RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCAF10 (Homo sapiens)

Ensembl gene IDs: ENSG00000122741

Ensembl transcript IDs: ENST00000242323.8, ENST00000377724.8, ENST00000461549.1, ENST00000478453.1, ENST00000483167.5

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAGGAACGTGACAAGAGCTACCATGCAAAATGACCAGAAGAACTaGAGTTCAGTGGCACAGATCAGCAGGAGCAGAGGAATGCTGCAA +
Preference number: 1 (lower is better)
Translates to: GRNVTRATMQNDQKN*SSVAQISRSRGMLQ
Trigger: TTGCAGCATTCCTCTGCTCCTGCTGATCTGTGCCACTGAACTCCAGTTCTTCTGGTCATTTTGCATGGTAGCTCTTGTCACGTTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 90 bp ATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAAGAAAAATaGGTAAACCCCTACCTCTTTACTCTTGATTCCTCTTCCACCCTA +
Preference number: 1 (lower is better)
Translates to: MVTELACHTWLREEK*VNPYLFTLDSSSTL
Trigger: TAGGGTGGAAGAGGAATCAAGAGTAAAGAGGTAGGGGTTTACTCATTTTTCTTCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 90 bp CTGCAATCCCGAGACCCTCAGAATAAAGATTACTTGAGGTTGCTATaGAAAATACAGATTCCTGTCCTCCCCCTGGCTGAATCAGAATCT +
Preference number: 1 (lower is better)
Translates to: LQSRDPQNKDYLRLL*KIQIPVLPLAESES
Trigger: AGATTCTGATTCAGCCAGGGGGAGGACAGGAATCTGTATTTTTCATAGCAACCTCAAGTAATCTTTATTCTGAGGGTCTCGGGATTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 90 bp CTGGCTCAGGGAAGAAAAATGAGTAAACCCCTACCTCTTTACTCTTaGTTCCTCTTCCACCCTAATACTGTTAACACATCATCCTGTGTG +
Preference number: 1 (lower is better)
Translates to: LAQGRKMSKPLPLYS*FLFHPNTVNTSSCV
Trigger: CACACAGGATGATGTGTTAACAGTATTAGGGTGGAAGAGGAATCAAGAGTAAAGAGGTAGGGGTTTACTCATTTTTCTTCCCTGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 90 bp AAACCTGGGTTTGAATCCCAGTGCTGCCACTCACTGCTAACTCTATaGCTTAAGGCAAGTCATTTAATCTTTCTGACCCACTATTACCTC +
Preference number: 1 (lower is better)
Translates to: KPGFESQCCHSLLTL*LKASHLIFLTHYYL
Trigger: GAGGTAATAGTGGGTCAGAAAGATTAAATGACTTGCCTTAAGTCATAGAGTTAGCAGTGAGTGGCAGCACTGGGATTCAAACCCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR GCA 90 bp AGCATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTaGTGTACTTTGGTACCTTGCTGTTTATTCCTTAGTCTAGCAGCA +
Preference number: 1 (lower is better)
Translates to: SMIDPSANTEPLLLL*CTLVPCCLFLSLAA
Trigger: TGCTGCTAGACTAAGGAATAAACAGCAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 90 bp AGCCTAGGCTTTAACTGGGAGTTTCTATTATCTAGAAGGTTACTGTaGACCTTTCAGAAAAGTGGAAAGCAACCAAAAGAGCTGTCTCAA +
Preference number: 1 (lower is better)
Translates to: SLGFNWEFLLSRRLL*TFQKSGKQPKELSQ
Trigger: TTGAGACAGCTCTTTTGGTTGCTTTCCACTTTTCTGAAAGGTTCACAGTAACCTTCTAGATAATAGAAACTCCCAGTTAAAGCCTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR GCA 90 bp GCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGGTACCTTaGTGTTTATTCCTTAGTCTAGCAGCATCCTTAGTTTGTAGTATA +
Preference number: 1 (lower is better)
Translates to: ANTEPLLLLCCTLVP*CLFLSLAASLVCSI
Trigger: TATACTACAAACTAAGGATGCTGCTAGACTAAGGAATAAACAGCAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGATCAATTCTAATGTCATaGGTTTCTCCTACCCCAGTC +
Preference number: 2 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGSILMS*VSPTPV
Trigger: GACTGGGGTAGGAGAAACCCATGACATTAGAATTGA...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACAGCTTGAAGAGGACTaGAACTCTCCCCTCACGAAT +
Preference number: 2 (lower is better)
Translates to: TTHVEETARKLLFKVEQSQLEED*NSPLTN
Trigger: ATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCTGTATGATGCTGGATaGCCAAGTACTAAGGTCACA +
Preference number: 2 (lower is better)
Translates to: YDNSLKRTATLPSRMVTELYDAG*PSTKVT
Trigger: TGTGACCTTAGTACTTGGTCATCCAGCATCATACAG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTTGGAGATGCCTGTATaGTGCTGGATGACCAAGTAC +
Preference number: 2 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSLEMPV*CWMTKY
Trigger: GTACTTGGTCATCCAGCATCATACAGGCATCTCCAA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAAGGAAGGAAGGAACGTaGCAAGAGCTACCATGCAAA +
Preference number: 2 (lower is better)
Translates to: TTHVEETARKLLFKVEQSRKEGT*QELPCK
Trigger: TTTGCATGGTAGCTCTTGTCACGTTCCTTCCTTCCT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGAATGACCAGAAGAACTaGAGTTCAGTGGCACAGATC +
Preference number: 2 (lower is better)
Translates to: YDNSLKRTATLPSRMVTENDQKN*SSVAQI
Trigger: GATCTGTGCCACTGAACTCCAGTTCTTCTGGTCATT...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCCCAGTCAAAACTCCTaGCAAATGTCCACAAAATTG +
Preference number: 2 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEPSQNS*QMSTKL
Trigger: CAATTTTGTGGACATTTGGCAGGAGTTTTGACTGGG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATATTCATGCGAGTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNIFMRVS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGACTCGCATGAA...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 90 bp AGTCTTGATATCCAAGTAGCTGACTACTGTACTTATGATAACAGCTaGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGTTG +
Preference number: 2 (lower is better)
Translates to: SLDIQVADYCTYDNS*KRTATLPSRMVTEL
Trigger: CAACTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAGTACAGTAGTCAGCTACTTGGATATCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCAGAATCTCATAAGGTaGGGCTCAGGTTTCTGCACT +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLQNLIR*GSGFCT
Trigger: AGTGCAGAAACCTGAGCCTCACCTTATGAGATTCTG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGTTTCACAGCGCTCAGTaGCTGCTGGTCATTAAATGG +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLFHSAQ*LLVIKW
Trigger: CCATTTAATGACCAGCAGTCACTGAGCGCTGTGAAA...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGGAACAGTCAGCCTTGTaGTTGAGTCCTGCTTTATGC +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLEQSAL*LSPALC
Trigger: GCATAAAGCAGGACTCAAGCACAAGGCTGACTGTTC...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAGAACTGGAGTTCAGTaGCACAGATCAGCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDRTGVQ*HRSAGA
Trigger: TGCTCCTGCTGATCTGTGCCACTGAACTCCAGTTCT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGAGTAAGCACAGGCTTTaGACAAGACACAAACCTGGG +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLSKHRL*TRHKPG
Trigger: CCCAGGTTTGTGTCTTGTCCAAAGCCTGTGCTTACT...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCTGTATGATGCTGGATaGCCAAGTACTAAGGTCACA +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLLYDAG*PSTKVT
Trigger: TGTGACCTTAGTACTTGGTCATCCAGCATCATACAG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATACGGGGTATCACTGAGTaGATTTTCACAGCGCTCAGT +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNIRGITE*IFTALS
Trigger: ACTGAGCGCTGTGAAAATTCACTCAGTGATACCCCG...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCCATGTGGAGGAGACTaGAAGGAAGCTGTTATTCAA +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLPCGGD*KEAVIQ
Trigger: TTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTGCTGGAGTGCAGTGGTaGAATCTCGGCTTACTGCAC +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIAGVQW*NLGLLH
Trigger: GTGCAGTAAGCCGAGATTGCACCACTGCACTCCAGC...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATATTGCCCAGGGTGGAGTaGAATAGTGCAATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNILPRVE*NSAILA
Trigger: AGCCAAGATTGCACTATTGCACTCCACCCTGGGCAA...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCTGGTCTGGAACTCCTaGGCTCAAGTGAACCTCCCA +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEILVWNS*AQVNLP
Trigger: TGGGAGGTTCACTTGAGCCCAGGAGTTCCAGACCAG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATATTGGAGATGCCTGTATaGTGCTGGATGACCAAGTAC +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNILEMPV*CWMTKY
Trigger: GTACTTGGTCATCCAGCATCATACAGGCATCTCCAA...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAGGAAGGAAGGAACGTaGCAAGAGCTACCATGCAAA +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNIRKEGT*QELPCK
Trigger: TTTGCATGGTAGCTCTTGTCACGTTCCTTCCTTCCT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTCCCCTCACGAATGGTaGCAGAGTTGGCTTGTCACA +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEISPHEW*QSWLVT
Trigger: TGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTACACAAACCTGGGTTTaGATCCCAGTGCTGCCACTC +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEITQTWV*IPVLPL
Trigger: GAGTGGCAGCACTGGGATTCAAACCCAGGTTTGTGT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCCCAGTCAAAACTCCTaGCAAATGTCCACAAAATTG +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLPSQNS*QMSTKL
Trigger: CAATTTTGTGGACATTTGGCAGGAGTTTTGACTGGG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCTTGTGCTTGAGTCCTaGTTTATGCTTGCGTGTTTC +
Preference number: 2 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDLVLES*FMLACF
Trigger: GAAACACGCAAGCATAAAGCAGGACTCAAGCACAAG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGTCACAAGTGTGTTCATaGACCCATAAGAACCAGGAT +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLSQVCS*THKNQD
Trigger: ATCCTGGTTCTTATGGGTCCATGAACACACTTGTGA...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAATGACCAGAAGAACTaGAGTTCAGTGGCACAGATC +
Preference number: 2 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDNDQKN*SSVAQI
Trigger: GATCTGTGCCACTGAACTCCAGTTCTTCTGGTCATT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATACTCTATTGCCCAGGGTaGAGTGCAATAGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNILYCPG*SAIVQS
Trigger: AGATTGCACTATTGCACTCCACCCTGGGCAATAGAG...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 90 bp GCAAGTCATTTAATCTTTCTGACCCACTATTACCTCCAAATTAAATaGGGGCTCATTCCACCTACCCTGCAAGTTTTTGTGAGGGTTAGT +
Preference number: 2 (lower is better)
Translates to: ASHLIFLTHYYLQIK*GLIPPTLQVFVRVS
Trigger: ACTAACCCTCACAAAAACTTGCAGGGTAGGTGGAATGAGCCCCAATTTAATTTGGAGGTAATAGTGGGTCAGAAAGATTAAATGACTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCTACCTCTTTACTCTTaGTTCCTCTTCCACCCTAAT +
Preference number: 2 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDLPLYS*FLFHPN
Trigger: ATTAGGGTGGAAGAGGAATCAAGAGTAAAGAGGTAG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATACTTATGATAACAGCTTaGAGAGGACTGCAACTCTCC +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNILMITA*RGLQLS
Trigger: GGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAG...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATTTCAACAACCAATATaGCAATATCCAACTTCTAGG +
Preference number: 2 (lower is better)
Translates to: TTHVEETARKLLFKVEQSFQQPI*QYPTSR
Trigger: CCTAGAAGTTGGATATTGGCATATTGGTTGTTGAAA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACTCACAAGTGTGTTCATaGACCCATAAGAACCAGGAT +
Preference number: 2 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDSQVCS*THKNQD
Trigger: ATCCTGGTTCTTATGGGTCCATGAACACACTTGTGA...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAGAATGCTGCAAAAGATaGTGCTGCATAGAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNIECCKR*CCIESN
Trigger: GTTAGACTCTATGCAGCATCATCTTTTGCAGCATTC...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCAGAATCTCATAAGGTaGGGCTCAGGTTTCTGCACT +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIQNLIR*GSGFCT
Trigger: AGTGCAGAAACCTGAGCCTCACCTTATGAGATTCTG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTGCTGGTCTAGCATCTaGCATGAACTCTTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEICWSSI*HELFPE
Trigger: CTCTGGAAAGAGTTCATGTCAGATGCTAGACCAGCA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCACTACCACATATTCTaGCAAATAAGGGAAACACTA +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLHYHIF*QIRETL
Trigger: TAGTGTTTCCCTTATTTGTCAGAATATGTGGTAGTG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTAACACGGGGTATCACTaGGTGAATTTTCACAGCGCT +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEINTGYH*VNFHSA
Trigger: AGCGCTGTGAAAATTCACTCAGTGATACCCCGTGTT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTGAACAGTCAGCCTTGTaGTTGAGTCCTGCTTTATGC +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIEQSAL*LSPALC
Trigger: GCATAAAGCAGGACTCAAGCACAAGGCTGACTGTTC...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 90 bp TTTCTTAAAAGCATGATAGACCCCTCTGCAAATACAGAGCCTTTGTaGTTGCTTTGCTGTACTTTGGTACCTTGCTGTTTATTCCTTAGT +
Preference number: 2 (lower is better)
Translates to: FLKSMIDPSANTEPL*LLCCTLVPCCLFLS
Trigger: ACTAAGGAATAAACAGCAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCATGCTTTTAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCTTATGATAACAGCTTaGAGAGGACTGCAACTCTCC +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEILMITA*RGLQLS
Trigger: GGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATACTCTATAAATGTGTGTaGATAGTTAGTTGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNILYKCV*IVSWQV
Trigger: GACCTGCCAACTAACTATTCACACACATTTATAGAG...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACGTCCTGCTTTATGCTTaGGTGTTTCATAACAAAACA +
Preference number: 2 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDVLLYA*VFHNKT
Trigger: TGTTTTGTTATGAAACACGCAAGCATAAAGCAGGAC...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGAAGGAATTAGAAGACTaGAATTCAAGTCCTAACTCT +
Preference number: 2 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLKELED*NSSPNS
Trigger: AGAGTTAGGACTTGAATTCCAGTCTTCTAATTCCTT...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCTCAGGGAAGAAAAATaGGTAAACCCCTACCTCTTT +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEILREEK*VNPYLF
Trigger: AAAGAGGTAGGGGTTTACTCATTTTTCTTCCCTGAG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATATACTTGAGGTTGCTATaGAAAATACAGATTCCTGTC +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNIYLRLL*KIQIPV
Trigger: GACAGGAATCTGTATTTTTCATAGCAACCTCAAGTA...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAGGCGTGTACCAACATaGCCATCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNIRRVPT*PSNFCI
Trigger: AATACAAAAATTAGATGGGCATGTTGGTACACGCCT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCTCTATAAATGTGTGTaGATAGTTAGTTGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEILYKCV*IVSWQV
Trigger: GACCTGCCAACTAACTATTCACACACATTTATAGAG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTGGACAAAGGTTCTTTTaGGTTTGCTGGCTGTTAATT +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIGQRFF*VCWLLI
Trigger: AATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCC...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTATCTACTCCCATGCCTaGCTTTCTAAAATCTATTGG +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIIYSHA*LSKIYW
Trigger: CCAATAGATTTTAGAAAGGCAGGCATGGGAGTAGAT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR GCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAACAAAATATACATGTaGTTTGGGCTTCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LRQMILYTSGLRESLYNINKIYM*FGLLRK
Trigger: TTTCCTCAGAAGCCCAAAGCACATGTATATTTTGTT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 90 bp CACATACATATAGGAGGTGAATGTGAGATATATTCCTTAGGGCTTTaGATAAAACCCATATCTTTATCCCTAGTTCATTTACAAGAGAGC +
Preference number: 2 (lower is better)
Translates to: HIHIGGECEIYSLGL*IKPISLSLVHLQES
Trigger: GCTCTCTTGTAAATGAACTAGGGATAAAGATATGGGTTTTATCAAAAGCCCTAAGGAATATATCTCACATTCACCTCCTATATGTATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTCCTTGCTAACTTTTTaGTCATCACCATATCTCAAG +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEISLLTF*SSPYLK
Trigger: CTTGAGATATGGTGATGATCAAAAAGTTAGCAAGGA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTAAGGAATTAGAAGACTaGAATTCAAGTCCTAACTCT +
Preference number: 2 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIKELED*NSSPNS
Trigger: AGAGTTAGGACTTGAATTCCAGTCTTCTAATTCCTT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CCA 72 bp GTGACAAGAGCTACCATGCAAAATGACCAGAAGAACTaGAGTTCAGTGGCACAGATCAGCAGGAGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: VTRATMQNDQKN*SSVAQISRSRG
Trigger: TCCTCTGCTCCTGCTGATCTGTGCCACTGAACTCCAGTTCTTCTGGTCATTTTGCATGGTAGCTCTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 72 bp CGGTTTCCTTCAAGACCAACACGGGGTATCACTGAGTaGATTTTCACAGCGCTCAGTGACTGCTGGTCATTA +
Preference number: 3 (lower is better)
Translates to: RFPSRPTRGITE*IFTALSDCWSL
Trigger: TAATGACCAGCAGTCACTGAGCGCTGTGAAAATTCACTCAGTGATACCCCGTGTTGGTCTTGAAGGAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATACGAATGGTGACAGAGTaGGCTTGTCACACCTGGCTC +
Preference number: 3 (lower is better)
Translates to: LRQMILYTSGLRESLYNIRMVTE*ACHTWL
Trigger: GAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCG...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCACTTATGATAACAGCTaGAAGAGGACTGCAACTCTC +
Preference number: 3 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSTYDNS*KRTATL
Trigger: GAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAGT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 72 bp CGAGACCCTCAGAATAAAGATTACTTGAGGTTGCTATaGAAAATACAGATTCCTGTCCTCCCCCTGGCTGAA +
Preference number: 3 (lower is better)
Translates to: RDPQNKDYLRLL*KIQIPVLPLAE
Trigger: TTCAGCCAGGGGGAGGACAGGAATCTGTATTTTTCATAGCAACCTCAAGTAATCTTTATTCTGAGGGTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CCA 72 bp CTGGATGACCAAGTACTAAGGTCACAAGTGTGTTCATaGACCCATAAGAACCAGGATCTTGACCCAAACTTA +
Preference number: 3 (lower is better)
Translates to: LDDQVLRSQVCS*THKNQDLDPNL
Trigger: TAAGTTTGGGTCAAGATCCTGGTTCTTATGGGTCCATGAACACACTTGTGACCTTAGTACTTGGTCATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCGAATGGTGACAGAGTaGGCTTGTCACACCTGGCTC +
Preference number: 3 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIRMVTE*ACHTWL
Trigger: GAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCACCTGCCACCACGCTaGGCTATGATTTTTGTATTT +
Preference number: 3 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLHLPPR*AMIFVF
Trigger: AAATACAAAAATCATAGCCAAGCGTGGTGGCAGGTG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 72 bp ACCTGCAATCCCGAGACCCTCAGAATAAAGATTACTTaGGGTTGCTATGAAAAATACAGATTCCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: TCNPETLRIKIT*GCYEKYRFLSS
Trigger: GGAGGACAGGAATCTGTATTTTTCATAGCAACCTCAAGTAATCTTTATTCTGAGGGTCTCGGGATTGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR GCA 72 bp GACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTaGTGTACTTTGGTACCTTGCTGTTTATTCCTTAGT +
Preference number: 3 (lower is better)
Translates to: DPSANTEPLLLL*CTLVPCCLFLS
Trigger: ACTAAGGAATAAACAGCAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAATAAGAACCAGGATCTaGACCCAAACTTATAAGATC +
Preference number: 3 (lower is better)
Translates to: TTHVEETARKLLFKVEQSIRTRI*TQTYKI
Trigger: GATCTTATAAGTTTGGGTCAAGATCCTGGTTCTTAT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR GCA 72 bp GAGCCTTTGTTGTTGCTTTGCTGTACTTTGGTACCTTaGTGTTTATTCCTTAGTCTAGCAGCATCCTTAGTT +
Preference number: 3 (lower is better)
Translates to: EPLLLLCCTLVP*CLFLSLAASLV
Trigger: AACTAAGGATGCTGCTAGACTAAGGAATAAACAGCAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAGGACAAAGGTTCTTTaGAGTTTGCTGGCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: LRQMILYTSGLRESLYNIRTKVL*SLLAVN
Trigger: ATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCCT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 72 bp GGAAGAAAAATGAGTAAACCCCTACCTCTTTACTCTTaGTTCCTCTTCCACCCTAATACTGTTAACACATCA +
Preference number: 3 (lower is better)
Translates to: GRKMSKPLPLYS*FLFHPNTVNTS
Trigger: TGATGTGTTAACAGTATTAGGGTGGAAGAGGAATCAAGAGTAAAGAGGTAGGGGTTTACTCATTTTTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTAGGACAAAGGTTCTTTaGAGTTTGCTGGCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIRTKVL*SLLAVN
Trigger: ATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCCT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTAATACAGAGCCTTTGTaGTTGCTTTGCTGTACTTTG +
Preference number: 3 (lower is better)
Translates to: IFIPSSFTREQRNGNFEINTEPL*LLCCTL
Trigger: CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTATAAGAACCAGGATCTaGACCCAAACTTATAAGATC +
Preference number: 3 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIIRTRI*TQTYKI
Trigger: GATCTTATAAGTTTGGGTCAAGATCCTGGTTCTTAT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR TCA 72 bp ATCATCACCATATCTCAAGGAGGACAAAGGTTCTTTTaGGTTTGCTGGCTGTTAATTTTTAATTCTCATCTG +
Preference number: 3 (lower is better)
Translates to: IITISQGGQRFF*VCWLLIFNSHL
Trigger: CAGATGAGAATTAAAAATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCCTCCTTGAGATATGGTGATGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAGCCCGCGGCCCAGGCTaGGCTCTTTCAGCCACCCGA +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGARGPG*ALSATR
Trigger: TCGGGTGGCTGAAAGAGCGCAGCCTGGGCCGCGGGC...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAAGGGCTTCGGGCGGGTaGAGGGGGATGGGTCGCATC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGRASGG*RGMGRI
Trigger: GATGCGACCCATCCCCCTCCACCCGCCCGAAGCCCT...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCGCGGGTGGAGGGGGATaGGTCGCATCAGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSAGGGG*VASAPG
Trigger: TCCCGGGGCTGATGCGACCCATCCCCCTCCACCCGC...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR TCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAGCAGCTGTAAGGACGTaGTGCAGTTTCCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGAAVRT*CSFRGH
Trigger: GTGACCACGGAAACTGCATCACGTCCTTACAGCTGC...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGGCGAGTACTCGAGGTTaGAGACGGCGCCGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEASTRG*RRRRGC
Trigger: GCACCCACGGCGCCGTCTTCAACCTCGAGTACTCGC...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAAGCACCGAAGAAGAGTaGCCCAGCCTTTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGSTEEE*PSLLGA
Trigger: TGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCT...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGACAGGCTAGAGTACAGTaGTGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGQARVQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCACCACTGTACTCTAGCCTG...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGGCTGCCTGCCCCTCGTaGGGCGTCGGCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMAACPS*GVGSSA
Trigger: GGCTGAGGAGCCGACGCCCCACGAGGGGCAGGCAGC...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGGTCGGCCCCGGCTCTTaGCCCTGCAGTCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLVGPGS*PCSLAR
Trigger: CCGGGCCAGACTGCAGGGCCAAGAGCCGGGGCCGAC...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR TCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGATCCCCTCACGAATGGTaGCAGAGTTGGCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGSPHEW*QSWLVT
Trigger: TGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGA...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGCGGGGCGGAGGCAGTTaGGGACTCCGGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMRGGGS*GLRSSR
Trigger: CCTGGAGCTCCGGAGTCCTCAACTGCCTCCGCCCCG...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGTCTGTAGTTGTCAGTaGCCGGTGGCCGCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSVCSCQ*PVAACL
Trigger: CAGGCACGCGGCCACCGGTCACTGACAACTACAGAC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242323.8
CDS-3UTR TCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAATCATCACTGTTGCTTaGGCACCGAAGAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGIITVA*APKKSG
Trigger: GCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGAT...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTTTGAAGACGGCGCCGTaGGTGCGGGTGCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCLKTAP*VRVLRY
Trigger: GTACCTCAGCACCCGCACCCACGGCGCCGTCTTCAA...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR TCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCTGGTCTCGAACTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTELVSNS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGTTCGAGACCAG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAGAACAGTCAGCCTTGTaGTTGAGTCCTGCTTTATGC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGEQSAL*LSPALC
Trigger: GCATAAAGCAGGACTCAAGCACAAGGCTGACTGTTC...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCGAGCGACTGAGCATCTaGGCACCTGATCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSERLSI*APDLGG
Trigger: GCCACCCAGATCAGGTGCCCAGATGCTCAGTCGCTC...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242323.8
CDS-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAGTGATGCAGTTTCCGTaGTCACTCTCACCAAGAACT +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGVMQFP*SLSPRT
Trigger: AGTTCTTGGTGAGAGTGACCACGGAAACTGCATCAC...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAAGTAAGCACAGGCTTTaGACAAGACACAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGSKHRL*TRHKPG
Trigger: CCCAGGTTTGTGTCTTGTCCAAAGCCTGTGCTTACT...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGACTTATGATAACAGCTTaGAGAGGACTGCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGLMITA*RGLQLS
Trigger: GGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAG...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCTGGTCTCGAACTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCLVSNS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGTTCGAGACCAG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGACTTGTGCTTGAGTCCTaGTTTATGCTTGCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGLVLES*FMLACF
Trigger: GAAACACGCAAGCATAAAGCAGGACTCAAGCACAAG...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAAGGGTTTCACCATGTTaGCTAGGCTGTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGRVSPC*LGCSQT
Trigger: AGTTTGAGAACAGCCTAGCCAACATGGTGAAACCCT...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAGAATGCTGCAAAAGATaGTGCTGCATAGAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGECCKR*CCIESN
Trigger: GTTAGACTCTATGCAGCATCATCTTTTGCAGCATTC...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCCCACCTCAGCCTCCTaGGTAGCTAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLPTSAS*VARTTG
Trigger: GCCTGTAGTCCTAGCTACTCAGGAGGCTGAGGTGGG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCGTGGGTGCGGGTGCTaGGGTACACCGAGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIRGCGC*GTPSPR
Trigger: CCGCGGACTCGGTGTACCTCAGCACCCGCACCCACG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGCCCAGCCTTTTGGGTaGAGCTGTAAGGACGTGATG +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSAQPFG*SCKDVM
Trigger: CATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCGCTGGAGTGCAGTGGTaGAATCTCGGCTTACTGCAC +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSAGVQW*NLGLLH
Trigger: GTGCAGTAAGCCGAGATTGCACCACTGCACTCCAGC...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTTTCATGCGAGTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCFMRVS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGACTCGCATGAA...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCCTGGTCTGGAACTCCTaGGCTCAAGTGAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSLVWNS*AQVNLP
Trigger: TGGGAGGTTCACTTGAGCCCAGGAGTTCCAGACCAG...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAGAGCATCTGGGCACCTaGTCTGGGTGGCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNIEHLGT*SGWQSR
Trigger: CCGACTCTGCCACCCAGATCAGGTGCCCAGATGCTC...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242323.8
CDS-3UTR TCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGATTAACCTCATTCGCATaGGAAAACGTGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGLTSFA*ENVCER
Trigger: TCTTTCACACACGTTTTCTCATGCGAATGAGGTTAA...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTCCCCTCACGAATGGTaGCAGAGTTGGCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSSPHEW*QSWLVT
Trigger: TGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGCCTCCCGGGTTCAAGTaGTTCTCTTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMPPGFK*FSCLSL
Trigger: GAGGCTGAGGCAAGAGAATCACTTGAACCCGGGAGG...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCCCACCTCAGCCTCCTaGGTAGCTAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDPTSAS*VARTTG
Trigger: GCCTGTAGTCCTAGCTACTCAGGAGGCTGAGGTGGG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGATTGTGCCTAAAACTTTaGCTGATACAAAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGLCLKL*LIQRNP
Trigger: CGGGTTTCTTTGTATCAGCCAAAGTTTTAGGCACAA...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCACAGTACCACCCATGTaGAGGAGACTGCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSTVPPM*RRLQGS
Trigger: GCTTCCTTGCAGTCTCCTCCACATGGGTGGTACTGT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 72 bp TGCAACTCTCCCCTCACGAATGGTGACAGAGTTGGCTaGTCACACCTGGCTCAGGGAAGAAAAATGAGTAAA +
Preference number: 4 (lower is better)
Translates to: CNSPLTNGDRVG*SHLAQGRKMSK
Trigger: TTTACTCATTTTTCTTCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACACCTGTGTGAGCGACTaGGCATCTGGGCACCTGATC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDTCVSD*ASGHLI
Trigger: GATCAGGTGCCCAGATGCTCAGTCGCTCACACAGGT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242323.8
CDS-3UTR TCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTCCACTAAGGCACCCTaGGGCAATCTGACAATGTGT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSSTKAP*GNLTMC
Trigger: ACACATTGTCAGATTGCCTCAGGGTGCCTTAGTGGA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCCGGGGTATCACTGAGTaGATTTTCACAGCGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSRGITE*IFTALS
Trigger: ACTGAGCGCTGTGAAAATTCACTCAGTGATACCCCG...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGGCCCAGCCTTTTGGGTaGAGCTGTAAGGACGTGATG +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMAQPFG*SCKDVM
Trigger: CATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGC...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCCTCATCATCACTGTTaGTTGAGCACCGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEPHHHC*LSTEEE
Trigger: CTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGGCTGGAGTGCAGTGGTaGAATCTCGGCTTACTGCAC +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMAGVQW*NLGLLH
Trigger: GTGCAGTAAGCCGAGATTGCACCACTGCACTCCAGC...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATTGCCCAGGGTGGAGTaGAATAGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSLPRVE*NSAILA
Trigger: AGCCAAGATTGCACTATTGCACTCCACCCTGGGCAA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACTCTGGGCACCTGATCTaGGTGGCAGAGTCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDSGHLI*VAESVC
Trigger: ACAGACCGACTCTGCCACCCAGATCAGGTGCCCAGA...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242323.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCGGGGACTGGCTTCTTTaGGCAAGCAGTCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSGDWLL*ASSQQV
Trigger: AACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCC...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCATGAGCCACTGCGCCTaGCCGAGTAGAGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSMSHCA*PSREEF
Trigger: AAATTCTTCTCTACTCGGCCAGGCGCAGTGGCTCAT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTATGAGCCACTGCGCCTaGCCGAGTAGAGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCMSHCA*PSREEF
Trigger: AAATTCTTCTCTACTCGGCCAGGCGCAGTGGCTCAT...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGGCGCTCAGTGACTGCTaGTCATTAAATGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEALSDC*SLNGDD
Trigger: ATCATCCCCATTTAATGACCAGCAGTCACTGAGCGC...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAACTATGATGACAAGGTaGGCCAGAAACTCTAGGACC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSTMMTR*ARNSRT
Trigger: GGTCCTAGAGTTTCTGGCTCACCTTGTCATCATAGT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACGCAGCTGTAAGGACGTaGTGCAGTTTCCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDAAVRT*CSFRGH
Trigger: GTGACCACGGAAACTGCATCACGTCCTTACAGCTGC...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATTGGAGATGCCTGTATaGTGCTGGATGACCAAGTAC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSLEMPV*CWMTKY
Trigger: GTACTTGGTCATCCAGCATCATACAGGCATCTCCAA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTAGGAAGGAAGGAACGTaGCAAGAGCTACCATGCAAA +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCRKEGT*QELPCK
Trigger: TTTGCATGGTAGCTCTTGTCACGTTCCTTCCTTCCT...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCAGGAAGGAAGGAACGTaGCAAGAGCTACCATGCAAA +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSRKEGT*QELPCK
Trigger: TTTGCATGGTAGCTCTTGTCACGTTCCTTCCTTCCT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACAGAATCTCATAAGGTaGGGCTCAGGTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSQNLIR*GSGFCT
Trigger: AGTGCAGAAACCTGAGCCTCACCTTATGAGATTCTG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATGCTGGTCTAGCATCTaGCATGAACTCTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSCWSSI*HELFPE
Trigger: CTCTGGAAAGAGTTCATGTCAGATGCTAGACCAGCA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGACACAAACCTGGGTTTaGATCCCAGTGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMTQTWV*IPVLPL
Trigger: GAGTGGCAGCACTGGGATTCAAACCCAGGTTTGTGT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAAACACGGGGTATCACTaGGTGAATTTTCACAGCGCT +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSNTGYH*VNFHSA
Trigger: AGCGCTGTGAAAATTCACTCAGTGATACCCCGTGTT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGATTTCAACAACCAATATaGCAATATCCAACTTCTAGG +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGFQQPI*QYPTSR
Trigger: CCTAGAAGTTGGATATTGGCATATTGGTTGTTGAAA...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCCATGTGGAGGAGACTaGAAGGAAGCTGTTATTCAA +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEPCGGD*KEAVIQ
Trigger: TTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAAATAGACGTCTCTTCTaGTTTAGCCATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGNRRLF*FSHFIF
Trigger: GAAAATGAAATGGCTAAAGCAGAAGAGACGTCTATT...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCACAGCGCTCAGTGACTaGTGGTCATTAAATGGGGAT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSTALSD*WSLNGD
Trigger: ATCCCCATTTAATGACCAGCAGTCACTGAGCGCTGT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAGCACCGAAGAAGAGTaGCCCAGCCTTTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDSTEEE*PSLLGA
Trigger: TGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGACAGTACCACCCATGTaGAGGAGACTGCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLTVPPM*RRLQGS
Trigger: GCTTCCTTGCAGTCTCCTCCACATGGGTGGTACTGT...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCTGGTCTGGAACTCCTaGGCTCAAGTGAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDLVWNS*AQVNLP
Trigger: TGGGAGGTTCACTTGAGCCCAGGAGTTCCAGACCAG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCTCTATTGCCCAGGGTaGAGTGCAATAGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCLYCPG*SAIVQS
Trigger: AGATTGCACTATTGCACTCCACCCTGGGCAATAGAG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTGCGCTCAGTGACTGCTaGTCATTAAATGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCALSDC*SLNGDD
Trigger: ATCATCCCCATTTAATGACCAGCAGTCACTGAGCGC...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTTTCACCCAGCTAGTGTaGCCATGTAAAGTGCATACT +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCFTQLV*PCKVHT
Trigger: AGTATGCACTTTACATGGTCACACTAGCTGGGTGAA...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGTCCACTAAGGCACCCTaGGGCAATCTGACAATGTGT +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLSTKAP*GNLTMC
Trigger: ACACATTGTCAGATTGCCTCAGGGTGCCTTAGTGGA...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCTGTATGATGCTGGATaGCCAAGTACTAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCLYDAG*PSTKVT
Trigger: TGTGACCTTAGTACTTGGTCATCCAGCATCATACAG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACTTATGATAACAGCTTaGAGAGGACTGCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSLMITA*RGLQLS
Trigger: GGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGAGTCAGCCTTGTGCTTaGGTCCTGCTTTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLSQPCA*VLLYAC
Trigger: GCAAGCATAAAGCAGGACTCAAGCACAAGGCTGACT...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACACACAAACCTGGGTTTaGATCCCAGTGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDTQTWV*IPVLPL
Trigger: GAGTGGCAGCACTGGGATTCAAACCCAGGTTTGTGT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCGGGGTATCACTGAGTaGATTTTCACAGCGCTCAGT +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLRGITE*IFTALS
Trigger: ACTGAGCGCTGTGAAAATTCACTCAGTGATACCCCG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCCATGTGGAGGAGACTaGAAGGAAGCTGTTATTCAA +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCPCGGD*KEAVIQ
Trigger: TTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTTTGTGTTTTTCAACCTaGAATCCCGAGACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCLCFST*NPETLR
Trigger: TCTGAGGGTCTCGGGATTGCAGGTTGAAAAACACAA...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTTGTGTTTTTCAACCTaGAATCCCGAGACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSLCFST*NPETLR
Trigger: TCTGAGGGTCTCGGGATTGCAGGTTGAAAAACACAA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCATGATAGACCCCTCTaGAAATACAGAGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEHDRPL*KYRAFV
Trigger: AACAAAGGCTCTGTATTTGCAGAGGGGTCTATCATG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAAATCCCATAGCCATGTaGGGAAGAAATCATTCGTCC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSNPIAM*GRNHSS
Trigger: GGACGAATGATTTCTTCCCCACATGGCTATGGGATT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGGGGGACTGGCTTCTTTaGGCAAGCAGTCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLGDWLL*ASSQQV
Trigger: AACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCC...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGAGAACTGGAGTTCAGTaGCACAGATCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMRTGVQ*HRSAGA
Trigger: TGCTCCTGCTGATCTGTGCCACTGAACTCCAGTTCT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 72 bp ATCCAAGTAGCTGACTACTGTACTTATGATAACAGCTaGAAGAGGACTGCAACTCTCCCCTCACGAATGGTG +
Preference number: 4 (lower is better)
Translates to: IQVADYCTYDNS*KRTATLPSRMV
Trigger: CACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAGTACAGTAGTCAGCTACTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGGAAACTCCTTCTCTTTaGGAGGCTCGTGACATGTGT +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMETPSL*EARDMC
Trigger: ACACATGTCACGAGCCTCTCAAAGAGAAGGAGTTTC...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGAAGACTATTTCGTGGTaGAACTCCTTCTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEKTISW*NSFSLR
Trigger: TCTCAAAGAGAAGGAGTTTCACCACGAAATAGTCTT...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGAATGCTGCAAAAGATaGTGCTGCATAGAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSECCKR*CCIESN
Trigger: GTTAGACTCTATGCAGCATCATCTTTTGCAGCATTC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCTACCTCTTTACTCTTaGTTCCTCTTCCACCCTAAT +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCLPLYS*FLFHPN
Trigger: ATTAGGGTGGAAGAGGAATCAAGAGTAAAGAGGTAG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCCTCAGGGAAGAAAAATaGGTAAACCCCTACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSLREEK*VNPYLF
Trigger: AAAGAGGTAGGGGTTTACTCATTTTTCTTCCCTGAG...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGCAGAATCTCATAAGGTaGGGCTCAGGTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMQNLIR*GSGFCT
Trigger: AGTGCAGAAACCTGAGCCTCACCTTATGAGATTCTG...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCCTCCCGGGTTCAAGTaGTTCTCTTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIPPGFK*FSCLSL
Trigger: GAGGCTGAGGCAAGAGAATCACTTGAACCCGGGAGG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGTGCTGGTCTAGCATCTaGCATGAACTCTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMCWSSI*HELFPE
Trigger: CTCTGGAAAGAGTTCATGTCAGATGCTAGACCAGCA...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGGGACAAAGGTTCTTTTaGGTTTGCTGGCTGTTAATT +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEGQRFF*VCWLLI
Trigger: AATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCC...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGTTTCACAGCGCTCAGTaGCTGCTGGTCATTAAATGG +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMFHSAQ*LLVIKW
Trigger: CCATTTAATGACCAGCAGTCACTGAGCGCTGTGAAA...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGTCTAGAAGGTTACTGTaGACCTTTCAGAAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTESRRLL*TFQKSG
Trigger: TCCACTTTTCTGAAAGGTTCACAGTAACCTTCTAGA...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCCCAGTCAAAACTCCTaGCAAATGTCCACAAAATTG +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCPSQNS*QMSTKL
Trigger: CAATTTTGTGGACATTTGGCAGGAGTTTTGACTGGG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCAGCTTGAAGAGGACTaGAACTCTCCCCTCACGAAT +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDQLEED*NSPLTN
Trigger: ATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGACAGCGCTCAGTGACTaGTGGTCATTAAATGGGGAT +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMTALSD*WSLNGD
Trigger: ATCCCCATTTAATGACCAGCAGTCACTGAGCGCTGT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACAGAGCCTTTGTTGTTaGTTTGCTGTACTTTGGTAC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSQSLCC*FAVLWY
Trigger: GTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACATGATAGACCCCTCTaGAAATACAGAGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSHDRPL*KYRAFV
Trigger: AACAAAGGCTCTGTATTTGCAGAGGGGTCTATCATG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGGTGATGCAGTTTCCGTaGTCACTCTCACCAAGAACT +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLVMQFP*SLSPRT
Trigger: AGTTCTTGGTGAGAGTGACCACGGAAACTGCATCAC...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGTTGTGCCTAAAACTTTaGCTGATACAAAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTELCLKL*LIQRNP
Trigger: CGGGTTTCTTTGTATCAGCCAAAGTTTTAGGCACAA...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTCACAAGTGTGTTCATaGACCCATAAGAACCAGGAT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSSQVCS*THKNQD
Trigger: ATCCTGGTTCTTATGGGTCCATGAACACACTTGTGA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCTCTATTGCCCAGGGTaGAGTGCAATAGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLLYCPG*SAIVQS
Trigger: AGATTGCACTATTGCACTCCACCCTGGGCAATAGAG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTCCCCTCCAGGGCTATaGGGCCCAAAGGGAAACATG +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEISPPGL*GPKGNM
Trigger: CATGTTTCCCTTTGGGCCCCATAGCCCTGGAGGGGA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377724.8
3UTR CAA 72 bp AAGACTGGAATTCAAGTCCTAACTCTGCCACTAACTTaGCAGGATGACCTTAGGCAAGTCATGTCACTTCTC +
Preference number: 4 (lower is better)
Translates to: KTGIQVLTLPLT*QDDLRQVMSLL
Trigger: GAGAAGTGACATGACTTGCCTAAGGTCATCCTGCAAAGTTAGTGGCAGAGTTAGGACTTGAATTCCAGTCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTTAACCTCATTCGCATaGGAAAACGTGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSLTSFA*ENVCER
Trigger: TCTTTCACACACGTTTTCTCATGCGAATGAGGTTAA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACACTATGATGACAAGGTaGGCCAGAAACTCTAGGACC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDTMMTR*ARNSRT
Trigger: GGTCCTAGAGTTTCTGGCTCACCTTGTCATCATAGT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACTTGGAGATGCCTGTATaGTGCTGGATGACCAAGTAC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDLEMPV*CWMTKY
Trigger: GTACTTGGTCATCCAGCATCATACAGGCATCTCCAA...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAGTCAGCCTTGTGCTTaGGTCCTGCTTTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNISQPCA*VLLYAC
Trigger: GCAAGCATAAAGCAGGACTCAAGCACAAGGCTGACT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACTCTATAAATGTGTGTaGATAGTTAGTTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSLYKCV*IVSWQV
Trigger: GACCTGCCAACTAACTATTCACACACATTTATAGAG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGGACAAAGGTTCTTTTaGGTTTGCTGGCTGTTAATT +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSGQRFF*VCWLLI
Trigger: AATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCACTACCACATATTCTaGCAAATAAGGGAAACACTA +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEHYHIF*QIRETL
Trigger: TAGTGTTTCCCTTATTTGTCAGAATATGTGGTAGTG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATGTATACCTCAGGGCTaGGAGAATCACTTTATAACA +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSCIPQG*ENHFIT
Trigger: TGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGCTTGTGCTTGAGTCCTaGTTTATGCTTGCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMLVLES*FMLACF
Trigger: GAAACACGCAAGCATAAAGCAGGACTCAAGCACAAG...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGTTTGAATCCCAGTGCTaGCACTCACTGCTAACTCTA +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMFESQC*HSLLTL
Trigger: TAGAGTTAGCAGTGAGTGGCAGCACTGGGATTCAAA...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAGAACTGGAGTTCAGTaGCACAGATCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNIRTGVQ*HRSAGA
Trigger: TGCTCCTGCTGATCTGTGCCACTGAACTCCAGTTCT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGAATGACCAGAAGAACTaGAGTTCAGTGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMNDQKN*SSVAQI
Trigger: GATCTGTGCCACTGAACTCCAGTTCTTCTGGTCATT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCAGGCTAGAGTACAGTaGTGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIQARVQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCACCACTGTACTCTAGCCTG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAGTAAGCACAGGCTTTaGACAAGACACAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDSKHRL*TRHKPG
Trigger: CCCAGGTTTGTGTCTTGTCCAAAGCCTGTGCTTACT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTGCTTTGCTGTACTTTaGTACCTTGCTGTTTATTCC +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSCFAVL*YLAVYS
Trigger: GGAATAAACAGCAAGGTACCAAAGTACAGCAAAGCA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 72 bp AGCATGATAGACCCCTCTGCAAATACAGAGCCTTTGTaGTTGCTTTGCTGTACTTTGGTACCTTGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SMIDPSANTEPL*LLCCTLVPCCL
Trigger: TAAACAGCAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 72 bp AAAAGCATGATAGACCCCTCTGCAAATACAGAGCCTTaGTTGTTGCTTTGCTGTACTTTGGTACCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KSMIDPSANTEP*LLLCCTLVPCC
Trigger: ACAGCAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCATGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACTTCACCCAGCTAGTGTaGCCATGTAAAGTGCATACT +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDFTQLV*PCKVHT
Trigger: AGTATGCACTTTACATGGTCACACTAGCTGGGTGAA...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAGAAACTCCTTCTCTTTaGGAGGCTCGTGACATGTGT +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNIETPSL*EARDMC
Trigger: ACACATGTCACGAGCCTCTCAAAGAGAAGGAGTTTC...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGCTCAGGGAAGAAAAATaGGTAAACCCCTACCTCTTT +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMLREEK*VNPYLF
Trigger: AAAGAGGTAGGGGTTTACTCATTTTTCTTCCCTGAG...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATCCTTGCTAACTTTTTaGTCATCACCATATCTCAAG +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSSLLTF*SSPYLK
Trigger: CTTGAGATATGGTGATGATCAAAAAGTTAGCAAGGA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCACTACCACATATTCTaGCAAATAAGGGAAACACTA +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCHYHIF*QIRETL
Trigger: TAGTGTTTCCCTTATTTGTCAGAATATGTGGTAGTG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCACCTCAGAACCTACTaGGAAAAGTTTCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDHLRTY*EKFLGI
Trigger: GATACCCAGAAACTTTTCTCAGTAGGTTCTGAGGTG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAGAACAGTCAGCCTTGTaGTTGAGTCCTGCTTTATGC +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNIEQSAL*LSPALC
Trigger: GCATAAAGCAGGACTCAAGCACAAGGCTGACTGTTC...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATTCTTGCTCTTAAAATaGGATAGCTGCCTACTTCTA +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSFLLLK*DSCLLL
Trigger: TAGAAGTAGGCAGCTATCCCATTTTAAGAGCAAGAA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTTTCTTGCTCTTAAAATaGGATAGCTGCCTACTTCTA +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCFLLLK*DSCLLL
Trigger: TAGAAGTAGGCAGCTATCCCATTTTAAGAGCAAGAA...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGATGAACTTGATGAAGTaGTCAAATCTGAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEMNLMK*SNLNLK
Trigger: CTTCAAGTTCAGATTTGACCACTTCATCAAGTTCAT...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTAATCTGACAATGTGTTaGAGAGAACTTTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCNLTMC*RELCCQ
Trigger: CTGACAACAAAGTTCTCTCCAACACATTGTCAGATT...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGTCAATTCTAATGTCATaGGTTTCTCCTACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLSILMS*VSPTPV
Trigger: GACTGGGGTAGGAGAAACCCATGACATTAGAATTGA...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGATGTTTGAGAACCAGTaGCCTAAAGAGAATGCAACC +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLMFENQ*PKENAT
Trigger: GGTTGCATTCTCTTTAGGCCACTGGTTCTCAAACAT...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGAAGGAATTAGAAGACTaGAATTCAAGTCCTAACTCT +
Preference number: 4 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEKELED*NSSPNS
Trigger: AGAGTTAGGACTTGAATTCCAGTCTTCTAATTCCTT...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCAGCCTAGGCTTTAACTaGGAGTTTCTATTATCTAGA +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSSLGFN*EFLLSR
Trigger: TCTAGATAATAGAAACTCCCAGTTAAAGCCTAGGCT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTATCATCACTGTTGCTTaGGCACCGAAGAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIIITVA*APKKSG
Trigger: GCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGAT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGTGTATACCTCAGGGCTaGGAGAATCACTTTATAACA +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLCIPQG*ENHFIT
Trigger: TGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACA...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGTCTAGAAGGTTACTGTaGACCTTTCAGAAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLSRRLL*TFQKSG
Trigger: TCCACTTTTCTGAAAGGTTCACAGTAACCTTCTAGA...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTTTTCAACAACCAATATaGCAATATCCAACTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCFQQPI*QYPTSR
Trigger: CCTAGAAGTTGGATATTGGCATATTGGTTGTTGAAA...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTTGCCCAGGGTGGAGTaGAATAGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEILPRVE*NSAILA
Trigger: AGCCAAGATTGCACTATTGCACTCCACCCTGGGCAA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAAATAGACGTCTCTTCTaGTTTAGCCATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSNRRLF*FSHFIF
Trigger: GAAAATGAAATGGCTAAAGCAGAAGAGACGTCTATT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAAACAAAATATACATGTaGTTTGGGCTTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSNKIYM*FGLLRK
Trigger: TTTCCTCAGAAGCCCAAAGCACATGTATATTTTGTT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCATGTACTTTGGTACCTTaGTGTTTATTCCTTAGTCTA +
Preference number: 4 (lower is better)
Translates to: TTHVEETARKLLFKVEQSCTLVP*CLFLSL
Trigger: TAGACTAAGGAATAAACAGCAAGGTACCAAAGTACA...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAATGACCAGAAGAACTaGAGTTCAGTGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNINDQKN*SSVAQI
Trigger: GATCTGTGCCACTGAACTCCAGTTCTTCTGGTCATT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACTCAATTCTAATGTCATaGGTTTCTCCTACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDSILMS*VSPTPV
Trigger: GACTGGGGTAGGAGAAACCCATGACATTAGAATTGA...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCAAGGAATTAGAAGACTaGAATTCAAGTCCTAACTCT +
Preference number: 4 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSKELED*NSSPNS
Trigger: AGAGTTAGGACTTGAATTCCAGTCTTCTAATTCCTT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGATATCCAGAGGACGTTaGAATCAACATTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLISRGR*NQHFGT
Trigger: TGTTCCAAAATGTTGATTTCAACGTCCTCTGGATAT...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAAGACTATTTCGTGGTaGAACTCCTTCTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDKTISW*NSFSLR
Trigger: TCTCAAAGAGAAGGAGTTTCACCACGAAATAGTCTT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCTCTATAAATGTGTGTaGATAGTTAGTTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDLYKCV*IVSWQV
Trigger: GACCTGCCAACTAACTATTCACACACATTTATAGAG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGTCCTTGCTAACTTTTTaGTCATCACCATATCTCAAG +
Preference number: 4 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMSLLTF*SSPYLK
Trigger: CTTGAGATATGGTGATGATCAAAAAGTTAGCAAGGA...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTTTCACAGCGCTCAGTaGCTGCTGGTCATTAAATGG +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIFHSAQ*LLVIKW
Trigger: CCATTTAATGACCAGCAGTCACTGAGCGCTGTGAAA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACATCTACTCCCATGCCTaGCTTTCTAAAATCTATTGG +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDIYSHA*LSKIYW
Trigger: CCAATAGATTTTAGAAAGGCAGGCATGGGAGTAGAT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATACAGAGCCTTTGTTGTTaGTTTGCTGTACTTTGGTAC +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNIQSLCC*FAVLWY
Trigger: GTACCAAAGTACAGCAAAGCAACAACAAAGGCTCTG...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATATCACAAGTGTGTTCATaGACCCATAAGAACCAGGAT +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNISQVCS*THKNQD
Trigger: ATCCTGGTTCTTATGGGTCCATGAACACACTTGTGA...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
3UTR CAA 72 bp TTAATCTTTCTGACCCACTATTACCTCCAAATTAAATaGGGGCTCATTCCACCTACCCTGCAAGTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: LIFLTHYYLQIK*GLIPPTLQVFV
Trigger: CACAAAAACTTGCAGGGTAGGTGGAATGAGCCCCAATTTAATTTGGAGGTAATAGTGGGTCAGAAAGATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCACCTCAGAACCTACTaGGAAAAGTTTCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIHLRTY*EKFLGI
Trigger: GATACCCAGAAACTTTTCTCAGTAGGTTCTGAGGTG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGTGTGACCATGTAAAGTaGATACTTTGGTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLCDHVK*ILWCSI
Trigger: AATTGAACACCAAAGTATGCACTTTACATGGTCACA...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAGGCGTGTACCAACATaGCCATCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDRRVPT*PSNFCI
Trigger: AATACAAAAATTAGATGGGCATGTTGGTACACGCCT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTAATCCCATAGCCATGTaGGGAAGAAATCATTCGTCC +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEINPIAM*GRNHSS
Trigger: GGACGAATGATTTCTTCCCCACATGGCTATGGGATT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAATCTGACAATGTGTTaGAGAGAACTTTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDNLTMC*RELCCQ
Trigger: CTGACAACAAAGTTCTCTCCAACACATTGTCAGATT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAGCCTAGGCTTTAACTaGGAGTTTCTATTATCTAGA +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDSLGFN*EFLLSR
Trigger: TCTAGATAATAGAAACTCCCAGTTAAAGCCTAGGCT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAATATCCAGAGGACGTTaGAATCAACATTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: LRQMILYTSGLRESLYNIISRGR*NQHFGT
Trigger: TGTTCCAAAATGTTGATTTCAACGTCCTCTGGATAT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR TCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCTACCTCTTTACTCTTaGTTCCTCTTCCACCCTAAT +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEILPLYS*FLFHPN
Trigger: ATTAGGGTGGAAGAGGAATCAAGAGTAAAGAGGTAG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACTGTGACCATGTAAAGTaGATACTTTGGTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDCDHVK*ILWCSI
Trigger: AATTGAACACCAAAGTATGCACTTTACATGGTCACA...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCCCAGTCAAAACTCCTaGCAAATGTCCACAAAATTG +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIPSQNS*QMSTKL
Trigger: CAATTTTGTGGACATTTGGCAGGAGTTTTGACTGGG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACAACAAAATATACATGTaGTTTGGGCTTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDNKIYM*FGLLRK
Trigger: TTTCCTCAGAAGCCCAAAGCACATGTATATTTTGTT...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTATGTTTGAGAACCAGTaGCCTAAAGAGAATGCAACC +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIMFENQ*PKENAT
Trigger: GGTTGCATTCTCTTTAGGCCACTGGTTCTCAAACAT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTGCTTTGCTGTACTTTaGTACCTTGCTGTTTATTCC +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEICFAVL*YLAVYS
Trigger: GGAATAAACAGCAAGGTACCAAAGTACAGCAAAGCA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTGTCCTGCTTTATGCTTaGGTGTTTCATAACAAAACA +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIVLLYA*VFHNKT
Trigger: TGTTTTGTTATGAAACACGCAAGCATAAAGCAGGAC...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTAGGCGTGTACCAACATaGCCATCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIRRVPT*PSNFCI
Trigger: AATACAAAAATTAGATGGGCATGTTGGTACACGCCT...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR GCA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTGTACTTTGGTACCTTaGTGTTTATTCCTTAGTCTA +
Preference number: 4 (lower is better)
Translates to: IFIPSSFTREQRNGNFEICTLVP*CLFLSL
Trigger: TAGACTAAGGAATAAACAGCAAGGTACCAAAGTACA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS CCA 90 bp AGCACTGACCCGTCGGGCGAGTACTCGAGGTTGAAGACGGCGCCGTaGGTGCGGGTGCTGAGGTACACCGAGTCCGCGGGGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: STDPSGEYSRLKTAP*VRVLRYTESAGWME
Trigger: TTCCATCCACCCCGCGGACTCGGTGTACCTCAGCACCCGCACCCACGGCGCCGTCTTCAACCTCGAGTACTCGCCCGACGGGTCAGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR CAA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCCGGGGCGGAGGCAGTaGAGGACTCCGGAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEPGRRQ*RTPELQ
Trigger: CTGGAGCTCCGGAGTCCTCAACTGCCTCCGCCCCGG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR CAA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAGGTGACAGAGTTGGCTaGTCACACCTGGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGGDRVG*SHLAQG
Trigger: TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACC...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS GCA 90 bp GTTGAAGGTGGAGTGCTGCTGCCTGTACCTCCTCATCATCACTGTTaGTTGAGCACCGAAGAAGAGTGGCCCAGCCTTTTGGGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VEGGVLLPVPPHHHC*LSTEEEWPSLLGAA
Trigger: AGCTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGGTACAGGCAGCAGCACTCCACCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS TCA 90 bp CAGAAACAGGAGAGTCGAGAAGCAGGATCTCTAGCAGTATGCCCTTaGAGGCAGAGACTGCAGTCAGCGATCGGCCTAAGCTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: QKQESREAGSLAVCP*RQRLQSAIGLSSAH
Trigger: GTGTGCAGAGCTTAGGCCGATCGCTGACTGCAGTCTCTGCCTTCAAGGGCATACTGCTAGAGATCCTGCTTCTCGACTCTCCTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS GCA 90 bp TCACTGTTGCTTGAGCACCGAAGAAGAGTGGCCCAGCCTTTTGGGTaGAGCTGTAAGGACGTGATGCAGTTTCCGTGGTCACTCTCACCA +
Preference number: 5 (lower is better)
Translates to: SLLLEHRRRVAQPFG*SCKDVMQFPWSLSP
Trigger: TGGTGAGAGTGACCACGGAAACTGCATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
ENST00000478453.1
ENST00000483167.5
CDS-3UTR CAA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACTGTCGGCCCCGGCTCTaGGCCCTGCAGTCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDCRPRL*ALQSGP
Trigger: CGGGCCAGACTGCAGGGCCAAGAGCCGGGGCCGACA...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGGCGAGTACTCGAGGTaGAAGACGGCGCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSGEYSR*KTAPWV
Trigger: CACCCACGGCGCCGTCTTCAACCTCGAGTACTCGCC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS TCA 90 bp ACCGAAGAAGAGTGGCCCAGCCTTTTGGGTGCAGCTGTAAGGACGTaGTGCAGTTTCCGTGGTCACTCTCACCAAGAACTTCAGGGGTTA +
Preference number: 5 (lower is better)
Translates to: TEEEWPSLLGAAVRT*CSFRGHSHQELQGL
Trigger: TAACCCCTGAAGTTCTTGGTGAGAGTGACCACGGAAACTGCATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
ENST00000478453.1
ENST00000483167.5
CDS TCA 90 bp AAGCTCTGCACACACGGCAATGGCAATTTGTCCAATGAGCCCTGTTaGAGGTGGAGTGCTGCTGCCTGTACCTCCTCATCATCACTGTTG +
Preference number: 5 (lower is better)
Translates to: KLCTHGNGNLSNEPC*RWSAAACTSSSSLL
Trigger: CAACAGTGATGATGAGGAGGTACAGGCAGCAGCACTCCACCTTCAACAGGGCTCATTGGACAAATTGCCATTGCCGTGTGTGCAGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS CCA 90 bp GCCCAGCCTTTTGGGTGCAGCTGTAAGGACGTGATGCAGTTTCCGTaGTCACTCTCACCAAGAACTTCAGGGGTTACGACTTCAAGACTA +
Preference number: 5 (lower is better)
Translates to: AQPFGCSCKDVMQFP*SLSPRTSGVTTSRL
Trigger: TAGTCTTGAAGTCGTAACCCCTGAAGTTCTTGGTGAGAGTGACCACGGAAACTGCATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
ENST00000478453.1
ENST00000483167.5
CDS-3UTR CAA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCGAGTGGCCCAGCCTTTaGGGTGCAGCTGTAAGGACG +
Preference number: 5 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSEWPSL*GAAVRT
Trigger: CGTCCTTACAGCTGCACCCAAAAGGCTGGGCCACTC...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGATCCTCATCATCACTGTaGCTTGAGCACCGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGSSSSL*LEHRRR
Trigger: TCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGA...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGGTGACAGAGTTGGCTaGTCACACCTGGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSGDRVG*SHLAQG
Trigger: TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCGAATGGTGACAGAGTaGGCTTGTCACACCTGGCTC +
Preference number: 5 (lower is better)
Translates to: YDNSLKRTATLPSRMVTERMVTE*ACHTWL
Trigger: GAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGGTCATGGTGCGAAAATaGTCCCGCGCCGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMVMVRK*SRAGST
Trigger: CGTGGACCCGGCGCGGGACAATTTTCGCACCATGAC...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS CCA 90 bp TATGAGAGTACAGAGAACGGATCACCCGCAGGGGACTGGCTTCTTTaGGCAAGCAGTCAACAAGTTCACTGCACTGTTTGTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: YESTENGSPAGDWLL*ASSQQVHCTVCQIP
Trigger: TGGGATTTGACAAACAGTGCAGTGAACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCTGCGGGTGATCCGTTCTCTGTACTCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS CCA 90 bp CCACATCATTATGAGAGTACAGAGAACGGATCACCCGCAGGGGACTaGCTTCTTTGGGCAAGCAGTCAACAAGTTCACTGCACTGTTTGT +
Preference number: 5 (lower is better)
Translates to: PHHYESTENGSPAGD*LLWASSQQVHCTVC
Trigger: ACAAACAGTGCAGTGAACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCTGCGGGTGATCCGTTCTCTGTACTCTCATAATGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACAGGATCTGGCTCTATaGCCCAGGGTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSQDLAL*PRVECN
Trigger: ATTGCACTCCACCCTGGGCAATAGAGCCAGATCCTG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAGATATCCAGAGGACGTaGAAATCAACATTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGDIQRT*KSTFWN
Trigger: GTTCCAAAATGTTGATTTCAACGTCCTCTGGATATC...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAAGGGGACTGGCTTCTTaGGGCAAGCAGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSRGLAS*GKQSTS
Trigger: ACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp AACTCTCCCCTCACGAATGGTGACAGAGTTGGCTTGTCACACCTGGCTCAGGGAATAAGAACCAGGATCTaGACCCAAACTTATAAGATC +
Preference number: 5 (lower is better)
Translates to: NSPLTNGDRVGLSHLAQGIRTRI*TQTYKI
Trigger: GATCTTATAAGTTTGGGTCAAGATCCTGGTTCTTAT...TCCCTGAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCGTGAGGGGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCAGTCAGCCTTGTGCTaGAGTCCTGCTTTATGCTTG +
Preference number: 5 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCQSALC*SPALCL
Trigger: CAAGCATAAAGCAGGACTCAAGCACAAGGCTGACTG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS CCA 90 bp ACTGCACTGTTTGTCAAATCCCAACAAGCGAATCCCATAGCCATGTaGGGAAGAAATCATTCGTCCATCGGGGCTGAAGCAAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: TALFVKSQQANPIAM*GRNHSSIGAEAKFF
Trigger: AAAGAACTTTGCTTCAGCCCCGATGGACGAATGATTTCTTCCCCACATGGCTATGGGATTCGCTTGTTGGGATTTGACAAACAGTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS-3UTR CAA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGCACTGGAGCTCCTTCTaGGAATTCATAGACACAAGT +
Preference number: 5 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEHWSSF*EFIDTS
Trigger: ACTTGTGTCTATGAATTCCAAGAAGGAGCTCCAGTG...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGAGGGGACTGGCTTCTTaGGGCAAGCAGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMRGLAS*GKQSTS
Trigger: ACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp GAGAAGAATTTACTGCTGATTAAGGTTGTGTTTTTCAACCTGCAATCCCGAGACCGAATGGTGACAGAGTaGGCTTGTCACACCTGGCTC +
Preference number: 5 (lower is better)
Translates to: EKNLLLIKVVFFNLQSRDRMVTE*ACHTWL
Trigger: GAGCCAGGTGTGACAAGCCAACTCTGTCACCATTCG...GTCTCGGGATTGCAGGTTGAAAAACACAACCTTAATCAGCAGTAAATTCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCACTCTGCCACTAACTTaGCAGGATGACCTTAGGCAA +
Preference number: 5 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSTLPLT*QDDLRQ
Trigger: TTGCCTAAGGTCATCCTGCAAAGTTAGTGGCAGAGT...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTGAGTGGCCCAGCCTTTaGGGTGCAGCTGTAAGGACG +
Preference number: 5 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIEWPSL*GAAVRT
Trigger: CGTCCTTACAGCTGCACCCAAAAGGCTGGGCCACTC...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGCATCATCACTGTTGCTaGAGCACCGAAGAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLHHHCC*STEEEW
Trigger: CCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATG...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAAGTTCACTGCACTGTTaGTCAAATCCCAACAAGCGA +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSSSLHC*SNPNKR
Trigger: TCGCTTGTTGGGATTTGACAAACAGTGCAGTGAACT...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGGTTGTGCCTAAAACTTaGGCTGATACAAAGAAACCC +
Preference number: 5 (lower is better)
Translates to: YDNSLKRTATLPSRMVTEVVPKT*ADTKKP
Trigger: GGGTTTCTTTGTATCAGCCAAAGTTTTAGGCACAAC...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTCACCTGCCACCACGCTaGGCTATGATTTTTGTATTT +
Preference number: 5 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCHLPPR*AMIFVF
Trigger: AAATACAAAAATCATAGCCAAGCGTGGTGGCAGGTG...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCACACCTGCCACCACGCTaGGCTATGATTTTTGTATTT +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSHLPPR*AMIFVF
Trigger: AAATACAAAAATCATAGCCAAGCGTGGTGGCAGGTG...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTGCCTTTGTTGTTGCTTaGCTGTACTTTGGTACCTTG +
Preference number: 5 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCAFVVA*LYFGTL
Trigger: CAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGC...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGCCTTTGTTGTTGCTTaGCTGTACTTTGGTACCTTG +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSAFVVA*LYFGTL
Trigger: CAAGGTACCAAAGTACAGCAAAGCAACAACAAAGGC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS TCA 90 bp CTAAAACTTTGGCTGATACAAAGAAACCCGTCCACTAAGGCACCCTaGGGCAATCTGACAATGTGTTGGAGAGAACTTTGTTGTCAGTAC +
Preference number: 5 (lower is better)
Translates to: LKLWLIQRNPSTKAP*GNLTMCWRELCCQY
Trigger: GTACTGACAACAAAGTTCTCTCCAACACATTGTCAGATTGCCTCAGGGTGCCTTAGTGGACGGGTTTCTTTGTATCAGCCAAAGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000483167.5
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGTTGTGCCTAAAACTTaGGCTGATACAAAGAAACCC +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSVVPKT*ADTKKP
Trigger: GGGTTTCTTTGTATCAGCCAAAGTTTTAGGCACAAC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGACTCTGCCACTAACTTaGCAGGATGACCTTAGGCAA +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMTLPLT*QDDLRQ
Trigger: TTGCCTAAGGTCATCCTGCAAAGTTAGTGGCAGAGT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAGACACAAACCTGGGTTaGAATCCCAGTGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LRQMILYTSGLRESLYNIDTNLG*NPSAAT
Trigger: AGTGGCAGCACTGGGATTCAAACCCAGGTTTGTGTC...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTACAGAGCCTTTGTTGTaGCTTTGCTGTACTTTGGTA +
Preference number: 5 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCTEPLL*LCCTLV
Trigger: TACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGT...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TATGATAACAGCTTGAAGAGGACTGCAACTCTCCCCTCACGAATGGTGACAGAGAATACAGAGCCTTTGTaGTTGCTTTGCTGTACTTTG +
Preference number: 5 (lower is better)
Translates to: YDNSLKRTATLPSRMVTENTEPL*LLCCTL
Trigger: CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATT...CTCTGTCACCATTCGTGAGGGGAGAGTTGCAGTCCTCTTCAAGCTGTTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ACCACCCATGTGGAGGAGACTGCAAGGAAGCTGTTATTCAAAGTAGAACAGTCAGCAAATACAGAGCCTTaGTTGTTGCTTTGCTGTACT +
Preference number: 5 (lower is better)
Translates to: TTHVEETARKLLFKVEQSANTEP*LLLCCT
Trigger: AGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGC...TGACTGTTCTACTTTGAATAACAGCTTCCTTGCAGTCTCCTCCACATGGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGAGTTCACTGCACTGTTaGTCAAATCCCAACAAGCGA +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMSSLHC*SNPNKR
Trigger: TCGCTTGTTGGGATTTGACAAACAGTGCAGTGAACT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGAAATCGCTCCAGCCTTaGGTAATCCCTTCTAAACAC +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMKSLQP*VIPSKH
Trigger: GTGTTTAGAAGGGATTACCAAAGGCTGGAGCGATTT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCAGGATCTGGCTCTATaGCCCAGGGTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIQDLAL*PRVECN
Trigger: ATTGCACTCCACCCTGGGCAATAGAGCCAGATCCTG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTAGGACAAAGGTTCTTTaGAGTTTGCTGGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCRTKVL*SLLAVN
Trigger: ATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCCT...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTAAAGAGAATGCAACCTAAGAGGGCAAGGCTAGTGCATAGCTTAAATCGCTCCTTGCTTTGCTGTACTTaGGTACCTTGCTGTTTATTC +
Preference number: 5 (lower is better)
Translates to: LKRMQPKRARLVHSLNRSLLCCT*VPCCLF
Trigger: GAATAAACAGCAAGGTACCAAAGTACAGCAAAGCAA...GGAGCGATTTAAGCTATGCACTAGCCTTGCCCTCTTAGGTTGCATTCTCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTAATACAGAGCCTTTGTaGTTGCTTTGCTGTACTTTG +
Preference number: 5 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCNTEPL*LLCCTL
Trigger: CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATT...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTTGGAGATGCCTGTATGATGCTGGATGACCAAGTACTAAGGTCACAAGTGTGTTTGGAGAGAACTTTGTaGTCAGTACCACATCATTAT +
Preference number: 5 (lower is better)
Translates to: LGDACMMLDDQVLRSQVCLERTL*SVPHHY
Trigger: ATAATGATGTGGTACTGACAACAAAGTTCTCTCCAA...ACACACTTGTGACCTTAGTACTTGGTCATCCAGCATCATACAGGCATCTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGGTGTTGGAGAGAACTTaGTTGTCAGTACCACATCAT +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMVLERT*LSVPHH
Trigger: ATGATGTGGTACTGACAACAAAGTTCTCTCCAACAC...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ATGATAGACCCCTCTGCAAATACAGAGCCTTTGTTGTTGCTTTGCTGTACTTTGGTGTTGGAGAGAACTTaGTTGTCAGTACCACATCAT +
Preference number: 5 (lower is better)
Translates to: MIDPSANTEPLLLLCCTLVLERT*LSVPHH
Trigger: ATGATGTGGTACTGACAACAAAGTTCTCTCCAACAC...CAAAGTACAGCAAAGCAACAACAAAGGCTCTGTATTTGCAGAGGGGTCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGACTTATGATAACAGCTaGAAGAGGACTGCAACTCTC +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMTYDNS*KRTATL
Trigger: GAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAGT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTGACACAAACCTGGGTTaGAATCCCAGTGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIDTNLG*NPSAAT
Trigger: AGTGGCAGCACTGGGATTCAAACCCAGGTTTGTGTC...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATACACTGGAGCTCCTTCTaGGAATTCATAGACACAAGT +
Preference number: 5 (lower is better)
Translates to: LRQMILYTSGLRESLYNIHWSSF*EFIDTS
Trigger: ACTTGTGTCTATGAATTCCAAGAAGGAGCTCCAGTG...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTCAGTCAGCCTTGTGCTaGAGTCCTGCTTTATGCTTG +
Preference number: 5 (lower is better)
Translates to: IFIPSSFTREQRNGNFEIQSALC*SPALCL
Trigger: CAAGCATAAAGCAGGACTCAAGCACAAGGCTGACTG...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAAAATCGCTCCAGCCTTaGGTAATCCCTTCTAAACAC +
Preference number: 5 (lower is better)
Translates to: LRQMILYTSGLRESLYNIKSLQP*VIPSKH
Trigger: GTGTTTAGAAGGGATTACCAAAGGCTGGAGCGATTT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGAGGACAAAGGTTCTTTaGAGTTTGCTGGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMRTKVL*SLLAVN
Trigger: ATTAACAGCCAGCAAACTCAAAAGAACCTTTGTCCT...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGTTGCTTTGCTGTACTTaGGTACCTTGCTGTTTATTC +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMLLCCT*VPCCLF
Trigger: GAATAAACAGCAAGGTACCAAAGTACAGCAAAGCAA...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp ATCTTTATCCCTAGTTCATTTACAAGAGAGCAGCGTAATGGTAACTTTGAGATTTCCTCATCATCACTGTaGCTTGAGCACCGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: IFIPSSFTREQRNGNFEISSSSL*LEHRRR
Trigger: TCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGA...AATCTCAAAGTTACCATTACGCTGCTCTCTTGTAAATGAACTAGGGATAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp TTCAATTCTAATGTCATGGGTTTCTCCTACCCCAGTCAAAACTCCTGCCAAATGTTGGAGAGAACTTTGTaGTCAGTACCACATCATTAT +
Preference number: 5 (lower is better)
Translates to: FNSNVMGFSYPSQNSCQMLERTL*SVPHHY
Trigger: ATAATGATGTGGTACTGACAACAAAGTTCTCTCCAA...CATTTGGCAGGAGTTTTGACTGGGGTAGGAGAAACCCATGACATTAGAATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAACTTATGATAACAGCTaGAAGAGGACTGCAACTCTC +
Preference number: 5 (lower is better)
Translates to: LRQMILYTSGLRESLYNITYDNS*KRTATL
Trigger: GAGAGTTGCAGTCCTCTTCAAGCTGTTATCATAAGT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAACAGAGCCTTTGTTGTaGCTTTGCTGTACTTTGGTA +
Preference number: 5 (lower is better)
Translates to: LRQMILYTSGLRESLYNITEPLL*LCCTLV
Trigger: TACCAAAGTACAGCAAAGCAACAACAAAGGCTCTGT...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS TCA 90 bp TTGGAACAATCTGGTGTTAACCTCATTCGCATGAGAAAACGTGTGTaGAAGAATTTCTTATGTGGACACCCATCTTCTGTATACCTGTTA +
Preference number: 5 (lower is better)
Translates to: LEQSGVNLIRMRKRV*KNFLCGHPSSVYLL
Trigger: TAACAGGTATACAGAAGATGGGTGTCCACATAAGAAATTCTTTCACACACGTTTTCTCATGCGAATGAGGTTAACACCAGATTGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS TCA 90 bp TTGGAACAATCTGGTGTTAACCTCATTCGCATGAGAAAACGTGTGTaGAAGAATTTCTTATGTGGACACCCATCTTCTGTATACCTGATA +
Preference number: 5 (lower is better)
Translates to: LEQSGVNLIRMRKRV*KNFLCGHPSSVYLI
Trigger: TATCAGGTATACAGAAGATGGGTGTCCACATAAGAAATTCTTTCACACACGTTTTCTCATGCGAATGAGGTTAACACCAGATTGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS-3UTR CAA 90 bp CTGAGGCAAATGATTCTGTATACCTCAGGGCTGAGAGAATCACTTTATAACATAGATATCCAGAGGACGTaGAAATCAACATTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: LRQMILYTSGLRESLYNIDIQRT*KSTFWN
Trigger: GTTCCAAAATGTTGATTTCAACGTCCTCTGGATATC...TATGTTATAAAGTGATTCTCTCAGCCCTGAGGTATACAGAATCATTTGCCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242323.8
ENST00000377724.8
CDS TCA 90 bp TTGAAATCAACATTTTGGAACAATCTGGTGTTAACCTCATTCGCATaGGAAAACGTGTGTGAAAGAATTTCTTATGTGGACACCCATCTT +
Preference number: 5 (lower is better)
Translates to: LKSTFWNNLVLTSFA*ENVCERISYVDTHL
Trigger: AAGATGGGTGTCCACATAAGAAATTCTTTCACACACGTTTTCTCATGCGAATGAGGTTAACACCAGATTGTTCCAAAATGTTGATTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
CDS TCA 90 bp AAATTGAAGCAATTCCTAAGTCAAACACCAGAAGAGTTCCTTATTTaGTGTAAGTTGTGCCTAAAACTTTGGCTGATACAAAGAAACCCG +
Preference number: 5 (lower is better)
Translates to: KLKQFLSQTPEEFLI*CKLCLKLWLIQRNP
Trigger: CGGGTTTCTTTGTATCAGCCAAAGTTTTAGGCACAACTTACATCAAATAAGGAACTCTTCTGGTGTTTGACTTAGGAATTGCTTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000483167.5
CDS CCA 72 bp CCGTCGGGCGAGTACTCGAGGTTGAAGACGGCGCCGTaGGTGCGGGTGCTGAGGTACACCGAGTCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: PSGEYSRLKTAP*VRVLRYTESAG
Trigger: CCCCGCGGACTCGGTGTACCTCAGCACCCGCACCCACGGCGCCGTCTTCAACCTCGAGTACTCGCCCGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS CAA 72 bp ACTGTCAGCACTGACCCGTCGGGCGAGTACTCGAGGTaGAAGACGGCGCCGTGGGTGCGGGTGCTGAGGTAC +
Preference number: 6 (lower is better)
Translates to: TVSTDPSGEYSR*KTAPWVRVLRY
Trigger: GTACCTCAGCACCCGCACCCACGGCGCCGTCTTCAACCTCGAGTACTCGCCCGACGGGTCAGTGCTGACAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377724.8
CDS CAA 90 bp GAAGGTGGAGTGCTGCTGCCTGTACCTCCTCATCATCACTGTTGCTaGAGCACCGAAGAAGAGTGGCCCAGCCTTTTGGGTGCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: EGGVLLPVPPHHHCC*STEEEWPSLLGAAV
Trigger: TACAGCTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGGTACAGGCAGCAGCACTCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS TCA 72 bp GAGAGTCGAGAAGCAGGATCTCTAGCAGTATGCCCTTaGAGGCAGAGACTGCAGTCAGCGATCGGCCTAAGC +
Preference number: 6 (lower is better)
Translates to: ESREAGSLAVCP*RQRLQSAIGLS
Trigger: GCTTAGGCCGATCGCTGACTGCAGTCTCTGCCTTCAAGGGCATACTGCTAGAGATCCTGCTTCTCGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS GCA 72 bp CTTGAGCACCGAAGAAGAGTGGCCCAGCCTTTTGGGTaGAGCTGTAAGGACGTGATGCAGTTTCCGTGGTCA +
Preference number: 6 (lower is better)
Translates to: LEHRRRVAQPFG*SCKDVMQFPWS
Trigger: TGACCACGGAAACTGCATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
ENST00000478453.1
ENST00000483167.5
CDS GCA 72 bp GGAGTGCTGCTGCCTGTACCTCCTCATCATCACTGTTaGTTGAGCACCGAAGAAGAGTGGCCCAGCCTTTTG +
Preference number: 6 (lower is better)
Translates to: GVLLPVPPHHHC*LSTEEEWPSLL
Trigger: CAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGGTACAGGCAGCAGCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS GCA 72 bp AAGGCAGAGACTGCAGTCAGCGATCGGCCTAAGCTCTaGACACACGGCAATGGCAATTTGTCCAATGAGCCC +
Preference number: 6 (lower is better)
Translates to: KAETAVSDRPKL*THGNGNLSNEP
Trigger: GGGCTCATTGGACAAATTGCCATTGCCGTGTGTGCAGAGCTTAGGCCGATCGCTGACTGCAGTCTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS CAA 72 bp GTGCTGCTGCCTGTACCTCCTCATCATCACTGTTGCTaGAGCACCGAAGAAGAGTGGCCCAGCCTTTTGGGT +
Preference number: 6 (lower is better)
Translates to: VLLPVPPHHHCC*STEEEWPSLLG
Trigger: ACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGGTACAGGCAGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS CAA 72 bp GGAGAGTCGAGAAGCAGGATCTCTAGCAGTATGCCCTaGAAGGCAGAGACTGCAGTCAGCGATCGGCCTAAG +
Preference number: 6 (lower is better)
Translates to: GESRSRISSSMP*KAETAVSDRPK
Trigger: CTTAGGCCGATCGCTGACTGCAGTCTCTGCCTTCAAGGGCATACTGCTAGAGATCCTGCTTCTCGACTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS CAA 72 bp TGGAGTGCTGCTGCCTGTACCTCCTCATCATCACTGTaGCTTGAGCACCGAAGAAGAGTGGCCCAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: WSAAACTSSSSL*LEHRRRVAQPF
Trigger: AAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGGTACAGGCAGCAGCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS CAA 90 bp ACAGAAACAGGAGAGTCGAGAAGCAGGATCTCTAGCAGTATGCCCTaGAAGGCAGAGACTGCAGTCAGCGATCGGCCTAAGCTCTGCACA +
Preference number: 6 (lower is better)
Translates to: TETGESRSRISSSMP*KAETAVSDRPKLCT
Trigger: TGTGCAGAGCTTAGGCCGATCGCTGACTGCAGTCTCTGCCTTCAAGGGCATACTGCTAGAGATCCTGCTTCTCGACTCTCCTGTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS CCA 72 bp ACAGAGAACGGATCACCCGCAGGGGACTGGCTTCTTTaGGCAAGCAGTCAACAAGTTCACTGCACTGTTTGT +
Preference number: 6 (lower is better)
Translates to: TENGSPAGDWLL*ASSQQVHCTVC
Trigger: ACAAACAGTGCAGTGAACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCTGCGGGTGATCCGTTCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS CAA 72 bp TACAGAGAACGGATCACCCGCAGGGGACTGGCTTCTTaGGGCAAGCAGTCAACAAGTTCACTGCACTGTTTG +
Preference number: 6 (lower is better)
Translates to: YRERITRRGLAS*GKQSTSSLHCL
Trigger: CAAACAGTGCAGTGAACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCTGCGGGTGATCCGTTCTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS TCA 72 bp ATAGACACAAGTACACTCCTCATCATCACTGTTGCTTaGGCACCGAAGAAGAGTGGCCCAGCCTTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: IDTSTLLIITVA*APKKSGPAFWV
Trigger: CACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGTGTACTTGTGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS CAA 72 bp CATAGACACAAGTACACTCCTCATCATCACTGTTGCTaGAGCACCGAAGAAGAGTGGCCCAGCCTTTTGGGT +
Preference number: 6 (lower is better)
Translates to: HRHKYTPHHHCC*STEEEWPSLLG
Trigger: ACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGTGTACTTGTGTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS CCA 72 bp TTTGTCAAATCCCAACAAGCGAATCCCATAGCCATGTaGGGAAGAAATCATTCGTCCATCGGGGCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: FVKSQQANPIAM*GRNHSSIGAEA
Trigger: TGCTTCAGCCCCGATGGACGAATGATTTCTTCCCCACATGGCTATGGGATTCGCTTGTTGGGATTTGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS CAA 90 bp ACCTCCCACCTTGCTCAACCCCAGCAGGAGAGGAATAAGAAGAGTTaGGAAGGGATAATGATACCATATGAAGCAAGAGAGGACAGAAAC +
Preference number: 6 (lower is better)
Translates to: TSHLAQPQQERNKKS*EGIMIPYEAREDRN
Trigger: GTTTCTGTCCTCTCTTGCTTCATATGGTATCATTATCCCTTCCAAACTCTTCTTATTCCTCTCCTGCTGGGGTTGAGCAAGGTGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461549.1
CDS TCA 72 bp TGGCTGATACAAAGAAACCCGTCCACTAAGGCACCCTaGGGCAATCTGACAATGTGTTGGAGAGAACTTTGT +
Preference number: 6 (lower is better)
Translates to: WLIQRNPSTKAP*GNLTMCWRELC
Trigger: ACAAAGTTCTCTCCAACACATTGTCAGATTGCCTCAGGGTGCCTTAGTGGACGGGTTTCTTTGTATCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000483167.5
CDS GCA 72 bp ATTCATAGACACAAGTACACTCCTCATCATCACTGTTaGTTGAGCACCGAAGAAGAGTGGCCCAGCCTTTTG +
Preference number: 6 (lower is better)
Translates to: IHRHKYTPHHHC*LSTEEEWPSLL
Trigger: CAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGTGTACTTGTGTCTATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000478453.1
ENST00000483167.5
CDS TCA 72 bp TCTGGTGTTAACCTCATTCGCATGAGAAAACGTGTGTaGAAGAATTTCTTATGTGGACACCCATCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: SGVNLIRMRKRV*KNFLCGHPSSV
Trigger: TACAGAAGATGGGTGTCCACATAAGAAATTCTTTCACACACGTTTTCTCATGCGAATGAGGTTAACACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
CDS CAA 90 bp TCATGCAAAATTAAGAGATATCCAGAGGACGTTGAAATCAACATTTaGGAACAATCTGGTGTTAACCTCATTCGCATGAGAAAACGTGTG +
Preference number: 6 (lower is better)
Translates to: SCKIKRYPEDVEINI*EQSGVNLIRMRKRV
Trigger: CACACGTTTTCTCATGCGAATGAGGTTAACACCAGATTGTTCCAAAATGTTGATTTCAACGTCCTCTGGATATCTCTTAATTTTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
ENST00000483167.5
CDS TCA 72 bp ACATTTTGGAACAATCTGGTGTTAACCTCATTCGCATaGGAAAACGTGTGTGAAAGAATTTCTTATGTGGAC +
Preference number: 6 (lower is better)
Translates to: TFWNNLVLTSFA*ENVCERISYVD
Trigger: GTCCACATAAGAAATTCTTTCACACACGTTTTCTCATGCGAATGAGGTTAACACCAGATTGTTCCAAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
CDS CAA 72 bp ATTAAGAGATATCCAGAGGACGTTGAAATCAACATTTaGGAACAATCTGGTGTTAACCTCATTCGCATGAGA +
Preference number: 6 (lower is better)
Translates to: IKRYPEDVEINI*EQSGVNLIRMR
Trigger: TCTCATGCGAATGAGGTTAACACCAGATTGTTCCAAAATGTTGATTTCAACGTCCTCTGGATATCTCTTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
ENST00000483167.5
CDS CAA 72 bp CAAGGTCATGCAAAATTAAGAGATATCCAGAGGACGTaGAAATCAACATTTTGGAACAATCTGGTGTTAACC +
Preference number: 6 (lower is better)
Translates to: QGHAKLRDIQRT*KSTFWNNLVLT
Trigger: GGTTAACACCAGATTGTTCCAAAATGTTGATTTCAACGTCCTCTGGATATCTCTTAATTTTGCATGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242323.8
ENST00000377724.8
ENST00000461549.1
ENST00000483167.5