RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145041

Ensembl transcript IDs: ENST00000335891.5, ENST00000423656.5, ENST00000504652.5, ENST00000684031.1

Found 708 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACAGGAGTaGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: DTPPFQGSWYRQKQE*VLSCCRHTAVVFLQ
Trigger: CTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACTCCTGTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR GCA 90 bp GGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTaGTTAAAGACAAAAAGGCAACATGTGCCTCACTGGTGGTGTGCC +
Preference number: 1 (lower is better)
Translates to: GIQCPHPGFRPCLRC*LKTKRQHVPHWWCA
Trigger: GGCACACCACCAGTGAGGCACATGTTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR GCA 90 bp CAGGGTAGCTGGTACCGCCAGAAACAGGAGTGGGTCTTGTCCTGTTaGAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGC +
Preference number: 1 (lower is better)
Translates to: QGSWYRQKQEWVLSC*RHTAVVFLQLSNKR
Trigger: GCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACTCCTGTTTCTGGCGGTACCAGCTACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 90 bp GCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTaGGTCACAGGCCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAA +
Preference number: 1 (lower is better)
Translates to: AGTLQWFSCSSPTNA*VTGQSCLGMLLSPK
Trigger: TTTTGGACTTAACAACATACCAAGGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 90 bp TGCAGAGTAGGGCCTAGTCCCTGTTGTCATTTTTGTGGTGGTTATTaGTTCTGGAAGGACCCTCGGGTGCCAATGAGGCTCTCTAAGCCA +
Preference number: 1 (lower is better)
Translates to: CRVGPSPCCHFCGGY*FWKDPRVPMRLSKP
Trigger: TGGCTTAGAGAGCCTCATTGGCACCCGAGGGTCCTTCCAGAATCAATAACCACCACAAAAATGACAACAGGGACTAGGCCCTACTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR CCA 90 bp CTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCTTaGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCT +
Preference number: 1 (lower is better)
Translates to: LQLSNKRLSHRPELP*YVVKSKTSSLGYLS
Trigger: AGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 90 bp ATTTTTGTGGTGGTTATTGATTCTGGAAGGACCCTCGGGTGCCAATaGGGCTCTCTAAGCCATAATCTTCTGAATGCAGGGCATGCAGCT +
Preference number: 1 (lower is better)
Translates to: IFVVVIDSGRTLGCQ*GSLSHNLLNAGHAA
Trigger: AGCTGCATGCCCTGCATTCAGAAGATTATGGCTTAGAGAGCCTCATTGGCACCCGAGGGTCCTTCCAGAATCAATAACCACCACAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR TCA 90 bp TTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATaGAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: LLSPKLLLWATYLPS*SRCSGPGRIIYLPA
Trigger: AGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 90 bp AGACAGCCCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTaGCTCAGTTTCTCGCCTGCCAAGAATCTCTTCCAAGCAGTGATG +
Preference number: 1 (lower is better)
Translates to: RQPWEKEKGICSEFI*LSFSPAKNLFQAVM
Trigger: CATCACTGCTTGGAAGAGATTCTTGGCAGGCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGGGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR TCA 90 bp CTTAAAAGACAGACAGCCCTGGGAGAAAGAGAAGGGAATATGTTCTaGATTCATTTGACTCAGTTTCTCGCCTGCCAAGAATCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: LKRQTALGEREGNMF*IHLTQFLACQESLP
Trigger: TGGAAGAGATTCTTGGCAGGCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGGGCTGTCTGTCTTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR TCA 90 bp ATGCCTCTATATTGTTCTTTAGACATCATTTTCTTCCAAAGAAAATaGAGTGCAGGGACAAGAGACCTGGTGGATATAAGTTCATACCCT +
Preference number: 1 (lower is better)
Translates to: MPLYCSLDIIFFQRK*SAGTRDLVDISSYP
Trigger: AGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCTGCACTTCATTTTCTTTGGAAGAAAATGATGTCTAAAGAACAATATAGAGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR CAA 90 bp CCACCATTCCAGGGTAGCTGGTACCGCCAGAAACAGGAGTGGGTCTaGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: PPFQGSWYRQKQEWV*SCCRHTAVVFLQLS
Trigger: GGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACTCCTGTTTCTGGCGGTACCAGCTACCCTGGAATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCGCCTCACTGGTGGTGTaGCACTGTTCTCATGCTGCC +
Preference number: 2 (lower is better)
Translates to: SGFPAALQQTPESQARAAASLVV*HCSHAA
Trigger: GGCAGCATGAGAACAGTGGCACACCACCAGTGAGGC...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACATGAAGCAAAGAGCTaGGTGAGTCCTCTGCTCTCC +
Preference number: 2 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLHEAKS*VSPLLS
Trigger: GGAGAGCAGAGGACTCACTCAGCTCTTTGCTTCATG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR CAA 90 bp AGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTaGCTTAAAGACAAAAAGGCAACATGTGCCTCACTGGTGGTGTGC +
Preference number: 2 (lower is better)
Translates to: RHPVPPPRVQALSKV*LKDKKATCASLVVC
Trigger: GCACACCACCAGTGAGGCACATGTTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCATGCTGCCTCCTAAGTaGCTCCGATTTTCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGFPAALQQTPESQARAAMLPPK*LRFSAL
Trigger: CAGGGCTGAAAATCGGAGTCACTTAGGAGGCAGCAT...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCCAGCAGGGCTTTACCTaGCCCTGGAGAGTTTTAGCC +
Preference number: 2 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAQQGFT*PWRVLA
Trigger: GGCTAAAACTCTCCAGGGGCAGGTAAAGCCCTGCTG...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCAAAAAGGCAACATGTaGCTCACTGGTGGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNQKGNM*LTGGVP
Trigger: TGGCACACCACCAGTGAGGCACATGTTGCCTTTTTG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATGGGTCTTGTCCTGTTaGAGGCACACTGCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPWVLSC*RHTAVV
Trigger: AACCACTGCAGTGTGCCTGCAACAGGACAAGACCCA...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCATGAAGCAAAGAGCTaGGTGAGTCCTCTGCTCTCC +
Preference number: 2 (lower is better)
Translates to: QAHCSGFPAALQQTPESQHEAKS*VSPLLS
Trigger: GGAGAGCAGAGGACTCACTCAGCTCTTTGCTTCATG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCACTGCCAAGTTTTGGTaGGGAGTAACACCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: SGFPAALQQTPESQARAATAKFW*GVTPWH
Trigger: ATGCCAGGGTGTTACTCCTCACCAAAACTTGGCAGT...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGGCTTTACCTGCCCCTaGAGAGTTTTAGCCGTCTTG +
Preference number: 2 (lower is better)
Translates to: QAHCSGFPAALQQTPESQGFTCP*RVLAVL
Trigger: CAAGACGGCTAAAACTCTCCAGGGGCAGGTAAAGCC...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCAACATGTGCCTCACTaGTGGTGTGCCACTGTTCTC +
Preference number: 2 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYQHVPH*WCATVL
Trigger: GAGAACAGTGGCACACCACCAGTGAGGCACATGTTG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACAACATGTGCCTCACTaGTGGTGTGCCACTGTTCTC +
Preference number: 2 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPQHVPH*WCATVL
Trigger: GAGAACAGTGGCACACCACCAGTGAGGCACATGTTG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGAAGCAAAGAGCTGAGTaGGTCCTCTGCTCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQKQRAE*VLCSPE
Trigger: CTCTGGAGAGCAGAGGACTCACTCAGCTCTTTGCTT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACACTGCCAAGTTTTGGTaGGGAGTAACACCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYTAKFW*GVTPWH
Trigger: ATGCCAGGGTGTTACTCCTCACCAAAACTTGGCAGT...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATACCCAGCAGACAGAGTaGCTTCCTCCCCACCTCTGG +
Preference number: 2 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHTQQTE*LPPHLW
Trigger: CCAGAGGTGGGGAGGAAGGCACTCTGTCTGCTGGGT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR-3UTR GCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCGTCCCCTCTTCTCTCTaGCAAGAATCTCTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAVPSSL*QESLPS
Trigger: GCTTGGAAGAGATTCTTGGCAGAGAGAAGAGGGGAC...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACCACTGTTCTCATGCTaGCTCCTAAGTGACTCCGAT +
Preference number: 2 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPPLFSC*LLSDSD
Trigger: ATCGGAGTCACTTAGGAGGCAGCATGAGAACAGTGG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAGTTGTCAAGCCAACCTaGATTCTGCCTCCCTGTTAT +
Preference number: 2 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPVVKPT*ILPPCY
Trigger: ATAACAGGGAGGCAGAATTCAGGTTGGCTTGACAAC...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACTGGTCAATGTCCTGGTaGTTTTATGAGACTGCCCCA +
Preference number: 2 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYWSMSW*FYETAP
Trigger: TGGGGCAGTCTCATAAAATCACCAGGACATTGACCA...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACAGCCAACCTGAATTCTaGCTCCCTGTTATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYSQPEF*LPVIVP
Trigger: AGGGACTATAACAGGGAGGCAGAATTCAGGTTGGCT...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAAGCCAACCTGAATTCTaGCTCCCTGTTATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPSQPEF*LPVIVP
Trigger: AGGGACTATAACAGGGAGGCAGAATTCAGGTTGGCT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGCCACTGTTCTCATGCTaGCTCCTAAGTGACTCCGAT +
Preference number: 2 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQPLFSC*LLSDSD
Trigger: ATCGGAGTCACTTAGGAGGCAGCATGAGAACAGTGG...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGCAAAAAGGCAACATGTaGCTCACTGGTGGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQQKGNM*LTGGVP
Trigger: TGGCACACCACCAGTGAGGCACATGTTGCCTTTTTG...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGATGAGACTGCCCCACTaGGAAAACTTACTTACTTCA +
Preference number: 2 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEMRLPH*ENLLTS
Trigger: TGAAGTAAGTAAGTTTTCTCAGTGGGGCAGTCTCAT...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCGTCCTGGTGATTTTATaGGACTGCCCCACTGAGAAA +
Preference number: 2 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPVLVIL*DCPTEK
Trigger: TTTCTCAGTGGGGCAGTCTCATAAAATCACCAGGAC...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCACCACTTCCTTCCTTTaGCTCTTAAGACCTAGCAGG +
Preference number: 2 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPTTSFL*LLRPSR
Trigger: CCTGCTAGGTCTTAAGAGCCAAAGGAAGGAAGTGGT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACCAAAACTTCTTCTCTaGGCTACCTATCTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPPKLLL*ATYLPS
Trigger: TGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAAAGCAAAGAGCTGAGTaGGTCCTCTGCTCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLKQRAE*VLCSPE
Trigger: CTCTGGAGAGCAGAGGACTCACTCAGCTCTTTGCTT...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCCCTGTCTAAGGTGTTaGTTAAAGACAAAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEPCLRC*LKTKRQ
Trigger: TTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCCCTGTCTAAGGTGTTaGTTAAAGACAAAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYPCLRC*LKTKRQ
Trigger: TTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAGGCTTTACCTGCCCCTaGAGAGTTTTAGCCGTCTTG +
Preference number: 2 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLGFTCP*RVLAVL
Trigger: CAAGACGGCTAAAACTCTCCAGGGGCAGGTAAAGCC...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGGAGAAAGGTGTCCCATaGCCCCAAAAAGAACTGCCA +
Preference number: 2 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQEKGVP*PQKELP
Trigger: TGGCAGTTCTTTTTGGGGCCATGGGACACCTTTCTC...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGGTCCTGGTGATTTTATaGGACTGCCCCACTGAGAAA +
Preference number: 2 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQVLVIL*DCPTEK
Trigger: TTTCTCAGTGGGGCAGTCTCATAAAATCACCAGGAC...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATACTCAGTTTCTCGCCTaGCAAGAATCTCTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHTQFLA*QESLPS
Trigger: GCTTGGAAGAGATTCTTGGCAGGCGAGAAACTGAGT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR-3UTR CCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCGTCAGACTATTCCACTaGTTAAGTGTTTACTACCAT +
Preference number: 2 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSVRLFH*LSVYYH
Trigger: ATGGTAGTAAACACTTAACCAGTGGAATAGTCTGAC...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAACCACTTCCTTCCTTTaGCTCTTAAGACCTAGCAGG +
Preference number: 2 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLTTSFL*LLRPSR
Trigger: CCTGCTAGGTCTTAAGAGCCAAAGGAAGGAAGTGGT...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR GCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGTCCCCTCTTCTCTCTaGCAAGAATCTCTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLVPSSL*QESLPS
Trigger: GCTTGGAAGAGATTCTTGGCAGAGAGAAGAGGGGAC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTTTTGTGGTGGTTATTaGTTCTGGAAGGACCCTCGG +
Preference number: 2 (lower is better)
Translates to: RDKRPGGYKFIPSVINACFCGGY*FWKDPR
Trigger: CCGAGGGTCCTTCCAGAATCAATAACCACCACAAAA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR-3UTR TCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTAATAAGGAAGACAGCTaGTGCCTCCTTAGCCCCTTA +
Preference number: 2 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLNKEDS*CLLSPL
Trigger: TAAGGGGCTAAGGAGGCATCAGCTGTCTTCCTTATT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR CCA 72 bp TGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTaGTACCGCCAGAAACAGGAGTGGGTCTTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: WVQQDTPPFQGS*YRQKQEWVLSC
Trigger: ACAGGACAAGACCCACTCCTGTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR GCA 72 bp TGGTACCGCCAGAAACAGGAGTGGGTCTTGTCCTGTTaGAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCC +
Preference number: 3 (lower is better)
Translates to: WYRQKQEWVLSC*RHTAVVFLQLS
Trigger: GGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACTCCTGTTTCTGGCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR GCA 72 bp AACATGTGCCTCACTGGTGGTGTGCCACTGTTCTCATaGTGCCTCCTAAGTGACTCCGATTTTCAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: NMCLTGGVPLFS*CLLSDSDFQPW
Trigger: CCAGGGCTGAAAATCGGAGTCACTTAGGAGGCAGCATGAGAACAGTGGCACACCACCAGTGAGGCACATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR GCA 72 bp TGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTaGTTAAAGACAAAAAGGCAACATGTGCCTCACTGG +
Preference number: 3 (lower is better)
Translates to: CPHPGFRPCLRC*LKTKRQHVPHW
Trigger: CCAGTGAGGCACATGTTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 72 bp GGGCCTAGTCCCTGTTGTCATTTTTGTGGTGGTTATTaGTTCTGGAAGGACCCTCGGGTGCCAATGAGGCTC +
Preference number: 3 (lower is better)
Translates to: GPSPCCHFCGGY*FWKDPRVPMRL
Trigger: GAGCCTCATTGGCACCCGAGGGTCCTTCCAGAATCAATAACCACCACAAAAATGACAACAGGGACTAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR TCA 72 bp CTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTaGGTCACAGGCCAGAGCTGCCTTGGTATGTTGTTA +
Preference number: 3 (lower is better)
Translates to: LQWFSCSSPTNA*VTGQSCLGMLL
Trigger: TAACAACATACCAAGGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAGCCCTGTCTAAGGTGTaGCTTAAAGACAAAAAGGCA +
Preference number: 3 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPALSKV*LKDKKA
Trigger: TGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGC...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGACTTCACAACCAAATTaGTCCCCTCTTCTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQTSQPN*SPLLSA
Trigger: GGCAGAGAGAAGAGGGGACAAATTTGGTTGTGAAGT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGTGCTCCCAGCAGAGTaGAGACTGGCTCCGTTGAGT +
Preference number: 3 (lower is better)
Translates to: VPREDTSTFALSNPSSEKVLPAE*RLAPLS
Trigger: ACTCAACGGAGCCAGTCTCAACTCTGCTGGGAGCAC...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAGCCCTGTCTAAGGTGTaGCTTAAAGACAAAAAGGCA +
Preference number: 3 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPALSKV*LKDKKA
Trigger: TGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGC...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCAAGACACTTCAACCTTaGCCTTATCCAACCCCTCTT +
Preference number: 3 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAKTLQP*PYPTPL
Trigger: AAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTT...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 72 bp GTGGTTATTGATTCTGGAAGGACCCTCGGGTGCCAATaGGGCTCTCTAAGCCATAATCTTCTGAATGCAGGG +
Preference number: 3 (lower is better)
Translates to: VVIDSGRTLGCQ*GSLSHNLLNAG
Trigger: CCCTGCATTCAGAAGATTATGGCTTAGAGAGCCTCATTGGCACCCGAGGGTCCTTCCAGAATCAATAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR CCA 72 bp TCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCTTaGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: SNKRLSHRPELP*YVVKSKTSSLG
Trigger: GCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGTGCTCCCAGCAGAGTaGAGACTGGCTCCGTTGAGT +
Preference number: 3 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLVLPAE*RLAPLS
Trigger: ACTCAACGGAGCCAGTCTCAACTCTGCTGGGAGCAC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 72 bp CTACCATTAAAGCGAGGCATGAAGCAAAGAGCTGAGTaGGTCCTCTGCTCTCCAGAGGACCAAGAAATACCT +
Preference number: 3 (lower is better)
Translates to: LPLKRGMKQRAE*VLCSPEDQEIP
Trigger: AGGTATTTCTTGGTCCTCTGGAGAGCAGAGGACTCACTCAGCTCTTTGCTTCATGCCTCGCTTTAATGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 72 bp CCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATaGAGCAGGTGCTCAGGACCCGGAAGAATCATCTAC +
Preference number: 3 (lower is better)
Translates to: PKLLLWATYLPS*SRCSGPGRIIY
Trigger: GTAGATGATTCTTCCGGGTCCTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGACTTCACAACCAAATTaGTCCCCTCTTCTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMTSQPN*SPLLSA
Trigger: GGCAGAGAGAAGAGGGGACAAATTTGGTTGTGAAGT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGAGAGTTTTAGCCGTCTaGTGTTTCTTGTTTACTTCA +
Preference number: 3 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQRVLAV*CFLFTS
Trigger: TGAAGTAAACAAGAAACACAAGACGGCTAAAACTCT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAAAGAACTGCCAAGTTTaGGTGAGGAGTAACACCCTG +
Preference number: 3 (lower is better)
Translates to: VPREDTSTFALSNPSSEKKNCQV*VRSNTL
Trigger: CAGGGTGTTACTCCTCACCAAAACTTGGCAGTTCTT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 72 bp TTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGCTaGGTGAGTCCTCTGCTCTCCAGAGGACCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: FTTIKARHEAKS*VSPLLSRGPRN
Trigger: ATTTCTTGGTCCTCTGGAGAGCAGAGGACTCACTCAGCTCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTTTTTGTGGTGGTTATaGATTCTGGAAGGACCCTCG +
Preference number: 3 (lower is better)
Translates to: RDKRPGGYKFIPSVINACFLWWL*ILEGPS
Trigger: CGAGGGTCCTTCCAGAATCAATAACCACCACAAAAA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000335891.5
3UTR-3UTR CAA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAAGAGTTTTAGCCGTCTaGTGTTTCTTGTTTACTTCA +
Preference number: 3 (lower is better)
Translates to: VPREDTSTFALSNPSSEKRVLAV*CFLFTS
Trigger: TGAAGTAAACAAGAAACACAAGACGGCTAAAACTCT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR TCA 72 bp TGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTaGCTCAGTTTCTCGCCTGCCAAGAATCTCTTCCAA +
Preference number: 3 (lower is better)
Translates to: WEKEKGICSEFI*LSFSPAKNLFQ
Trigger: TTGGAAGAGATTCTTGGCAGGCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCACCCCGACCCCGCCAGTaGCCACAGTTCACACACACA +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPPRPRQ*PQFTHT
Trigger: TGTGTGTGTGAACTGTGGCCACTGGCGGGGTCGGGG...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGGCCGGACAGTGCTACTaGGAGACAGGCCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEAGQCY*ETGPLG
Trigger: CCCTAGTGGGCCTGTCTCGCAGTAGCACTGTCCGGC...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCCACAGCAGCATGGCTaGCCAGACGAGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNPQQHG*PDELQC
Trigger: GCATTGCAACTCGTCTGGGCAGCCATGCTGCTGTGG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACCACAGCAGCATGGCTaGCCAGACGAGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLPQQHG*PDELQC
Trigger: GCATTGCAACTCGTCTGGGCAGCCATGCTGCTGTGG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCACTGCCAGACGCTGCCTaGCCACTTCATACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPLPDAA*PLHTAC
Trigger: GCAGGCTGTATGAAGTGGGCAGGCAGCGTCTGGCAG...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTAGCCTCACTGGTGGTGTaGCACTGTTCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLASLVV*HCSHAA
Trigger: GGCAGCATGAGAACAGTGGCACACCACCAGTGAGGC...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCGCCAGGGCCCGGATTTaGTCTGCATCTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAARARI*SASVMG
Trigger: GCCCATCACAGATGCAGACCAAATCCGGGCCCTGGC...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAGAACCGCTCCCGTGCTaGGAATGCACAGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPEPLPC*ECTAGE
Trigger: TTCACCTGCTGTGCATTCTCAGCACGGGAGCGGTTC...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACGCCGGACAGTGCTACTaGGAGACAGGCCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHAGQCY*ETGPLG
Trigger: CCCTAGTGGGCCTGTCTCGCAGTAGCACTGTCCGGC...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTAAGAGCTTCCGTGGACTaGGACGCTTGTTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLRASVD*DACFPA
Trigger: GGCAGGAAAACAAGCGTCCCAGTCCACGGAAGCTCT...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACTGCTTTTAGGGTTCTaGGGCAGCTTTCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLLLLGF*GSFLRG
Trigger: TCCTCGGAGAAAGCTGCCTCAGAACCCTAAAAGCAG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCTGTTCCCGTGTGATTaGACACCACGCGACACTGAT +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNLFPCD*TPRDTD
Trigger: ATCAGTGTCGCGTGGTGTTCAATCACACGGGAACAG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACATGCTGCCTCCTAAGTaGCTCCGATTTTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNMLPPK*LRFSAL
Trigger: CAGGGCTGAAAATCGGAGTCACTTAGGAGGCAGCAT...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTAACCTATCTTCCTTCATaGAGCAGGTGCTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLTYLPS*SRCSGP
Trigger: GGGTCCTGAGCACCTGCTTCATGAAGGAAGATAGGT...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCATCTCCAACAAACGCCTaGGTCACAGGCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPSPTNA*VTGQSC
Trigger: GCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGA...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCGGCCCACTAGGGCTTTaGAGGCCAGGGCCCGGATTT +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPGPLGL*RPGPGF
Trigger: AAATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCC...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGGCTCCTTCATCAGCTaGTGGATCTGGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQGSFIS*WIWQLL
Trigger: CAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCC...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCGGCTCCTTCATCAGCTaGTGGATCTGGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAGSFIS*WIWQLL
Trigger: CAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCC...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATCACTGCGCTTGTCCTaGAGCACAGGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPSLRLS*STGSFI
Trigger: GATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGA...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCTTGTGGATGGCCTGTaGAGAGCGGACATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQLVDGL*RADIPE
Trigger: CTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTAGTGGGTGGACAAGAATaGCACCCTCAGTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLVGGQE*HPQSSE
Trigger: TTCAGAGGACTGAGGGTGGCATTCTTGTCCACCCAC...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAGCCCAGCATACACTCTaGATCAGCTCGACCAGGATG +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPAQHTL*ISSTRM
Trigger: CATCCTGGTCGAGCTGATCCAGAGTGTATGCTGGGC...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGGGGAGGCAGCAGTCATaGGCAGGTCAGCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEGRQQS*AGQPLL
Trigger: CAAAAGAGGCTGACCTGCCCATGACTGCTGCCTCCC...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACTTGCCGCCTCTGTTTTaGCTCAGGACATTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNLPPLF*LRTLVR
Trigger: CCTCACCAATGTCCTGAGCCAAAACAGAGGCGGCAA...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACAACATGTGCCTCACTaGTGGTGTGCCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLQHVPH*WCATVL
Trigger: GAGAACAGTGGCACACCACCAGTGAGGCACATGTTG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR CAA 72 bp CTGGTACCGCCAGAAACAGGAGTGGGTCTTGTCCTGTaGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LVPPETGVGLVL*QAHCSGFPAAL
Trigger: GAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACTCCTGTTTCTGGCGGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTATGTCCTCAATGGTTaGTCGGCCTCTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEYVLNG*SASRAH
Trigger: ATGGGCCCGAGAGGCCGATCAACCATTGAGGACATA...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAAGGACAGGAGCACCTTaGTGCCGTTGTTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPRTGAP*CRCWTE
Trigger: TTCAGTCCAACAACGGCATCAAGGTGCTCCTGTCCT...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCTGACACCCGTTCAATaGGTTCAGCAGCATACTTGC +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNLTPVQ*VQQHTC
Trigger: GCAAGTATGCTGCTGAACTCATTGAACGGGTGTCAG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACAACACCACGCGACACTaGTCCAGAGCGGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYNTTRH*SRAGTV
Trigger: TACTGTTCCCGCTCTGGATCAGTGTCGCGTGGTGTT...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAATCACTGTTCCCGTGTaGTTGAACACCACGCGACAC +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPITVPV*LNTTRH
Trigger: GTGTCGCGTGGTGTTCAATCACACGGGAACAGTGAT...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACTGTTCATGAGTATATaGGCATGCCTTGTACGGGGG +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLLFMSI*ACLVRG
Trigger: CCCCCGTACAAGGCATGCTCATATACTCATGAACAG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACCAAAGGGGAGTTGCCTaGATAAGATGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHQRGVA*IRWAGQ
Trigger: CTGCCCGGCCCATCTTATGCAGGCAACTCCCCTTTG...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCACAATCAAAGGGGAGTTaGCTGCATAAGATGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPQSKGS*LHKMGR
Trigger: CCGGCCCATCTTATGCAGGCAACTCCCCTTTGATTG...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACCATGGTCCGACTTCTaGCGCAACACTCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLPWSDF*RNTLIF
Trigger: GAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCCATGGTCCGACTTCTaGCGCAACACTCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNPWSDF*RNTLIF
Trigger: GAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCCACTGTTCTCATGCTaGCTCCTAAGTGACTCCGAT +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNPLFSC*LLSDSD
Trigger: ATCGGAGTCACTTAGGAGGCAGCATGAGAACAGTGG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGCCTCACTGGTGGTGTaGCACTGTTCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQASLVV*HCSHAA
Trigger: GGCAGCATGAGAACAGTGGCACACCACCAGTGAGGC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCTGGGTCTTGTCCTGTTaGAGGCACACTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAWVLSC*RHTAVV
Trigger: AACCACTGCAGTGTGCCTGCAACAGGACAAGACCCA...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCGCCCAGCATACACTCTaGATCAGCTCGACCAGGATG +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAAQHTL*ISSTRM
Trigger: CATCCTGGTCGAGCTGATCCAGAGTGTATGCTGGGC...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACATCAGCTGCTGGATCTaGCAGCTGCTGAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYISCWI*QLLKRG
Trigger: GCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGAT...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGATCAGCTGCTGGATCTaGCAGCTGCTGAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEISCWI*QLLKRG
Trigger: GCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGAT...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTAAGCAGCAGCAGTGACTaGGGTAAAGGCAGAAGAATG +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLSSSSD*GKGRRM
Trigger: CATTCTTCTGCCTTTACCCCAGTCACTGCTGCTGCT...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGGGCAGGTGGCAACTaGATTCTTGCAGCGAGCATG +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAWAGGN*ILAASM
Trigger: CATGCTCGCTGCAAGAATCCAGTTGCCACCTGCCCA...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCACCGATGACCCGATCCTaGGAGTGCTTACTGAACTCA +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPPMTRS*ECLLNS
Trigger: TGAGTTCAGTAAGCACTCCCAGGATCGGGTCATCGG...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACTGTCAAACTTGTGGATaGCCTGTGCAGAGCGGACAT +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNCQTCG*PVQSGH
Trigger: ATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACA...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATCCGCCTCCAGCAACTaGTCAGTGTCAAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPSASSN*SVSSSS
Trigger: AGATGAGCTTGACACTGACCAGTTGCTGGAGGCGGA...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGTACGGGGGTTGTGGGTaGACAAGAATGCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQYGGCG*TRMPPS
Trigger: TGAGGGTGGCATTCTTGTCCACCCACAACCCCCGTA...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCTTGTACGGGGGTTGTaGGTGGACAAGAATGCCACC +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYLVRGL*VDKNAT
Trigger: GGTGGCATTCTTGTCCACCCACAACCCCCGTACAAG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCGCCAGAAACAGGAGTaGGTCTTGTCCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPERQKQE*VLSCCR
Trigger: CCTGCAACAGGACAAGACCCACTCCTGTTTCTGGCG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCCATTCCAGGGTAGCTaGTACCGCCAGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQPFQGS*YRQKQE
Trigger: CTCCTGTTTCTGGCGGTACCAGCTACCCTGGAATGG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACTGCTTTTAGGGTTCTaGGGCAGCTTTCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPLLLGF*GSFLRG
Trigger: TCCTCGGAGAAAGCTGCCTCAGAACCCTAAAAGCAG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCCTGACACCCGTTCAATaGGTTCAGCAGCATACTTGC +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAALTPVQ*VQQHTC
Trigger: GCAAGTATGCTGCTGAACTCATTGAACGGGTGTCAG...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCCTGCCATTGCAGGGTaGTGGCCTCTCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQPAIAG*WPLSDK
Trigger: TTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCCTGCCATTGCAGGGTaGTGGCCTCTCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYPAIAG*WPLSDK
Trigger: TTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCGGCTTCCCGGAACACTaGAATAGGACGGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAGFPEH*NRTESA
Trigger: AGCAGATTCCGTCCTATTTCAGTGTTCCGGGAAGCC...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACAATAAGGAAGACAGCTaGTGCCTCCTTAGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNNKEDS*CLLSPL
Trigger: TAAGGGGCTAAGGAGGCATCAGCTGTCTTCCTTATT...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTATGGTCAATGTCCTGGTaGTTTTATGAGACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLWSMSW*FYETAP
Trigger: TGGGGCAGTCTCATAAAATCACCAGGACATTGACCA...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGGGACGCTTGTTTTCCTaGCGCAAAGCCACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEGRLFS*RKATSC
Trigger: ACAGGAAGTGGCTTTGCGGCAGGAAAACAAGCGTCC...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGGCCCACTAGGGCTTTaGAGGCCAGGGCCCGGATTT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHGPLGL*RPGPGF
Trigger: AAATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGCCGGACAGTGCTACTaGGAGACAGGCCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHAGQCY*ETGPLG
Trigger: CCCTAGTGGGCCTGTCTCGCAGTAGCACTGTCCGGC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACTCACTGCGCTTGTCCTaGAGCACAGGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHSLRLS*STGSFI
Trigger: GATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGA...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCATAGACACACCGGTTaGAGCCATAGAAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYHRHTG*SHRRTR
Trigger: CCTCGTCCTTCTATGGCTGCAACCGGTGTGTCTATG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACCAGCAGGGCTTTACCTaGCCCTGGAGAGTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHQQGFT*PWRVLA
Trigger: GGCTAAAACTCTCCAGGGGCAGGTAAAGCCCTGCTG...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTAAGCCAACCTGAATTCTaGCTCCCTGTTATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLSQPEF*LPVIVP
Trigger: AGGGACTATAACAGGGAGGCAGAATTCAGGTTGGCT...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCATGGGTCTTGTCCTGTTaGAGGCACACTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPWVLSC*RHTAVV
Trigger: AACCACTGCAGTGTGCCTGCAACAGGACAAGACCCA...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCACTGTCCAGCGTAGGTaGGGAAGGAAGATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNATVQRR*GRKMSV
Trigger: GACAGACATCTTCCTTCCCCACCTACGCTGGACAGT...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTCCGCCTCCAGCAACTaGTCAGTGTCAAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNASASSN*SVSSSS
Trigger: AGATGAGCTTGACACTGACCAGTTGCTGGAGGCGGA...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCATGTGCCTCACTGGTaGTGTGCCACTGTTCTCATG +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYHVPHW*CATVLM
Trigger: CATGAGAACAGTGGCACACCACCAGTGAGGCACATG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCGAGAAAGGTGTCCCATaGCCCCAAAAAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAEKGVP*PQKELP
Trigger: TGGCAGTTCTTTTTGGGGCCATGGGACACCTTTCTC...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
3UTR CAA 72 bp GTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTaGCTTAAAGACAAAAAGGCAACATGTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: VPPPRVQALSKV*LKDKKATCASL
Trigger: CAGTGAGGCACATGTTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGTTTCCAGCCCTGGCATaGTGTCTAATAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQFPALA*CLIGVC
Trigger: GCAGACTCCTATTAGACATCATGCCAGGGCTGGAAA...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGAGGACAGGAGCACCTTaGTGCCGTTGTTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQRTGAP*CRCWTE
Trigger: TTCAGTCCAACAACGGCATCAAGGTGCTCCTGTCCT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCATCATCAGCTCCCGTaGTCCAAGTTGCATGAATAT +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNHHQLP*SKLHEY
Trigger: ATATTCATGCAACTTGGATCACGGGAGCTGATGATG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGAGCATGGCAGCATCCTaGAGCATGAGAACACTCCAT +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPESMAAS*SMRTLH
Trigger: ATGGAGTGTTCTCATGCTTCAGGATGCTGCCATGCT...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCTGTTCATGAGTATATaGGCATGCCTTGTACGGGGG +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPELFMSI*ACLVRG
Trigger: CCCCCGTACAAGGCATGCTCATATACTCATGAACAG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACATCCAACACGTCCACTaGTTCTGCCAACTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHIQHVH*FCQLEL
Trigger: CAGCTCCAGTTGGCAGAATCAGTGGACGTGTTGGAT...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGATGCTGCCTCCTAAGTaGCTCCGATTTTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQMLPPK*LRFSAL
Trigger: CAGGGCTGAAAATCGGAGTCACTTAGGAGGCAGCAT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCACTGCCAAGTTTTGGTaGGGAGTAACACCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNATAKFW*GVTPWH
Trigger: ATGCCAGGGTGTTACTCCTCACCAAAACTTGGCAGT...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCACCTATCTTCCTTCATaGAGCAGGTGCTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSTYLPS*SRCSGP
Trigger: GGGTCCTGAGCACCTGCTTCATGAAGGAAGATAGGT...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCTGTTCCTTTTCCCACTaGTCCAGCAGGGTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSCSFSH*SSRVVS
Trigger: GCTCACTACCCTGCTGGAGCAGTGGGAAAAGGAACA...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACGCTGCCCAGACGAGTTaGAATGCCATTAGCGATACG +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHAAQTS*NAISDT
Trigger: CGTATCGCTAATGGCATTGCAACTCGTCTGGGCAGC...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCGCTGCCCAGACGAGTTaGAATGCCATTAGCGATACG +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSAAQTS*NAISDT
Trigger: CGTATCGCTAATGGCATTGCAACTCGTCTGGGCAGC...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACTGCTAAAGATAAGGTaGCTATCAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLLLKIR*LSKHPP
Trigger: TGGCGGATGCTTTGATAGGCACCTTATCTTTAGCAG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGCTGCCCTGTGCAGGTaGCAAGCATCAGGAACCGCT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHAALCR*QASGTA
Trigger: AGCGGTTCCTGATGCTTGGCACCTGCACAGGGCAGC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCTGCCCTGTGCAGGTaGCAAGCATCAGGAACCGCT +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMAALCR*QASGTA
Trigger: AGCGGTTCCTGATGCTTGGCACCTGCACAGGGCAGC...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCTTCATTCCCCAAAGTaGAGACAAAGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYLHSPK*RQRLAP
Trigger: TGGAGCCAGCCTTTGTCTGCACTTTGGGGAATGAAG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACGTCCCCATCTTCCCCTaGGTTCTCATTATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYVPIFP*VLIIVV
Trigger: GACGACAATAATGAGAACGCAGGGGAAGATGGGGAC...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACCATAGACACACCGGTTaGAGCCATAGAAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHHRHTG*SHRRTR
Trigger: CCTCGTCCTTCTATGGCTGCAACCGGTGTGTCTATG...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCGAGCCTCAAAGTATTTaGGCAAGGCCATGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAEPQSI*ARPCRY
Trigger: ATACCTGCATGGCCTTGCGCAAATACTTTGAGGCTC...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACGTCCCCTCTTCTCTCTaGCAAGAATCTCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYVPSSL*QESLPS
Trigger: GCTTGGAAGAGATTCTTGGCAGAGAGAAGAGGGGAC...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGAGCTGTGGTCACAGCTaGCAGGTACCTAAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQSCGHS*QVPKQV
Trigger: GACTTGCTTAGGTACCTGGCAGCTGTGACCACAGCT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGAGAATATGTCCTCAATaGTTGATCGGCCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPERICPQ*LIGLSG
Trigger: GCCCGAGAGGCCGATCAACCATTGAGGACATATTCT...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGAGAAGAGAGCTTCCGTaGACTGGGACGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQRRELP*TGTLVF
Trigger: GAAAACAAGCGTCCCAGTCCACGGAAGCTCTCTTCT...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGTTGCAGAACTTGACATaGTCACTGCGCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQLQNLT*SLRLSC
Trigger: GCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAA...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCTGGGCAGGTGGCAACTaGATTCTTGCAGCGAGCATG +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPWAGGN*ILAASM
Trigger: CATGCTCGCTGCAAGAATCCAGTTGCCACCTGCCCA...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGAGTGCAGACAAAGGCTaGCTCCAAGTAGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPESADKG*LQVADV
Trigger: GACATCTGCTACTTGGAGCCAGCCTTTGTCTGCACT...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAAACTTGTCAAACTTGTaGATGGCCTGTGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPNLSNL*MACAER
Trigger: CCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCACCTCCAGTCCATTTaGATGGAAAACACCACTGAT +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNHLQSI*MENTTD
Trigger: ATCAGTGGTGTTTTCCATCCAAATGGACTGGAGGTG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTACACCTCCAGTCCATTTaGATGGAAAACACCACTGAT +
Preference number: 4 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLHLQSI*MENTTD
Trigger: ATCAGTGGTGTTTTCCATCCAAATGGACTGGAGGTG...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACGTGGCAAATTTGTTATaGAGCAGGAGAGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNVANLL*SRRDAR
Trigger: CCTAGCATCTCTCCTGCTCCATAACAAATTTGCCAC...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCCAACATGTGCCTCACTaGTGGTGTGCCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSQHVPH*WCATVL
Trigger: GAGAACAGTGGCACACCACCAGTGAGGCACATGTTG...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCGAGAAAGGTGTCCCATaGCCCCAAAAAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAEKGVP*PQKELP
Trigger: TGGCAGTTCTTTTTGGGGCCATGGGACACCTTTCTC...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCCCATTCCAGGGTAGCTaGTACCGCCAGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPPFQGS*YRQKQE
Trigger: CTCCTGTTTCTGGCGGTACCAGCTACCCTGGAATGG...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAAGAATGCACAGCAGGTaGAGCCACTCTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPRMHSR*SHSHLH
Trigger: ATGAAGATGAGAGTGGCTTCACCTGCTGTGCATTCT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCAAATGTTCGGAAGGATaGCCCAAAGGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAKCSEG*PKGAFH
Trigger: ATGAAAAGCCCCTTTGGGTCATCCTTCCGAACATTT...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCATCTCTTCCAAGCAGTaGTGGCTCCTCACTCATTCA +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAISSKQ*WLLTHS
Trigger: TGAATGAGTGAGGAGCCATCACTGCTTGGAAGAGAT...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACATGGGAAGTAGCTCCTaGTATTCTCCTAGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHMGSSS*YSPRGV
Trigger: GACCCCTCTAGGAGAATATCAGGAGCTACTTCCCAT...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCCATCATCAGCTCCCGTaGTCCAAGTTGCATGAATAT +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAHHQLP*SKLHEY
Trigger: ATATTCATGCAACTTGGATCACGGGAGCTGATGATG...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCCATGAAGCAAAGAGCTaGGTGAGTCCTCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPHEAKS*VSPLLS
Trigger: GGAGAGCAGAGGACTCACTCAGCTCTTTGCTTCATG...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACGTCCTGGTGATTTTATaGGACTGCCCCACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYVLVIL*DCPTEK
Trigger: TTTCTCAGTGGGGCAGTCTCATAAAATCACCAGGAC...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTGGTCAATGTCCTGGTaGTTTTATGAGACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEWSMSW*FYETAP
Trigger: TGGGGCAGTCTCATAAAATCACCAGGACATTGACCA...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCACTGCCAAGTTTTGGTaGGGAGTAACACCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSTAKFW*GVTPWH
Trigger: ATGCCAGGGTGTTACTCCTCACCAAAACTTGGCAGT...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAATAGGTACCATGTCCTaGCCACTGCCATGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPIGTMS*PLPCSF
Trigger: AAAGGAACATGGCAGTGGGCAGGACATGGTACCTAT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGATCTTGGCCAGGGTGTaGTCACTGCTTTTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQILARV*SLLLGF
Trigger: GAACCCTAAAAGCAGTGAGCACACCCTGGCCAAGAT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGGGCCCACTAGGGCTTTaGAGGCCAGGGCCCGGATTT +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEGPLGL*RPGPGF
Trigger: AAATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCC...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCCACAGCAGCATGGCTaGCCAGACGAGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHPQQHG*PDELQC
Trigger: GCATTGCAACTCGTCTGGGCAGCCATGCTGCTGTGG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGCTTGTGGATGGCCTGTaGAGAGCGGACATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQLVDGL*RADIPE
Trigger: CTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAG...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCCCACTTCATACAGCCTaGATACTGTGTCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAPLHTA*ILCPCS
Trigger: TGAACATGGACACAGTATGCAGGCTGTATGAAGTGG...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAACTGCCAGACGCTGCCTaGCCACTTCATACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKLPDAA*PLHTAC
Trigger: GCAGGCTGTATGAAGTGGGCAGGCAGCGTCTGGCAG...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGTCCTCTGCCAGACGCTaGCTGCCCACTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMSSARR*LPTSYS
Trigger: GCTGTATGAAGTGGGCAGGCAGCGTCTGGCAGAGGA...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTTCATCCTCATCCTCTaGCAGACGCTGCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHFILIL*QTLPAH
Trigger: GTGGGCAGGCAGCGTCTGGCAGAGGATGAGGATGAA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGTTCATCCTCATCCTCTaGCAGACGCTGCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMFILIL*QTLPAH
Trigger: GTGGGCAGGCAGCGTCTGGCAGAGGATGAGGATGAA...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACTGGAGAATGAGTCGCTaGTCGATAGCAGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYWRMSR*SIAGVI
Trigger: TATGACTCCTGCTATCGAGCAGCGACTCATTCTCCA...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATCCCGTGATCCAAGTTaGATGAATATGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPSRDPS*MNMGSS
Trigger: GCTACTTCCCATATTCATGCAACTTGGATCACGGGA...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCATTTGCGCAAGGCCATaGAGGTATGTTTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAICARP*RYVSQF
Trigger: AAACTGGGAAACATACCTGCATGGCCTTGCGCAAAT...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACGGTTCCCAATATAGCTaGGCTGGGCCATATTCTATC +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYGSQYS*AGPYSI
Trigger: GATAGAATATGGCCCAGCGCAGCTATATTGGGAACC...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCAGCTGTGGTCACAGCTaGCAGGTACCTAAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPSCGHS*QVPKQV
Trigger: GACTTGCTTAGGTACCTGGCAGCTGTGACCACAGCT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGCCAGGGCCCGGATTTaGTCTGCATCTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKARARI*SASVMG
Trigger: GCCCATCACAGATGCAGACCAAATCCGGGCCCTGGC...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCACTGTCCAGCGTAGGTaGGGAAGGAAGATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPTVQRR*GRKMSV
Trigger: GACAGACATCTTCCTTCCCCACCTACGCTGGACAGT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCCACTCTCATCTTCATTaGCTTCCCGGAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAHSHLH*LPGTLK
Trigger: TTTCAGTGTTCCGGGAAGCCAATGAAGATGAGAGTG...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGAGTGCAGACAAAGGCTaGCTCCAAGTAGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQSADKG*LQVADV
Trigger: GACATCTGCTACTTGGAGCCAGCCTTTGTCTGCACT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGAACTTGTCAAACTTGTaGATGGCCTGTGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQNLSNL*MACAER
Trigger: CCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCCCCGACCCCGCCAGTaGCCACAGTTCACACACACA +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEPRPRQ*PQFTHT
Trigger: TGTGTGTGTGAACTGTGGCCACTGGCGGGGTCGGGG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCTCCATCCTCAGGTTTaGTTGTTGAGTTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPELHPQV*LLSSLC
Trigger: GCAGAGTGAACTCAACAACCAAACCTGAGGATGGAG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCGTGGCAAATTTGTTATaGAGCAGGAGAGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAVANLL*SRRDAR
Trigger: CCTAGCATCTCTCCTGCTCCATAACAAATTTGCCAC...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTATGTCCTCAATGGTTaGTCGGCCTCTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHYVLNG*SASRAH
Trigger: ATGGGCCCGAGAGGCCGATCAACCATTGAGGACATA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGAGAAGTGGTTTTCCTaGCACCCGTTCAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQEKWFS*HPFNEF
Trigger: GAACTCATTGAACGGGTGTCAGGAAAACCACTTCTC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACGAGAAGTGGTTTTCCTaGCACCCGTTCAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHEKWFS*HPFNEF
Trigger: GAACTCATTGAACGGGTGTCAGGAAAACCACTTCTC...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCAAATGTTCGGAAGGATaGCCCAAAGGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAKCSEG*PKGAFH
Trigger: ATGAAAAGCCCCTTTGGGTCATCCTTCCGAACATTT...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAACTAGTCTTGTGGCCTaGATCAAGATGAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPTSLVA*IKMKGD
Trigger: ATCTCCTTTCATCTTGATTCAGGCCACAAGACTAGT...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCTCAGGTTTGGTTGTTaGGTTCACTCTGCTACTAGT +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPELRFGC*VHSATS
Trigger: ACTAGTAGCAGAGTGAACTCAACAACCAAACCTGAG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAGTGATCCAAGTTGCATaGATATGGGAAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPVIQVA*IWEVAP
Trigger: AGGAGCTACTTCCCATATTCATGCAACTTGGATCAC...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCTCCACAATCTGTTCATaGGTATATGAGCATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAASTICS*VYEHAL
Trigger: CAAGGCATGCTCATATACTCATGAACAGATTGTGGA...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACGTTGTCAAGCCAACCTaGATTCTGCCTCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHVVKPT*ILPPCY
Trigger: ATAACAGGGAGGCAGAATTCAGGTTGGCTTGACAAC...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAATCTCCAACAAACGCCTaGGTCACAGGCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKSPTNA*VTGQSC
Trigger: GCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGA...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACTGTCTAATAGGAGTCTaGAAGCTGCAGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNCLIGV*KLQCLK
Trigger: CTTTAAACACTGCAGCTTGCAGACTCCTATTAGACA...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAGTCATCTTCATCATCTaGCTGCAACATAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPVIFII*LQHSSI
Trigger: TATGGAGCTATGTTGCAGGCAGATGATGAAGATGAC...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCCACTTCATACAGCCTaGATACTGTGTCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEPLHTA*ILCPCS
Trigger: TGAACATGGACACAGTATGCAGGCTGTATGAAGTGG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGAAAGGGTATAATTGGTaGCAATCACCCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQKGYNW*QSPRET
Trigger: TGTCTCCCTGGGTGATTGGCACCAATTATACCCTTT...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGTGGAGAATGAGTCGCTaGTCGATAGCAGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQWRMSR*SIAGVI
Trigger: TATGACTCCTGCTATCGAGCAGCGACTCATTCTCCA...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTCCCGTGATCCAAGTTaGATGAATATGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNASRDPS*MNMGSS
Trigger: GCTACTTCCCATATTCATGCAACTTGGATCACGGGA...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTTCTGTACTCCACCATaGGCAACAAATTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAFCTPP*ATNSVA
Trigger: TGCCACAGAATTTGTTGCGCATGGTGGAGTACAGAA...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCATTGTGGGGATGCATaGAAACTCTTTCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYHCGDA*KLFPWH
Trigger: ATGCCATGGAAAGAGTTTGCATGCATCCCCACAATG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAATTTGCGCAAGGCCATaGAGGTATGTTTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPICARP*RYVSQF
Trigger: AAACTGGGAAACATACCTGCATGGCCTTGCGCAAAT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCAGCTGCAACAAGAGTTaGACACAAGAAAGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAASCNKS*TQESLR
Trigger: CCTCAAACTTTCTTGTGTGCAACTCTTGTTGCAGCT...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCCCTGTCTAAGGTGTTaGTTAAAGACAAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNPCLRC*LKTKRQ
Trigger: TTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGAGACACTTCAACCTTTaGCTTATCCAACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQRHFNL*LIQPLF
Trigger: GAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACGTCACAGGCCAGAGCTaGCTTGGTATGTTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHVTGQS*LGMLLS
Trigger: ACTTAACAACATACCAAGGCAGCTCTGGCCTGTGAC...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCATGTCGATCATCAAATaGGTCTGGATCCCCTTTACG +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAMSIIK*VWIPFT
Trigger: CGTAAAGGGGATCCAGACCCATTTGATGATCGACAT...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGAAGGAGATCCTTGACTaGGCAACAACATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQKEILD*ATTSAF
Trigger: GAAAGCAGATGTTGTTGCCCAGTCAAGGATCTCCTT...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCACTCTCATCTTCATTaGCTTCCCGGAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYHSHLH*LPGTLK
Trigger: TTTCAGTGTTCCGGGAAGCCAATGAAGATGAGAGTG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCTCCAGTCCATTTGGATaGAAAACACCACTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAASSPFG*KTPLMF
Trigger: GAACATCAGTGGTGTTTTCCATCCAAATGGACTGGA...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACCCAGAAGCTTCCTCTTaGTCTCCATCCACTACATCT +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHPEASS*SPSTTS
Trigger: AGATGTAGTGGATGGAGACCAAGAGGAAGCTTCTGG...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACCTCCATCCTCAGGTTTaGTTGTTGAGTTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHLHPQV*LLSSLC
Trigger: GCAGAGTGAACTCAACAACCAAACCTGAGGATGGAG...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGAGAGGGGTCAAATATTaGAGAATGAGTCGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQRGVKY*RMSRCS
Trigger: CGAGCAGCGACTCATTCTCCAATATTTGACCCCTCT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCTGGAGCTGGATTTTTaGCACCACAGTAAGAATAGC +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPELELDF*HHSKNS
Trigger: GCTATTCTTACTGTGGTGCCAAAAATCCAGCTCCAG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCTGGAGCTGGATTTTTaGCACCACAGTAAGAATAGC +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQLELDF*HHSKNS
Trigger: GCTATTCTTACTGTGGTGCCAAAAATCCAGCTCCAG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACATTCCCTCCTTTTCTTaGAAGACGACAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHIPSFS*KTTAVS
Trigger: GGAAACTGCTGTCGTCTTTCAAGAAAAGGAGGGAAT...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCTTGGCAGCAATGTCTTaGTTTTCCATAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSLAAMS*FSIAPP
Trigger: AGGAGGTGCTATGGAAAATCAAGACATTGCTGCCAA...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCATGCCGTTGTTGGACTaGACCACATTCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPMPLLD*TTFHIL
Trigger: CAAGATGTGGAATGTGGTTCAGTCCAACAACGGCAT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAGGACAGGAGCACCTTaGTGCCGTTGTTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHRTGAP*CRCWTE
Trigger: TTCAGTCCAACAACGGCATCAAGGTGCTCCTGTCCT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAGGGAAGGAGATCCTTaGCTGGGCAACAACATCTGC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHREGDP*LGNNIC
Trigger: GCAGATGTTGTTGCCCAGTCAAGGATCTCCTTCCCT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCCTGCCATTGCAGGGTaGTGGCCTCTCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHPAIAG*WPLSDK
Trigger: TTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTCTGCCGCAACACTCTaGTTTTCCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHSAATL*FSCHCR
Trigger: CCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGGCTTCCCGGAACACTaGAATAGGACGGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHGFPEH*NRTESA
Trigger: AGCAGATTCCGTCCTATTTCAGTGTTCCGGGAAGCC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAAAGATGTGTGATGGCTaGGTTGTGACAGTTATAGCT +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPKMCDG*VVTVIA
Trigger: AGCTATAACTGTCACAACTCAGCCATCACACATCTT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCACAGTATGCAAAAGATaGAAAGTTCGAAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAATVCKR*KVRRSQ
Trigger: TTGGGACCTTCGAACTTTTCATCTTTTGCATACTGT...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCTCAGAAGTGCACCCTaGTCTTCCAAATTTAGAATC +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYLRSAP*SSKFRI
Trigger: GATTCTAAATTTGGAAGATCAGGGTGCACTTCTGAG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGAAGCAAAGAGCTGAGTaGGTCCTCTGCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMKQRAE*VLCSPE
Trigger: CTCTGGAGAGCAGAGGACTCACTCAGCTCTTTGCTT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCGCTTGTCATCACATATaGATTCACCAGTGCATTCAT +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAACHHI*IHQCIH
Trigger: ATGAATGCACTGGTGAATGCATATGTGATGACAAGC...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423656.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGGACGCTTGTTTTCCTaGCGCAAAGCCACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHGRLFS*RKATSC
Trigger: ACAGGAAGTGGCTTTGCGGCAGGAAAACAAGCGTCC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGCTGCCCAGACGAGTTaGAATGCCATTAGCGATACG +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHAAQTS*NAISDT
Trigger: CGTATCGCTAATGGCATTGCAACTCGTCTGGGCAGC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCAAAGGGGAGTTGCCTaGATAAGATGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEQRGVA*IRWAGQ
Trigger: CTGCCCGGCCCATCTTATGCAGGCAACTCCCCTTTG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCTGCCAGACGCTGCCTaGCCACTTCATACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLPDAA*PLHTAC
Trigger: GCAGGCTGTATGAAGTGGGCAGGCAGCGTCTGGCAG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCACCCAGCAGACAGAGTaGCTTCCTCCCCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRTQQTE*LPPHLW
Trigger: CCAGAGGTGGGGAGGAAGGCACTCTGTCTGCTGGGT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACTTCTGTACTCCACCATaGGCAACAAATTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHFCTPP*ATNSVA
Trigger: TGCCACAGAATTTGTTGCGCATGGTGGAGTACAGAA...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGCATTGTGGGGATGCATaGAAACTCTTTCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQHCGDA*KLFPWH
Trigger: ATGCCATGGAAAGAGTTTGCATGCATCCCCACAATG...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGGTGGGTGGACAAGAATaGCACCCTCAGTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQVGGQE*HPQSSE
Trigger: TTCAGAGGACTGAGGGTGGCATTCTTGTCCACCCAC...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAAGCTGCAACAAGAGTTaGACACAAGAAAGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPSCNKS*TQESLR
Trigger: CCTCAAACTTTCTTGTGTGCAACTCTTGTTGCAGCT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCAGCCAACCTGAATTCTaGCTCCCTGTTATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPSQPEF*LPVIVP
Trigger: AGGGACTATAACAGGGAGGCAGAATTCAGGTTGGCT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAAGAGCTTCCGTGGACTaGGACGCTTGTTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLRASVD*DACFPA
Trigger: GGCAGGAAAACAAGCGTCCCAGTCCACGGAAGCTCT...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACGGATATTCGGTTATCTaGGCCACACACACAATTGAT +
Preference number: 4 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYGYSVI*ATHTID
Trigger: ATCAATTGTGTGTGTGGCCCAGATAACCGAATATCC...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGGGATATTCGGTTATCTaGGCCACACACACAATTGAT +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEGYSVI*ATHTID
Trigger: ATCAATTGTGTGTGTGGCCCAGATAACCGAATATCC...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGCCAGGGCCCGGATTTaGTCTGCATCTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACARARI*SASVMG
Trigger: GCCCATCACAGATGCAGACCAAATCCGGGCCCTGGC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGTAAAGGCAGAAGAATaGGAGGCAGCAGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHVKAEE*EAAVMG
Trigger: GCCCATGACTGCTGCCTCCCATTCTTCTGCCTTTAC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGGTAAAGGCAGAAGAATaGGAGGCAGCAGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQVKAEE*EAAVMG
Trigger: GCCCATGACTGCTGCCTCCCATTCTTCTGCCTTTAC...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCCGATGACCCGATCCTaGGAGTGCTTACTGAACTCA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHPMTRS*ECLLNS
Trigger: TGAGTTCAGTAAGCACTCCCAGGATCGGGTCATCGG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGTTGTTGGCAAGATCTaGGTTAAACAGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQVVGKI*VKQSQQ
Trigger: CTGTTGACTCTGTTTAACCCAGATCTTGCCAACAAC...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACAAGATAGCAGTCTTTaGTGTCTGTACACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPQDSSL*CLYTGQ
Trigger: TTGACCTGTGTACAGACACCAAAGACTGCTATCTTG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTCCGCCTCCAGCAACTaGTCAGTGTCAAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHSASSN*SVSSSS
Trigger: AGATGAGCTTGACACTGACCAGTTGCTGGAGGCGGA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCGTATGTTTCCCAGTTTaGCGGCTAGCAAATATTTCA +
Preference number: 4 (lower is better)
Translates to: SGFPAALQQTPESQARAAVCFPV*RLANIS
Trigger: TGAAATATTTGCTAGCCGCCAAACTGGGAAACATAC...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCACTGATTCTGCCAACTaGAGCTGGATTTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPTDSAN*SWIFGT
Trigger: GGTGCCAAAAATCCAGCTCCAGTTGGCAGAATCAGT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGGCTTTACCTGCCCCTaGAGAGTTTTAGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMGFTCP*RVLAVL
Trigger: CAAGACGGCTAAAACTCTCCAGGGGCAGGTAAAGCC...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCCAAAACTTCTTCTCTaGGCTACCTATCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEPKLLL*ATYLPS
Trigger: TGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCGATAATCTGAAGTGCTaGCTTCTGAATTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNADNLKC*LLNFSI
Trigger: GATGCTGAAATTCAGAAGTCAGCACTTCAGATTATC...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCTGACACCCGTTCAATaGGTTCAGCAGCATACTTGC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHLTPVQ*VQQHTC
Trigger: GCAAGTATGCTGCTGAACTCATTGAACGGGTGTCAG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTGCCGCAACACTCTaGTTTTCCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLSAATL*FSCHCR
Trigger: CCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGA...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGAACCGCTCCCGTGCTaGGAATGCACAGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACEPLPC*ECTAGE
Trigger: TTCACCTGCTGTGCATTCTCAGCACGGGAGCGGTTC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCTTCATATCAAATACTaGCTTCATTCCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQLHIKY*LHSPKC
Trigger: GCACTTTGGGGAATGAAGTCAGTATTTGATATGAAG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACTTCATATCAAATACTaGCTTCATTCCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPLHIKY*LHSPKC
Trigger: GCACTTTGGGGAATGAAGTCAGTATTTGATATGAAG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCACATAGTGATCTTCTGTaGAGGAATGCTTCATATCAA +
Preference number: 4 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPHSDLL*RNASYQ
Trigger: TTGATATGAAGCATTCCTTCACAGAAGATCACTATG...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAATCACTGTTCCCGTGTaGTTGAACACCACGCGACAC +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKITVPV*LNTTRH
Trigger: GTGTCGCGTGGTGTTCAATCACACGGGAACAGTGAT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGACTAGTCTTGTGGCCTaGATCAAGATGAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQTSLVA*IKMKGD
Trigger: ATCTCCTTTCATCTTGATTCAGGCCACAAGACTAGT...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGATCTGGATCAGAAGATaGGAAACCCAACTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEIWIRR*ETQLLL
Trigger: AAGCAAAAGTTGGGTTTCTCATCTTCTGATCCAGAT...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGATGGGAAGTAGCTCCTaGTATTCTCCTAGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMMGSSS*YSPRGV
Trigger: GACCCCTCTAGGAGAATATCAGGAGCTACTTCCCAT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACCACCCTCAGTCCTCTaGAGTGACTGCTTCACTTGT +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLPPSVL*SDCFTC
Trigger: ACAAGTGAAGCAGTCACTTCAGAGGACTGAGGGTGG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAATCCAACACGTCCACTaGTTCTGCCAACTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKIQHVH*FCQLEL
Trigger: CAGCTCCAGTTGGCAGAATCAGTGGACGTGTTGGAT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATGTTCCTTTTCCCACTaGTCCAGCAGGGTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLCSFSH*SSRVVS
Trigger: GCTCACTACCCTGCTGGAGCAGTGGGAAAAGGAACA...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGGCTCCTTCATCAGCTaGTGGATCTGGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACGSFIS*WIWQLL
Trigger: CAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCAAAGGGGAGTTGCCTaGATAAGATGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRQRGVA*IRWAGQ
Trigger: CTGCCCGGCCCATCTTATGCAGGCAACTCCCCTTTG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAACAATCAAAGGGGAGTTaGCTGCATAAGATGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKQSKGS*LHKMGR
Trigger: CCGGCCCATCTTATGCAGGCAACTCCCCTTTGATTG...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTGCCCTGTGCAGGTaGCAAGCATCAGGAACCGCT +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSAALCR*QASGTA
Trigger: AGCGGTTCCTGATGCTTGGCACCTGCACAGGGCAGC...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGCTTCATTCCCCAAAGTaGAGACAAAGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQLHSPK*RQRLAP
Trigger: TGGAGCCAGCCTTTGTCTGCACTTTGGGGAATGAAG...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCTTGTGGATGGCCTGTaGAGAGCGGACATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACLVDGL*RADIPE
Trigger: CTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTCCTCTGCCAGACGCTaGCTGCCCACTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACSSARR*LPTSYS
Trigger: GCTGTATGAAGTGGGCAGGCAGCGTCTGGCAGAGGA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTTCCTCTGCCAGACGCTaGCTGCCCACTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLSSARR*LPTSYS
Trigger: GCTGTATGAAGTGGGCAGGCAGCGTCTGGCAGAGGA...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGTCCCCTCTTCTCTCTaGCAAGAATCTCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMVPSSL*QESLPS
Trigger: GCTTGGAAGAGATTCTTGGCAGAGAGAAGAGGGGAC...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAGTGCCACTGTTCTCATaGTGCCTCCTAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLVPLFS*CLLSDS
Trigger: GGAGTCACTTAGGAGGCAGCATGAGAACAGTGGCAC...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACATCATCAAATGGGTCTaGATCCCCTTTACGATACTC +
Preference number: 4 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHIIKWV*IPFTIL
Trigger: GAGTATCGTAAAGGGGATCCAGACCCATTTGATGAT...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAGAATATGTCCTCAATaGTTGATCGGCCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHRICPQ*LIGLSG
Trigger: GCCCGAGAGGCCGATCAACCATTGAGGACATATTCT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAGAAGAGAGCTTCCGTaGACTGGGACGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHRRELP*TGTLVF
Trigger: GAAAACAAGCGTCCCAGTCCACGGAAGCTCTCTTCT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGGGAGGCAGCAGTCATaGGCAGGTCAGCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACGRQQS*AGQPLL
Trigger: CAAAAGAGGCTGACCTGCCCATGACTGCTGCCTCCC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAGTAAAGGCAGAAGAATaGGAGGCAGCAGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLVKAEE*EAAVMG
Trigger: GCCCATGACTGCTGCCTCCCATTCTTCTGCCTTTAC...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGTGTCAAACTTGTGGATaGCCTGTGCAGAGCGGACAT +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMCQTCG*PVQSGH
Trigger: ATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACA...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGCAAGATAGCAGTCTTTaGTGTCTGTACACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQQDSSL*CLYTGQ
Trigger: TTGACCTGTGTACAGACACCAAAGACTGCTATCTTG...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACATGTGCCTCACTGGTaGTGTGCCACTGTTCTCATG +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLHVPHW*CATVLM
Trigger: CATGAGAACAGTGGCACACCACCAGTGAGGCACATG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCAGGCCAGAGCTGCCTTaGTATGTTGTTAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPRPELP*YVVKSK
Trigger: TTTGGACTTAACAACATACCAAGGCAGCTCTGGCCT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAATTTCCAGCCCTGGCATaGTGTCTAATAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKFPALA*CLIGVC
Trigger: GCAGACTCCTATTAGACATCATGCCAGGGCTGGAAA...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCCTCTCGGGCCCATTTaGAAAGATTCTCGACAATTC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHPLGPI*KDSRQF
Trigger: GAATTGTCGAGAATCTTTTCAAATGGGCCCGAGAGG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGCCTCTCGGGCCCATTTaGAAAGATTCTCGACAATTC +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQPLGPI*KDSRQF
Trigger: GAATTGTCGAGAATCTTTTCAAATGGGCCCGAGAGG...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGATGCCGTTGTTGGACTaGACCACATTCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQMPLLD*TTFHIL
Trigger: CAAGATGTGGAATGTGGTTCAGTCCAACAACGGCAT...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGAGGGAAGGAGATCCTTaGCTGGGCAACAACATCTGC +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEREGDP*LGNNIC
Trigger: GCAGATGTTGTTGCCCAGTCAAGGATCTCCTTCCCT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCAAGATGTGTGATGGCTaGGTTGTGACAGTTATAGCT +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPKMCDG*VVTVIA
Trigger: AGCTATAACTGTCACAACTCAGCCATCACACATCTT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACATAGTGATCTTCTGTaGAGGAATGCTTCATATCAA +
Preference number: 4 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPHSDLL*RNASYQ
Trigger: TTGATATGAAGCATTCCTTCACAGAAGATCACTATG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCAACACCACGCGACACTaGTCCAGAGCGGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRNTTRH*SRAGTV
Trigger: TACTGTTCCCGCTCTGGATCAGTGTCGCGTGGTGTT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTAACACCACGCGACACTaGTCCAGAGCGGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLNTTRH*SRAGTV
Trigger: TACTGTTCCCGCTCTGGATCAGTGTCGCGTGGTGTT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCTGTTCCCGTGTGATTaGACACCACGCGACACTGAT +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASELFPCD*TPRDTD
Trigger: ATCAGTGTCGCGTGGTGTTCAATCACACGGGAACAG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCATTCAGAGATAAGATaGTGTCATCTTCCAAATCAG +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQHSEIR*CHLPNQ
Trigger: CTGATTTGGAAGATGACATCATCTTATCTCTGAATG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAGTTTACTGATGATCTaGCGGACAGTGCTACTGCGA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHSLLMI*RTVLLR
Trigger: TCGCAGTAGCACTGTCCGGCAGATCATCAGTAAACT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCTCACTGCGCTTGTCCTaGAGCACAGGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRSLRLS*STGSFI
Trigger: GATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGA...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGAAGTTTATTGGCGCTTaGCGCCTCTGTTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMKFIGA*RLCFGS
Trigger: TGAGCCAAAACAGAGGCGGCAAGCGCCAATAAACTT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGAGGTTTGTAGTCAGTTaGATTAAATGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QAHCSGFPAALQQTPESQRFVVS*IKCSEG
Trigger: TCCTTCCGAACATTTAATGCAACTGACTACAAACCT...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTTCCACCTCCTCATCTaGATCAGAGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHFHLLI*IRVFIL
Trigger: GAGGATGAAGACTCTGATGCAGATGAGGAGGTGGAA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGTTCCACCTCCTCATCTaGATCAGAGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQFHLLI*IRVFIL
Trigger: GAGGATGAAGACTCTGATGCAGATGAGGAGGTGGAA...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCAGAACATTGTGGGGATaGATGCAAACTCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPRTLWG*MQTLSM
Trigger: CATGGAAAGAGTTTGCATGCATCCCCACAATGTTCT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGGGTTCCCAATATAGCTaGGCTGGGCCATATTCTATC +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQGSQYS*AGPYSI
Trigger: GATAGAATATGGCCCAGCGCAGCTATATTGGGAACC...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCCACAGTGTCATTCCTTaGATAATAGGTCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNAHSVIP*IIGLPI
Trigger: AATTGGAAGACCTATTATGCAAGGAATGACACTGTG...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAACAAAAAGGCAACATGTaGCTCACTGGTGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKQKGNM*LTGGVP
Trigger: TGGCACACCACCAGTGAGGCACATGTTGCCTTTTTG...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACAAAAAGGCAACATGTaGCTCACTGGTGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLQKGNM*LTGGVP
Trigger: TGGCACACCACCAGTGAGGCACATGTTGCCTTTTTG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCCCCTGTCTAAGGTGTTaGTTAAAGACAAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSPCLRC*LKTKRQ
Trigger: TTGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGG...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCATCATCAAATGGGTCTaGATCCCCTTTACGATACTC +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPIIKWV*IPFTIL
Trigger: GAGTATCGTAAAGGGGATCCAGACCCATTTGATGAT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCGCCCAGCATACACTCTaGATCAGCTCGACCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRAQHTL*ISSTRM
Trigger: CATCCTGGTCGAGCTGATCCAGAGTGTATGCTGGGC...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGAGTATTCTCAGCAAGTaGCCCAGCATACACTCTGGA +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMSILSK*PSIHSG
Trigger: TCCAGAGTGTATGCTGGGCCACTTGCTGAGAATACT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAAGAATATGTCCTCAATaGTTGATCGGCCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKRICPQ*LIGLSG
Trigger: GCCCGAGAGGCCGATCAACCATTGAGGACATATTCT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAGAGCTTCCGTGGACTaGGACGCTTGTTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACRASVD*DACFPA
Trigger: GGCAGGAAAACAAGCGTCCCAGTCCACGGAAGCTCT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTATCAGCTGCTGGATCTaGCAGCTGCTGAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACISCWI*QLLKRG
Trigger: GCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGAT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAATTGCAGAACTTGACATaGTCACTGCGCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKLQNLT*SLRLSC
Trigger: GCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAA...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAAGCAGCAGCAGTGACTaGGGTAAAGGCAGAAGAATG +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLSSSSD*GKGRRM
Trigger: CATTCTTCTGCCTTTACCCCAGTCACTGCTGCTGCT...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCTGGGCAGGTGGCAACTaGATTCTTGCAGCGAGCATG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRWAGGN*ILAASM
Trigger: CATGCTCGCTGCAAGAATCCAGTTGCCACCTGCCCA...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGACCACTTCCTTCCTTTaGCTCTTAAGACCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMTTSFL*LLRPSR
Trigger: CCTGCTAGGTCTTAAGAGCCAAAGGAAGGAAGTGGT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCCCAAAACTTCTTCTCTaGGCTACCTATCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPPKLLL*ATYLPS
Trigger: TGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGG...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCTATGTCCTCAATGGTTaGTCGGCCTCTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSYVLNG*SASRAH
Trigger: ATGGGCCCGAGAGGCCGATCAACCATTGAGGACATA...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCTGCTTTTAGGGTTCTaGGGCAGCTTTCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACLLLGF*GSFLRG
Trigger: TCCTCGGAGAAAGCTGCCTCAGAACCCTAAAAGCAG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGGCTTCCCGGAACACTaGAATAGGACGGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLGFPEH*NRTESA
Trigger: AGCAGATTCCGTCCTATTTCAGTGTTCCGGGAAGCC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGAACCGCTCCCGTGCTaGGAATGCACAGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQREPLPC*ECTAGE
Trigger: TTCACCTGCTGTGCATTCTCAGCACGGGAGCGGTTC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCTGTTCCCGTGTGATTaGACACCACGCGACACTGAT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACLFPCD*TPRDTD
Trigger: ATCAGTGTCGCGTGGTGTTCAATCACACGGGAACAG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTATCACTGTTCCCGTGTaGTTGAACACCACGCGACAC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACITVPV*LNTTRH
Trigger: GTGTCGCGTGGTGTTCAATCACACGGGAACAGTGAT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAAATGTTCGGAAGGATaGCCCAAAGGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHKCSEG*PKGAFH
Trigger: ATGAAAAGCCCCTTTGGGTCATCCTTCCGAACATTT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTACCCTCGGGTGCCAATaGGGCTCTCTAAGCCATAAT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACTLGCQ*GSLSHN
Trigger: ATTATGGCTTAGAGAGCCTCATTGGCACCCGAGGGT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGAGCATGGCAGCATCCTaGAGCATGAGAACACTCCAT +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASESMAAS*SMRTLH
Trigger: ATGGAGTGTTCTCATGCTTCAGGATGCTGCCATGCT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGTTGTCAAGCCAACCTaGATTCTGCCTCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKVVKPT*ILPPCY
Trigger: ATAACAGGGAGGCAGAATTCAGGTTGGCTTGACAAC...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAGTCCTGGTGATTTTATaGGACTGCCCCACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLVLVIL*DCPTEK
Trigger: TTTCTCAGTGGGGCAGTCTCATAAAATCACCAGGAC...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCTGTTCCTTTTCCCACTaGTCCAGCAGGGTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRCSFSH*SSRVVS
Trigger: GCTCACTACCCTGCTGGAGCAGTGGGAAAAGGAACA...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCCATGTCCTGCCCACTaGCATGTTCCTTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACPCPAH*HVPFPT
Trigger: AGTGGGAAAAGGAACATGGCAGTGGGCAGGACATGG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCATGTCCTGCCCACTaGCATGTTCCTTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLPCPAH*HVPFPT
Trigger: AGTGGGAAAAGGAACATGGCAGTGGGCAGGACATGG...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGATCTTGGCCAGGGTGTaGTCACTGCTTTTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEILARV*SLLLGF
Trigger: GAACCCTAAAAGCAGTGAGCACACCCTGGCCAAGAT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCAATCAAAGGGGAGTTaGCTGCATAAGATGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACQSKGS*LHKMGR
Trigger: CCGGCCCATCTTATGCAGGCAACTCCCCTTTGATTG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCTGCTAAAGATAAGGTaGCTATCAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHLLKIR*LSKHPP
Trigger: TGGCGGATGCTTTGATAGGCACCTTATCTTTAGCAG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCAGGTTTGTAGTCAGTTaGATTAAATGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSRFVVS*IKCSEG
Trigger: TCCTTCCGAACATTTAATGCAACTGACTACAAACCT...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGGTCCCCATCTTCCCCTaGGTTCTCATTATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEVPIFP*VLIIVV
Trigger: GACGACAATAATGAGAACGCAGGGGAAGATGGGGAC...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTCTGAATGCAGGGCATaGAGCTCCTTAAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHSECRA*SSLKDR
Trigger: TCTGTCTTTTAAGGAGCTGCATGCCCTGCATTCAGA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCCACTGTTCTCATGCTaGCTCCTAAGTGACTCCGAT +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEPLFSC*LLSDSD
Trigger: ATCGGAGTCACTTAGGAGGCAGCATGAGAACAGTGG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGTGCCACTGTTCTCATaGTGCCTCCTAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLVPLFS*CLLSDS
Trigger: GGAGTCACTTAGGAGGCAGCATGAGAACAGTGGCAC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAGTCACAGGCCAGAGCTaGCTTGGTATGTTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLVTGQS*LGMLLS
Trigger: ACTTAACAACATACCAAGGCAGCTCTGGCCTGTGAC...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGAAGGAGATCCTTGACTaGGCAACAACATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQKEILD*ATTSAF
Trigger: GAAAGCAGATGTTGTTGCCCAGTCAAGGATCTCCTT...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCACTGTCCAGCGTAGGTaGGGAAGGAAGATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRTVQRR*GRKMSV
Trigger: GACAGACATCTTCCTTCCCCACCTACGCTGGACAGT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCAGAAAGGTGGGCAGGTaGCAACTGGATTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRRKVGR*QLDSCS
Trigger: GCTGCAAGAATCCAGTTGCCACCTGCCCACCTTTCT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCTTGCCGCCTCTGTTTTaGCTCAGGACATTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLPPLF*LRTLVR
Trigger: CCTCACCAATGTCCTGAGCCAAAACAGAGGCGGCAA...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCACCTCCAGTCCATTTaGATGGAAAACACCACTGAT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHHLQSI*MENTTD
Trigger: ATCAGTGGTGTTTTCCATCCAAATGGACTGGAGGTG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCGCGCAACAAATTCTGTaGCAAATTTGTTATGGAGCA +
Preference number: 4 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPAQQIL*QICYGA
Trigger: TGCTCCATAACAAATTTGCCACAGAATTTGTTGCGC...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTTACGGGGGTTGTGGGTaGACAAGAATGCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSYGGCG*TRMPPS
Trigger: TGAGGGTGGCATTCTTGTCCACCCACAACCCCCGTA...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGGCTTTACCTGCCCCTaGAGAGTTTTAGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLGFTCP*RVLAVL
Trigger: CAAGACGGCTAAAACTCTCCAGGGGCAGGTAAAGCC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGTCAGACTATTCCACTaGTTAAGTGTTTACTACCAT +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQVRLFH*LSVYYH
Trigger: ATGGTAGTAAACACTTAACCAGTGGAATAGTCTGAC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCGCAGGCACACTGCAGTaGTTTTCCTGCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSAGTLQ*FSCSSP
Trigger: TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGC...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTCGCCAGAAACAGGAGTaGGTCTTGTCCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSRQKQE*VLSCCR
Trigger: CCTGCAACAGGACAAGACCCACTCCTGTTTCTGGCG...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTTTCCAGCCCTGGCATaGTGTCTAATAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACFPALA*CLIGVC
Trigger: GCAGACTCCTATTAGACATCATGCCAGGGCTGGAAA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCCTCTCGGGCCCATTTaGAAAGATTCTCGACAATTC +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEPLGPI*KDSRQF
Trigger: GAATTGTCGAGAATCTTTTCAAATGGGCCCGAGAGG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCAGGGAAGGAGATCCTTaGCTGGGCAACAACATCTGC +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSREGDP*LGNNIC
Trigger: GCAGATGTTGTTGCCCAGTCAAGGATCTCCTTCCCT...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTGCCTTGATTCTCAATaGCAGCAAGATAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHCLDSQ*QQDSSL
Trigger: AAGACTGCTATCTTGCTGTCATTGAGAATCAAGGCA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGTGCCTTGATTCTCAATaGCAGCAAGATAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMCLDSQ*QQDSSL
Trigger: AAGACTGCTATCTTGCTGTCATTGAGAATCAAGGCA...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGATCTCTTCCAAGCAGTaGTGGCTCCTCACTCATTCA +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEISSKQ*WLLTHS
Trigger: TGAATGAGTGAGGAGCCATCACTGCTTGGAAGAGAT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGATGAGACTGCCCCACTaGGAAAACTTACTTACTTCA +
Preference number: 4 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQMRLPH*ENLLTS
Trigger: TGAAGTAAGTAAGTTTTCTCAGTGGGGCAGTCTCAT...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCGGACGCTTGTTTTCCTaGCGCAAAGCCACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSGRLFS*RKATSC
Trigger: ACAGGAAGTGGCTTTGCGGCAGGAAAACAAGCGTCC...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCATCTTGGCCAGGGTGTaGTCACTGCTTTTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRILARV*SLLLGF
Trigger: GAACCCTAAAAGCAGTGAGCACACCCTGGCCAAGAT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGAGTTTACTGATGATCTaGCGGACAGTGCTACTGCGA +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASESLLMI*RTVLLR
Trigger: TCGCAGTAGCACTGTCCGGCAGATCATCAGTAAACT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAACAACATCTGCTTTCTaGAGTCGTGCTAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKTTSAF*SRARET
Trigger: TGTTTCCCTAGCACGACTGCAGAAAGCAGATGTTGT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAATTTTGTCAGCACGGTTaGTGTTTCTCCAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKFCQHG*CFSKPF
Trigger: AAAGGGCTTGGAGAAACAGCAACCGTGCTGACAAAA...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCCATGGTCCGACTTCTaGCGCAACACTCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRPWSDF*RNTLIF
Trigger: GAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCTTCATTCCCCAAAGTaGAGACAAAGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLHSPK*RQRLAP
Trigger: TGGAGCCAGCCTTTGTCTGCACTTTGGGGAATGAAG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGTCTTCTGTGAAGGAATaGTTCATATCAAATACTGAC +
Preference number: 4 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQSSVKE*FISNTD
Trigger: GTCAGTATTTGATATGAAGCATTCCTTCACAGAAGA...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGTCATCTTCATCATCTaGCTGCAACATAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHVIFII*LQHSSI
Trigger: TATGGAGCTATGTTGCAGGCAGATGATGAAGATGAC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGTCATCTTCATCATCTaGCTGCAACATAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMVIFII*LQHSSI
Trigger: TATGGAGCTATGTTGCAGGCAGATGATGAAGATGAC...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCGTCCCCATCTTCCCCTaGGTTCTCATTATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRVPIFP*VLIIVV
Trigger: GACGACAATAATGAGAACGCAGGGGAAGATGGGGAC...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAAAAGGGTATAATTGGTaGCAATCACCCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKKGYNW*QSPRET
Trigger: TGTCTCCCTGGGTGATTGGCACCAATTATACCCTTT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACAGCAGGGCTTTACCTaGCCCTGGAGAGTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRQQGFT*PWRVLA
Trigger: GGCTAAAACTCTCCAGGGGCAGGTAAAGCCCTGCTG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATATCATCAAATGGGTCTaGATCCCCTTTACGATACTC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHIIKWV*IPFTIL
Trigger: GAGTATCGTAAAGGGGATCCAGACCCATTTGATGAT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTTGCAGAACTTGACATaGTCACTGCGCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACLQNLT*SLRLSC
Trigger: GCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCAGCAGCAGCAGTGACTaGGGTAAAGGCAGAAGAATG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRSSSSD*GKGRRM
Trigger: CATTCTTCTGCCTTTACCCCAGTCACTGCTGCTGCT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCAGAAAGGTGGGCAGGTaGCAACTGGATTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSRKVGR*QLDSCS
Trigger: GCTGCAAGAATCCAGTTGCCACCTGCCCACCTTTCT...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTAGAAAGGTGGGCAGGTaGCAACTGGATTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSRKVGR*QLDSCS
Trigger: GCTGCAAGAATCCAGTTGCCACCTGCCCACCTTTCT...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCAGTGCAGACAAAGGCTaGCTCCAAGTAGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRSADKG*LQVADV
Trigger: GACATCTGCTACTTGGAGCCAGCCTTTGTCTGCACT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTCCGATGACCCGATCCTaGGAGTGCTTACTGAACTCA +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSPMTRS*ECLLNS
Trigger: TGAGTTCAGTAAGCACTCCCAGGATCGGGTCATCGG...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTGTCAAACTTGTGGATaGCCTGTGCAGAGCGGACAT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACCQTCG*PVQSGH
Trigger: ATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAACTTGTCAAACTTGTaGATGGCCTGTGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACNLSNL*MACAER
Trigger: CCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCAAGATAGCAGTCTTTaGTGTCTGTACACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHQDSSL*CLYTGQ
Trigger: TTGACCTGTGTACAGACACCAAAGACTGCTATCTTG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACTTGTACGGGGGTTGTaGGTGGACAAGAATGCCACC +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRLVRGL*VDKNAT
Trigger: GGTGGCATTCTTGTCCACCCACAACCCCCGTACAAG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGATAATCTGAAGTGCTaGCTTCTGAATTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHDNLKC*LLNFSI
Trigger: GATGCTGAAATTCAGAAGTCAGCACTTCAGATTATC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTATGCCGTTGTTGGACTaGACCACATTCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACMPLLD*TTFHIL
Trigger: CAAGATGTGGAATGTGGTTCAGTCCAACAACGGCAT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCATACTTGCAGAACTTaGCATGGTCACTGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRHTCRT*HGHCAC
Trigger: ACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGAGAAGTGGTTTTCCTaGCACCCGTTCAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACEKWFS*HPFNEF
Trigger: GAACTCATTGAACGGGTGTCAGGAAAACCACTTCTC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGATCTGCCGCAACACTCTaGTTTTCCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRSAATL*FSCHCR
Trigger: CCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGA...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAGAATGCACAGCAGGTaGAGCCACTCTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACRMHSR*SHSHLH
Trigger: ATGAAGATGAGAGTGGCTTCACCTGCTGTGCATTCT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAATGCCTTGATTCTCAATaGCAGCAAGATAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKCLDSQ*QQDSSL
Trigger: AAGACTGCTATCTTGCTGTCATTGAGAATCAAGGCA...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTATCTCTTCCAAGCAGTaGTGGCTCCTCACTCATTCA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACISSKQ*WLLTHS
Trigger: TGAATGAGTGAGGAGCCATCACTGCTTGGAAGAGAT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGTGGCCTGAATCAAGATaGAAGGAGATCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEWPESR*KEISMS
Trigger: AGACATGGAGATCTCCTTTCATCTTGATTCAGGCCA...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACCACCCTCAGTCCTCTaGAGTGACTGCTTCACTTGT +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRPPSVL*SDCFTC
Trigger: ACAAGTGAAGCAGTCACTTCAGAGGACTGAGGGTGG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACATGAAGCAAAGAGCTaGGTGAGTCCTCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRHEAKS*VSPLLS
Trigger: GGAGAGCAGAGGACTCACTCAGCTCTTTGCTTCATG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAATGAGACTGCCCCACTaGGAAAACTTACTTACTTCA +
Preference number: 4 (lower is better)
Translates to: VPREDTSTFALSNPSSEKMRLPH*ENLLTS
Trigger: TGAAGTAAGTAAGTTTTCTCAGTGGGGCAGTCTCAT...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCATAGGTACCATGTCCTaGCCACTGCCATGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRIGTMS*PLPCSF
Trigger: AAAGGAACATGGCAGTGGGCAGGACATGGTACCTAT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGCTTGTCATCACATATaGATTCACCAGTGCATTCAT +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHACHHI*IHQCIH
Trigger: ATGAATGCACTGGTGAATGCATATGTGATGACAAGC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGACAACATCTGCTTTCTaGAGTCGTGCTAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASETTSAF*SRARET
Trigger: TGTTTCCCTAGCACGACTGCAGAAAGCAGATGTTGT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAAGTTTATTGGCGCTTaGCGCCTCTGTTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACKFIGA*RLCFGS
Trigger: TGAGCCAAAACAGAGGCGGCAAGCGCCAATAAACTT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCACTCAGTTTCTCGCCTaGCAAGAATCTCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRTQFLA*QESLPS
Trigger: GCTTGGAAGAGATTCTTGGCAGGCGAGAAACTGAGT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAACAGCTCAACAAACATaGGATCTGGATCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLTAQQT*DLDQKM
Trigger: CATCTTCTGATCCAGATCGCATGTTTGTTGAGCTGT...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACTGCAGTGGTTTTCCTaGAGCTCTCCAACAAACGCC +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRLQWFS*SSPTNA
Trigger: GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAGTATTCTCAGCAAGTaGCCCAGCATACACTCTGGA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACSILSK*PSIHSG
Trigger: TCCAGAGTGTATGCTGGGCCACTTGCTGAGAATACT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTAGAAGAGAGCTTCCGTaGACTGGGACGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSRRELP*TGTLVF
Trigger: GAAAACAAGCGTCCCAGTCCACGGAAGCTCTCTTCT...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCAGAAGCTTCCTCTTaGTCTCCATCCACTACATCT +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLPEASS*SPSTTS
Trigger: AGATGTAGTGGATGGAGACCAAGAGGAAGCTTCTGG...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGAGGCCAGAGCTGCCTTaGTATGTTGTTAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASERPELP*YVVKSK
Trigger: TTTGGACTTAACAACATACCAAGGCAGCTCTGGCCT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCATTCCCTCCTTTTCTTaGAAGACGACAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRIPSFS*KTTAVS
Trigger: GGAAACTGCTGTCGTCTTTCAAGAAAAGGAGGGAAT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCTTGGCAGCAATGTCTTaGTTTTCCATAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLAAMS*FSIAPP
Trigger: AGGAGGTGCTATGGAAAATCAAGACATTGCTGCCAA...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCAGAATGCACAGCAGGTaGAGCCACTCTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSRMHSR*SHSHLH
Trigger: ATGAAGATGAGAGTGGCTTCACCTGCTGTGCATTCT...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCATTCAGAGATAAGATaGTGTCATCTTCCAAATCAG +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHHSEIR*CHLPNQ
Trigger: CTGATTTGGAAGATGACATCATCTTATCTCTGAATG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCCCAGGGAGACATTTCTaGCCAACTGCTATTAGACAG +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSPGRHF*PTAIRQ
Trigger: CTGTCTAATAGCAGTTGGTCAGAAATGTCTCCCTGG...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTAATTTAATGGCCAGGTaGGCCTCAAAGTATTTGCGC +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLNLMAR*ASKYLR
Trigger: GCGCAAATACTTTGAGGCTCACCTGGCCATTAAATT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTAATAAGGAAGACAGCTaGTGCCTCCTTAGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSNKEDS*CLLSPL
Trigger: TAAGGGGCTAAGGAGGCATCAGCTGTCTTCCTTATT...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTACAACATCTGCTTTCTaGAGTCGTGCTAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACTTSAF*SRARET
Trigger: TGTTTCCCTAGCACGACTGCAGAAAGCAGATGTTGT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTTTTGTCAGCACGGTTaGTGTTTCTCCAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACFCQHG*CFSKPF
Trigger: AAAGGGCTTGGAGAAACAGCAACCGTGCTGACAAAA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTCTGCTAAAGATAAGGTaGCTATCAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLLLKIR*LSKHPP
Trigger: TGGCGGATGCTTTGATAGGCACCTTATCTTTAGCAG...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCCACTTCATACAGCCTaGATACTGTGTCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACPLHTA*ILCPCS
Trigger: TGAACATGGACACAGTATGCAGGCTGTATGAAGTGG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCTTCCACCTCCTCATCTaGATCAGAGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSFHLLI*IRVFIL
Trigger: GAGGATGAAGACTCTGATGCAGATGAGGAGGTGGAA...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTATGTCGATCATCAAATaGGTCTGGATCCCCTTTACG +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACMSIIK*VWIPFT
Trigger: CGTAAAGGGGATCCAGACCCATTTGATGATCGACAT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCAGTATTCTCAGCAAGTaGCCCAGCATACACTCTGGA +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSSILSK*PSIHSG
Trigger: TCCAGAGTGTATGCTGGGCCACTTGCTGAGAATACT...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCAAGGAGATCCTTGACTaGGCAACAACATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRKEILD*ATTSAF
Trigger: GAAAGCAGATGTTGTTGCCCAGTCAAGGATCTCCTT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCACTCTCATCTTCATTaGCTTCCCGGAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACHSHLH*LPGTLK
Trigger: TTTCAGTGTTCCGGGAAGCCAATGAAGATGAGAGTG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAAAGACAGACAGCCCTaGGAGAAAGAGAAGGGAATA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACKDRQP*EKEKGI
Trigger: TATTCCCTTCTCTTTCTCCCAGGGCTGTCTGTCTTT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGATAAAGGGTATAATTaGTGCCAATCACCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLDKGYN*CQSPRE
Trigger: CTCCCTGGGTGATTGGCACCAATTATACCCTTTATC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCAGAGGGGTCAAATATTaGAGAATGAGTCGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSRGVKY*RMSRCS
Trigger: CGAGCAGCGACTCATTCTCCAATATTTGACCCCTCT...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGTCAGACAGAACATTGTaGGGATGCATGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASESDRTL*GCMQTL
Trigger: AAGAGTTTGCATGCATCCCCACAATGTTCTGTCTGA...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTACTGATTCTGCCAACTaGAGCTGGATTTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSTDSAN*SWIFGT
Trigger: GGTGCCAAAAATCCAGCTCCAGTTGGCAGAATCAGT...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCTTGGCAGCAATGTCTTaGTTTTCCATAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSLAAMS*FSIAPP
Trigger: AGGAGGTGCTATGGAAAATCAAGACATTGCTGCCAA...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACATACTTGCAGAACTTaGCATGGTCACTGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRHTCRT*HGHCAC
Trigger: ACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAAGATGTGTGATGGCTaGGTTGTGACAGTTATAGCT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACKMCDG*VVTVIA
Trigger: AGCTATAACTGTCACAACTCAGCCATCACACATCTT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGACAGTATGCAAAAGATaGAAAGTTCGAAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASETVCKR*KVRRSQ
Trigger: TTGGGACCTTCGAACTTTTCATCTTTTGCATACTGT...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCTGGCCTGAATCAAGATaGAAGGAGATCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSWPESR*KEISMS
Trigger: AGACATGGAGATCTCCTTTCATCTTGATTCAGGCCA...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTCTCAGAAGTGCACCCTaGTCTTCCAAATTTAGAATC +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLLRSAP*SSKFRI
Trigger: GATTCTAAATTTGGAAGATCAGGGTGCACTTCTGAG...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAATAGGTACCATGTCCTaGCCACTGCCATGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRIGTMS*PLPCSF
Trigger: AAAGGAACATGGCAGTGGGCAGGACATGGTACCTAT...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTTTTTGTCAGCACGGTTaGTGTTTCTCCAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSFCQHG*CFSKPF
Trigger: AAAGGGCTTGGAGAAACAGCAACCGTGCTGACAAAA...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAAAGTTTATTGGCGCTTaGCGCCTCTGTTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRKFIGA*RLCFGS
Trigger: TGAGCCAAAACAGAGGCGGCAAGCGCCAATAAACTT...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTCTTCTGTGAAGGAATaGTTCATATCAAATACTGAC +
Preference number: 4 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHSSVKE*FISNTD
Trigger: GTCAGTATTTGATATGAAGCATTCCTTCACAGAAGA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGTCTTCTGTGAAGGAATaGTTCATATCAAATACTGAC +
Preference number: 4 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMSSVKE*FISNTD
Trigger: GTCAGTATTTGATATGAAGCATTCCTTCACAGAAGA...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTAGAACATTGTGGGGATaGATGCAAACTCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLRTLWG*MQTLSM
Trigger: CATGGAAAGAGTTTGCATGCATCCCCACAATGTTCT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGAGCCTCAAAGTATTTaGGCAAGGCCATGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQREPQSI*ARPCRY
Trigger: ATACCTGCATGGCCTTGCGCAAATACTTTGAGGCTC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACACAGTGTCATTCCTTaGATAATAGGTCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLHSVIP*IIGLPI
Trigger: AATTGGAAGACCTATTATGCAAGGAATGACACTGTG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGGATATTCGGTTATCTaGGCCACACACACAATTGAT +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACGYSVI*ATHTID
Trigger: ATCAATTGTGTGTGTGGCCCAGATAACCGAATATCC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCGTTGTTGGCAAGATCTaGGTTAAACAGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRVVGKI*VKQSQQ
Trigger: CTGTTGACTCTGTTTAACCCAGATCTTGCCAACAAC...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTTCCAGTCCATTTGGATaGAAAACACCACTGATGTTC +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACSSPFG*KTPLMF
Trigger: GAACATCAGTGGTGTTTTCCATCCAAATGGACTGGA...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTTCCAGTCCATTTGGATaGAAAACACCACTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLSSPFG*KTPLMF
Trigger: GAACATCAGTGGTGTTTTCCATCCAAATGGACTGGA...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGATAAAGGGTATAATTaGTGCCAATCACCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSDKGYN*CQSPRE
Trigger: CTCCCTGGGTGATTGGCACCAATTATACCCTTTATC...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGATAATCTGAAGTGCTaGCTTCTGAATTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLDNLKC*LLNFSI
Trigger: GATGCTGAAATTCAGAAGTCAGCACTTCAGATTATC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCTTCATATCAAATACTaGCTTCATTCCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLHIKY*LHSPKC
Trigger: GCACTTTGGGGAATGAAGTCAGTATTTGATATGAAG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTACAGTATGCAAAAGATaGAAAGTTCGAAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACTVCKR*KVRRSQ
Trigger: TTGGGACCTTCGAACTTTTCATCTTTTGCATACTGT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACTCAGGTTTGGTTGTTaGGTTCACTCTGCTACTAGT +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRLRFGC*VHSATS
Trigger: ACTAGTAGCAGAGTGAACTCAACAACCAAACCTGAG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTATCTGGATCAGAAGATaGGAAACCCAACTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLIWIRR*ETQLLL
Trigger: AAGCAAAAGTTGGGTTTCTCATCTTCTGATCCAGAT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGTGATCCAAGTTGCATaGATATGGGAAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRVIQVA*IWEVAP
Trigger: AGGAGCTACTTCCCATATTCATGCAACTTGGATCAC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCTGTCTAATAGGAGTCTaGAAGCTGCAGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRCLIGV*KLQCLK
Trigger: CTTTAAACACTGCAGCTTGCAGACTCCTATTAGACA...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGGCTTGTCATCACATATaGATTCACCAGATTCATGAA +
Preference number: 4 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEACHHI*IHQIHE
Trigger: TTCATGAATCTGGTGAATGCATATGTGATGACAAGC...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504652.5
CDS-3UTR TCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCATAGTGATCTTCTGTaGAGGAATGCTTCATATCAA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACHSDLL*RNASYQ
Trigger: TTGATATGAAGCATTCCTTCACAGAAGATCACTATG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR TCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGATCCACAATCTGTTCATaGGTATATGAGCATGCCTTG +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRSTICS*VYEHAL
Trigger: CAAGGCATGCTCATATACTCATGAACAGATTGTGGA...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCGAGTCAACAGCTTGTTaGCAGTCTGAATATCATAAA +
Preference number: 4 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRESTAC*QSEYHK
Trigger: TTTATGATATTCAGACTGGCAACAAGCTGTTGACTC...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAGGTTTGTAGTCAGTTaGATTAAATGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RDKRPGGYKFIPSVINACRFVVS*IKCSEG
Trigger: TCCTTCCGAACATTTAATGCAACTGACTACAAACCT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAACAGCTCAACAAACATaGGATCTGGATCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRTAQQT*DLDQKM
Trigger: CATCTTCTGATCCAGATCGCATGTTTGTTGAGCTGT...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGTTGTTGGCAAGATCTaGGTTAAACAGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRVVGKI*VKQSQQ
Trigger: CTGTTGACTCTGTTTAACCCAGATCTTGCCAACAAC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR TCA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCCATTCAGAGATAAGATaGTGTCATCTTCCAAATCAG +
Preference number: 4 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSHSEIR*CHLPNQ
Trigger: CTGATTTGGAAGATGACATCATCTTATCTCTGAATG...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGATGTCTAATAGGAGTCTaGAAGCTGCAGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRCLIGV*KLQCLK
Trigger: CTTTAAACACTGCAGCTTGCAGACTCCTATTAGACA...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGAGTCAACAGCTTGTTaGCAGTCTGAATATCATAAA +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSESTAC*QSEYHK
Trigger: TTTATGATATTCAGACTGGCAACAAGCTGTTGACTC...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGCGCAACAAATTCTGTaGCAAATTTGTTATGGAGCA +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRAQQIL*QICYGA
Trigger: TGCTCCATAACAAATTTGCCACAGAATTTGTTGCGC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGTATGTTTCCCAGTTTaGCGGCTAGCAAATATTTCA +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRVCFPV*RLANIS
Trigger: TGAAATATTTGCTAGCCGCCAAACTGGGAAACATAC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CCA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGTCAGACTATTCCACTaGTTAAGTGTTTACTACCAT +
Preference number: 4 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSVRLFH*LSVYYH
Trigger: ATGGTAGTAAACACTTAACCAGTGGAATAGTCTGAC...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR GCA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGAGTCAACAGCTTGTTaGCAGTCTGAATATCATAAA +
Preference number: 4 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRESTAC*QSEYHK
Trigger: TTTATGATATTCAGACTGGCAACAAGCTGTTGACTC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGGGCCAGGGCCCGGATTaGGTCTGCATCTGTGATGGG +
Preference number: 5 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEGQGPD*VCICDG
Trigger: CCCATCACAGATGCAGACCAAATCCGGGCCCTGGCC...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCAGGCCCACTAGGGCTTaGCAGGCCAGGGCCCGGATT +
Preference number: 5 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSRPTRA*QARARI
Trigger: AATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCCT...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACGTGCTCCCAGCAGAGTaGAGACTGGCTCCGTTGAGT +
Preference number: 5 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNVLPAE*RLAPLS
Trigger: ACTCAACGGAGCCAGTCTCAACTCTGCTGGGAGCAC...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS CCA 90 bp CTGCGAGACAGGCCCACTAGGGCTTTGCAGGCCAGGGCCCGGATTTaGTCTGCATCTGTGATGGGCATCTTAATGGACAGTAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LRDRPTRALQARARI*SASVMGILMDSKDR
Trigger: CCTGTCCTTACTGTCCATTAAGATGCCCATCACAGATGCAGACCAAATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCCTGTCTCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCGTGGACTGGGACGCTaGTTTTCCTGCCGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LLQAHCSGFPAALQQTPERGLGR*FSCRKA
Trigger: GGCTTTGCGGCAGGAAAACAAGCGTCCCAGTCCACG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGGCCAGGGCCCGGATTaGGTCTGCATCTGTGATGGG +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQGQGPD*VCICDG
Trigger: CCCATCACAGATGCAGACCAAATCCGGGCCCTGGCC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS GCA 90 bp TGCTGGATCTGGCAGCTGCTGAAAAGGGGCAGTTTACTGATGATCTaGCGGACAGTGCTACTGCGAGACAGGCCCACTAGGGCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: CWIWQLLKRGSLLMI*RTVLLRDRPTRALQ
Trigger: CTGCAAAGCCCTAGTGGGCCTGTCTCGCAGTAGCACTGTCCGGCAGATCATCAGTAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp CTGCGCTTGTCCTGCAGCACAGGCTCCTTCATCAGCTGCTGGATCTaGCAGCTGCTGAAAAGGGGCAGTTTACTGATGATCTGCCGGACA +
Preference number: 5 (lower is better)
Translates to: LRLSCSTGSFISCWI*QLLKRGSLLMICRT
Trigger: TGTCCGGCAGATCATCAGTAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCCTGTGCTGCAGGACAAGCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACGCAGGTCAGCCTCTTTaGTCAGCACGGTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNAGQPL*SARLLF
Trigger: AAACAGCAACCGTGCTGACAAAAGAGGCTGACCTGC...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTGCCTTGTACGGGGGTaGTGGGTGGACAAGAATGCC +
Preference number: 5 (lower is better)
Translates to: LLQAHCSGFPAALQQTPECLVRG*WVDKNA
Trigger: GGCATTCTTGTCCACCCACAACCCCCGTACAAGGCA...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAGTGCTCCCAGCAGAGTaGAGACTGGCTCCGTTGAGT +
Preference number: 5 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPVLPAE*RLAPLS
Trigger: ACTCAACGGAGCCAGTCTCAACTCTGCTGGGAGCAC...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGTGGGTCTTGTCCTGTaGCAGGCACACTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: QAHCSGFPAALQQTPESQVGLVL*QAHCSG
Trigger: ACCACTGCAGTGTGCCTGCAACAGGACAAGACCCAC...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS GCA 90 bp AGGGGTTCAGAAGAGAGCTTCCGTGGACTGGGACGCTTGTTTTCCTaGCGCAAAGCCACTTCCTGTAGCTGTAGCTCCCTCAGTCTTCGA +
Preference number: 5 (lower is better)
Translates to: RGSEESFRGLGRLFS*RKATSCSCSSLSLR
Trigger: TCGAAGACTGAGGGAGCTACAGCTACAGGAAGTGGCTTTGCGGCAGGAAAACAAGCGTCCCAGTCCACGGAAGCTCTCTTCTGAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 90 bp TCAGCAGCATACTTGCAGAACTTGACATGGTCACTGCGCTTGTCCTaGAGCACAGGCTCCTTCATCAGCTGCTGGATCTGGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SAAYLQNLTWSLRLS*STGSFISCWIWQLL
Trigger: CAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp TGGTCACTGCGCTTGTCCTGCAGCACAGGCTCCTTCATCAGCTGCTaGATCTGGCAGCTGCTGAAAAGGGGCAGTTTACTGATGATCTGC +
Preference number: 5 (lower is better)
Translates to: WSLRLSCSTGSFISC*IWQLLKRGSLLMIC
Trigger: GCAGATCATCAGTAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACGTAGTGAGCTCAGCTTaGGAGTCCACATGTACCACT +
Preference number: 5 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNVVSSA*ESTCTT
Trigger: AGTGGTACATGTGGACTCCAAAGCTGAGCTCACTAC...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAGGCCCACTAGGGCTTaGCAGGCCAGGGCCCGGATT +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHRPTRA*QARARI
Trigger: AATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCCT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGAGGCCCACTAGGGCTTaGCAGGCCAGGGCCCGGATT +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMRPTRA*QARARI
Trigger: AATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCCT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCTTTTGTCAGCACGGTaGCTGTTTCTCCAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNLLSAR*LFLQAL
Trigger: AAGGGCTTGGAGAAACAGCAACCGTGCTGACAAAAG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGCCACCCCTCCATACTTaGGAAATGATGCCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: QAHCSGFPAALQQTPESQPPLHT*EMMPCG
Trigger: ACCGCAGGGCATCATTTCCAAAGTATGGAGGGGTGG...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCCCTCCTCTAGAAGGTTaGCTAGCTCCTCATCAGAGG +
Preference number: 5 (lower is better)
Translates to: SGFPAALQQTPESQARAAPPLEG*LAPHQR
Trigger: CCTCTGATGAGGAGCTAGCAAACCTTCTAGAGGAGG...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGTGCCTTGTACGGGGGTaGTGGGTGGACAAGAATGCC +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQCLVRG*WVDKNA
Trigger: GGCATTCTTGTCCACCCACAACCCCCGTACAAGGCA...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS GCA 90 bp ACATGGTCACTGCGCTTGTCCTGCAGCACAGGCTCCTTCATCAGCTaGTGGATCTGGCAGCTGCTGAAAAGGGGCAGTTTACTGATGATC +
Preference number: 5 (lower is better)
Translates to: TWSLRLSCSTGSFIS*WIWQLLKRGSLLMI
Trigger: GATCATCAGTAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 90 bp CATCCTCATCCTCTGCCAGACGCTGCCTGCCCACTTCATACAGCCTaGATACTGTGTCCATGTTCAGGGCATCCATGCTGCCTTGATTCT +
Preference number: 5 (lower is better)
Translates to: HPHPLPDAACPLHTA*ILCPCSGHPCCLDS
Trigger: AGAATCAAGGCAGCATGGATGCCCTGAACATGGACACAGTATGCAGGCTGTATGAAGTGGGCAGGCAGCGTCTGGCAGAGGATGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCACAGGGAAGGAGATCCTaGACTGGGCAACAACATCTG +
Preference number: 5 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPQGRRS*TGQQHL
Trigger: CAGATGTTGTTGCCCAGTCAAGGATCTCCTTCCCTG...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGCAGGGAAGGAGATCCTaGACTGGGCAACAACATCTG +
Preference number: 5 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEQGRRS*TGQQHL
Trigger: CAGATGTTGTTGCCCAGTCAAGGATCTCCTTCCCTG...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGCCACCCCTCCATACTTaGGAAATGATGCCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQPPLHT*EMMPCG
Trigger: ACCGCAGGGCATCATTTCCAAAGTATGGAGGGGTGG...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCACCTCCATCCTCAGGTTaGGTTGTTGAGTTCACTCTG +
Preference number: 5 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPPPSSG*VVEFTL
Trigger: CAGAGTGAACTCAACAACCAAACCTGAGGATGGAGG...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS CCA 90 bp GACACCCGTTCAATGAGTTCAGCAGCATACTTGCAGAACTTGACATaGTCACTGCGCTTGTCCTGCAGCACAGGCTCCTTCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: DTRSMSSAAYLQNLT*SLRLSCSTGSFISC
Trigger: GCAGCTGATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACTCATTGAACGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAGTAGTGAGCTCAGCTTaGGAGTCCACATGTACCACT +
Preference number: 5 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPVVSSA*ESTCTT
Trigger: AGTGGTACATGTGGACTCCAAAGCTGAGCTCACTAC...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCGTGGACTGGGACGCTaGTTTTCCTGCCGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHRGLGR*FSCRKA
Trigger: GGCTTTGCGGCAGGAAAACAAGCGTCCCAGTCCACG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGCGTGGACTGGGACGCTaGTTTTCCTGCCGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMRGLGR*FSCRKA
Trigger: GGCTTTGCGGCAGGAAAACAAGCGTCCCAGTCCACG...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACGCATACTTGCAGAACTaGACATGGTCACTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYAYLQN*TWSLRL
Trigger: CAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGC...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCTTTTGTCAGCACGGTaGCTGTTTCTCCAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYLLSAR*LFLQAL
Trigger: AAGGGCTTGGAGAAACAGCAACCGTGCTGACAAAAG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACCTGATTTTCCTGCCATaGCAGGGTGATGGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHLIFLP*QGDGLS
Trigger: AGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAG...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGTTTTATGGCTGGGCTTaGGCTGTAGGCACCATGGTC +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQFYGWA*AVGTMV
Trigger: GACCATGGTGCCTACAGCCAAAGCCCAGCCATAAAA...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCCTTGCCGCCTCTGTTTaGGCTCAGGACATTGGTGAG +
Preference number: 5 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPLAASV*AQDIGE
Trigger: CTCACCAATGTCCTGAGCCAAAACAGAGGCGGCAAG...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAAAAGTTTATTGGCGCTaGCCGCCTCTGTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPKVYWR*PPLFWL
Trigger: GAGCCAAAACAGAGGCGGCAAGCGCCAATAAACTTT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGTCCAGAAGCTTCCTCTaGGTCTCCATCCACTACATC +
Preference number: 5 (lower is better)
Translates to: QAHCSGFPAALQQTPESQSRSFL*VSIHYI
Trigger: GATGTAGTGGATGGAGACCAAGAGGAAGCTTCTGGA...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCCATCCTCAGGTTTGGTaGTTGAGTTCACTCTGCTAC +
Preference number: 5 (lower is better)
Translates to: SGFPAALQQTPESQARAAHPQVW*LSSLCY
Trigger: GTAGCAGAGTGAACTCAACAACCAAACCTGAGGATG...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCGTATATGAGCATGCCTaGTACGGGGGTTGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPVYEHA*YGGCGW
Trigger: CCACCCACAACCCCCGTACAAGGCATGCTCATATAC...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGGCCAGAGCTGCCACTTCACAACCAAATTaGTCCCCTCTTCTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SGFPAALQQTPESQARAATSQPN*SPLLSA
Trigger: GGCAGAGAGAAGAGGGGACAAATTTGGTTGTGAAGT...GGCAGCTCTGGCCTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS TCA 90 bp CAGCAGCAAGGACCCATCCCTGGAAGGTTCAAGATGTGTGATGGCTaGGTTGTGACAGTTATAGCTGGCCTCCTCCTGTCCACTAAACAC +
Preference number: 5 (lower is better)
Translates to: QQQGPIPGRFKMCDG*VVTVIAGLLLSTKH
Trigger: GTGTTTAGTGGACAGGAGGAGGCCAGCTATAACTGTCACAACTCAGCCATCACACATCTTGAACCTTCCAGGGATGGGTCCTTGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp TCATCATCTTCATCATCATCTTCTTCCTCCTGTTCTTCCTCTTCCTaGTCCTCCTCTTCATCCTCATCCTCTGCCAGACGCTGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSCSSSS*SSSSSSSSARRCLP
Trigger: GGGCAGGCAGCGTCTGGCAGAGGATGAGGATGAAGAGGAGGACCAGGAAGAGGAAGAACAGGAGGAAGAAGATGATGATGAAGATGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCAAGGGGGCTCTCGGCTaGTCATCACATATGCATTCA +
Preference number: 5 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSKGALG*SSHMHS
Trigger: TGAATGCATATGTGATGACAAGCCGAGAGCCCCCTT...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGGCCTCTCGGGCCCATTaGAAAAGATTCTCGACAATT +
Preference number: 5 (lower is better)
Translates to: LLQAHCSGFPAALQQTPEASRAH*KRFSTI
Trigger: AATTGTCGAGAATCTTTTCAAATGGGCCCGAGAGGC...CTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAAGTTCAGCAGCATACTaGCAGAACTTGACATGGTCA +
Preference number: 5 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPSSAAY*QNLTWS
Trigger: TGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACT...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGTGGCAACTGGATTCTaGCAGCGAGCATGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQVATGF*QRACCS
Trigger: AGAACAACATGCTCGCTGCAAGAATCCAGTTGCCAC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACCCACTCTCATCTTCATaGGCTTCCCGGAACACTGAA +
Preference number: 5 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHPLSSS*ASRNTE
Trigger: TTCAGTGTTCCGGGAAGCCAATGAAGATGAGAGTGG...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACTTGAACTTGTCAAACTaGTGGATGGCCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYLNLSN*WMACAE
Trigger: CTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAA...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGGCATCCATGCTGCCTaGATTCTCAATGACAGCAAG +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQGIHAA*ILNDSK
Trigger: CTTGCTGTCATTGAGAATCAAGGCAGCATGGATGCC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCTCCAGAAGCTTCCTCTaGGTCTCCATCCACTACATC +
Preference number: 5 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSSRSFL*VSIHYI
Trigger: GATGTAGTGGATGGAGACCAAGAGGAAGCTTCTGGA...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CACAGCTGCCAGGTACCTAAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCAGGTATGTTTCCCAGTTaGGCGGCTAGCAAATATTTC +
Preference number: 5 (lower is better)
Translates to: HSCQVPKQVSWVQQDTPPGMFPS*AASKYF
Trigger: GAAATATTTGCTAGCCGCCAAACTGGGAAACATACC...TGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTTAGGTACCTGGCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACAAGCTGCAACAAGAGTaGCACACAAGAAAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNKLQQE*HTRKFE
Trigger: CTCAAACTTTCTTGTGTGCAACTCTTGTTGCAGCTT...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGACTTCACAACCAAATTaGTCCCCTCTTCTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QAHCSGFPAALQQTPESQTSQPN*SPLLSA
Trigger: GGCAGAGAGAAGAGGGGACAAATTTGGTTGTGAAGT...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCGCCTCTCGGGCCCATTaGAAAAGATTCTCGACAATT +
Preference number: 5 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSASRAH*KRFSTI
Trigger: AATTGTCGAGAATCTTTTCAAATGGGCCCGAGAGGC...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGATATGTCCTCAATGGTaGATCGGCCTCTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMICPQW*IGLSGP
Trigger: TGGGCCCGAGAGGCCGATCAACCATTGAGGACATAT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGGCCAGGGCCCGGATTaGGTCTGCATCTGTGATGGG +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACGQGPD*VCICDG
Trigger: CCCATCACAGATGCAGACCAAATCCGGGCCCTGGCC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCCTTGCAGCGAGCATGTaGTTCTCTAAGATACTCTGT +
Preference number: 5 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNALAASM*FSKILC
Trigger: ACAGAGTATCTTAGAGAACAACATGCTCGCTGCAAG...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCTTGCCGCCTCTGTTTaGGCTCAGGACATTGGTGAG +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHLAASV*AQDIGE
Trigger: CTCACCAATGTCCTGAGCCAAAACAGAGGCGGCAAG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp GTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCGCCAGAAACCCACTGATGTTCATATaGAACTTGTCAAACTTGTGG +
Preference number: 5 (lower is better)
Translates to: VGYSRTRHHSRVAGTARNPLMFI*NLSNLW
Trigger: CCACAAGTTTGACAAGTTCAATATGAACATCAGTGG...GTTTCTGGCGGTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGAGTCACAGACATCAGACAGAACATaGTGGGGATGCATGCAAACT +
Preference number: 5 (lower is better)
Translates to: QAHCSGFPAALQQTPESQTSDRT*WGCMQT
Trigger: AGTTTGCATGCATCCCCACAATGTTCTGTCTGATGT...CTGTGACTCAGGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCAGGCATCCAGTGCCCCCACCCAGGGTTCAGGCCCTGTCTAAGGTGTTGCTTAAGCTGCCTTGGTATGTaGTTAAGTCCAAAACTTCTT +
Preference number: 5 (lower is better)
Translates to: SGIQCPHPGFRPCLRCCLSCLGM*LSPKLL
Trigger: AAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT...TAAGCAACACCTTAGACAGGGCCTGAACCCTGGGTGGGGGCACTGGATGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS GCA 90 bp GAGTATATGAGCATGCCTTGTACGGGGGTTGTGGGTGGACAAGAATaGCACCCTCAGTCCTCTGAAGTGACTGCTTCACTTGTTCCAATT +
Preference number: 5 (lower is better)
Translates to: EYMSMPCTGVVGGQE*HPQSSEVTASLVPI
Trigger: AATTGGAACAAGTGAAGCAGTCACTTCAGAGGACTGAGGGTGGCATTCTTGTCCACCCACAACCCCCGTACAAGGCATGCTCATATACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp GATCCAGCCTCATCCAACACGTCCACTGATTCTGCCAACTGGAGCTaGATTTTTGGCACCACAGTAAGAATAGCCAGGACATCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: DPASSNTSTDSANWS*IFGTTVRIARTSKA
Trigger: TGCTTTGGATGTCCTGGCTATTCTTACTGTGGTGCCAAAAATCCAGCTCCAGTTGGCAGAATCAGTGGACGTGTTGGATGAGGCTGGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACAATTCCCTCCTTTTCTaGAAAGACGACAGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYNSLLF*KDDSSF
Trigger: GAAACTGCTGTCGTCTTTCAAGAAAAGGAGGGAATT...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGTCTTCGAAGCACTATaGCCACCAGCTGTGAATTTT +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQVFEAL*PPAVNF
Trigger: AAAATTCACAGCTGGTGGCAATAGTGCTTCGAAGAC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCAGGGAAGGAGATCCTaGACTGGGCAACAACATCTG +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHQGRRS*TGQQHL
Trigger: CAGATGTTGTTGCCCAGTCAAGGATCTCCTTCCCTG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGCAGGTCAGCCTCTTTaGTCAGCACGGTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHAGQPL*SARLLF
Trigger: AAACAGCAACCGTGCTGACAAAAGAGGCTGACCTGC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTTTTATGGCTGGGCTTaGGCTGTAGGCACCATGGTC +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHFYGWA*AVGTMV
Trigger: GACCATGGTGCCTACAGCCAAAGCCCAGCCATAAAA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCTGCACACAAGAAAGTTaGAGGAAAACTTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNACTQES*RKTSAG
Trigger: ACCAGCTGAAGTTTTCCTCAAACTTTCTTGTGTGCA...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAGGTGCTCAGGACCCGGAAGAATCATCTACCTCCCAGCTTTGTGAGACAGGCCCTGTCTAAGGTGTaGCTTAAAGACAAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: KQVLRTRKNHLPPSFVRQALSKV*LKDKKA
Trigger: TGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGC...CTGTCTCACAAAGCTGGGAGGTAGATGATTCTTCCGGGTCCTGAGCACCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCAAGACACTTCAACCTTaGCCTTATCCAACCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSKTLQP*PYPTPL
Trigger: AAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTT...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS TCA 90 bp TTCCCTCCTTTTCTTGAAAGACGACAGCAGTTTCCAGCCCTGGCATaGTGTCTAATAGGAGTCTGCAAGCTGCAGTGTTTAAAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: FPPFLERRQQFPALA*CLIGVCKLQCLKGA
Trigger: AGCCCCCTTTAAACACTGCAGCTTGCAGACTCCTATTAGACATCATGCCAGGGCTGGAAACTGCTGTCGTCTTTCAAGAAAAGGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGTAGTGAGCTCAGCTTaGGAGTCCACATGTACCACT +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHVVSSA*ESTCTT
Trigger: AGTGGTACATGTGGACTCCAAAGCTGAGCTCACTAC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGCATACTTGCAGAACTaGACATGGTCACTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHAYLQN*TWSLRL
Trigger: CAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGCAGGTCAGCCTCTTTaGTCAGCACGGTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: VPREDTSTFALSNPSSEKAGQPL*SARLLF
Trigger: AAACAGCAACCGTGCTGACAAAAGAGGCTGACCTGC...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACTGATTTTCCTGCCATaGCAGGGTGATGGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLLIFLP*QGDGLS
Trigger: AGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATTTTATGGCTGGGCTTaGGCTGTAGGCACCATGGTC +
Preference number: 5 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLFYGWA*AVGTMV
Trigger: GACCATGGTGCCTACAGCCAAAGCCCAGCCATAAAA...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATAAAGTTTATTGGCGCTaGCCGCCTCTGTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHKVYWR*PPLFWL
Trigger: GAGCCAAAACAGAGGCGGCAAGCGCCAATAAACTTT...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGAAAGTTTATTGGCGCTaGCCGCCTCTGTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMKVYWR*PPLFWL
Trigger: GAGCCAAAACAGAGGCGGCAAGCGCCAATAAACTTT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGTGGGTCTTGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAATGTTCATATTGAACTaGTCAAACTTGTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: SGSCPVAGTLQWFSCSSPMFILN*SNLWMA
Trigger: GGCCATCCACAAGTTTGACAAGTTCAATATGAACAT...TGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACAAGACCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATGGCATCCATGCTGCCTaGATTCTCAATGACAGCAAG +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHGIHAA*ILNDSK
Trigger: CTTGCTGTCATTGAGAATCAAGGCAGCATGGATGCC...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACCTGCGTTCTCATTATaGTCGTCCTCCTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLPAFSL*SSSSNS
Trigger: GGAGTTGGAGGAGGACGACAATAATGAGAACGCAGG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAACCTCCTCTAGAAGGTTaGCTAGCTCCTCATCAGAGG +
Preference number: 5 (lower is better)
Translates to: VPREDTSTFALSNPSSEKPPLEG*LAPHQR
Trigger: CCTCTGATGAGGAGCTAGCAAACCTTCTAGAGGAGG...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TGTCCTGTTGCAGGCACACTGCAGTGGTTTTCCTGCAGCTCTCCAACAAACGCCCTCTGTCACCCTGTTTaGCTGACTTGTTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: CPVAGTLQWFSCSSPTNALCHPV*LTCFSL
Trigger: TAAAGAAAAACAAGTCAGCAAAACAGGGTGACAGAG...GGCGTTTGTTGGAGAGCTGCAGGAAAACCACTGCAGTGTGCCTGCAACAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AAGCAAGTCAGTTGGGTACAGCAGGACACGCCACCATTCCAGGGTAGCTGGTACCTCTGTCACCCTGTTTaGCTGACTTGTTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: KQVSWVQQDTPPFQGSWYLCHPV*LTCFSL
Trigger: TAAAGAAAAACAAGTCAGCAAAACAGGGTGACAGAG...GTACCAGCTACCCTGGAATGGTGGCGTGTCCTGCTGTACCCAACTGACTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GGAGTAACACCCTGGCATGACATTCCTTCTCTTTCCTGGCCCTCAACCACTTCCGCACAGTGTCATTCCTaGCATAATAGGTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: GVTPWHDIPSLSWPSTTSAQCHS*HNRSSN
Trigger: ATTGGAAGACCTATTATGCAAGGAATGACACTGTGC...GGAAGTGGTTGAGGGCCAGGAAAGAGAAGGAATGTCATGCCAGGGTGTTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGTGGGTCTTGTCCTGTaGCAGGCACACTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLVGLVL*QAHCSG
Trigger: ACCACTGCAGTGTGCCTGCAACAGGACAAGACCCAC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS TCA 90 bp TCCATAGCACCTCCTAACAGTCCAGTAGAATATGTCCTCAATGGTTaGTCGGCCTCTCGGGCCCATTTGAAAAGATTCTCGACAATTCCC +
Preference number: 5 (lower is better)
Translates to: SIAPPNSPVEYVLNG*SASRAHLKRFSTIP
Trigger: GGGAATTGTCGAGAATCTTTTCAAATGGGCCCGAGAGGCCGATCAACCATTGAGGACATATTCTACTGGACTGTTAGGAGGTGCTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp GGATGGAAAACACCACTGATGTTCATATTGAACTTGTCAAACTTGTaGATGGCCTGTGCAGAGCGGACATCCCAGAGGACGCCATCATTT +
Preference number: 5 (lower is better)
Translates to: GWKTPLMFILNLSNL*MACAERTSQRTPSF
Trigger: AAATGATGGCGTCCTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAATATGAACATCAGTGGTGTTTTCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCATATGTCCTCAATGGTaGATCGGCCTCTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRICPQW*IGLSGP
Trigger: TGGGCCCGAGAGGCCGATCAACCATTGAGGACATAT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTATATGTCCTCAATGGTaGATCGGCCTCTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLICPQW*IGLSGP
Trigger: TGGGCCCGAGAGGCCGATCAACCATTGAGGACATAT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTAGTGGCAACTGGATTCTaGCAGCGAGCATGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLVATGF*QRACCS
Trigger: AGAACAACATGCTCGCTGCAAGAATCCAGTTGCCAC...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATTTTTGGCTCAGGACATaGGTGAGGAGTAAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHFWLRT*VRSKEG
Trigger: TCCCTCTTTACTCCTCACCAATGTCCTGAGCCAAAA...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGTTTTGGCTCAGGACATaGGTGAGGAGTAAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMFWLRT*VRSKEG
Trigger: TCCCTCTTTACTCCTCACCAATGTCCTGAGCCAAAA...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCCACCCCTCCATACTTaGGAAATGATGCCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACPPLHT*EMMPCG
Trigger: ACCGCAGGGCATCATTTCCAAAGTATGGAGGGGTGG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACATGTTCATATTGAACTaGTCAAACTTGTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHMFILN*SNLWMA
Trigger: GGCCATCCACAAGTTTGACAAGTTCAATATGAACAT...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGCATCCTCAGGTTTGGTaGTTGAGTTCACTCTGCTAC +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMHPQVW*LSSLCY
Trigger: GTAGCAGAGTGAACTCAACAACCAAACCTGAGGATG...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCTGCACACAAGAAAGTTaGAGGAAAACTTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPCTQES*RKTSAG
Trigger: ACCAGCTGAAGTTTTCCTCAAACTTTCTTGTGTGCA...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCAAGCTGCAACAAGAGTaGCACACAAGAAAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPKLQQE*HTRKFE
Trigger: CTCAAACTTTCTTGTGTGCAACTCTTGTTGCAGCTT...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGCCCGCACAGTGTCATTCCTaGCATAATAGGTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: TSTFALSNPSSEKGVPWPAQCHS*HNRSSN
Trigger: ATTGGAAGACCTATTATGCAAGGAATGACACTGTGC...GGGCCATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGAAGAACTGCCAAGTTTaGGTGAGGAGTAACACCCTG +
Preference number: 5 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQKNCQV*VRSNTL
Trigger: CAGGGTGTTACTCCTCACCAAAACTTGGCAGTTCTT...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS TCA 90 bp ACATTCCACATCTTGGCCAGGGTGTGCTCACTGCTTTTAGGGTTCTaGGGCAGCTTTCTCCGAGGAGTACCAGAGATAAATTTACCAATA +
Preference number: 5 (lower is better)
Translates to: TFHILARVCSLLLGF*GSFLRGVPEINLPI
Trigger: TATTGGTAAATTTATCTCTGGTACTCCTCGGAGAAAGCTGCCTCAGAACCCTAAAAGCAGTGAGCACACCCTGGCCAAGATGTGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCTGATTTTCCTGCCATaGCAGGGTGATGGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLIFLP*QGDGLS
Trigger: AGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCTTGCAGCGAGCATGTaGTTCTCTAAGATACTCTGT +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHLAASM*FSKILC
Trigger: ACAGAGTATCTTAGAGAACAACATGCTCGCTGCAAG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAATTTTGGCTCAGGACATaGGTGAGGAGTAAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: VPREDTSTFALSNPSSEKFWLRT*VRSKEG
Trigger: TCCCTCTTTACTCCTCACCAATGTCCTGAGCCAAAA...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTCTTGCCGCCTCTGTTTaGGCTCAGGACATTGGTGAG +
Preference number: 5 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSLAASV*AQDIGE
Trigger: CTCACCAATGTCCTGAGCCAAAACAGAGGCGGCAAG...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCCACTCTCATCTTCATaGGCTTCCCGGAACACTGAA +
Preference number: 5 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEPLSSS*ASRNTE
Trigger: TTCAGTGTTCCGGGAAGCCAATGAAGATGAGAGTGG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp GTGCCTAGAGAAGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAATTGAACTTGTCAAACTaGTGGATGGCCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: VPREDTSTFALSNPSSEKLNLSN*WMACAE
Trigger: CTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAA...TTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCTTCTCTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCCTGCGTTCTCATTATaGTCGTCCTCCTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRPAFSL*SSSSNS
Trigger: GGAGTTGGAGGAGGACGACAATAATGAGAACGCAGG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTCCTCCTCTAGAAGGTTaGCTAGCTCCTCATCAGAGG +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACPPLEG*LAPHQR
Trigger: CCTCTGATGAGGAGCTAGCAAACCTTCTAGAGGAGG...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGACATCAGACAGAACATaGTGGGGATGCATGCAAACT +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMTSDRT*WGCMQT
Trigger: AGTTTGCATGCATCCCCACAATGTTCTGTCTGATGT...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGACACTTCAACCTTTGCCTTATCCAACCCCTCTTCAGAGAAAGGTGTCCCATGGGTATGTTTCCCAGTTaGGCGGCTAGCAAATATTTC +
Preference number: 5 (lower is better)
Translates to: RHFNLCLIQPLFRERCPMGMFPS*AASKYF
Trigger: GAAATATTTGCTAGCCGCCAAACTGGGAAACATACC...CATGGGACACCTTTCTCTGAAGAGGGGTTGGATAAGGCAAAGGTTGAAGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGTATATGAGCATGCCTaGTACGGGGGTTGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSVYEHA*YGGCGW
Trigger: CCACCCACAACCCCCGTACAAGGCATGCTCATATAC...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CTTTGGCTCTTAAGACCTAGCAGGTTCTGTGAACTCTCAGGCCTTGGCCAGCACAGAGTTTTAGCCGTCTaGTGTTTCTTGTTTACTTCA +
Preference number: 5 (lower is better)
Translates to: LWLLRPSRFCELSGLGQHRVLAV*CFLFTS
Trigger: TGAAGTAAACAAGAAACACAAGACGGCTAAAACTCT...GTGCTGGCCAAGGCCTGAGAGTTCACAGAACCTGCTAGGTCTTAAGAGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS CCA 90 bp AGTGCATTCATGAAATCATCATTCTTGAAGAGTATTCTCAGCAAGTaGCCCAGCATACACTCTGGATCAGCTCGACCAGGATGTCGATCA +
Preference number: 5 (lower is better)
Translates to: SAFMKSSFLKSILSK*PSIHSGSARPGCRS
Trigger: TGATCGACATCCTGGTCGAGCTGATCCAGAGTGTATGCTGGGCCACTTGCTGAGAATACTCTTCAAGAATGATGATTTCATGAATGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000684031.1
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCAAGGGGGCTCTCGGCTaGTCATCACATATGCATTCA +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRKGALG*SSHMHS
Trigger: TGAATGCATATGTGATGACAAGCCGAGAGCCCCCTT...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCTTTTGTCAGCACGGTaGCTGTTTCTCCAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLLSAR*LFLQAL
Trigger: AAGGGCTTGGAGAAACAGCAACCGTGCTGACAAAAG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACTTGCAGCGAGCATGTaGTTCTCTAAGATACTCTGT +
Preference number: 5 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLLAASM*FSKILC
Trigger: ACAGAGTATCTTAGAGAACAACATGCTCGCTGCAAG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGTGGCAACTGGATTCTaGCAGCGAGCATGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACVATGF*QRACCS
Trigger: AGAACAACATGCTCGCTGCAAGAATCCAGTTGCCAC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCCCACTCTCATCTTCATaGGCTTCCCGGAACACTGAA +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRPLSSS*ASRNTE
Trigger: TTCAGTGTTCCGGGAAGCCAATGAAGATGAGAGTGG...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTCCTGCGTTCTCATTATaGTCGTCCTCCTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSPAFSL*SSSSNS
Trigger: GGAGTTGGAGGAGGACGACAATAATGAGAACGCAGG...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS TCA 90 bp AGGATAAAGGGTATAATTGGTGCCAATCACCCAGGGAGACATTTCTaGCCAACTGCTATTAGACAGCTCAACAAACATGCGATCTGGATC +
Preference number: 5 (lower is better)
Translates to: RIKGIIGANHPGRHF*PTAIRQLNKHAIWI
Trigger: GATCCAGATCGCATGTTTGTTGAGCTGTCTAATAGCAGTTGGTCAGAAATGTCTCCCTGGGTGATTGGCACCAATTATACCCTTTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTGCCTCTCGGGCCCATTaGAAAAGATTCTCGACAATT +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACASRAH*KRFSTI
Trigger: AATTGTCGAGAATCTTTTCAAATGGGCCCGAGAGGC...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGAAATACCTGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCATACTTGCAGAACTaGACATGGTCACTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RNTCVTQTHFSVYSKFYSAYLQN*TWSLRL
Trigger: CAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGC...ACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACAGGTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCTTGAACTTGTCAAACTaGTGGATGGCCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRLNLSN*WMACAE
Trigger: CTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAA...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TCCCTCAACTCCACAAAACCAATATCCACAATGACCATGCTGCCCCCAAACCATCCACTGATGTTCATATaGAACTTGTCAAACTTGTGG +
Preference number: 5 (lower is better)
Translates to: SLNSTKPISTMTMLPPNHPLMFI*NLSNLW
Trigger: CCACAAGTTTGACAAGTTCAATATGAACATCAGTGG...ATGGTTTGGGGGCAGCATGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp GTCCAAAACTTCTTCTCTGGGCTACCTATCTTCCTTCATGAAGCAGGTGCTCAGAATTCTGTGGCAAATTaGTTATGGAGCAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: VQNFFSGLPIFLHEAGAQNSVAN*LWSRRD
Trigger: ATCTCTCCTGCTCCATAACAAATTTGCCACAGAATT...CTGAGCACCTGCTTCATGAAGGAAGATAGGTAGCCCAGAGAAGAAGTTTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS GCA 90 bp TCAACAAACATGCGATCTGGATCAGAAGATGAGAAACCCAACTTTTaGTTGGCTTTCCTAAAGTTCTCTCTGTCACCCTGTTTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: STNMRSGSEDEKPNF*LAFLKFSLSPCFAD
Trigger: GTCAGCAAAACAGGGTGACAGAGAGAACTTTAGGAAAGCCAAGCAAAAGTTGGGTTTCTCATCTTCTGATCCAGATCGCATGTTTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 90 bp GCCATAGAAGGACGAGGTATTTCCAGTAATTTCTGTACTCCACCATaGGCAACAAATTCTGTGGCAAATTTGTTATGGAGCAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: AIEGRGISSNFCTPP*ATNSVANLLWSRRD
Trigger: ATCTCTCCTGCTCCATAACAAATTTGCCACAGAATTTGTTGCGCATGGTGGAGTACAGAAATTACTGGAAATACCTCGTCCTTCTATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp ACACTCTGGATCAGCTCGACCAGGATGTCGATCATCAAATGGGTCTaGATCCCCTTTACGATACTCTTCAGTTTCTTTTTCAATCAATTG +
Preference number: 5 (lower is better)
Translates to: TLWISSTRMSIIKWV*IPFTILFSFFFNQL
Trigger: CAATTGATTGAAAAAGAAACTGAAGAGTATCGTAAAGGGGATCCAGACCCATTTGATGATCGACATCCTGGTCGAGCTGATCCAGAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp CCTGGGAGAAAGAGAAGGGAATATGTTCTGAATTCATTTGACTCAGTTTCTCGCGTCTTCGAAGCACTATaGCCACCAGCTGTGAATTTT +
Preference number: 5 (lower is better)
Translates to: PGRKRREYVLNSFDSVSRVFEAL*PPAVNF
Trigger: AAAATTCACAGCTGGTGGCAATAGTGCTTCGAAGAC...GCGAGAAACTGAGTCAAATGAATTCAGAACATATTCCCTTCTCTTTCTCCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAGTTCAGCAGCATACTaGCAGAACTTGACATGGTCA +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACSSAAY*QNLTWS
Trigger: TGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTAGTTCAGCAGCATACTaGCAGAACTTGACATGGTCA +
Preference number: 5 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLSSAAY*QNLTWS
Trigger: TGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGGCATCCATGCTGCCTaGATTCTCAATGACAGCAAG +
Preference number: 5 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRGIHAA*ILNDSK
Trigger: CTTGCTGTCATTGAGAATCAAGGCAGCATGGATGCC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGACCTCCATCCTCAGGTTaGGTTGTTGAGTTCACTCTG +
Preference number: 5 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRPPSSG*VVEFTL
Trigger: CAGAGTGAACTCAACAACCAAACCTGAGGATGGAGG...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTGCCCTGTCTAAGGTGTaGCTTAAAGACAAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLALSKV*LKDKKA
Trigger: TGCCTTTTTGTCTTTAAGCAACACCTTAGACAGGGC...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS TCA 90 bp ACTGCTATTAGACAGCTCAACAAACATGCGATCTGGATCAGAAGATaGGAAACCCAACTTTTGCTTGGCTTTCCTAAAGTTCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: TAIRQLNKHAIWIRR*ETQLLLGFPKVLSV
Trigger: GACAGAGAGAACTTTAGGAAAGCCAAGCAAAAGTTGGGTTTCTCATCTTCTGATCCAGATCGCATGTTTGTTGAGCTGTCTAATAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp AGGATTAAAGGTGGCACAGTTCCTCTTGTAGTTGTTGGCAAGATCTaGGTTAAACAGAGTCAACAGCTTGTTGCCAGTCTGAATATCATA +
Preference number: 5 (lower is better)
Translates to: RIKGGTVPLVVVGKI*VKQSQQLVASLNII
Trigger: TATGATATTCAGACTGGCAACAAGCTGTTGACTCTGTTTAACCCAGATCTTGCCAACAACTACAAGAGGAACTGTGCCACCTTTAATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp GTATTTCCAGTAATTTCTGTACTCCACCATGCGCAACAAATTCTGTaGCAAATTTGTTATGGAGCAGGAGAGATGCTAGGTGCTTTAGTG +
Preference number: 5 (lower is better)
Translates to: VFPVISVLHHAQQIL*QICYGAGEMLGALV
Trigger: CACTAAAGCACCTAGCATCTCTCCTGCTCCATAACAAATTTGCCACAGAATTTGTTGCGCATGGTGGAGTACAGAAATTACTGGAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTAATTCCCTCCTTTTCTaGAAAGACGACAGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACNSLLF*KDDSSF
Trigger: GAAACTGCTGTCGTCTTTCAAGAAAAGGAGGGAATT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCCACTGATGTTCATATaGAACTTGTCAAACTTGTGG +
Preference number: 5 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEPLMFI*NLSNLW
Trigger: CCACAAGTTTGACAAGTTCAATATGAACATCAGTGG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp CCAGAGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTACAGGACATCATTAGTTaGCTTCAGGTCAATATAGAA +
Preference number: 5 (lower is better)
Translates to: PELPWYVVKSKTSSLGYLQDIIS*LQVNIE
Trigger: TTCTATATTGACCTGAAGCAAACTAATGATGTCCTG...TAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS TCA 90 bp GTTTGGCGGCTAGCAAATATTTCATCATCACTCAGAAGTGCACCCTaGTCTTCCAAATTTAGAATCTCCAAAGTACTGATCAAGTTCACC +
Preference number: 5 (lower is better)
Translates to: VWRLANISSSLRSAP*SSKFRISKVLIKFT
Trigger: GGTGAACTTGATCAGTACTTTGGAGATTCTAAATTTGGAAGATCAGGGTGCACTTCTGAGTGATGATGAAATATTTGCTAGCCGCCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS-3UTR CAA 90 bp TGCTTTCACTACTTGATTGTTAACCTGTTTTCTTCTGATGCCATCAGTACCAGCAATTCCCTCCTTTTCTaGAAAGACGACAGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: CFHYLIVNLFSSDAISTSNSLLF*KDDSSF
Trigger: GAAACTGCTGTCGTCTTTCAAGAAAAGGAGGGAATT...GCTGGTACTGATGGCATCAGAAGAAAACAGGTTAACAATCAAGTAGTGAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp ACTATTCCACTGGTTAAGTGTTTACTACCATTAAAGCGAGGCATGAAGCAAAGAGTCTTCGAAGCACTATaGCCACCAGCTGTGAATTTT +
Preference number: 5 (lower is better)
Translates to: TIPLVKCLLPLKRGMKQRVFEAL*PPAVNF
Trigger: AAAATTCACAGCTGGTGGCAATAGTGCTTCGAAGAC...TCTTTGCTTCATGCCTCGCTTTAATGGTAGTAAACACTTAACCAGTGGAATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCCTGTATGTTCATATTGAACTaGTCAAACTTGTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: RDKRPGGYKFIPSVINACMFILN*SNLWMA
Trigger: GGCCATCCACAAGTTTGACAAGTTCAATATGAACAT...ACAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTCTTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335891.5
CDS-3UTR CAA 90 bp TGTGTGACACAGACCCACTTCAGTGTGTACAGCAAATTCTATAGTGCTTCTGAGCAGGACATCATTAGTTaGCTTCAGGTCAATATAGAA +
Preference number: 5 (lower is better)
Translates to: CVTQTHFSVYSKFYSASEQDIIS*LQVNIE
Trigger: TTCTATATTGACCTGAAGCAAACTAATGATGTCCTG...CTCAGAAGCACTATAGAATTTGCTGTACACACTGAAGTGGGTCTGTGTCACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS-3UTR CAA 90 bp AGCTGCCTTGGTATGTTGTTAAGTCCAAAACTTCTTCTCTGGGCTACCTATCTTAATTCTGTGGCAAATTaGTTATGGAGCAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: SCLGMLLSPKLLLWATYLNSVAN*LWSRRD
Trigger: ATCTCTCCTGCTCCATAACAAATTTGCCACAGAATT...AAGATAGGTAGCCCAGAGAAGAAGTTTTGGACTTAACAACATACCAAGGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS GCA 90 bp ACACAAGAAAGTTTGAGGAAAACTTCAGCTGGTTCCCAATATAGCTaGGCTGGGCCATATTCTATCAAAAATTCCATCATTTCCACAATC +
Preference number: 5 (lower is better)
Translates to: TQESLRKTSAGSQYS*AGPYSIKNSIISTI
Trigger: GATTGTGGAAATGATGGAATTTTTGATAGAATATGGCCCAGCGCAGCTATATTGGGAACCAGCTGAAGTTTTCCTCAAACTTTCTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 90 bp AGGTCCCAAATCTCAGTATTAATGATCACCTCCAGTCCATTTGGATaGAAAACACCACTGATGTTCATATTGAACTTGTCAAACTTGTGG +
Preference number: 5 (lower is better)
Translates to: RSQISVLMITSSPFG*KTPLMFILNLSNLW
Trigger: CCACAAGTTTGACAAGTTCAATATGAACATCAGTGGTGTTTTCCATCCAAATGGACTGGAGGTGATCATTAATACTGAGATTTGGGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 72 bp CCTCTGCCAGACGCTGCCTGCCCACTTCATACAGCCTaGATACTGTGTCCATGTTCAGGGCATCCATGCTGC +
Preference number: 6 (lower is better)
Translates to: PLPDAACPLHTA*ILCPCSGHPCC
Trigger: GCAGCATGGATGCCCTGAACATGGACACAGTATGCAGGCTGTATGAAGTGGGCAGGCAGCGTCTGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 72 bp GTCAGTGTCCCCCAGGATCAGTTCCACCTCCTCATCTaGATCAGAGTCTTCATCCTCCCCGTCCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: VSVPQDQFHLLI*IRVFILPVLSL
Trigger: GAGGGAGAGGACGGGGAGGATGAAGACTCTGATGCAGATGAGGAGGTGGAACTGATCCTGGGGGACACTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 72 bp TGGCAGCTGCTGAAAAGGGGCAGTTTACTGATGATCTaGCGGACAGTGCTACTGCGAGACAGGCCCACTAGG +
Preference number: 6 (lower is better)
Translates to: WQLLKRGSLLMI*RTVLLRDRPTR
Trigger: CCTAGTGGGCCTGTCTCGCAGTAGCACTGTCCGGCAGATCATCAGTAAACTGCCCCTTTTCAGCAGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 72 bp CTGCGCTTGTCCTGCAGCACAGGCTCCTTCATCAGCTaGTGGATCTGGCAGCTGCTGAAAAGGGGCAGTTTA +
Preference number: 6 (lower is better)
Translates to: LRLSCSTGSFIS*WIWQLLKRGSL
Trigger: TAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCCTGTGCTGCAGGACAAGCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp AGGCCCACTAGGGCTTTGCAGGCCAGGGCCCGGATTTaGTCTGCATCTGTGATGGGCATCTTAATGGACAGT +
Preference number: 6 (lower is better)
Translates to: RPTRALQARARI*SASVMGILMDS
Trigger: ACTGTCCATTAAGATGCCCATCACAGATGCAGACCAAATCCGGGCCCTGGCCTGCAAAGCCCTAGTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp TGTAGGCACCATGGTCCGACTTCTGCCGCAACACTCTaGTTTTCCTGCCATTGCAGGGTGATGGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: CRHHGPTSAATL*FSCHCRVMASL
Trigger: GAGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGGTGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp TCAGGAACCGCTCCCGTGCTGAGAATGCACAGCAGGTaGAGCCACTCTCATCTTCATTGGCTTCCCGGAACA +
Preference number: 6 (lower is better)
Translates to: SGTAPVLRMHSR*SHSHLHWLPGT
Trigger: TGTTCCGGGAAGCCAATGAAGATGAGAGTGGCTTCACCTGCTGTGCATTCTCAGCACGGGAGCGGTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp AGGGGTTCAGAAGAGAGCTTCCGTGGACTGGGACGCTaGTTTTCCTGCCGCAAAGCCACTTCCTGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: RGSEESFRGLGR*FSCRKATSCSC
Trigger: ACAGCTACAGGAAGTGGCTTTGCGGCAGGAAAACAAGCGTCCCAGTCCACGGAAGCTCTCTTCTGAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp GGACCCATCCCTGGAAGGTTCAAGATGTGTGATGGCTaGGTTGTGACAGTTATAGCTGGCCTCCTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: GPIPGRFKMCDG*VVTVIAGLLLS
Trigger: GGACAGGAGGAGGCCAGCTATAACTGTCACAACTCAGCCATCACACATCTTGAACCTTCCAGGGATGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 72 bp TACTTGCAGAACTTGACATGGTCACTGCGCTTGTCCTaGAGCACAGGCTCCTTCATCAGCTGCTGGATCTGG +
Preference number: 6 (lower is better)
Translates to: YLQNLTWSLRLS*STGSFISCWIW
Trigger: CCAGATCCAGCAGCTGATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp TCCTGCAGCACAGGCTCCTTCATCAGCTGCTGGATCTaGCAGCTGCTGAAAAGGGGCAGTTTACTGATGATC +
Preference number: 6 (lower is better)
Translates to: SCSTGSFISCWI*QLLKRGSLLMI
Trigger: GATCATCAGTAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGATGAAGGAGCCTGTGCTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp CCATGTTCCTTTTCCCACTGCTCCAGCAGGGTAGTGAGCTCAGCTTaGGAGTCCACATGTACCACTACTGTAGTCATGGCTTTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: PCSFSHCSSRVVSSA*ESTCTTTVVMALPS
Trigger: GGACGGCAAAGCCATGACTACAGTAGTGGTACATGTGGACTCCAAAGCTGAGCTCACTACCCTGCTGGAGCAGTGGGAAAAGGAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423656.5
ENST00000504652.5
CDS GCA 72 bp ATCAGAGGGAGAGAAGTCATTGTCCCCATCTTCCCCTaGGTTCTCATTATTGTCGTCCTCCTCCAACTCCGC +
Preference number: 6 (lower is better)
Translates to: IRGREVIVPIFP*VLIIVVLLQLR
Trigger: GCGGAGTTGGAGGAGGACGACAATAATGAGAACGCAGGGGAAGATGGGGACAATGACTTCTCTCCCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp ACCCGTTCAATGAGTTCAGCAGCATACTTGCAGAACTaGACATGGTCACTGCGCTTGTCCTGCAGCACAGGC +
Preference number: 6 (lower is better)
Translates to: TRSMSSAAYLQN*TWSLRLSCSTG
Trigger: GCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACTCATTGAACGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp CCATGTTCCTTTTCCCACTGCTCCAGCAGGGTAGTGAGCTCAGCTTaGGAGTCCACATGTACCACTACTGTAGTCATGGCTTTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: PCSFSHCSSRVVSSA*ESTCTTTVVMALPV
Trigger: CACAGGCAAAGCCATGACTACAGTAGTGGTACATGTGGACTCCAAAGCTGAGCTCACTACCCTGCTGGAGCAGTGGGAAAAGGAACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684031.1
CDS CAA 90 bp TTTCCTGACACCCGTTCAATGAGTTCAGCAGCATACTTGCAGAACTaGACATGGTCACTGCGCTTGTCCTGCAGCACAGGCTCCTTCATC +
Preference number: 6 (lower is better)
Translates to: FPDTRSMSSAAYLQN*TWSLRLSCSTGSFI
Trigger: GATGAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACTCATTGAACGGGTGTCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp AGAAGTGGTTTTCCTGACACCCGTTCAATGAGTTCAGCAGCATACTaGCAGAACTTGACATGGTCACTGCGCTTGTCCTGCAGCACAGGC +
Preference number: 6 (lower is better)
Translates to: RSGFPDTRSMSSAAY*QNLTWSLRLSCSTG
Trigger: GCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACTCATTGAACGGGTGTCAGGAAAACCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp TCCTCTAGAAGGTTTGCTAGCTCCTCATCAGAGGGAGAGAAGTCATaGTCCCCATCTTCCCCTGCGTTCTCATTATTGTCGTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSRRFASSSSEGEKS*SPSSPAFSLLSSSS
Trigger: GGAGGAGGACGACAATAATGAGAACGCAGGGGAAGATGGGGACAATGACTTCTCTCCCTCTGATGAGGAGCTAGCAAACCTTCTAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp TCAATGAGTTCAGCAGCATACTTGCAGAACTTGACATaGTCACTGCGCTTGTCCTGCAGCACAGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SMSSAAYLQNLT*SLRLSCSTGSF
Trigger: GAAGGAGCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACTCATTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp CCAGCCTCATCCAACACGTCCACTGATTCTGCCAACTaGAGCTGGATTTTTGGCACCACAGTAAGAATAGCC +
Preference number: 6 (lower is better)
Translates to: PASSNTSTDSAN*SWIFGTTVRIA
Trigger: GGCTATTCTTACTGTGGTGCCAAAAATCCAGCTCCAGTTGGCAGAATCAGTGGACGTGTTGGATGAGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp TTTTCCCACTGCTCCAGCAGGGTAGTGAGCTCAGCTTaGGAGTCCACATGTACCACTACTGTAGTCATGGCT +
Preference number: 6 (lower is better)
Translates to: FSHCSSRVVSSA*ESTCTTTVVMA
Trigger: AGCCATGACTACAGTAGTGGTACATGTGGACTCCAAAGCTGAGCTCACTACCCTGCTGGAGCAGTGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp GCACCATGGTCCGACTTCTGCCGCAACACTCTGATTTTCCTGCCATaGCAGGGTGATGGCCTCTCTCTGATAAAACTGATTCTACCAATC +
Preference number: 6 (lower is better)
Translates to: APWSDFCRNTLIFLP*QGDGLSLIKLILPI
Trigger: GATTGGTAGAATCAGTTTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp GGAGAAAGGTGGGCAGGTGGCAACTGGATTCTTGCAGCGAGCATGTaGTTCTCTAAGATACTCTGTGATTATACTGTCCAGCGTAGGTGG +
Preference number: 6 (lower is better)
Translates to: GERWAGGNWILAASM*FSKILCDYTVQRRW
Trigger: CCACCTACGCTGGACAGTATAATCACAGAGTATCTTAGAGAACAACATGCTCGCTGCAAGAATCCAGTTGCCACCTGCCCACCTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp ATCTTGGCCAGGGTGTGCTCACTGCTTTTAGGGTTCTaGGGCAGCTTTCTCCGAGGAGTACCAGAGATAAAT +
Preference number: 6 (lower is better)
Translates to: ILARVCSLLLGF*GSFLRGVPEIN
Trigger: ATTTATCTCTGGTACTCCTCGGAGAAAGCTGCCTCAGAACCCTAAAAGCAGTGAGCACACCCTGGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp GAAGAGTATTCTCAGCAAGTGGCCCAGCATACACTCTaGATCAGCTCGACCAGGATGTCGATCATCAAATGG +
Preference number: 6 (lower is better)
Translates to: EEYSQQVAQHTL*ISSTRMSIIKW
Trigger: CCATTTGATGATCGACATCCTGGTCGAGCTGATCCAGAGTGTATGCTGGGCCACTTGCTGAGAATACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp AATACTGACTTCATTCCCCAAAGTGCAGACAAAGGCTaGCTCCAAGTAGCAGATGTCAGCAGCAAGGACCCA +
Preference number: 6 (lower is better)
Translates to: NTDFIPQSADKG*LQVADVSSKDP
Trigger: TGGGTCCTTGCTGCTGACATCTGCTACTTGGAGCCAGCCTTTGTCTGCACTTTGGGGAATGAAGTCAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp ACACCACTGATGTTCATATTGAACTTGTCAAACTTGTaGATGGCCTGTGCAGAGCGGACATCCCAGAGGACG +
Preference number: 6 (lower is better)
Translates to: TPLMFILNLSNL*MACAERTSQRT
Trigger: CGTCCTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAATATGAACATCAGTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp TTTCCTGACACCCGTTCAATGAGTTCAGCAGCATACTaGCAGAACTTGACATGGTCACTGCGCTTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: FPDTRSMSSAAY*QNLTWSLRLSC
Trigger: GCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGAACTCATTGAACGGGTGTCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp AGGTTTGCTAGCTCCTCATCAGAGGGAGAGAAGTCATaGTCCCCATCTTCCCCTGCGTTCTCATTATTGTCG +
Preference number: 6 (lower is better)
Translates to: RFASSSSEGEKS*SPSSPAFSLLS
Trigger: CGACAATAATGAGAACGCAGGGGAAGATGGGGACAATGACTTCTCTCCCTCTGATGAGGAGCTAGCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp CCTCCTAACAGTCCAGTAGAATATGTCCTCAATGGTTaGTCGGCCTCTCGGGCCCATTTGAAAAGATTCTCG +
Preference number: 6 (lower is better)
Translates to: PPNSPVEYVLNG*SASRAHLKRFS
Trigger: CGAGAATCTTTTCAAATGGGCCCGAGAGGCCGATCAACCATTGAGGACATATTCTACTGGACTGTTAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp CTCTGGATCAGCTCGACCAGGATGTCGATCATCAAATaGGTCTGGATCCCCTTTACGATACTCTTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: LWISSTRMSIIK*VWIPFTILFSF
Trigger: GAAACTGAAGAGTATCGTAAAGGGGATCCAGACCCATTTGATGATCGACATCCTGGTCGAGCTGATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp GGTGGCACAGTTCCTCTTGTAGTTGTTGGCAAGATCTaGGTTAAACAGAGTCAACAGCTTGTTGCCAGTCTG +
Preference number: 6 (lower is better)
Translates to: GGTVPLVVVGKI*VKQSQQLVASL
Trigger: CAGACTGGCAACAAGCTGTTGACTCTGTTTAACCCAGATCTTGCCAACAACTACAAGAGGAACTGTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp TCCGACTTCTGCCGCAACACTCTGATTTTCCTGCCATaGCAGGGTGATGGCCTCTCTCTGATAAAACTGATT +
Preference number: 6 (lower is better)
Translates to: SDFCRNTLIFLP*QGDGLSLIKLI
Trigger: AATCAGTTTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGAAGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp ATGAAAGGAGATCTCCATGTCTCCAGAAGCTTCCTCTaGGTCTCCATCCACTACATCTACAGCCATGTCACC +
Preference number: 6 (lower is better)
Translates to: MKGDLHVSRSFL*VSIHYIYSHVT
Trigger: GGTGACATGGCTGTAGATGTAGTGGATGGAGACCAAGAGGAAGCTTCTGGAGACATGGAGATCTCCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp TTTGGATGGAAAACACCACTGATGTTCATATTGAACTTGTCAAACTaGTGGATGGCCTGTGCAGAGCGGACATCCCAGAGGACGCCATCA +
Preference number: 6 (lower is better)
Translates to: FGWKTPLMFILNLSN*WMACAERTSQRTPS
Trigger: TGATGGCGTCCTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAATATGAACATCAGTGGTGTTTTCCATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp TCCAGTCCATTTGGATGGAAAACACCACTGATGTTCATATTGAACTaGTCAAACTTGTGGATGGCCTGTGCAGAGCGGACATCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SSPFGWKTPLMFILN*SNLWMACAERTSQR
Trigger: CCTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAATATGAACATCAGTGGTGTTTTCCATCCAAATGGACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp AGCCTCAAAGTATTTGCGCAAGGCCATGCAGGTATGTTTCCCAGTTaGGCGGCTAGCAAATATTTCATCATCACTCAGAAGTGCACCCTG +
Preference number: 6 (lower is better)
Translates to: SLKVFAQGHAGMFPS*AASKYFIITQKCTL
Trigger: CAGGGTGCACTTCTGAGTGATGATGAAATATTTGCTAGCCGCCAAACTGGGAAACATACCTGCATGGCCTTGCGCAAATACTTTGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp CTGCCGCAACACTCTGATTTTCCTGCCATTGCAGGGTaGTGGCCTCTCTCTGATAAAACTGATTCTACCAAT +
Preference number: 6 (lower is better)
Translates to: LPQHSDFPAIAG*WPLSDKTDSTN
Trigger: ATTGGTAGAATCAGTTTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp GAAGCCACTCTCATCTTCATTGGCTTCCCGGAACACTaGAATAGGACGGAATCTGCTAAAGATAAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: EATLIFIGFPEH*NRTESAKDKVP
Trigger: AGGCACCTTATCTTTAGCAGATTCCGTCCTATTTCAGTGTTCCGGGAAGCCAATGAAGATGAGAGTGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp TGGGCAGGTGGCAACTGGATTCTTGCAGCGAGCATGTaGTTCTCTAAGATACTCTGTGATTATACTGTCCAG +
Preference number: 6 (lower is better)
Translates to: WAGGNWILAASM*FSKILCDYTVQ
Trigger: CTGGACAGTATAATCACAGAGTATCTTAGAGAACAACATGCTCGCTGCAAGAATCCAGTTGCCACCTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp AAAACACCACTGATGTTCATATTGAACTTGTCAAACTaGTGGATGGCCTGTGCAGAGCGGACATCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: KTPLMFILNLSN*WMACAERTSQR
Trigger: CCTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAATATGAACATCAGTGGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp TTCACTCTGCTACTAGTCTTGTGGCCTGAATCAAGATaGAAGGAGATCTCCATGTCTCCAGAAGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: FTLLLVLWPESR*KEISMSPEASS
Trigger: AGAGGAAGCTTCTGGAGACATGGAGATCTCCTTTCATCTTGATTCAGGCCACAAGACTAGTAGCAGAGTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp GGTATAATTGGTGCCAATCACCCAGGGAGACATTTCTaGCCAACTGCTATTAGACAGCTCAACAAACATGCG +
Preference number: 6 (lower is better)
Translates to: GIIGANHPGRHF*PTAIRQLNKHA
Trigger: CGCATGTTTGTTGAGCTGTCTAATAGCAGTTGGTCAGAAATGTCTCCCTGGGTGATTGGCACCAATTATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp GTATTTGCGCAAGGCCATGCAGGTATGTTTCCCAGTTaGGCGGCTAGCAAATATTTCATCATCACTCAGAAG +
Preference number: 6 (lower is better)
Translates to: VFAQGHAGMFPS*AASKYFIITQK
Trigger: CTTCTGAGTGATGATGAAATATTTGCTAGCCGCCAAACTGGGAAACATACCTGCATGGCCTTGCGCAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp ATCAGCTCGACCAGGATGTCGATCATCAAATGGGTCTaGATCCCCTTTACGATACTCTTCAGTTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: ISSTRMSIIKWV*IPFTILFSFFF
Trigger: GAAAAAGAAACTGAAGAGTATCGTAAAGGGGATCCAGACCCATTTGATGATCGACATCCTGGTCGAGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp TATTTGCGCAAGGCCATGCAGGTATGTTTCCCAGTTTaGCGGCTAGCAAATATTTCATCATCACTCAGAAGT +
Preference number: 6 (lower is better)
Translates to: YLRKAMQVCFPV*RLANISSSLRS
Trigger: ACTTCTGAGTGATGATGAAATATTTGCTAGCCGCCAAACTGGGAAACATACCTGCATGGCCTTGCGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp TTTGGATGGAAAACACCACTGATGTTCATATTGAACTaGTCAAACTTGTGGATGGCCTGTGCAGAGCGGACA +
Preference number: 6 (lower is better)
Translates to: FGWKTPLMFILN*SNLWMACAERT
Trigger: TGTCCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAATATGAACATCAGTGGTGTTTTCCATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp TGTACTCCACCATGCGCAACAAATTCTGTGGCAAATTaGTTATGGAGCAGGAGAGATGCTAGGTGCTTTAGT +
Preference number: 6 (lower is better)
Translates to: CTPPCATNSVAN*LWSRRDARCFS
Trigger: ACTAAAGCACCTAGCATCTCTCCTGCTCCATAACAAATTTGCCACAGAATTTGTTGCGCATGGTGGAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp ACAAACATGCGATCTGGATCAGAAGATGAGAAACCCAACTTTTGCTaGGCTTTCCTAAAGTTCTCTCTGTCACCCTGTTTTGCTGACTTG +
Preference number: 6 (lower is better)
Translates to: TNMRSGSEDEKPNFC*AFLKFSLSPCFADL
Trigger: CAAGTCAGCAAAACAGGGTGACAGAGAGAACTTTAGGAAAGCCAAGCAAAAGTTGGGTTTCTCATCTTCTGATCCAGATCGCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp GTGATCTTCTGTGAAGGAATGCTTCATATCAAATACTaGCTTCATTCCCCAAAGTGCAGACAAAGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VIFCEGMLHIKY*LHSPKCRQRLA
Trigger: AGCCAGCCTTTGTCTGCACTTTGGGGAATGAAGTCAGTATTTGATATGAAGCATTCCTTCACAGAAGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp TATAGAACATCATCAGCTCCCGTGATCCAAGTTGCATaGATATGGGAAGTAGCTCCTGATATTCTCCTAGAG +
Preference number: 6 (lower is better)
Translates to: YRTSSAPVIQVA*IWEVAPDILLE
Trigger: CTCTAGGAGAATATCAGGAGCTACTTCCCATATTCATGCAACTTGGATCACGGGAGCTGATGATGTTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp CGATCTGGATCAGAAGATGAGAAACCCAACTTTTGCTaGGCTTTCCTAAAGTTCTCTCTGTCACCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: RSGSEDEKPNFC*AFLKFSLSPCF
Trigger: AAAACAGGGTGACAGAGAGAACTTTAGGAAAGCCAAGCAAAAGTTGGGTTTCTCATCTTCTGATCCAGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 90 bp GTCATCACATATGCATTCACCAGTGCATTCATGAAATCATCATTCTaGAAGAGTATTCTCAGCAAGTGGCCCAGCATACACTCTGGATCA +
Preference number: 6 (lower is better)
Translates to: VITYAFTSAFMKSSF*KSILSKWPSIHSGS
Trigger: TGATCCAGAGTGTATGCTGGGCCACTTGCTGAGAATACTCTTCAAGAATGATGATTTCATGAATGCACTGGTGAATGCATATGTGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000684031.1
CDS CAA 90 bp AGTAATTTCTGTACTCCACCATGCGCAACAAATTCTGTGGCAAATTaGTTATGGAGCAGGAGAGATGCTAGGTGCTTTAGTGCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: SNFCTPPCATNSVAN*LWSRRDARCFSASN
Trigger: ATTTGAGGCACTAAAGCACCTAGCATCTCTCCTGCTCCATAACAAATTTGCCACAGAATTTGTTGCGCATGGTGGAGTACAGAAATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS TCA 72 bp AGACAGCTCAACAAACATGCGATCTGGATCAGAAGATaGGAAACCCAACTTTTGCTTGGCTTTCCTAAAGTT +
Preference number: 6 (lower is better)
Translates to: RQLNKHAIWIRR*ETQLLLGFPKV
Trigger: AACTTTAGGAAAGCCAAGCAAAAGTTGGGTTTCTCATCTTCTGATCCAGATCGCATGTTTGTTGAGCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp CCAATTGCAGGCAATAGAAATAAGCTGCAACAAGAGTaGCACACAAGAAAGTTTGAGGAAAACTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: PIAGNRNKLQQE*HTRKFEENFSW
Trigger: CCAGCTGAAGTTTTCCTCAAACTTTCTTGTGTGCAACTCTTGTTGCAGCTTATTTCTATTGCCTGCAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CAA 72 bp TTGGAGTCCACATGTACCACTACTGTAGTCATGGCTTaGCCTGTGAAGTCTTGGTTATTTAACTTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: LESTCTTTVVMA*PVKSWLFNFSK
Trigger: TTTGGAGAAGTTAAATAACCAAGACTTCACAGGCAAAGCCATGACTACAGTAGTGGTACATGTGGACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684031.1
CDS CAA 90 bp ATAGGTCTTCCAATTGCAGGCAATAGAAATAAGCTGCAACAAGAGTaGCACACAAGAAAGTTTGAGGAAAACTTCAGCTGGTTCCCAATA +
Preference number: 6 (lower is better)
Translates to: IGLPIAGNRNKLQQE*HTRKFEENFSWFPI
Trigger: TATTGGGAACCAGCTGAAGTTTTCCTCAAACTTTCTTGTGTGCAACTCTTGTTGCAGCTTATTTCTATTGCCTGCAATTGGAAGACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 72 bp AGTTTGAGGAAAACTTCAGCTGGTTCCCAATATAGCTaGGCTGGGCCATATTCTATCAAAAATTCCATCATT +
Preference number: 6 (lower is better)
Translates to: SLRKTSAGSQYS*AGPYSIKNSII
Trigger: AATGATGGAATTTTTGATAGAATATGGCCCAGCGCAGCTATATTGGGAACCAGCTGAAGTTTTCCTCAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS GCA 72 bp CAATTGCAGGCAATAGAAATAAGCTGCAACAAGAGTTaGACACAAGAAAGTTTGAGGAAAACTTCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: QLQAIEISCNKS*TQESLRKTSAG
Trigger: ACCAGCTGAAGTTTTCCTCAAACTTTCTTGTGTGCAACTCTTGTTGCAGCTTATTTCTATTGCCTGCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1
CDS CCA 72 bp ATCTCAGTATTAATGATCACCTCCAGTCCATTTGGATaGAAAACACCACTGATGTTCATATTGAACTTGTCA +
Preference number: 6 (lower is better)
Translates to: ISVLMITSSPFG*KTPLMFILNLS
Trigger: TGACAAGTTCAATATGAACATCAGTGGTGTTTTCCATCCAAATGGACTGGAGGTGATCATTAATACTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335891.5
ENST00000423656.5
ENST00000504652.5
ENST00000684031.1