAAAGACCTGCATCCTGCATCTGTACT...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTTTCCCCAAGTACAGATaGAGGATGCAGGTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALFPKYR*RMQVFL
Trigger: AAGAAAGACCTGCATCCTGCATCTGTACTTGGGGAA...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTACTGAAGCAGTTATTTaGTTGGATATTCAGGGACCA +
Preference number: 2 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALTEAVI*LDIQGP
Trigger: TGGTCCCTGAATATCCAAGCAAATAACTGCTTCAGT...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR GCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 2 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSNTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
3UTR-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 2 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLNTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
3UTR GCA 72 bp CTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACAGATaGAGGATGCAGGTCTTTCTTCCTGCTACCCAGGCA +
Preference number: 3 (lower is better)
Translates to: LPVLSAGFPKYR*RMQVFLPATQA
Trigger: TGCCTGGGTAGCAGGAAGAAAGACCTGCATCCTGCATCTGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
3UTR GCA 72 bp TCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCG +
Preference number: 3 (lower is better)
Translates to: SVCLLPGAAAVS*SPSPSAGCSLS
Trigger: CGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR TCA 72 bp CCCCACCTGCCTGTTTCTGAAGTGACGTTTGCCCACTaGCATGGGATGAGGCTGTCCACCTGGTGGACATTT +
Preference number: 3 (lower is better)
Translates to: PHLPVSEVTFAH*HGMRLSTWWTF
Trigger: AAATGTCCACCAGGTGGACAGCCTCATCCCATGTCAGTGGGCAAACGTCACTTCAGAAACAGGCAGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CAA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSSSRSL*LSISFC
Trigger: GCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCT...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR CAA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCAGGTATTGCTCATCTaGGAGGATCCGCACAGAGGT +
Preference number: 3 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDQVLLI*EDPHRG
Trigger: ACCTCTGTGCGGATCCTCCAAGATGAGCAATACCTG...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR CAA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGACCTCTGCTGCTGAAGTaGCTGGGATCGCCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGPLLLK*LGSPLR
Trigger: TCTCAGGGGCGATCCCAGCAACTTCAGCAGCAGAGG...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR GCA 72 bp CCCGGCTGCAGTTTATTACTGCAGCTGGTAACTACCTaGATCTGCCTCTCAGCAAGGCTGAGCTCTCTCTAT +
Preference number: 3 (lower is better)
Translates to: PGCSLLLQLVTT*ICLSARLSSLY
Trigger: ATAGAGAGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CAA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACAGGGAGCCCAAGTTTTaGGATAAGATAGTTGCGTGG +
Preference number: 3 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDREPKF*DKIVAW
Trigger: CCACGCAACTATCTTATCCAAAAACTTGGGCTCCCT...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 72 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTaGAGACCTTCAGCAGGAGAAGAGGACAGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: WVTAAQKHDIHY*RPSAGEEDRPW
Trigger: CCAAGGCCTGTCCTCTTCTCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CAA 90 bp TCAGCATCCTCTGGTGGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGCCTGAGAGACAGTATTaGATGGGGTGGAACTTCCCC +
Preference number: 3 (lower is better)
Translates to: SASSGGNVSRDNREPKFLPERQY*MGWNFP
Trigger: GGGGAAGTTCCACCCCATCAAATACTGTCTCTCAGG...CAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGATGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR GCA 72 bp CCAGAAGTGCTATCTTGGCTGAAGCTGAATCCCGGCTaGAGTTTATTACTGCAGCTGGTAACTACCTGCATC +
Preference number: 3 (lower is better)
Translates to: PEVLSWLKLNPG*SLLLQLVTTCI
Trigger: GATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CAA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATTTCAGACTTTGCAGGTaGATGATACCATACTTGGAG +
Preference number: 3 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDFRLCR*MIPYLE
Trigger: CTCCAAGTATGGTATCATCAACCTGCAAAGTCTGAA...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR-3UTR CAA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCACTGTCCACACTCCCCTaGATTCAGTTCTGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSALSTLP*IQFCFG
Trigger: CCCAAAACAGAACTGAATCAAGGGGAGTGTGGACAG...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR GCA 72 bp TGCAGTTTATTACTGCAGCTGGTAACTACCTGCATCTaGCTCTCAGCAAGGCTGAGCTCTCTCTATCATCCA +
Preference number: 3 (lower is better)
Translates to: CSLLLQLVTTCI*LSARLSSLYHP
Trigger: TGGATGATAGAGAGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 72 bp ATCACTTGTGTGGCTCTAAGACCAGAAGTGCTATCTTaGCTGAAGCTGAATCCCGGCTGCAGTTTATTACTG +
Preference number: 3 (lower is better)
Translates to: ITCVALRPEVLS*LKLNPGCSLLL
Trigger: CAGTAATAAACTGCAGCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGGTCTTAGAGCCACACAAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 72 bp AGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGTGGTaGAATAATGCTGGCCTGATGAAATCCACTCAAACT +
Preference number: 3 (lower is better)
Translates to: REPKFLDKIVAW*NNAGLMKSTQT
Trigger: AGTTTGAGTGGATTTCATCAGGCCAGCATTATTCCACCACGCAACTATCTTATCCAAAAACTTGGGCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CCA 72 bp AACAGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGTaGTGGAATAATGCTGGCCTGATGAAATCCACTCAA +
Preference number: 3 (lower is better)
Translates to: NREPKFLDKIVA*WNNAGLMKSTQ
Trigger: TTGAGTGGATTTCATCAGGCCAGCATTATTCCACCACGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR TCA 72 bp CATAACTTCTTTTCTCAGCATCCTCTGGTGGAAATGTaGGTAGAGACAACAGGGAGCCCAAGTTTTTGGATA +
Preference number: 3 (lower is better)
Translates to: HNFFSQHPLVEM*VETTGSPSFWI
Trigger: TATCCAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGATGCTGAGAAAAGAAGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR TCA 72 bp CCTTTCTATAGGAATACCAGTAGAGGTGACAATTCTTaGAGACTGAGAACACATTCTGCAGTGTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PFYRNTSRGDNS*RLRTHSAVSAA
Trigger: AGCTGCTGACACTGCAGAATGTGTTCTCAGTCTTCAAGAATTGTCACCTCTACTGGTATTCCTATAGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR-3UTR CAA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTGAAGCAGTTATTTGCTaGGATATTCAGGGACCAGGC +
Preference number: 3 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALEAVIC*DIQGPG
Trigger: GCCTGGTCCCTGAATATCCAAGCAAATAACTGCTTC...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR GCA 72 bp GCCCAAGCTCATGATCTCCTAAGTCATTCACAGAAGTaGATGTCACACCATGATTCTTCTCTTGGTTTTATT +
Preference number: 3 (lower is better)
Translates to: AQAHDLLSHSQK*MSHHDSSLGFI
Trigger: AATAAAACCAAGAGAAGAATCATGGTGTGACATGCACTTCTGTGAATGACTTAGGAGATCATGAGCTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRPWPES*AGCAAR
Trigger: CCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGG...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHPWPES*AGCAAR
Trigger: CCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCCCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSPWPES*AGCAAR
Trigger: CCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGG...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACCCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYPWPES*AGCAAR
Trigger: CCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGG...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCGGGGATGGGCTAGGTTaGCAACTCTCCCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPGDGLG*QLSPQL
Trigger: GAGCTGTGGGGAGAGTTGTCAACCTAGCCCATCCCC...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTGTGAGCGGGCTGTGCTaGCCGGGAGTCAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSVSGLC*PGVRPV
Trigger: GACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCAC...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000555042.5
CDS-3UTR GCA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCGTGAGCGGGCTGTGCTaGCCGGGAGTCAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSVSGLC*PGVRPV
Trigger: GACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCAC...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAG +
Preference number: 4 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPRRSQL*QTRLTE
Trigger: CTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCT...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCCTCCGGCTCAGCTCTaGAGGAGTTGGAGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHPPAQL*RSWSEA
Trigger: CGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
CDS-3UTR GCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCCTCCGGCTCAGCTCTaGAGGAGTTGGAGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSPPAQL*RSWSEA
Trigger: CGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
CDS-3UTR GCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTCCTCCGGCTCAGCTCTaGAGGAGTTGGAGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSPPAQL*RSWSEA
Trigger: CGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGG...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
CDS-3UTR GCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGAGCGGGCTGTGCTaGCCGGGAGTCAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSVSGLC*PGVRPV
Trigger: GACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCAC...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLIIVSGL*CPGVRP
Trigger: AGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGAT...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHIVSGL*CPGVRP
Trigger: AGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGAT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAAGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWEAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CCA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCAGGGTGGCACAGCCTaGAGTCTCTGCGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRQGGTA*SLCESH
Trigger: ATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTG...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACGTGACGTTTGCCCACTaGCATGGGATGAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDVTFAH*HGMRLS
Trigger: GGACAGCCTCATCCCATGTCAGTGGGCAAACGTCAC...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRIVSGL*CPGVRP
Trigger: AGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGAT...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYIVSGL*CPGVRP
Trigger: AGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGAT...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAG +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHRRSQL*QTRLTE
Trigger: CTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAAGGAAACTGCAGAGCATaGCAGGCCGGTCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWEGNCRA*QAGLFL
Trigger: CAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCC...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR GCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAAACGTGGCCTTCGTACTaGCTTACGCACTTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWETWPSY*LTHFVV
Trigger: GACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGT...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR GCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGTGAGCGGGCTGTGCTaGCCGGGAGTCAGACCTGTT +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGVSGLC*PGVRPV
Trigger: AACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCAC...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394234.6
CDS-3UTR CCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCAGGGTGGCACAGCCTaGAGTCTCTGCGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSQGGTA*SLCESH
Trigger: ATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCAGGGTGGCACAGCCTaGAGTCTCTGCGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHQGGTA*SLCESH
Trigger: ATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCCCCGTCCTCTCCGCTaGCTTCCCCAAGTACAGATG +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSPRPLR*LPQVQM
Trigger: CATCTGTACTTGGGGAAGCCAGCGGAGAGGACGGGG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACTCTCTGCGAGTCCCATaGGGCATAGCAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDSLRVP*GIAECG
Trigger: CCCACATTCTGCTATGCCTCATGGGACTCGCAGAGA...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp AGCCACCGCGCCGGGCCGGGGCCAAGAATCTTTACAATGACCATAACTTCTTTTTTTTCCCTCTGCTGCTaGAGTTGCTGGGATCGCCCC +
Preference number: 4 (lower is better)
Translates to: SHRAGPGPRIFTMTITSFFSLCC*SCWDRP
Trigger: GGGGCGATCCCAGCAACTTCAGCAGCAGAGGGAAAA...AAAAGAAGTTATGGTCATTGTAAAGATTCTTGGCCCCGGCCCGGCGCGGTGGCT
56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACATGGTCTCAATCTCCTaGCCTCGTGATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDMVSIS*PRDPPS
Trigger: GGAGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAG +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGRRSQL*QTRLTE
Trigger: CTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCT...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAG +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYRRSQL*QTRLTE
Trigger: CTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCT...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTTCTCCTTCTGCCGGATaGTCTCTTTCGTCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRSPSAG*SLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACTCTCCTTCTGCCGGATaGTCTCTTTCGTCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDSPSAG*SLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCCTCTCCATCTCCTTCTaGCGGATGCTCTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPLSISF*RMLSFV
Trigger: GACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAG...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAACTCTGGGCTGTGCCCTaGAGAATTAGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWELWAVP*RISCRS
Trigger: ACTCCTACAGCTAATTCTGCAGGGCACAGCCCAGAG...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR GCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTGCAGGTCTTTCTTCCTaGTACCCAGGCACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWAAGLSS*YPGTED
Trigger: GTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGC...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCAGCTCTGCAGGAGTTaGAGCGAAGCGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSQLCRS*SEACKD
Trigger: GTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000358377.7
CDS-3UTR CCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTCAGGGTGGCACAGCCTaGAGTCTCTGCGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSQGGTA*SLCESH
Trigger: ATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTG...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACGCCTTACGCACTTCGTaGTCCTCAGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHALRTS*SSGPTA
Trigger: AGCTGTGGGACCTGAGGACCACGAAGTGCGTAAGGC...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATGCCTTACGCACTTCGTaGTCCTCAGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDALRTS*SSGPTA
Trigger: AGCTGTGGGACCTGAGGACCACGAAGTGCGTAAGGC...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCGGTACGGGGAGGGTATaGTTCTCAGTAGGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSGTGRV*FSVGGH
Trigger: ATGCCCGCCTACTGAGAACCATACCCTCCCCGTACC...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTGGTACGGGGAGGGTATaGTTCTCAGTAGGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSGTGRV*FSVGGH
Trigger: ATGCCCGCCTACTGAGAACCATACCCTCCCCGTACC...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCGGTACGGGGAGGGTATaGTTCTCAGTAGGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLIGTGRV*FSVGGH
Trigger: ATGCCCGCCTACTGAGAACCATACCCTCCCCGTACC...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCACGAGAAGGCCACACTaGGAATGTCGGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLITRRPH*ECRPWR
Trigger: CCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGT...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACACGAGAAGGCCACACTaGGAATGTCGGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHTRRPH*ECRPWR
Trigger: CCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATACGAGAAGGCCACACTaGGAATGTCGGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDTRRPH*ECRPWR
Trigger: CCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGT...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGCCCCGTCCTCTCCGCTaGCTTCCCCAAGTACAGATG +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRPRPLR*LPQVQM
Trigger: CATCTGTACTTGGGGAAGCCAGCGGAGAGGACGGGG...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACCCCCGTCCTCTCCGCTaGCTTCCCCAAGTACAGATG +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYPRPLR*LPQVQM
Trigger: CATCTGTACTTGGGGAAGCCAGCGGAGAGGACGGGG...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCCAGGCTGGAGTGCAGTaGCGTGATATCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSQAGVQ*RDIGSL
Trigger: CAGTGAGCCGATATCACGCCACTGCACTCCAGCCTG...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CAA 72 bp TTCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGCCGGATGCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: FRLSSSWSSRSL*LSISFCRMLSF
Trigger: GAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR TCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCACCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSPWPES*AGCAAR
Trigger: CCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGG...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCCCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLPWPES*AGCAAR
Trigger: CCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGG...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGATGTGCCAGACGAGGTTaGCGGAGACTCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGCARRG*RRLVIT
Trigger: GGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACA...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACTGTGCCAGACGAGGTTaGCGGAGACTCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYCARRG*RRLVIT
Trigger: GGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACA...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTCTCTGCGAGTCCCATaGGGCATAGCAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHSLRVP*GIAECG
Trigger: CCCACATTCTGCTATGCCTCATGGGACTCGCAGAGA...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAGTGAGCGGGCTGTGCTaGCCGGGAGTCAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKVSGLC*PGVRPV
Trigger: GACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCAC...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CTGCAGTGTCAGCAGCTACTATTTCAGTGTGAAAGCATTGAGCCTGCACACTGTATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: LQCQQLLFQCESIEPAHCIVSGL*CPGVRP
Trigger: AGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGAT...ACAGTGTGCAGGCTCAATGCTTTCACACTGAAATAGTAGCTGCTGACACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTTCTCCTTCTGCCGGATaGTCTCTTTCGTCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWASPSAG*SLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCGGAAACTGCAGAGCATaGCAGGCCGGTCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLIGNCRA*QAGLFL
Trigger: CAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCC...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTACGTGGCCTTCGTACTaGCTTACGCACTTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSTWPSY*LTHFVV
Trigger: GACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGT...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTACGTGGCCTTCGTACTaGCTTACGCACTTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWATWPSY*LTHFVV
Trigger: GACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGT...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACACGTGGCCTTCGTACTaGCTTACGCACTTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHTWPSY*LTHFVV
Trigger: GACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp AGCCACCGCGCCGGGCCGGGGCCAAGAATCTTTACAATGACCATAACTTCTTTTACGTGGCCTTCGTACTaGCTTACGCACTTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SHRAGPGPRIFTMTITSFTWPSY*LTHFVV
Trigger: GACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGT...AAAAGAAGTTATGGTCATTGTAAAGATTCTTGGCCCCGGCCCGGCGCGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCACGTGGCCTTCGTACTaGCTTACGCACTTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLITWPSY*LTHFVV
Trigger: GACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGT...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGGCAGGTCTTTCTTCCTaGTACCCAGGCACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRAGLSS*YPGTED
Trigger: GTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGC...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACGCAGGTCTTTCTTCCTaGTACCCAGGCACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYAGLSS*YPGTED
Trigger: GTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGC...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGAGTTGGAGCGAAGCGTaGAAGGACCCGGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVSWSEA*KDPERP
Trigger: TGGTCTTTCCGGGTCCTTGCACGCTTCGCTCCAACT...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509320.5
CDS-3UTR CCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGCAGCTCTGCAGGAGTTaGAGCGAAGCGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRQLCRS*SEACKD
Trigger: GTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTG...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000358377.7
CDS-3UTR CCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAAAACCAAGGGTTCTGCTaGTGGCTTCTTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWENQGFC*WLLLPC
Trigger: ACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTT...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCGTCTGTCTTCTTCCTaGAGCAGCCGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWARLSSS*SSRSLL
Trigger: CAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACG...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCGTCTGTCTTCTTCCTaGAGCAGCCGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSRLSSS*SSRSLL
Trigger: CAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTCATGAAACAGGCGGGTaGCCTTCCATCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSHETGG*PSIPCL
Trigger: AAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATG...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCATGAAACAGGCGGGTaGCCTTCCATCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHHETGG*PSIPCL
Trigger: AAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCATGAAACAGGCGGGTaGCCTTCCATCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWAHETGG*PSIPCL
Trigger: AAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATG...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCATGAAACAGGCGGGTaGCCTTCCATCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDHETGG*PSIPCL
Trigger: AAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATG...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACGCCTTACGCACTTCGTaGTCCTCAGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYALRTS*SSGPTA
Trigger: AGCTGTGGGACCTGAGGACCACGAAGTGCGTAAGGC...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGCCTTACGCACTTCGTaGTCCTCAGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSALRTS*SSGPTA
Trigger: AGCTGTGGGACCTGAGGACCACGAAGTGCGTAAGGC...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGACGAGAAGGCCACACTaGGAATGTCGGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRTRRPH*ECRPWR
Trigger: CCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGT...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAAAAATCCACATGGCTCTaGGCTGTGCCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWEKSTWL*AVPCRI
Trigger: AATTCTGCAGGGCACAGCCCAGAGCCATGTGGATTT...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAACTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWELAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CCA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAACCGGTCTATTCCTGCTaGGTGACTATTGACGAACAG +
Preference number: 4 (lower is better)
Translates to: VAQPGVSASPMRHSRMWEPVYSC*VTIDEQ
Trigger: CTGTTCGTCAATAGTCACCCAGCAGGAATAGACCGG...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CCA 90 bp CTGCTCCTAATCTGCAGATCATGGAGCCACAGGGATGGTAGTAAAGGGGCCACAGTTTGCCCACTGACATaGGATGAGGCTGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: LLLICRSWSHRDGSKGATVCPLT*DEAVHL
Trigger: CAGGTGGACAGCCTCATCCCATGTCAGTGGGCAAAC...TGTGGCCCCTTTACTACCATCCCTGTGGCTCCATGATCTGCAGATTAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTCAGAATCACGGAGTCTaGACCAAGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSQNHGV*TKGSAG
Trigger: ACCAGCAGAACCCTTGGTTCAGACTCCGTGATTCTG...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000555042.5
CDS-3UTR TCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALPWPES*AGCAAR
Trigger: CCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGG...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp GCTGAAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGTAACTACCTGCATTGTGCCAGACGAGGTTaGCGGAGACTCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: AEAESRLQFITAAGNYLHCARRG*RRLVIT
Trigger: GGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACA...ATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGATCTCTGCGAGTCCCATaGGGCATAGCAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGSLRVP*GIAECG
Trigger: CCCACATTCTGCTATGCCTCATGGGACTCGCAGAGA...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCTGCTGGGTGACTATTaGCGAACAGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHLLGDY*RTVMLG
Trigger: TCCCAGCATCACTGTTCGTCAATAGTCACCCAGCAG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGCTGCTGGGTGACTATTaGCGAACAGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVLLGDY*RTVMLG
Trigger: TCCCAGCATCACTGTTCGTCAATAGTCACCCAGCAG...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACTGTCCACACTCCCCTTaGTTCAGTTCTGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDCPHSP*FSSVLG
Trigger: CCCCAAAACAGAACTGAATCAAGGGGAGTGTGGACA...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGACCCACTGACATGGGATaGGGCTGTCCACCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGPTDMG*GCPPGG
Trigger: TCCACCAGGTGGACAGCCTCATCCCATGTCAGTGGG...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCTAATCTCCTGACCTCGTaGTCCACCCTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLLQLVTTCICLSARLSSNLLTS*STLLGL
Trigger: GAGGCCAAGGAGGGTGGATCACGAGGTCAGGAGATT...AGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCTGAACCAAGGGTTCTaGTGGTGGCTTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHLNQGF*WWLLLP
Trigger: TGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCCTGAACCAAGGGTTCTaGTGGTGGCTTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSLNQGF*WWLLLP
Trigger: TGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAG...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKIVSGL*CPGVRP
Trigger: AGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGAT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACACTCTCCATCTCCTTCTaGCGGATGCTCTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: QKLREVTSPSSPLASPSTLSISF*RMLSFV
Trigger: GACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAG...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCTCTCCATCTCCTTCTaGCGGATGCTCTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSLSISF*RMLSFV
Trigger: GACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGGAAACTGCAGAGCATaGCAGGCCGGTCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSGNCRA*QAGLFL
Trigger: CAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCC...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTACGTGGCCTTCGTACTaGCTTACGCACTTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSTWPSY*LTHFVV
Trigger: GACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGT...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGCTCTGGGCTGTGCCCTaGAGAATTAGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVLWAVP*RISCRS
Trigger: ACTCCTACAGCTAATTCTGCAGGGCACAGCCCAGAG...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCTCTGGGCTGTGCCCTaGAGAATTAGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSLWAVP*RISCRS
Trigger: ACTCCTACAGCTAATTCTGCAGGGCACAGCCCAGAG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCCTCTGGGCTGTGCCCTaGAGAATTAGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLILWAVP*RISCRS
Trigger: ACTCCTACAGCTAATTCTGCAGGGCACAGCCCAGAG...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCTCTGGGCTGTGCCCTaGAGAATTAGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHLWAVP*RISCRS
Trigger: ACTCCTACAGCTAATTCTGCAGGGCACAGCCCAGAG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACACATGGCTCTGGGCTGTaGCCTGCAGAATTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QKLREVTSPSSPLASPSTHGSGL*PAELAV
Trigger: TACAGCTAATTCTGCAGGGCACAGCCCAGAGCCATG...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCATGGCTCTGGGCTGTaGCCTGCAGAATTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWAHGSGL*PAELAV
Trigger: TACAGCTAATTCTGCAGGGCACAGCCCAGAGCCATG...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCATGGCTCTGGGCTGTaGCCTGCAGAATTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHHGSGL*PAELAV
Trigger: TACAGCTAATTCTGCAGGGCACAGCCCAGAGCCATG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCCATGGCTCTGGGCTGTaGCCTGCAGAATTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLIHGSGL*PAELAV
Trigger: TACAGCTAATTCTGCAGGGCACAGCCCAGAGCCATG...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCAAGGGTTCTGCTGGTaGCTTCTTCTCCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDQGFCW*LLLPCR
Trigger: ACGACATGGGAGAAGAAGCCACCAGCAGAACCCTTG...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CTGCAGTGTCAGCAGCTACTATTTCAGTGTGAAAGCATTGAGCCTGCACACTGTCAGGGTGGCACAGCCTaGAGTCTCTGCGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LQCQQLLFQCESIEPAHCQGGTA*SLCESH
Trigger: ATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTG...ACAGTGTGCAGGCTCAATGCTTTCACACTGAAATAGTAGCTGCTGACACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCGCCTTACGCACTTCGTaGTCCTCAGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELALRTS*SSGPTA
Trigger: AGCTGTGGGACCTGAGGACCACGAAGTGCGTAAGGC...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGCAGAATCACGGAGTCTaGACCAAGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRQNHGV*TKGSAG
Trigger: ACCAGCAGAACCCTTGGTTCAGACTCCGTGATTCTG...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000555042.5
CDS-3UTR TCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTCCTGGGTGACTATTaGCGAACAGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHFLGDY*RTVMLG
Trigger: TCCCAGCATCACTGTTCGTCAATAGTCACCCAGGAA...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGAGCCTTCCGGTTGGTaGAGTAGAGGTTTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGEPSGW*SRGFRA
Trigger: TGCACGAAAACCTCTACTTCACCAACCGGAAGGCTC...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS-3UTR TCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGCTGCTGGGTGACTATTaGCGAACAGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRLLGDY*RTVMLG
Trigger: TCCCAGCATCACTGTTCGTCAATAGTCACCCAGCAG...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555042.5
CDS-3UTR GCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACCTGAACCAAGGGTTCTaGTGGTGGCTTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYLNQGF*WWLLLP
Trigger: TGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAG...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGACTGAACCAAGGGTTCTaGTGGTGGCTTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGLNQGF*WWLLLP
Trigger: TGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAG...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000555042.5
CDS-3UTR GCA 90 bp GAACACCTTGAGCGTAGGGGTCTTCAGACTTTGCAGGTTGATGATACCATACTTAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAG +
Preference number: 4 (lower is better)
Translates to: EHLERRGLQTLQVDDTILRRSQL*QTRLTE
Trigger: CTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCT...AAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR GCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWALSSGG*SCYVQG
Trigger: TCCCTGGACATAACAACTGCAACCCCCTGACGAAAG...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLILSSGG*SCYVQG
Trigger: TCCCTGGACATAACAACTGCAACCCCCTGACGAAAG...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSLSSGG*SCYVQG
Trigger: TCCCTGGACATAACAACTGCAACCCCCTGACGAAAG...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGCTCTCCATCTCCTTCTaGCGGATGCTCTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRLSISF*RMLSFV
Trigger: GACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAG...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGAGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCGGAAACTGCAGAGCATaGCAGGCCGGTCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELGNCRA*QAGLFL
Trigger: CAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCC...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTAGGCCGGTCTATTCCTaGTGGGTGACTATTGACGAA +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWARPVYS*WVTIDE
Trigger: TTCGTCAATAGTCACCCAGCAGGAATAGACCGGCCT...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555042.5
CDS-3UTR GCA 90 bp CTGCTCCTAATCTGCAGATCATGGAGCCACAGGGATGGTAGTAAAGGGGCCACACCTTCCTCAAGTACCTaGCACCAGGATTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLICRSWSHRDGSKGATPSSST*HQDSFF
Trigger: GAAGAAGGAATCCTGGTGGCAGGTACTTGAGGAAGG...TGTGGCCCCTTTACTACCATCCCTGTGGCTCCATGATCTGCAGATTAGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TCAGCATCCTCTGGTGGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGGTTGCCAGGCTGGAGTaGAGTGGCGTGATATCGGCT +
Preference number: 4 (lower is better)
Translates to: SASSGGNVSRDNREPKFLVARLE*SGVISA
Trigger: AGCCGATATCACGCCACTGCACTCCAGCCTGGCAAC...CAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGATGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTCAAGGGTTCTGCTGGTaGCTTCTTCTCCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSQGFCW*LLLPCR
Trigger: ACGACATGGGAGAAGAAGCCACCAGCAGAACCCTTG...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATAACCAAGGGTTCTGCTaGTGGCTTCTTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDNQGFC*WLLLPC
Trigger: ACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTT...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACAACCAAGGGTTCTGCTaGTGGCTTCTTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHNQGFC*WLLLPC
Trigger: ACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACAGGGTGGCACAGCCTaGAGTCTCTGCGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKQGGTA*SLCESH
Trigger: ATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCAAATCCACATGGCTCTaGGCTGTGCCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLIKSTWL*AVPCRI
Trigger: AATTCTGCAGGGCACAGCCCAGAGCCATGTGGATTT...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATAAATCCACATGGCTCTaGGCTGTGCCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDKSTWL*AVPCRI
Trigger: AATTCTGCAGGGCACAGCCCAGAGCCATGTGGATTT...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWALAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACCTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHLAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCTAGCAGCCAGAGGATaGGATCTGTGTACACTGAGT +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSLAARG*DLCTLS
Trigger: ACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACAACTGGGCTTCTTCAATaGGCTCTTGGAGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QKLREVTSPSSPLASPSTTGLLQ*ALGGRS
Trigger: GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGT...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACACTGGGCTTCTTCAATaGGCTCTTGGAGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHTGLLQ*ALGGRS
Trigger: GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCTCACCGTCTCATCACTaGGCTTCTTCAATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLISPSHH*ASSMGS
Trigger: AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGA...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACAGAGCCGGTCACTGTTaGTATCTGCCTTTTTCCGTC +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHRAGHC*YLPFSV
Trigger: GACGGAAAAAGGCAGATACCAACAGTGACCGGCTCT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509153.5
CDS-3UTR CCA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGCCGGTCTATTCCTGCTaGGTGACTATTGACGAACAG +
Preference number: 4 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVPVYSC*VTIDEQ
Trigger: CTGTTCGTCAATAGTCACCCAGCAGGAATAGACCGG...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCAAAGTCATTACATCCTaGGGATGGGCTAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPKVITS*GWARLT
Trigger: TGTCAACCTAGCCCATCCCCAGGATGTAATGACTTT...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAATGTGCCAGACGAGGTTaGCGGAGACTCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKCARRG*RRLVIT
Trigger: GGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACA...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGTTCCTGGGTGACTATTaGCGAACAGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRFLGDY*RTVMLG
Trigger: TCCCAGCATCACTGTTCGTCAATAGTCACCCAGGAA...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCCGGTCTATTCCTGGGTaGCTATTGACGAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSRSIPG*LLTNSD
Trigger: ATCACTGTTCGTCAATAGTCACCCAGGAATAGACCG...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACAAAAACCAATTTCCTTTaGCGCCGGGCCCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: QKLREVTSPSSPLASPSTKTNFL*RRALES
Trigger: AGATTCAAGGGCCCGGCGTCAAAGGAAATTGGTTTT...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGAAAACCAATTTCCTTTaGCGCCGGGCCCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVKTNFL*RRALES
Trigger: AGATTCAAGGGCCCGGCGTCAAAGGAAATTGGTTTT...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCAGCAGCCCAAGCTCATaGTCTCCTAAGTCATTCACA +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSSSPSS*SPKSFT
Trigger: TGTGAATGACTTAGGAGATCATGAGCTTGGGCTGCT...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGAGCCTCTCAGCAAGGCTaGGCTCTCTCTATCATCCAG +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGASQQG*ALSIIQ
Trigger: CTGGATGATAGAGAGAGCTCAGCCTTGCTGAGAGGC...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCAGCCCAGAAACATaGTATACACTACTGGAGACC +
Preference number: 4 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSSSPET*YTLLET
Trigger: GGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCT...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCGTGAGCGGGCTGTGCTaGCCGGGAGTCAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLVSGLC*PGVRPV
Trigger: GACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCAC...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYLSSGG*SCYVQG
Trigger: TCCCTGGACATAACAACTGCAACCCCCTGACGAAAG...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKAAAVS*SPSPSA
Trigger: GGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGC...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp AGCCACCGCGCCGGGCCGGGGCCAAGAATCTTTACAATGACCATAACTTCTTTTAAGCTGAATCCCGGCTaGAGTTTATTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SHRAGPGPRIFTMTITSFKLNPG*SLLLQL
Trigger: CAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTT...AAAAGAAGTTATGGTCATTGTAAAGATTCTTGGCCCCGGCCCGGCGCGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACCTCAAGCTCCCTAAGTaGTGGAATTATAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDLKLPK*WNYSYH
Trigger: GTGGTAGCTATAATTCCAGCACTTAGGGAGCTTGAG...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp GAACACCTTGAGCGTAGGGGTCTTCAGACTTTGCAGGTTGATGATACCATACTTCAGCTCTGCAGGAGTTaGAGCGAAGCGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: EHLERRGLQTLQVDDTILQLCRS*SEACKD
Trigger: GTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTG...AAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTAACCAAGGGTTCTGCTaGTGGCTTCTTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSNQGFC*WLLLPC
Trigger: ACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTT...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGACGTCTGTCTTCTTCCTaGAGCAGCCGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGRLSSS*SSRSLL
Trigger: CAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACG...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACAGGCCGGTCTATTCCTaGGTGACTATTGACGAACAG +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYRPVYS*VTIDEQ
Trigger: CTGTTCGTCAATAGTCACCCAGGAATAGACCGGCCT...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR CCA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCAAGCAGTTATTTGCTTaGATATTCAGGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPKQLFA*IFRDQA
Trigger: TGCCTGGTCCCTGAATATCCAAGCAAATAACTGCTT...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGACATGAAACAGGCGGGTaGCCTTCCATCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGHETGG*PSIPCL
Trigger: AAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATG...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAGGTACGGGGAGGGTATaGTTCTCAGTAGGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKGTGRV*FSVGGH
Trigger: ATGCCCGCCTACTGAGAACCATACCCTCCCCGTACC...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAATCCACATGGCTCTaGGCTGTGCCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRKSTWL*AVPCRI
Trigger: AATTCTGCAGGGCACAGCCCAGAGCCATGTGGATTT...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACAAATCCACATGGCTCTaGGCTGTGCCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYKSTWL*AVPCRI
Trigger: AATTCTGCAGGGCACAGCCCAGAGCCATGTGGATTT...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACACGTCAGCCAGTTAGGTaGATGCGTTTTGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: QKLREVTSPSSPLASPSTRQPVR*MRFGVV
Trigger: TACAACACCAAAACGCATCCACCTAACTGGCTGACG...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS-3UTR TCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGACAGAATCACGGAGTCTaGACCAAGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGQNHGV*TKGSAG
Trigger: ACCAGCAGAACCCTTGGTTCAGACTCCGTGATTCTG...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGACGGTCTATTCCTGGGTaGCTATTGACGAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGRSIPG*LLTNSD
Trigger: ATCACTGTTCGTCAATAGTCACCCAGGAATAGACCG...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACAAAACCAATTTCCTTTaGCGCCGGGCCCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYKTNFL*RRALES
Trigger: AGATTCAAGGGCCCGGCGTCAAAGGAAATTGGTTTT...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp TTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCTCTGAGAGACAGTATTTaGTGGGGTGGAACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLLQLVTTCICLSARLSSLRDSI*WGGTSP
Trigger: AGGGGAAGTTCCACCCCATCAAATACTGTCTCTCAG...AGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCCCTCCGGCTCAGCTCTaGAGGAGTTGGAGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLPPAQL*RSWSEA
Trigger: CGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGG...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
CDS-3UTR GCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSIVSGL*CPGVRP
Trigger: AGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGAT...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAATCTCCTTCTGCCGGATaGTCTCTTTCGTCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKSPSAG*SLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 4 (lower is better)
Translates to: PSHRLITGLLQWALGGRSGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACAGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 4 (lower is better)
Translates to: QKLREVTSPSSPLASPSTGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CTGCTCCTAATCTGCAGATCATGGAGCCACAGGGATGGTAGTAAAGGGGCCACAGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 4 (lower is better)
Translates to: LLLICRSWSHRDGSKGATGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...TGTGGCCCCTTTACTACCATCCCTGTGGCTCCATGATCTGCAGATTAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAGGAAACTGCAGAGCATaGCAGGCCGGTCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKGNCRA*QAGLFL
Trigger: CAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCC...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTTCCCCAAGTACAGATaGAGGATGCAGGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVFPKYR*RMQVFL
Trigger: AAGAAAGACCTGCATCCTGCATCTGTACTTGGGGAA...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTCCCCAAGTACAGATaGAGGATGCAGGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHFPKYR*RMQVFL
Trigger: AAGAAAGACCTGCATCCTGCATCTGTACTTGGGGAA...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACAGTCACTGTTGGTATCTaGCTTTTTCCGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QKLREVTSPSSPLASPSTVTVGI*LFPSVF
Trigger: GAAGACAGACGGAAAAAGGCAGATACCAACAGTGAC...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS-3UTR CCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCAACCAAGGGTTCTGCTaGTGGCTTCTTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELNQGFC*WLLLPC
Trigger: ACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTT...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACGTCTGTCTTCTTCCTaGAGCAGCCGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKRLSSS*SSRSLL
Trigger: CAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACATGAAACAGGCGGGTaGCCTTCCATCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKHETGG*PSIPCL
Trigger: AAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGACCAGAAGTGCTATCTTaGCTGAAGCTGAATCCCGGC +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGPEVLS*LKLNPG
Trigger: GCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGG...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp GCTGAAGCTGAATCCCGGCTGCAGTTTATTACTGCAGCTGGTAACTACCTGCATGAAGAGGACAGGCCTTaGGCAGTCATGGATTTCACA +
Preference number: 4 (lower is better)
Translates to: AEAESRLQFITAAGNYLHEEDRP*AVMDFT
Trigger: TGTGAAATCCATGACTGCCCAAGGCCTGTCCTCTTC...ATGCAGGTAGTTACCAGCTGCAGTAATAAACTGCAGCCGGGATTCAGCTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACAGAATCACGGAGTCTaGACCAAGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKQNHGV*TKGSAG
Trigger: ACCAGCAGAACCCTTGGTTCAGACTCCGTGATTCTG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp GAACACCTTGAGCGTAGGGGTCTTCAGACTTTGCAGGTTGATGATACCATACTTCAGAATCACGGAGTCTaGACCAAGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EHLERRGLQTLQVDDTILQNHGV*TKGSAG
Trigger: ACCAGCAGAACCCTTGGTTCAGACTCCGTGATTCTG...AAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR TCA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCATTCCTGGGTGACTATTaGCGAACAGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSAFLGDY*RTVMLG
Trigger: TCCCAGCATCACTGTTCGTCAATAGTCACCCAGGAA...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCCGGTCTATTCCTGGGTaGCTATTGACGAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELRSIPG*LLTNSD
Trigger: ATCACTGTTCGTCAATAGTCACCCAGGAATAGACCG...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TCAGCATCCTCTGGTGGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGTGCCTGTTTCTGAAGTaGCGTTTGCCCACTGACATG +
Preference number: 4 (lower is better)
Translates to: SASSGGNVSRDNREPKFLCLFLK*RLPTDM
Trigger: CATGTCAGTGGGCAAACGTCACTTCAGAAACAGGCA...CAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGATGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp GGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGCCACCTGCCTGTTTCTaGAGTGACGTTTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GNVSRDNREPKFLDKIVAPPACF*SDVCPL
Trigger: CAGTGGGCAAACGTCACTTCAGAAACAGGCAGGTGG...CGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAAGCCTGCACACTGTCTaGTTACGCTATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSASLHTV*LRYSHH
Trigger: ATGGTGGCTATAGCGTAATCAGACAGTGTGCAGGCT...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTTGTCGTCTTCTACTCTaGCAGCGACTTTTATTCATT +
Preference number: 4 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRCRLLL*QRLLFI
Trigger: AATGAATAAAAGTCGCTGGCAGAGTAGAAGACGACA...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000555042.5
CDS-3UTR GCA 90 bp TCAGCATCCTCTGGTGGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SASSGGNVSRDNREPKFLLSSGG*SCYVQG
Trigger: TCCCTGGACATAACAACTGCAACCCCCTGACGAAAG...CAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGATGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACTCTCCATCTCCTTCTaGCGGATGCTCTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKLSISF*RMLSFV
Trigger: GACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTACTGAAGCAGTTATTTaGTTGGATATTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRTEAVI*LDIQGP
Trigger: TGGTCCCTGAATATCCAAGCAAATAACTGCTTCAGT...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACATGGCTCTGGGCTGTaGCCTGCAGAATTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKHGSGL*PAELAV
Trigger: TACAGCTAATTCTGCAGGGCACAGCCCAGAGCCATG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACTTCCCCAAGTACAGATaGAGGATGCAGGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYFPKYR*RMQVFL
Trigger: AAGAAAGACCTGCATCCTGCATCTGTACTTGGGGAA...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCAAGCAGTTATTTGCTTaGATATTCAGGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLIKQLFA*IFRDQA
Trigger: TGCCTGGTCCCTGAATATCCAAGCAAATAACTGCTT...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACAAGCAGTTATTTGCTTaGATATTCAGGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHKQLFA*IFRDQA
Trigger: TGCCTGGTCCCTGAATATCCAAGCAAATAACTGCTT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCCCCCGTCCTCTCCGCTaGCTTCCCCAAGTACAGATG +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLPRPLR*LPQVQM
Trigger: CATCTGTACTTGGGGAAGCCAGCGGAGAGGACGGGG...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTTCCTTCCAACGCCTTTaGATAATAACAGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: HRGLKPSHRLITGLLQWASFQRL*IITAES
Trigger: GGATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGA...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCCAGTATTTGATGGGGTaGAACTTCCCCTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELQYLMG*NFPFLP
Trigger: AGGAAGGAAGGGGAAGTTCCACCCCATCAAATACTG...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTGTGCATGTCACACCATaGTTCTTCTCTTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSVHVTP*FFSWFY
Trigger: ATAAAACCAAGAGAAGAATCATGGTGTGACATGCAC...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACGTGCATGTCACACCATaGTTCTTCTCTTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHVHVTP*FFSWFY
Trigger: ATAAAACCAAGAGAAGAATCATGGTGTGACATGCAC...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR TCA 90 bp AGCCACCGCGCCGGGCCGGGGCCAAGAATCTTTACAATGACCATAACTTCTTTTACAATTCTTGAAGACTaGGAACACATTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SHRAGPGPRIFTMTITSFTILED*EHILQC
Trigger: ACACTGCAGAATGTGTTCTCAGTCTTCAAGAATTGT...AAAAGAAGTTATGGTCATTGTAAAGATTCTTGGCCCCGGCCCGGCGCGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAG +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALRRSQL*QTRLTE
Trigger: CTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCT...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKLSSGG*SCYVQG
Trigger: TCCCTGGACATAACAACTGCAACCCCCTGACGAAAG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACACTGAAGCAGTTATTTaGTTGGATATTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHTEAVI*LDIQGP
Trigger: TGGTCCCTGAATATCCAAGCAAATAACTGCTTCAGT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTACTGAAGCAGTTATTTaGTTGGATATTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: PRTQTISPSHHWASSMGSTEAVI*LDIQGP
Trigger: TGGTCCCTGAATATCCAAGCAAATAACTGCTTCAGT...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAGGCCGGTCTATTCCTaGTGGGTGACTATTGACGAA +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKRPVYS*WVTIDE
Trigger: TTCGTCAATAGTCACCCAGCAGGAATAGACCGGCCT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GAACACCTTGAGCGTAGGGGTCTTCAGACTTTGCAGGTTGATGATACCATACTTAGGCCGGTCTATTCCTaGTGGGTGACTATTGACGAA +
Preference number: 4 (lower is better)
Translates to: EHLERRGLQTLQVDDTILRPVYS*WVTIDE
Trigger: TTCGTCAATAGTCACCCAGCAGGAATAGACCGGCCT...AAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAACCAAGGGTTCTGCTaGTGGCTTCTTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKNQGFC*WLLLPC
Trigger: ACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACAAGCAGTTATTTGCTTaGATATTCAGGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYKQLFA*IFRDQA
Trigger: TGCCTGGTCCCTGAATATCCAAGCAAATAACTGCTT...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGGTACGGGGAGGGTATaGTTCTCAGTAGGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSGTGRV*FSVGGH
Trigger: ATGCCCGCCTACTGAGAACCATACCCTCCCCGTACC...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAACGAGAAGGCCACACTaGGAATGTCGGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSTRRPH*ECRPWR
Trigger: CCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGT...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAAATCCACATGGCTCTaGGCTGTGCCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKKSTWL*AVPCRI
Trigger: AATTCTGCAGGGCACAGCCCAGAGCCATGTGGATTT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGATCCTTCCAACGCCTTTaGATAATAACAGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: GLKPSHRLITGLLQWALGSFQRL*IITAES
Trigger: GGATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGA...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACCGGTCTATTCCTGCTaGGTGACTATTGACGAACAG +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKPVYSC*VTIDEQ
Trigger: CTGTTCGTCAATAGTCACCCAGCAGGAATAGACCGG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCAGGCTGTCCACCTGGTaGACATTTATTTACACTCCT +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELRLSTW*TFIYTP
Trigger: AGGAGTGTAAATAAATGTCCACCAGGTGGACAGCCT...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCGATAAGATAGTTGCGTaGTGGAATAATGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELDKIVA*WNNAGL
Trigger: CAGGCCAGCATTATTCCACCACGCAACTATCTTATC...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TCGGCTCACTGCAACCTCCGACTTCCTGGTCCAAGCAATTCTCCTGCTTCTGACCACAAAAATGTTCCATaGGGTATAAGCCCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: SAHCNLRLPGPSNSPASDHKNVP*GISPFY
Trigger: ATAGAAAGGGCTTATACCCCATGGAACATTTTTGTG...GTCAGAAGCAGGAGAATTGCTTGGACCAGGAAGTCGGAGGTTGCAGTGAGCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCTCCCCACAGCTCTTTCTaGTTTAATGCTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLQLVTTCICLSARLSSPHSSF*FNASVP
Trigger: AGGAACTGAAGCATTAAACCAGAAAGAGCTGTGGGG...AGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp CTGCAGTGTCAGCAGCTACTATTTCAGTGTGAAAGCATTGAGCCTGCACACTGTATTACATCCTGGGGATaGGCTAGGTTGACAACTCTC +
Preference number: 4 (lower is better)
Translates to: LQCQQLLFQCESIEPAHCITSWG*ARLTTL
Trigger: GAGAGTTGTCAACCTAGCCCATCCCCAGGATGTAAT...ACAGTGTGCAGGCTCAATGCTTTCACACTGAAATAGTAGCTGCTGACACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCTATAGCTACCACACCTaGCCTGATCTTTTCATGTTA +
Preference number: 4 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSYSYHT*PDLFML
Trigger: TAACATGAAAAGATCAGGCCAGGTGTGGTAGCTATA...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCTCTCTGCGAGTCCCATaGGGCATAGCAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLSLRVP*GIAECG
Trigger: CCCACATTCTGCTATGCCTCATGGGACTCGCAGAGA...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAAAACCAATTTCCTTTaGCGCCGGGCCCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKKTNFL*RRALES
Trigger: AGATTCAAGGGCCCGGCGTCAAAGGAAATTGGTTTT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAGCAGCCCAAGCTCATaGTCTCCTAAGTCATTCACA +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKSSPSS*SPKSFT
Trigger: TGTGAATGACTTAGGAGATCATGAGCTTGGGCTGCT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR GCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCATCTCCTTCTGCCGGATaGTCTCTTTCGTCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSSPSAG*SLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCTCTCCTTCTGCCGGATaGTCTCTTTCGTCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLSPSAG*SLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCGGAAACTGCAGAGCATaGCAGGCCGGTCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLGNCRA*QAGLFL
Trigger: CAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCC...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAGTCATTCACAGAAGTaGATGTCACACCATGATTCT +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRSHSQK*MSHHDS
Trigger: AGAATCATGGTGTGACATGCACTTCTGTGAATGACT...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCAGTTGGAGCGAAGCGTaGAAGGACCCGGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLSWSEA*KDPERP
Trigger: TGGTCTTTCCGGGTCCTTGCACGCTTCGCTCCAACT...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509320.5
CDS-3UTR GCA 90 bp TTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCTACTGAGAACACATTCTaGAGTGTCAGCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: LLLQLVTTCICLSARLSSTENTF*SVSSYY
Trigger: ATAGTAGCTGCTGACACTGCAGAATGTGTTCTCAGT...AGAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCACGTCTGTCTTCTTCCTaGAGCAGCCGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSRLSSS*SSRSLL
Trigger: CAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACG...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp GGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGAGGCCGGTCTATTCCTaGGTGACTATTGACGAACAG +
Preference number: 4 (lower is better)
Translates to: GNVSRDNREPKFLDKIVARPVYS*VTIDEQ
Trigger: CTGTTCGTCAATAGTCACCCAGGAATAGACCGGCCT...CGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CCA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGAAAGATAGTTGCGTGGTaGAATAATGCTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGKIVAW*NNAGLM
Trigger: CATCAGGCCAGCATTATTCCACCACGCAACTATCTT...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CAA 72 bp GATCACTTGTGTGGCTCTAAGACCAGAAGTGCTATCTaGGCTGAAGCTGAATCCCGGCTGCAGTTTATTACT +
Preference number: 4 (lower is better)
Translates to: DHLCGSKTRSAI*AEAESRLQFIT
Trigger: AGTAATAAACTGCAGCCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGGTCTTAGAGCCACACAAGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CAA 72 bp TCTGTCAAAGTCATTACATCCTGGGGATGGGCTAGGTaGACAACTCTCCCCACAGCTCTTTCTGGTTTAATG +
Preference number: 4 (lower is better)
Translates to: SVKVITSWGWAR*TTLPTALSGLM
Trigger: CATTAAACCAGAAAGAGCTGTGGGGAGAGTTGTCAACCTAGCCCATCCCCAGGATGTAATGACTTTGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR TCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTTCTCTGCGAGTCCCATaGGGCATAGCAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALSLRVP*GIAECG
Trigger: CCCACATTCTGCTATGCCTCATGGGACTCGCAGAGA...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAATCTATTCCTGCTGGGTaGCTATTGACGAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKSIPAG*LLTNSD
Trigger: ATCACTGTTCGTCAATAGTCACCCAGCAGGAATAGA...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR TCA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCAGAGGTGACAATTCTTaGAGACTGAGAACACATTCT +
Preference number: 4 (lower is better)
Translates to: FITAAGNYLHLPLSKAELRGDNS*RLRTHS
Trigger: AGAATGTGTTCTCAGTCTTCAAGAATTGTCACCTCT...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCCTGAACCAAGGGTTCTaGTGGTGGCTTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLLNQGF*WWLLLP
Trigger: TGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAG...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp GAACACCTTGAGCGTAGGGGTCTTCAGACTTTGCAGGTTGATGATACCATACTTGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 4 (lower is better)
Translates to: EHLERRGLQTLQVDDTILGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...AAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR GCA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 4 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDNTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 4 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHNTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAGTACAGATGCAGGATaGAGGTCTTTCTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKSTDAG*RSFFLL
Trigger: TAGCAGGAAGAAAGACCTGCATCCTGCATCTGTACT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAGTCACTGTTGGTATCTaGCTTTTTCCGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKVTVGI*LFPSVF
Trigger: GAAGACAGACGGAAAAAGGCAGATACCAACAGTGAC...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509153.5
CDS-3UTR CCA 90 bp CTGCAGTGTCAGCAGCTACTATTTCAGTGTGAAAGCATTGAGCCTGCACACTGTATGAGGCTGTCCACCTaGTGGACATTTATTTACACT +
Preference number: 4 (lower is better)
Translates to: LQCQQLLFQCESIEPAHCMRLST*WTFIYT
Trigger: AGTGTAAATAAATGTCCACCAGGTGGACAGCCTCAT...ACAGTGTGCAGGCTCAATGCTTTCACACTGAAATAGTAGCTGCTGACACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
3UTR CAA 72 bp GGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTaGGATAAGATAGTTGCGTGGTGGAATAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GNVSRDNREPKF*DKIVAWWNNAG
Trigger: GCCAGCATTATTCCACCACGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCTCCATCTCCTTCTaGCGGATGCTCTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALLSISF*RMLSFV
Trigger: GACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAG...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp TCAGCATCCTCTGGTGGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGACTGAAGCAGTTATTTaGTTGGATATTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: SASSGGNVSRDNREPKFLTEAVI*LDIQGP
Trigger: TGGTCCCTGAATATCCAAGCAAATAACTGCTTCAGT...CAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCCACCAGAGGATGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 4 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSNTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAACACCCTCATTAGATaGAGTAAAAAGTTACGCTTT +
Preference number: 4 (lower is better)
Translates to: TQTISPSHHWASSMGSWRNTLIR*SKKLRF
Trigger: AAAGCGTAACTTTTTACTGCATCTAATGAGGGTGTT...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCACTGGGCTTCTTCAATaGGCTCTTGGAGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLTGLLQ*ALGGRS
Trigger: GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGT...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAAGAGCCGGTCACTGTTaGTATCTGCCTTTTTCCGTC +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSRAGHC*YLPFSV
Trigger: GACGGAAAAAGGCAGATACCAACAGTGACCGGCTCT...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS-3UTR CCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAGAGCCGGTCACTGTTaGTATCAGTATGAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKRAGHC*YQYEVK
Trigger: TTTAACCTCATACTGATACCAACAGTGACCGGCTCT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509320.5
3UTR CAA 72 bp GGCAGTCATGGATTTCACATTTGTGATTCTGATCACTaGTGTGGCTCTAAGACCAGAAGTGCTATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSHGFHICDSDH*CGSKTRSAILA
Trigger: AGCCAAGATAGCACTTCTGGTCTTAGAGCCACACAAGTGATCAGAATCACAAATGTGAAATCCATGACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAGTCATTCACAGAAGTaGATGTCACACCATGATTCT +
Preference number: 4 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKSHSQK*MSHHDS
Trigger: AGAATCATGGTGTGACATGCACTTCTGTGAATGACT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358377.7
ENST00000394234.6
CDS-3UTR CCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTTCACCGTCTCATCACTaGGCTTCTTCAATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALSPSHH*ASSMGS
Trigger: AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGA...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp GGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGCATGATATACACTACTaGAGACCTTCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GNVSRDNREPKFLDKIVAHDIHY*RPSAGE
Trigger: TTCTCCTGCTGAAGGTCTCCAGTAGTGTATATCATG...CGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCAGTACAGATGCAGGATaGAGGTCTTTCTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLSTDAG*RSFFLL
Trigger: TAGCAGGAAGAAAGACCTGCATCCTGCATCTGTACT...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR TCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTTCTATTCCTGCTGGGTaGCTATTGACGAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALSIPAG*LLTNSD
Trigger: ATCACTGTTCGTCAATAGTCACCCAGCAGGAATAGA...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509320.5
ENST00000555042.5
CDS-3UTR GCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTGGGGTCTTCAGACTTTaGAGGTTGATGATACCATAC +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALGVFRL*RLMIPY
Trigger: GTATGGTATCATCAACCTGCAAAGTCTGAAGACCCC...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCTCCTTCCAACGCCTTTaGATAATAACAGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLSFQRL*IITAES
Trigger: GGATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGA...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CCA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCATCCTTCCAACGCCTTTaGATAATAACAGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSSFQRL*IITAES
Trigger: GGATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGA...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR GCA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCACTGAAGCAGTTATTTaGTTGGATATTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLTEAVI*LDIQGP
Trigger: TGGTCCCTGAATATCCAAGCAAATAACTGCTTCAGT...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CCA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTAAGCAGTTATTTGCTTaGATATTCAGGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALKQLFA*IFRDQA
Trigger: TGCCTGGTCCCTGAATATCCAAGCAAATAACTGCTT...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS TCA 90 bp CCAGACGAGGTTGACGGAGACTCGTCATCACCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGGGAGTCAGACCTGTTCAGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: PDEVDGDSSSPWPES*AGCAARESDLFSVS
Trigger: GGACACGCTGAACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394234.6
CDS TCA 90 bp GAGGGCTGTGCCCCAGGAAGCTGCCTCAAATGCAGGTTCTTCACTTaGGCATGTACAGTGGGGGCAGGAGACGCAGCGCTGGGCGCTCAG +
Preference number: 5 (lower is better)
Translates to: EGCAPGSCLKCRFFT*ACTVGAGDAALGAQ
Trigger: CTGAGCGCCCAGCGCTGCGTCTCCTGCCCCCACTGTACATGCTCAAGTGAAGAACCTGCATTTGAGGCAGCTTCCTGGGGCACAGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS CCA 90 bp AGCGTGTCCCTTCCGGATTCCCCTCCGGCTCAGCTCTGCAGGAGTTaGAGCGAAGCGTGCAAGGACCCGGAAAGACCAAGGTGTAGCGTC +
Preference number: 5 (lower is better)
Translates to: SVSLPDSPPAQLCRS*SEACKDPERPRCSV
Trigger: GACGCTACACCTTGGTCTTTCCGGGTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGGGGAATCCGGAAGGGACACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS TCA 90 bp CCAGACGAGGTTGACGGAGACTCGTCATCACCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGGGAGTCAGACCTGTCTTCAGAATCA +
Preference number: 5 (lower is better)
Translates to: PDEVDGDSSSPWPES*AGCAARESDLSSES
Trigger: TGATTCTGAAGACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000509320.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS GCA 90 bp CCGGATTCCCCTCCGGCTCAGCTCTGCAGGAGTTGGAGCGAAGCGTaGAAGGACCCGGAAAGACCAAGGTGTAGCGTCAGCCAGTTAGGT +
Preference number: 5 (lower is better)
Translates to: PDSPPAQLCRSWSEA*KDPERPRCSVSQLG
Trigger: ACCTAACTGGCTGACGCTACACCTTGGTCTTTCCGGGTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGGGGAATCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS GCA 90 bp TTCCTGTTCAGCGTGTCCCTTCCGGATTCCCCTCCGGCTCAGCTCTaGAGGAGTTGGAGCGAAGCGTGCAAGGACCCGGAAAGACCAAGG +
Preference number: 5 (lower is better)
Translates to: FLFSVSLPDSPPAQL*RSWSEACKDPERPR
Trigger: CCTTGGTCTTTCCGGGTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGGGGAATCCGGAAGGGACACGCTGAACAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509320.5
CDS GCA 90 bp GAGCAAGCGGAAGTAGCGTTTCTGGCACAGAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAGACTCGTCATCACCGTGGCCGGAAT +
Preference number: 5 (lower is better)
Translates to: EQAEVAFLAQRRSQL*QTRLTETRHHRGRN
Trigger: ATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAAACGCTACTTCCGCTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS GCA 90 bp GAAGCTGACATCCATGAAGAAGATTCGGGGGTCTCTGGCCTTCCCTaGCCCGCTGACGCCCATCTCTCCTCGTCAGCCTGCTCCACAGTA +
Preference number: 5 (lower is better)
Translates to: EADIHEEDSGVSGLP*PADAHLSSSACSTV
Trigger: TACTGTGGAGCAGGCTGACGAGGAGAGATGGGCGTCAGCGGGGCAGGGAAGGCCAGAGACCCCCGAATCTTCTTCATGGATGTCAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557203.1
CDS GCA 90 bp CAAAGTAAAACCCAGGTAGCTCTGGCACAGAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAGACTCGTCATCACCGTGGCCGGAAT +
Preference number: 5 (lower is better)
Translates to: QSKTQVALAQRRSQL*QTRLTETRHHRGRN
Trigger: ATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAGCTACCTGGGTTTTACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS CCA 90 bp AGCTTTCTCAGGGTGGGTTTAAGCAGCAGAAGGCAGGGTGTGAACTaGAGCCCCTCAACTGTGCAGGTGCTTCACGGGGTAGCCACATGG +
Preference number: 5 (lower is better)
Translates to: SFLRVGLSSRRQGVN*SPSTVQVLHGVATW
Trigger: CCATGTGGCTACCCCGTGAAGCACCTGCACAGTTGAGGGGCTCCAGTTCACACCCTGCCTTCTGCTGCTTAAACCCACCCTGAGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS-3UTR CAA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAAAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: VAQPGVSASPMRHSRMWESSRSL*LSISFC
Trigger: GCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCT...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS GCA 90 bp CTGCCTTTTTCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: LPFSVCLLPGAAAVS*SPSPSAGCSLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAAAAAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509153.5
CDS GCA 90 bp CCACCTTTTTCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTTaGTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: PPFSVCLLPGAAAVS*SPSPSAGCSLSSGG
Trigger: ACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAAAAAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514191.5
CDS-3UTR CAA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRSSRSL*LSISFC
Trigger: GCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCT...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS GCA 90 bp TGCTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGAGCAAGCGGAAGTAGCGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: CSPSPSAGCSLSSGG*SCYVQGASGSSVSG
Trigger: GCCAGAAACGCTACTTCCGCTTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CAA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTTCAGCTCTGCAGGAGTaGGAGCGAAGCGTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: HRGLKPSHRLITGLLQWASALQE*ERSVQG
Trigger: TCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGA...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000358377.7
CDS-3UTR CAA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTCTGTGCCAGACGAGGTaGACGGAGACTCGTCATCAC +
Preference number: 5 (lower is better)
Translates to: PRTQTISPSHHWASSMGSLCQTR*TETRHH
Trigger: GTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAG...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVSSRSL*LSISFC
Trigger: GCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCT...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAACAGGTATTGCTCATCTaGGAGGATCCGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: VAQPGVSASPMRHSRMWEQVLLI*EDPHRG
Trigger: ACCTCTGTGCGGATCCTCCAAGATGAGCAATACCTG...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CAA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCTGGGGATGGGCTAGGTaGACAACTCTCCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSWGWAR*TTLPTA
Trigger: AGCTGTGGGGAGAGTTGTCAACCTAGCCCATCCCCA...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTTCAGCTCTGCAGGAGTaGGAGCGAAGCGTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSSALQE*ERSVQG
Trigger: TCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGA...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
CDS-3UTR CAA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGACTGTGCCAGACGAGGTaGACGGAGACTCGTCATCAC +
Preference number: 5 (lower is better)
Translates to: GLKPSHRLITGLLQWALGLCQTR*TETRHH
Trigger: GTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAG...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACAGTCAGGGGGTTGCAGTaGTTATGTCCAGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: QKLREVTSPSSPLASPSTVRGLQ*LCPGSK
Trigger: CTTGCTCCCTGGACATAACAACTGCAACCCCCTGAC...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACGTCAGGGGGTTGCAGTaGTTATGTCCAGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHVRGLQ*LCPGSK
Trigger: CTTGCTCCCTGGACATAACAACTGCAACCCCCTGAC...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTAAGAGCCGGTCACTGTaGGTATCTGCCAGTATGAGG +
Preference number: 5 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRKSRSL*VSASMR
Trigger: CCTCATACTGGCAGATACCAACAGTGACCGGCTCTT...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCCCTCTGCTGCTGAAGTaGCTGGGATCGCCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: FITAAGNYLHLPLSKAELPLLLK*LGSPLR
Trigger: TCTCAGGGGCGATCCCAGCAACTTCAGCAGCAGAGG...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS TCA 90 bp TGCATGACTGTTTGTTCATACTCCCATCTCATACTGGACGTGAGGTaGATTCTGAACATTCACAGGGGACACCGCCCCAAGGCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: CMTVCSYSHLILDVR*ILNIHRGHRPKARS
Trigger: GCTGCGGGCCTTGGGGCGGTGTCCCCTGTGAATGTTCAGAATTCACCTCACGTCCAGTATGAGATGGGAGTATGAACAAACAGTCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510612.5
CDS GCA 90 bp GGAAATGGGGGAAAGTATCGGCGAGTAACAGAGAATAGACATCTCTaGCTACGTCCCCATCCTCTCTCCCTATCCTCCTGCAAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: GNGGKYRRVTENRHL*LRPHPLSLSSCKSP
Trigger: GGGACTCTTGCAGGAGGATAGGGAGAGAGGATGGGGACGTAGGCAGAGATGTCTATTCTCTGTTACTCGCCGATACTTTCCCCCATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS-3UTR CAA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGTCAGGGGGTTGCAGTaGTTATGTCCAGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GLKPSHRLITGLLQWALGVRGLQ*LCPGSK
Trigger: CTTGCTCCCTGGACATAACAACTGCAACCCCCTGAC...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTCTTTCGTCAGGGGGTaGCAGTTGTTATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHSFVRG*QLLCPG
Trigger: CCCTGGACATAACAACTGCAACCCCCTGACGAAAGA...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp CCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTCTTTCGTCAGGGGGTaGCAGTTGTTATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PRTQTISPSHHWASSMGSSFVRG*QLLCPG
Trigger: CCCTGGACATAACAACTGCAACCCCCTGACGAAAGA...AGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATTCTTTCGTCAGGGGGTaGCAGTTGTTATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDSFVRG*QLLCPG
Trigger: CCCTGGACATAACAACTGCAACCCCCTGACGAAAGA...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FITAAGNYLHLPLSKAELSSRSL*LSISFC
Trigger: GCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCT...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTTCGTGCATGAACACCTaGAGCGTAGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: HRGLKPSHRLITGLLQWASCMNT*SVGVFR
Trigger: TCTGAAGACCCCTACGCTCAAGGTGTTCATGCACGA...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTCGTGCATGAACACCTaGAGCGTAGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHSCMNT*SVGVFR
Trigger: TCTGAAGACCCCTACGCTCAAGGTGTTCATGCACGA...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCTCGTGCATGAACACCTaGAGCGTAGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PSHRLITGLLQWALGGRSSCMNT*SVGVFR
Trigger: TCTGAAGACCCCTACGCTCAAGGTGTTCATGCACGA...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp GTGGCACAGCCTGGAGTCTCTGCGAGTCCCATGAGGCATAGCAGAATGTGGGAAGAAGCAGTTATTTGCTaGGATATTCAGGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: VAQPGVSASPMRHSRMWEEAVIC*DIQGPG
Trigger: GCCTGGTCCCTGAATATCCAAGCAAATAACTGCTTC...TTCCCACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS-3UTR CAA 90 bp CAGAAACTTAGAGAAGTAACCTCCCCGTCCTCTCCGCTGGCTTCCCCAAGTACACAGGTATTGCTCATCTaGGAGGATCCGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: QKLREVTSPSSPLASPSTQVLLI*EDPHRG
Trigger: ACCTCTGTGCGGATCCTCCAAGATGAGCAATACCTG...TGTACTTGGGGAAGCCAGCGGAGAGGACGGGGAGGTTACTTCTCTAAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp TCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTCTCATCCAGGTATTGCTCATCTaGGAGGATCCGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: SFFLLPRHRGLKPSHRLIQVLLI*EDPHRG
Trigger: ACCTCTGTGCGGATCCTCCAAGATGAGCAATACCTG...GATGAGACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCCAGGTATTGCTCATCTaGGAGGATCCGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSQVLLI*EDPHRG
Trigger: ACCTCTGTGCGGATCCTCCAAGATGAGCAATACCTG...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCCCTGAGAGACAGTATTaGATGGGGTGGAACTTCCCC +
Preference number: 5 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSPERQY*MGWNFP
Trigger: GGGGAAGTTCCACCCCATCAAATACTGTCTCTCAGG...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp CTGCTCCTAATCTGCAGATCATGGAGCCACAGGGATGGTAGTAAAGGGGCCACAACCAGAAGTGCTATCTaGGCTGAAGCTGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: LLLICRSWSHRDGSKGATTRSAI*AEAESR
Trigger: CCGGGATTCAGCTTCAGCCAAGATAGCACTTCTGGT...TGTGGCCCCTTTACTACCATCCCTGTGGCTCCATGATCTGCAGATTAGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS GCA 90 bp TGCTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGAGCAAGCGGAAGTAGCGTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: CSPSPSAGCSLSSGG*SCYVQGASGSSVSF
Trigger: AAAAGAAACGCTACTTCCGCTTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS-3UTR CAA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTTCTTTCGTCAGGGGGTaGCAGTTGTTATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSSFVRG*QLLCPG
Trigger: CCCTGGACATAACAACTGCAACCCCCTGACGAAAGA...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCAGGGGTCTTCAGACTTaGCAGGTTGATGATACCATA +
Preference number: 5 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPRGLQT*QVDDTI
Trigger: TATGGTATCATCAACCTGCAAAGTCTGAAGACCCCT...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGATCGTGCATGAACACCTaGAGCGTAGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GLKPSHRLITGLLQWALGSCMNT*SVGVFR
Trigger: TCTGAAGACCCCTACGCTCAAGGTGTTCATGCACGA...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACTCGTGCATGAACACCTaGAGCGTAGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYSCMNT*SVGVFR
Trigger: TCTGAAGACCCCTACGCTCAAGGTGTTCATGCACGA...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGACAGGTATTGCTCATCTaGGAGGATCCGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: GLKPSHRLITGLLQWALGQVLLI*EDPHRG
Trigger: ACCTCTGTGCGGATCCTCCAAGATGAGCAATACCTG...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp AGCCACCGCGCCGGGCCGGGGCCAAGAATCTTTACAATGACCATAACTTCTTTTCTGTCCACACTCCCCTaGATTCAGTTCTGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: SHRAGPGPRIFTMTITSFLSTLP*IQFCFG
Trigger: CCCAAAACAGAACTGAATCAAGGGGAGTGTGGACAG...AAAAGAAGTTATGGTCATTGTAAAGATTCTTGGCCCCGGCCCGGCGCGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACTGTGCCAGACGAGGTaGACGGAGACTCGTCATCAC +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKLCQTR*TETRHH
Trigger: GTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp GCATGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGTCAGGGGGTTGCAGTaGTTATGTCCAGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: AWVTAAQKHDIHYWRPSAVRGLQ*LCPGSK
Trigger: CTTGCTCCCTGGACATAACAACTGCAACCCCCTGAC...TGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKSSRSL*LSISFC
Trigger: GCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TGCAGGTCTTTCTTCCTGCTACCCAGGCACCGAGGACTCAAACCATCTCACCGTAGGGGTCTTCAGACTTaGCAGGTTGATGATACCATA +
Preference number: 5 (lower is better)
Translates to: CRSFFLLPRHRGLKPSHRRGLQT*QVDDTI
Trigger: TATGGTATCATCAACCTGCAAAGTCTGAAGACCCCT...ACGGTGAGATGGTTTGAGTCCTCGGTGCCTGGGTAGCAGGAAGAAAGACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATGAAGCAGTTATTTGCTaGGATATTCAGGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDEAVIC*DIQGPG
Trigger: GCCTGGTCCCTGAATATCCAAGCAAATAACTGCTTC...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACGAAGCAGTTATTTGCTaGGATATTCAGGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHEAVIC*DIQGPG
Trigger: GCCTGGTCCCTGAATATCCAAGCAAATAACTGCTTC...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAGTCAGGGGGTTGCAGTaGTTATGTCCAGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKVRGLQ*LCPGSK
Trigger: CTTGCTCCCTGGACATAACAACTGCAACCCCCTGAC...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp CTGCAGTGTCAGCAGCTACTATTTCAGTGTGAAAGCATTGAGCCTGCACACTGTTCTTTCGTCAGGGGGTaGCAGTTGTTATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LQCQQLLFQCESIEPAHCSFVRG*QLLCPG
Trigger: CCCTGGACATAACAACTGCAACCCCCTGACGAAAGA...ACAGTGTGCAGGCTCAATGCTTTCACACTGAAATAGTAGCTGCTGACACTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGAAAGAGCCGGTCACTGTaGGTATCTGCCAGTATGAGG +
Preference number: 5 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGKSRSL*VSASMR
Trigger: CCTCATACTGGCAGATACCAACAGTGACCGGCTCTT...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp CAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCAGCCCTTGATGATACCATACTaGGAGCCTCCAACTTTAACA +
Preference number: 5 (lower is better)
Translates to: QGSSSEDCDTQQHGLQQPLMIPY*EPPTLT
Trigger: TGTTAAAGTTGGAGGCTCCAAGTATGGTATCATCAA...GGGCTGCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp CAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACAGGGGTCTTCAGACTTaGCAGGTTGATGATACCATA +
Preference number: 5 (lower is better)
Translates to: QHFSPSSQRMGSVYTECHRGLQT*QVDDTI
Trigger: TATGGTATCATCAACCTGCAAAGTCTGAAGACCCCT...GTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGAGGGGTCTTCAGACTTaGCAGGTTGATGATACCATA +
Preference number: 5 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVRGLQT*QVDDTI
Trigger: TATGGTATCATCAACCTGCAAAGTCTGAAGACCCCT...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATAGGGGTCTTCAGACTTaGCAGGTTGATGATACCATA +
Preference number: 5 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDRGLQT*QVDDTI
Trigger: TATGGTATCATCAACCTGCAAAGTCTGAAGACCCCT...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGATCGTGCATGAACACCTaGAGCGTAGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGSCMNT*SVGVFR
Trigger: TCTGAAGACCCCTACGCTCAAGGTGTTCATGCACGA...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp ATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGAAGCAGTTATTTGCTaGGATATTCAGGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: ISTRNIQHFSPSSQRMGSEAVIC*DIQGPG
Trigger: GCCTGGTCCCTGAATATCCAAGCAAATAACTGCTTC...AGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp GTCTTCAGGGCTCCAGTTCTGAGGACTGTGACACACAACAGCATGGGTTACAGCTTCAGACTTTGCAGGTaGATGATACCATACTTGGAG +
Preference number: 5 (lower is better)
Translates to: VFRAPVLRTVTHNSMGYSFRLCR*MIPYLE
Trigger: CTCCAAGTATGGTATCATCAACCTGCAAAGTCTGAA...GCTGTAACCCATGCTGTTGTGTGTCACAGTCCTCAGAACTGGAGCCCTGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACAGGGGTCTTCAGACTTaGCAGGTTGATGATACCATA +
Preference number: 5 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYRGLQT*QVDDTI
Trigger: TATGGTATCATCAACCTGCAAAGTCTGAAGACCCCT...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAACAGGTATTGCTCATCTaGGAGGATCCGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKQVLLI*EDPHRG
Trigger: ACCTCTGTGCGGATCCTCCAAGATGAGCAATACCTG...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp CACCGAGGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTTTCCTTCCAACGCCTTaGGATAATAACAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: HRGLKPSHRLITGLLQWAFLPTP*DNNSRI
Trigger: GATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGAA...AGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCCTCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp GCATCTCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATTTCCTTCCAACGCCTTaGGATAATAACAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: ASPHGTFSTSLLAARGWDFLPTP*DNNSRI
Trigger: GATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGAA...ATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp CCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGAAGAAGCTTGATGATACCATACTaGGAGCCTCCAACTTTAACA +
Preference number: 5 (lower is better)
Translates to: PSHRLITGLLQWALGGRSLMIPY*EPPTLT
Trigger: TGTTAAAGTTGGAGGCTCCAAGTATGGTATCATCAA...GCTTCTTCCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp TCCACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTTGATGATACCATACTaGGAGCCTCCAACTTTAACA +
Preference number: 5 (lower is better)
Translates to: STRNIQHFSPSSQRMGSVLMIPY*EPPTLT
Trigger: TGTTAAAGTTGGAGGCTCCAAGTATGGTATCATCAA...CACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp ACACGGAACATTCAGCACTTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACTTCAGACTTTGCAGGTaGATGATACCATACTTGGAG +
Preference number: 5 (lower is better)
Translates to: TRNIQHFSPSSQRMGSVYFRLCR*MIPYLE
Trigger: CTCCAAGTATGGTATCATCAACCTGCAAAGTCTGAA...GTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAAGTGCTGAATGTTCCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGAGAAGCAGTTATTTGCTaGGATATTCAGGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGEAVIC*DIQGPG
Trigger: GCCTGGTCCCTGAATATCCAAGCAAATAACTGCTTC...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAAAAGAGCCGGTCACTGTaGGTATCTGCCTTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKKSRSL*VSAFFR
Trigger: ACGGAAAAAGGCAGATACCAACAGTGACCGGCTCTT...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509153.5
CDS-3UTR CAA 90 bp TGGGTTACAGCAGCCCAGAAACATGATATACACTACTGGAGACCTTCAGCAGGAAGGGAGCCCAAGTTTTaGGATAAGATAGTTGCGTGG +
Preference number: 5 (lower is better)
Translates to: WVTAAQKHDIHYWRPSAGREPKF*DKIVAW
Trigger: CCACGCAACTATCTTATCCAAAAACTTGGGCTCCCT...TCCTGCTGAAGGTCTCCAGTAGTGTATATCATGTTTCTGGGCTGCTGTAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCGTCAGGGGGTTGCAGTaGTTATGTCCAGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLVRGLQ*LCPGSK
Trigger: CTTGCTCCCTGGACATAACAACTGCAACCCCCTGAC...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TTTATTACTGCAGCTGGTAACTACCTGCATCTGCCTCTCAGCAAGGCTGAGCTCGGCGAAGTCCTGGTGTaGATGAGAATAGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: FITAAGNYLHLPLSKAELGEVLV*MRIVNK
Trigger: CTTATTTACTATTCTCATCAACACCAGGACTTCGCC...GAGCTCAGCCTTGCTGAGAGGCAGATGCAGGTAGTTACCAGCTGCAGTAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCAAGAGCCGGTCACTGTaGGTATCTGCCAGTATGAGG +
Preference number: 5 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLKSRSL*VSASMR
Trigger: CCTCATACTGGCAGATACCAACAGTGACCGGCTCTT...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCTCGTGCATGAACACCTaGAGCGTAGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLSCMNT*SVGVFR
Trigger: TCTGAAGACCCCTACGCTCAAGGTGTTCATGCACGA...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp GGACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGACTTCTCTTGGTTTTATaGTTTGGTAGAAAAACAGGC +
Preference number: 5 (lower is better)
Translates to: GLKPSHRLITGLLQWALGLLLVL*FGRKTG
Trigger: GCCTGTTTTTCTACCAAACAATAAAACCAAGAGAAG...TCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp ACTCAAACCATCTCACCGTCTCATCACTGGGCTTCTTCAATGGGCTCTTGGAGGCTTCTCTTGGTTTTATaGTTTGGTAGAAAAACAGGC +
Preference number: 5 (lower is better)
Translates to: TQTISPSHHWASSMGSWRLLLVL*FGRKTG
Trigger: GCCTGTTTTTCTACCAAACAATAAAACCAAGAGAAG...CCTCCAAGAGCCCATTGAAGAAGCCCAGTGATGAGACGGTGAGATGGTTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTAAGAGCCGGTCACTGTaGGTATCTGCCAGTATGAGG +
Preference number: 5 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALKSRSL*VSASMR
Trigger: CCTCATACTGGCAGATACCAACAGTGACCGGCTCTT...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAATTCAGACTTTGCAGGTaGATGATACCATACTTGGAG +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKFRLCR*MIPYLE
Trigger: CTCCAAGTATGGTATCATCAACCTGCAAAGTCTGAA...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAATTCCTTCCAACGCCTTaGGATAATAACAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKFLPTP*DNNSRI
Trigger: GATTCTGCTGTTATTATCCAAAGGCGTTGGAAGGAA...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS-3UTR CAA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAAAGAGCCGGTCACTGTaGGTATCTGCCTTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSKSRSL*VSAFFR
Trigger: ACGGAAAAAGGCAGATACCAACAGTGACCGGCTCTT...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS-3UTR CAA 90 bp GGAAATGTGAGTAGAGACAACAGGGAGCCCAAGTTTTTGGATAAGATAGTTGCGTGTGATTCTGATCACTaGTGTGGCTCTAAGACCAGA +
Preference number: 5 (lower is better)
Translates to: GNVSRDNREPKFLDKIVACDSDH*CGSKTR
Trigger: TCTGGTCTTAGAGCCACACAAGTGATCAGAATCACA...CGCAACTATCTTATCCAAAAACTTGGGCTCCCTGTTGTCTCTACTCACATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553457.1
CDS-3UTR CAA 90 bp TTCTCTCCTAGCAGCCAGAGGATGGGATCTGTGTACACTGAGTGTCACTTAAAATTGATGATACCATACTaGGAGCCTCCAACTTTAACA +
Preference number: 5 (lower is better)
Translates to: FSPSSQRMGSVYTECHLKLMIPY*EPPTLT
Trigger: TGTTAAAGTTGGAGGCTCCAAGTATGGTATCATCAA...TTTTAAGTGACACTCAGTGTACACAGATCCCATCCTCTGGCTGCTAGGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509153.5
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCTTGATGATACCATACTaGGAGCCTCCAACTTTAACA +
Preference number: 5 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLLMIPY*EPPTLT
Trigger: TGTTAAAGTTGGAGGCTCCAAGTATGGTATCATCAA...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp AGCCAGCAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCATTGATGATACCATACTaGGAGCCTCCAACTTTAACA +
Preference number: 5 (lower is better)
Translates to: SQQFNSNNFPEHLHTEHSLMIPY*EPPTLT
Trigger: TGTTAAAGTTGGAGGCTCCAAGTATGGTATCATCAA...TGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTGCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp CAATTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTTTGATGATACCATACTaGGAGCCTCCAACTTTAACA +
Preference number: 5 (lower is better)
Translates to: QFNSNNFPEHLHTEHSALLMIPY*EPPTLT
Trigger: TGTTAAAGTTGGAGGCTCCAAGTATGGTATCATCAA...AAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000509320.5
ENST00000555042.5
CDS-3UTR CAA 90 bp TTTAACTCAAATAACTTTCCTGAGCATCTCCACACGGAACATTCAGCACTTCTCCTTCTCTTGGTTTTATaGTTTGGTAGAAAAACAGGC +
Preference number: 5 (lower is better)
Translates to: FNSNNFPEHLHTEHSALLLLLVL*FGRKTG
Trigger: GCCTGTTTTTCTACCAAACAATAAAACCAAGAGAAG...GAGAAGTGCTGAATGTTCCGTGTGGAGATGCTCAGGAAAGTTATTTGAGTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358377.7
ENST00000394234.6
ENST00000555042.5
CDS TCA 72 bp CGCAGCTCGTGGGCTAAAGGTGTTTCTGGCCTTCCCTaGAGGGGCCCTGCTCCAAGGTCCGAGGGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: RSSWAKGVSGLP*RGPAPRSEGCA
Trigger: GGCACAGCCCTCGGACCTTGGAGCAGGGCCCCTTCAGGGAAGGCCAGAAACACCTTTAGCCCACGAGCTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS GCA 72 bp CTCGTCATCACCGTGGCCGGAATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCTGTTCAGCGTGTCCCT +
Preference number: 6 (lower is better)
Translates to: LVITVAGIVSGL*CPGVRPVQRVP
Trigger: AGGGACACGCTGAACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGGTGATGACGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394234.6
CDS TCA 72 bp GTTGACGGAGACTCGTCATCACCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGGGAGTCAGACCTGTCT +
Preference number: 6 (lower is better)
Translates to: VDGDSSSPWPES*AGCAARESDLS
Trigger: AGACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000509320.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS TCA 72 bp GTTGACGGAGACTCGTCATCACCGTGGCCGGAATCGTaGGCGGGCTGTGCTGCCCGGGAGTCAGACCTGTTC +
Preference number: 6 (lower is better)
Translates to: VDGDSSSPWPES*AGCAARESDLF
Trigger: GAACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394234.6
CDS GCA 72 bp AGCGTGTCCCTTCCGGATTCCCCTCCGGCTCAGCTCTaGAGGAGTTGGAGCGAAGCGTGCAAGGACCCGGAA +
Preference number: 6 (lower is better)
Translates to: SVSLPDSPPAQL*RSWSEACKDPE
Trigger: TTCCGGGTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGGGGAATCCGGAAGGGACACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000509320.5
CDS CAA 90 bp CAGGTAGCTCTGGCACAGAGGAGGTCCCAGCTGTGCCAGACGAGGTaGACGGAGACTCGTCATCACCGTGGCCGGAATCGTGAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: QVALAQRRSQLCQTR*TETRHHRGRNRERA
Trigger: AGCCCGCTCACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAGCTACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS CAA 90 bp CGAGGGCTGTGCCCCAGGAAGCTGCCTCAAATGCAGGTTCTTCACTaGAGCATGTACAGTGGGGGCAGGAGACGCAGCGCTGGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: RGLCPRKLPQMQVLH*SMYSGGRRRSAGRS
Trigger: TGAGCGCCCAGCGCTGCGTCTCCTGCCCCCACTGTACATGCTCAAGTGAAGAACCTGCATTTGAGGCAGCTTCCTGGGGCACAGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS CAA 90 bp GTAGCGTTTCTGGCACAGAGGAGGTCCCAGCTGTGCCAGACGAGGTaGACGGAGACTCGTCATCACCGTGGCCGGAATCGTGAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: VAFLAQRRSQLCQTR*TETRHHRGRNRERA
Trigger: AGCCCGCTCACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAAACGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS TCA 72 bp TGGCACAGAGGAGGTCCCAGCTGTGCCAGACGAGGTTaGCGGAGACTCGTCATCACCGTGGCCGGAATCGTG +
Preference number: 6 (lower is better)
Translates to: WHRGGPSCARRG*RRLVITVAGIV
Trigger: CACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000509320.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS GCA 72 bp GTCATCACCGTGGCCGGAATCGTGAGCGGGCTGTGCTaGCCGGGAGTCAGACCTGTCTTCAGAATCACGGAG +
Preference number: 6 (lower is better)
Translates to: VITVAGIVSGLC*PGVRPVFRITE
Trigger: CTCCGTGATTCTGAAGACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGGTGATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000509320.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS GCA 72 bp CTCGTCATCACCGTGGCCGGAATCGTGAGCGGGCTGTaGTGCCCGGGAGTCAGACCTGTCTTCAGAATCACG +
Preference number: 6 (lower is better)
Translates to: LVITVAGIVSGL*CPGVRPVFRIT
Trigger: CGTGATTCTGAAGACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCGGCCACGGTGATGACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000509320.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS GCA 72 bp CCTCCGGCTCAGCTCTGCAGGAGTTGGAGCGAAGCGTaGAAGGACCCGGAAAGACCAAGGTGTAGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: PPAQLCRSWSEA*KDPERPRCSVS
Trigger: GCTGACGCTACACCTTGGTCTTTCCGGGTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353777.7
CDS GCA 72 bp TCCCTGAAGGGGCCCTGCTCCAAGGTCCGAGGGCTGTaGCCCAGGAAGCTGCCTCAAATGCAGGTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: SLKGPCSKVRGL*PRKLPQMQVLH
Trigger: GTGAAGAACCTGCATTTGAGGCAGCTTCCTGGGGCACAGCCCTCGGACCTTGGAGCAGGGCCCCTTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS CCA 72 bp CTTCCGGATTCCCCTCCGGCTCAGCTCTGCAGGAGTTaGAGCGAAGCGTGCAAGGACCCGGAAAGACCAAGG +
Preference number: 6 (lower is better)
Translates to: LPDSPPAQLCRS*SEACKDPERPR
Trigger: CCTTGGTCTTTCCGGGTCCTTGCACGCTTCGCTCCAACTCCTGCAGAGCTGAGCCGGAGGGGAATCCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509320.5
CDS CCA 72 bp CTTGAGCATGTACAGTGGGGGCAGGAGACGCAGCGCTaGGCGCTCAGGTGTTGGAGTCAGACAGTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: LEHVQWGQETQR*ALRCWSQTVPH
Trigger: GTGGGGAACTGTCTGACTCCAACACCTGAGCGCCCAGCGCTGCGTCTCCTGCCCCCACTGTACATGCTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS CAA 72 bp CTGGCACAGAGGAGGTCCCAGCTGTGCCAGACGAGGTaGACGGAGACTCGTCATCACCGTGGCCGGAATCGT +
Preference number: 6 (lower is better)
Translates to: LAQRRSQLCQTR*TETRHHRGRNR
Trigger: ACGATTCCGGCCACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000509320.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS GCA 72 bp ACCCAGGTAGCTCTGGCACAGAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAGACTCGTCATCACCGT +
Preference number: 6 (lower is better)
Translates to: TQVALAQRRSQL*QTRLTETRHHR
Trigger: ACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAGCTACCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000510612.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS GCA 72 bp CCCTGCCCCGCTGACGCCCATCTCTCCTCGTCAGCCTaGTCCACAGTACTTCTCAGCAATGGAGCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: PCPADAHLSSSA*STVLLSNGAEQ
Trigger: TTGCTCAGCTCCATTGCTGAGAAGTACTGTGGAGCAGGCTGACGAGGAGAGATGGGCGTCAGCGGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557203.1
CDS TCA 72 bp GCCCCAGGAAGCTGCCTCAAATGCAGGTTCTTCACTTaGGCATGTACAGTGGGGGCAGGAGACGCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: APGSCLKCRFFT*ACTVGAGDAAL
Trigger: CAGCGCTGCGTCTCCTGCCCCCACTGTACATGCTCAAGTGAAGAACCTGCATTTGAGGCAGCTTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS CAA 90 bp CCCACCTTTTTCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: PTFFRLSSSWSSRSL*LSISFCRMLSFVRG
Trigger: CCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAAAAAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514191.5
CDS GCA 72 bp GAAGTAGCGTTTCTGGCACAGAGGAGGTCCCAGCTGTaGCAGACGAGGTTGACGGAGACTCGTCATCACCGT +
Preference number: 6 (lower is better)
Translates to: EVAFLAQRRSQL*QTRLTETRHHR
Trigger: ACGGTGATGACGAGTCTCCGTCAACCTCGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAAACGCTACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509320.5
CDS CCA 72 bp GTCGCAGGGGCATCTAATTGGCACCCTTTTCAACAGTaGATGGACAGGTGCTGGCAGGAGCGGAGAGGACAG +
Preference number: 6 (lower is better)
Translates to: VAGASNWHPFQQ*MDRCWQERRGQ
Trigger: CTGTCCTCTCCGCTCCTGCCAGCACCTGTCCATCCACTGTTGAAAAGGGTGCCAATTAGATGCCCCTGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514191.5
CDS CAA 90 bp TCTGCCTTTTTCCGTCTGTCTTCTTCCTGGAGCAGCCGCAGTCTCTaGCTCTCCATCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SAFFRLSSSWSSRSL*LSISFCRMLSFVRG
Trigger: CCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAAAAAGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353777.7
ENST00000509153.5
CDS GCA 72 bp TCTCCTTCTGCCGGATGCTCTCTTTCGTCAGGGGGTTaGAGTTGTTATGTCCAGGGAGCAAGCGGAAGTAGC +
Preference number: 6 (lower is better)
Translates to: SPSAGCSLSSGG*SCYVQGASGSS
Trigger: GCTACTTCCGCTTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000353777.7
ENST00000358377.7
ENST00000394234.6
ENST00000505361.5
ENST00000508412.5
ENST00000509153.5
ENST00000509320.5
ENST00000514191.5
ENST00000514486.5
ENST00000553457.1
ENST00000555042.5
CDS CCA 72 bp GAAGTGCCTCTGCTAAGTGTCGCAGGGGCATCTAATTaGCACCCTTTTCAACAGTGGATGGACAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: EVPLLSVAGASN*HPFQQWMDRCW
Trigger: CCAGCACCTGTCCATCCACTGTTGAAAAGGGTGCCAATTAGATGCCCCTGCGACACTTAGCAGAGGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514191.5
CDS GCA 72 bp GGAAAGTATCGGCGAGTAACAGAGAATAGACATCTCTaGCTACGTCCCCATCCTCTCTCCCTATCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GKYRRVTENRHL*LRPHPLSLSSC
Trigger: GCAGGAGGATAGGGAGAGAGGATGGGGACGTAGGCAGAGATGTCTATTCTCTGTTACTCGCCGATACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS TCA 72 bp GTTTGTTCATACTCCCATCTCATACTGGACGTGAGGTaGATTCTGAACATTCACAGGGGACACCGCCCCAAG +
Preference number: 6 (lower is better)
Translates to: VCSYSHLILDVR*ILNIHRGHRPK
Trigger: CTTGGGGCGGTGTCCCCTGTGAATGTTCAGAATTCACCTCACGTCCAGTATGAGATGGGAGTATGAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510612.5
CDS CAA 90 bp CACAGAACGCTCAGGAAGATGAAAATGAAGAAGTGGGTGGCCCATTaGCAGAGTCAAAGAGTGGGAGTTAGAGGGAGTTGTGTCTGCATC +
Preference number: 6 (lower is better)
Translates to: HRTLRKMKMKKWVAH*QSQRVGVRGSCVCI
Trigger: GATGCAGACACAACTCCCTCTAACTCCCACTCTTTGACTCTGCAAATGGGCCACCCACTTCTTCATTTTCATCTTCCTGAGCGTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557203.1
CDS TCA 72 bp TTGGAGTCAGACAGTTCCCCACTTCTAGCTTTACCTTaGGCAAATCACTCCACTCTGAGCCTCAGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LESDSSPLLALP*ANHSTLSLSLF
Trigger: GAAGAGACTGAGGCTCAGAGTGGAGTGATTTGCTCAAGGTAAAGCTAGAAGTGGGGAACTGTCTGACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513337.1
CDS CAA 72 bp CTCAGGAAGATGAAAATGAAGAAGTGGGTGGCCCATTaGCAGAGTCAAAGAGTGGGAGTTAGAGGGAGTTGT +
Preference number: 6 (lower is better)
Translates to: LRKMKMKKWVAH*QSQRVGVRGSC
Trigger: ACAACTCCCTCTAACTCCCACTCTTTGACTCTGCAAATGGGCCACCCACTTCTTCATTTTCATCTTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557203.1
CDS CAA 90 bp AACACAAACACAGTTCATTCTCTATGGCCGCTTTATAGTCCATGTTaGCACTCATCACTCTGCATGACTGTTTGTTCATACTCCCATCTC +
Preference number: 6 (lower is better)
Translates to: NTNTVHSLWPLYSPC*HSSLCMTVCSYSHL
Trigger: GAGATGGGAGTATGAACAAACAGTCATGCAGAGTGATGAGTGCAAACATGGACTATAAAGCGGCCATAGAGAATGAACTGTGTTTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510612.5
CDS CAA 72 bp ACAGTTCATTCTCTATGGCCGCTTTATAGTCCATGTTaGCACTCATCACTCTGCATGACTGTTTGTTCATAC +
Preference number: 6 (lower is better)
Translates to: TVHSLWPLYSPC*HSSLCMTVCSY
Trigger: GTATGAACAAACAGTCATGCAGAGTGATGAGTGCAAACATGGACTATAAAGCGGCCATAGAGAATGAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510612.5