Pregenerated sensors for DBX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000185610Ensembl transcript IDs: ENST00000332700.6
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCGAGCCAGCTGTTGCTCTCCTTCTTTTCAGTTCTGTCATACTTaGTGGGAGATTCTATTCCACTTACAAATTAAGCCTGAGTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: DRASCCSPSFQFCHT*WEILFHLQIKPESR Trigger: CCTAGACTCAGGCTTAATTTGTAAGTGGAATAGAATCTCCCAGCAAGTATGACAGAACTGAAAAGAAGGAGAGCAACAGCTGGCTCGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR TCA 90 bp | TACTTGACTCAAATATCTCTGGGTGGGCCATACCCTCTATTTACCTaGCAGGCTCTTAAAGGCATTTTATTTTGCAAACCCTGGTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: YLTQISLGGPYPLFT*QALKGILFCKPWSR Trigger: CCTAGACCAGGGTTTGCAAAATAAAATGCCTTTAAGAGCCTGTCAGGTAAATAGAGGGTATGGCCCACCCAGAGATATTTGAGTCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATTGGGTCTCTCCCTCATaGTGGCCCGATGGTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SWSKNFWINSANRYQKCNWVSPS*WPDGPE Trigger: CTCTGGACCATCGGGCCATCATGAGGGAGAGACCCA...ATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGAGACCGAGCCAGCTGTTaGTCTCCTTCTTTTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: KGILFCKPWSRPIFTEKRDRASC*SPSFQF Trigger: GAACTGAAAAGAAGGAGAGCAACAGCTGGCTCGGTC...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGACTCATGATGGCCCGATaGTCCAGAGACTTGGAGATT | + |
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Preference number: 2 (lower is better) Translates to: KGILFCKPWSRPIFTEKRLMMAR*SRDLEI Trigger: AATCTCCAAGTCTCTGGACCATCGGGCCATCATGAG...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAGTCTTAGCCAGAGGTCACAAACTTCTTGGCATAGACATTTTGTTTGGCTCAAATATCTCTGGGTaGGCCATACCCTCTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: SLVLARGHKLLGIDILFGSNISG*AIPSIY Trigger: GTAAATAGAGGGTATGGCCCACCCAGAGATATTTGA...GCCAAACAAAATGTCTATGCCAAGAAGTTTGTGACCTCTGGCTAAGACTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGACATGTTTTTGGGGTATaGAAGTTTGCACTAAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: KGILFCKPWSRPIFTEKRHVFGV*KFALKS Trigger: GGACTTTAGTGCAAACTTTCATACCCCAAAAACATG...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR TCA 90 bp | TGTATATACACACACATAGAGACAAACACATATATACACATACTCAGAGCAGGGAAGCGTTCTTTTAAATaGACACGGAGGAATGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CIYTHIETNTYIHILRAGKRSFK*TRRNAS Trigger: GGAAGCATTCCTCCGTGTTCATTTAAAAGAACGCTT...CCCTGCTCTGAGTATGTGTATATATGTGTTTGTCTCTATGTGTGTGTATATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATCAGTTCTGTCATACTTaGTGGGAGATTCTATTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SWSKNFWINSANRYQKCNQFCHT*WEILFH Trigger: GTGGAATAGAATCTCCCAGCAAGTATGACAGAACTG...ATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATTTTGTTGAGGACTGCTaGGCTAAGGTGTTAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: SWSKNFWINSANRYQKCNFVEDC*AKVLKF Trigger: GAATTTTAACACCTTAGCTCAGCAGTCCTCAACAAA...ATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR CAA 90 bp | AAATATCTCTGGGTGGGCCATACCCTCTATTTACCTGACAGGCTCTTAAAGGCAGCAGTGGCTCATTTGTaGAGGACTGCTGAGCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: KYLWVGHTLYLPDRLLKAAVAHL*RTAELR Trigger: CCTTAGCTCAGCAGTCCTCAACAAATGAGCCACTGC...TGCCTTTAAGAGCCTGTCAGGTAAATAGAGGGTATGGCCCACCCAGAGATATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR TCA 72 bp | CAAATATCTCTGGGTGGGCCATACCCTCTATTTACCTaGCAGGCTCTTAAAGGCATTTTATTTTGCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: QISLGGPYPLFT*QALKGILFCKP Trigger: GGGTTTGCAAAATAAAATGCCTTTAAGAGCCTGTCAGGTAAATAGAGGGTATGGCCCACCCAGAGATATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGATCAGTTCTGTCATACTaGCTGGGAGATTCTATTCCA | + |
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Preference number: 3 (lower is better) Translates to: KGILFCKPWSRPIFTEKRSVLSY*LGDSIP Trigger: TGGAATAGAATCTCCCAGCAAGTATGACAGAACTGA...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| 3UTR-3UTR CAA 90 bp | ATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTAATGCGATGGTCCAGAGACTaGGAGATTAAGGATACTAAT | + |
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Preference number: 3 (lower is better) Translates to: IRSHHHYAAYSLTKCHLMRWSRD*EIKDTN Trigger: ATTAGTATCCTTAATCTCCAAGTCTCTGGACCATCG...CATTAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTACGCACCGGCGTGGGCTaGGACCGCGCTGGGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLRTGVG*DRAGEH Trigger: ATGCTCCCCAGCGCGGTCGCAGCCCACGCCGGTGCG...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTACAGTACGCACCGGCGTaGGCTGCGACCGCGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLQYAPA*AATALG Trigger: CCCCAGCGCGGTCGCAGCCCACGCCGGTGCGTACTG...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | AAATATCTCTGGGTGGGCCATACCCTCTATTTACCTGACAGGCTCTTAAAGGCAGCTGGCGCTGAAGGCTaGAAGGTACAGTCTCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KYLWVGHTLYLPDRLLKAAGAEG*KVQSRS Trigger: GGACCGAGACTGTACCTTCCAGCCTTCAGCGCCAGC...TGCCTTTAAGAGCCTGTCAGGTAAATAGAGGGTATGGCCCACCCAGAGATATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTAGCGCAGCGGGGAGGTTaGGGAGCGCGGAGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLAQRGG*GARRKP Trigger: TGGCTTCCTCCGCGCTCCTCAACCTCCCCGCTGCGC...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | CAAATTAAGCCTGAGTCTAGGGCCAAACAAGAGAACACTAGAGTGGGTTTCCTAGAGGGACTGAGCACTTaGAAAGCCCACCGCGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: QIKPESRAKQENTRVGFLEGLST*KAHRVP Trigger: CGGAACGCGGTGGGCTTTTCAAGTGCTCAGTCCCTC...TAGGAAACCCACTCTAGTGTTCTCTTGTTTGGCCCTAGACTCAGGCTTAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | TCTTTAGTCTTAGCCAGAGGTCACAAACTTCTTGGCATAGACATTTTGTTTGGCTGTCCGCAGAGGGACTaGGCACTTGAAAAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SLVLARGHKLLGIDILFGCPQRD*ALEKPT Trigger: GGTGGGCTTTTCAAGTGCTCAGTCCCTCTGCGGACA...GCCAAACAAAATGTCTATGCCAAGAAGTTTGTGACCTCTGGCTAAGACTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGAACCCAGAGCAGACCGTaGGAGGGGATCCTCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KGILFCKPWSRPIFTEKRTQSRP*EGILLK Trigger: CTTCAAGAGGATCCCCTCTCACGGTCTGCTCTGGGT...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | CCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATTAACTCTTGCCCAGGTTaGCAAAGCCGGGCGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PGVKTSGLTQQIVTRNAINSCPG*QSRAQR Trigger: CCGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTT...AATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | AAATATCTCTGGGTGGGCCATACCCTCTATTTACCTGACAGGCTCTTAAAGGCAGGACTTGAGTGCTGTTaGGGGACGTCCCATATTGAA | + |
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Preference number: 4 (lower is better) Translates to: KYLWVGHTLYLPDRLLKAGLECC*GTSHIE Trigger: TTCAATATGGGACGTCCCCCAACAGCACTCAAGTCC...TGCCTTTAAGAGCCTGTCAGGTAAATAGAGGGTATGGCCCACCCAGAGATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATGGAAGGTGCTGGCGCTaGAGGCTGGAAGGTACAGTC | + |
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Preference number: 4 (lower is better) Translates to: HVVKTQVDIPSPILFVQNGRCWR*RLEGTV Trigger: GACTGTACCTTCCAGCCTTCAGCGCCAGCACCTTCC...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTATGGGTCTCTCCCTCATaGTGGCCCGATGGTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLWVSPS*WPDGPE Trigger: CTCTGGACCATCGGGCCATCATGAGGGAGAGACCCA...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGACGATCAGGAAACTCTTaGCCAGGTTGCCAAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: KGILFCKPWSRPIFTEKRRSGNS*PGCQSR Trigger: CCGGCTTTGGCAACCTGGGCAAGAGTTTCCTGATCG...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | GCACTGATGAGGTACAAGCTAGCTGGCATTAGAGTCCAGATGTTACTATTAAGCTCAGAAGGAAAGGTTTaGAAGGTGCTGGCGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ALMRYKLAGIRVQMLLLSSEGKV*KVLALK Trigger: CTTCAGCGCCAGCACCTTCCAAACCTTTCCTTCTGA...GCTTAATAGTAACATCTGGACTCTAATGCCAGCTAGCTTGTACCTCATCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATCCTCCATCTTGGACTTaGGTGCTGTTGGGGGACGTC | + |
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Preference number: 4 (lower is better) Translates to: HVVKTQVDIPSPILFVQNPPSWT*VLLGDV Trigger: GACGTCCCCCAACAGCACTCAAGTCCAAGATGGAGG...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | CAAATTAAGCCTGAGTCTAGGGCCAAACAAGAGAACACTAGAGTGGGTTTCCTACAGCTCTTCTTAAAATaGCCCTCCGAGCTTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QIKPESRAKQENTRVGFLQLFLK*PSELWN Trigger: ATTCCAAAGCTCGGAGGGGCATTTTAAGAAGAGCTG...TAGGAAACCCACTCTAGTGTTCTCTTGTTTGGCCCTAGACTCAGGCTTAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | AAATATCTCTGGGTGGGCCATACCCTCTATTTACCTGACAGGCTCTTAAAGGCACAGTTCTGTCATACTTaGTGGGAGATTCTATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: KYLWVGHTLYLPDRLLKAQFCHT*WEILFH Trigger: GTGGAATAGAATCTCCCAGCAAGTATGACAGAACTG...TGCCTTTAAGAGCCTGTCAGGTAAATAGAGGGTATGGCCCACCCAGAGATATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | TCCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATGGGGACGTCCCATATTaGAGGACATGGAGAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SWSKNFWINSANRYQKCNGDVPY*RTWRRE Trigger: TTCCCTTCTCCATGTCCTTCAATATGGGACGTCCCC...ATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATCATCTTGGACTTGAGTaGTGTTGGGGGACGTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: HVVKTQVDIPSPILFVQNHLGLE*CWGTSH Trigger: ATGGGACGTCCCCCAACAGCACTCAAGTCCAAGATG...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | GCTGGCATTAGAGTCCAGATGTTACTATTAAGCGTTCTTTTAAATGAACACGGAATGAACACGGAGGAATaGTTCCATTCAGACAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AGIRVQMLLLSVLLNEHGMNTEE*FHSDSP Trigger: GGGGCTGTCTGAATGGAAGCATTCCTCCGTGTTCAT...TCCGTGTTCATTTAAAAGAACGCTTAATAGTAACATCTGGACTCTAATGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | TCTTTAGTCTTAGCCAGAGGTCACAAACTTCTTGGCATAGACATTTTGTTTGGCCCTTTAGTCCCAAGTTaGTGGCAAGTTTCTTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: SLVLARGHKLLGIDILFGPLVPS*WQVSFG Trigger: ACCGAAAGAAACTTGCCATCAACTTGGGACTAAAGG...GCCAAACAAAATGTCTATGCCAAGAAGTTTGTGACCTCTGGCTAAGACTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | GCACTGATGAGGTACAAGCTAGCTGGCATTAGAGTCCAGATGTTACTATTAAGCAAATATAAGGCACCTTaGAGTGAATTTGCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALMRYKLAGIRVQMLLLSKYKAP*SEFASG Trigger: CCCAGAAGCAAATTCACTGCAAGGTGCCTTATATTT...GCTTAATAGTAACATCTGGACTCTAATGCCAGCTAGCTTGTACCTCATCAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTAGACCGAGCCAGCTGTTaGTCTCCTTCTTTTCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLDRASC*SPSFQF Trigger: GAACTGAAAAGAAGGAGAGCAACAGCTGGCTCGGTC...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | GCTGGCATTAGAGTCCAGATGTTACTATTAAGCGTTCTTTTAAATGAACACGGATCCAGAGCCTTTCTCTaGTCCTCAGAAAAGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: AGIRVQMLLLSVLLNEHGSRAFL*SSEKTA Trigger: AGCTGTCTTTTCTGAGGACCAGAGAAAGGCTCTGGA...TCCGTGTTCATTTAAAAGAACGCTTAATAGTAACATCTGGACTCTAATGCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATCTCATGATGGCCCGATaGTCCAGAGACTTGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: HVVKTQVDIPSPILFVQNLMMAR*SRDLEI Trigger: AATCTCCAAGTCTCTGGACCATCGGGCCATCATGAG...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | GCACTGATGAGGTACAAGCTAGCTGGCATTAGAGTCCAGATGTTACTATTAAGCTGTATGCCACCTAAGTaGAAAATTGAGTCCCTAACT | + |
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Preference number: 4 (lower is better) Translates to: ALMRYKLAGIRVQMLLLSCMPPK*KIESLT Trigger: AGTTAGGGACTCAATTTTCCACTTAGGTGGCATACA...GCTTAATAGTAACATCTGGACTCTAATGCCAGCTAGCTTGTACCTCATCAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR GCA 90 bp | GCACTGATGAGGTACAAGCTAGCTGGCATTAGAGTCCAGATGTTACTATTAAGCAAGCCACCATCATTATaGAGCTTACTCACTAACAAA | + |
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Preference number: 4 (lower is better) Translates to: ALMRYKLAGIRVQMLLLSKPPSL*SLLTNK Trigger: TTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTT...GCTTAATAGTAACATCTGGACTCTAATGCCAGCTAGCTTGTACCTCATCAGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATCATGCTCTCTTCTCTTaGAAAAGCAGTGGAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: HVVKTQVDIPSPILFVQNHALFS*KSSGGC Trigger: GCATCCTCCACTGCTTTTCCAAGAGAAGAGAGCATG...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTAGCCCCTGAACTCTCCTaGATTAGTCTTTCTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLAPELS*ISLSEG Trigger: ACCTTCAGAAAGACTAATCCAGGAGAGTTCAGGGGC...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | TCTTTAGTCTTAGCCAGAGGTCACAAACTTCTTGGCATAGACATTTTGTTTGGCCATGTTTTTGGGGTATaGAAGTTTGCACTAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLVLARGHKLLGIDILFGHVFGV*KFALKS Trigger: GGACTTTAGTGCAAACTTTCATACCCCAAAAACATG...GCCAAACAAAATGTCTATGCCAAGAAGTTTGTGACCTCTGGCTAAGACTAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | TCTTTAGTCTTAGCCAGAGGTCACAAACTTCTTGGCATAGACATTTTGTTTGGCTTTGTTGAGGACTGCTaGGCTAAGGTGTTAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: SLVLARGHKLLGIDILFGFVEDC*AKVLKF Trigger: GAATTTTAACACCTTAGCTCAGCAGTCCTCAACAAA...GCCAAACAAAATGTCTATGCCAAGAAGTTTGTGACCTCTGGCTAAGACTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | CAAATTAAGCCTGAGTCTAGGGCCAAACAAGAGAACACTAGAGTGGGTTTCCTAAAATTCACTTACAGCTaGATACCAAAAGAAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QIKPESRAKQENTRVGFLKFTYS*IPKEVR Trigger: TCTGACTTCTTTTGGTATCCAGCTGTAAGTGAATTT...TAGGAAACCCACTCTAGTGTTCTCTTGTTTGGCCCTAGACTCAGGCTTAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | CCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATTAAGCGTTCTTTTAAATaGACACGGAGGAATGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PGVKTSGLTQQIVTRNAIKRSFK*TRRNAS Trigger: GGAAGCATTCCTCCGTGTTCATTTAAAAGAACGCTT...AATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR TCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTAGGTAAAGACACAGGTTaGCATACCAAGTCCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLGKDTG*HTKSNS Trigger: AGAATTGGACTTGGTATGTCAACCTGTGTCTTTACC...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTACTTGGATACACCTGTTaGAAAGCACTTCCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLLGYTC*KALPFL Trigger: AAGAAAAGGAAGTGCTTTCCAACAGGTGTATCCAAG...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTATTATTTTGCAAACCCTaGTCTAGGCCCATCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLLFCKP*SRPIFT Trigger: TGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAA...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | TCCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATGATGGTCCAGAGACTTaGAGATTAAGGATACTAATA | + |
|
Preference number: 4 (lower is better) Translates to: SWSKNFWINSANRYQKCNDGPET*RLRILI Trigger: TATTAGTATCCTTAATCTCCAAGTCTCTGGACCATC...ATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | TGTATATACACACACATAGAGACAAACACATATATACACATACTCAGAGCAGGGAGGTCACAAACTTCTTaGCATAGACATTTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CIYTHIETNTYIHILRAGRSQTS*HRHFVW Trigger: CCAAACAAAATGTCTATGCCAAGAAGTTTGTGACCT...CCCTGCTCTGAGTATGTGTATATATGTGTTTGTCTCTATGTGTGTGTATATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CCA 90 bp | TGTATATACACACACATAGAGACAAACACATATATACACATACTCAGAGCAGGGTGGAGTAAAAACTTCTaGATTAACTCAGCAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: CIYTHIETNTYIHILRAGWSKNF*INSANR Trigger: ACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCA...CCCTGCTCTGAGTATGTGTATATATGTGTTTGTCTCTATGTGTGTGTATATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 90 bp | GCTGCGACCGCGCTGGGGAGCATAGTGCGGCGCCAACCGGTCTGCTaGGCGCCCGCCTTGCGCCCGCCTGTCGCCCGGGCGCCCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AATALGSIVRRQPVC*APALRPPVARAPRT Trigger: GGTGCGGGGCGCCCGGGCGACAGGCGGGCGCAAGGCGGGCGCGCAGCAGACCGGTTGGCGCCGCACTATGCTCCCCAGCGCGGTCGCAGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
||
| CDS GCA 90 bp | TGGGCTGCGACCGCGCTGGGGAGCATAGTGCGGCGCCAACCGGTCTaGTGCGCGCCCGCCTTGCGCCCGCCTGTCGCCCGGGCGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WAATALGSIVRRQPV*CAPALRPPVARAPR Trigger: GCGGGGCGCCCGGGCGACAGGCGGGCGCAAGGCGGGCGCGCAGCAGACCGGTTGGCGCCGCACTATGCTCCCCAGCGCGGTCGCAGCCCA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 90 bp | GAGCGCGGAGGAAGCCACAACGTCCCAGTACGCACCGGCGTGGGCTaGGACCGCGCTGGGGAGCATAGTGCGGCGCCAACCGGTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ERGGSHNVPVRTGVG*DRAGEHSAAPTGLL Trigger: CAGCAGACCGGTTGGCGCCGCACTATGCTCCCCAGCGCGGTCGCAGCCCACGCCGGTGCGTACTGGGACGTTGTGGCTTCCTCCGCGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 90 bp | TTGAGGAGCGCGGAGGAAGCCACAACGTCCCAGTACGCACCGGCGTaGGCTGCGACCGCGCTGGGGAGCATAGTGCGGCGCCAACCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSAEEATTSQYAPA*AATALGSIVRRQPV Trigger: GACCGGTTGGCGCCGCACTATGCTCCCCAGCGCGGTCGCAGCCCACGCCGGTGCGTACTGGGACGTTGTGGCTTCCTCCGCGCTCCTCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS TCA 90 bp | GGAAACTCTTGCCCAGGTTGCCAAAGCCGGGCGCAGCGGGGAGGTTaGGGAGCGCGGAGGAAGCCACAACGTCCCAGTACGCACCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GNSCPGCQSRAQRGG*GARRKPQRPSTHRR Trigger: ACGCCGGTGCGTACTGGGACGTTGTGGCTTCCTCCGCGCTCCTCAACCTCCCCGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 90 bp | GGGGTGCTCAGAAGGAAAGGTTTGGAAGGTGCTGGCGCTGAAGGCTaGAAGGTACAGTCTCGGTCCCCCGGAGCCCGGCCCGGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVLRRKGLEGAGAEG*KVQSRSPGARPGSL Trigger: GAGGCTGCCGGGCCGGGCTCCGGGGGACCGAGACTGTACCTTCCAGCCTTCAGCGCCAGCACCTTCCAAACCTTTCCTTCTGAGCACCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS TCA 90 bp | GAATGGCGGGGTGCTCAGAAGGAAAGGTTTGGAAGGTGCTGGCGCTaGAGGCTGGAAGGTACAGTCTCGGTCCCCCGGAGCCCGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EWRGAQKERFGRCWR*RLEGTVSVPRSPAR Trigger: CCGGGCCGGGCTCCGGGGGACCGAGACTGTACCTTCCAGCCTTCAGCGCCAGCACCTTCCAAACCTTTCCTTCTGAGCACCCCGCCATTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 90 bp | CCTGTGTCAGGAGAGGCAGCATGCTCTCTTCTCTTGGAAAAGCAGTaGAGGATGCAGGGCGCCGACAGGACCCACCGCAGCACGCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVSGEAACSLLLEKQ*RMQGADRTHRSTPS Trigger: ACTCGGCGTGCTGCGGTGGGTCCTGTCGGCGCCCTGCATCCTCCACTGCTTTTCCAAGAGAAGAGAGCATGCTGCCTCTCCTGACACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 90 bp | CAGGAGAGGCAGCATGCTCTCTTCTCTTGGAAAAGCAGTGGAGGATaGAGGGCGCCGACAGGACCCACCGCAGCACGCCGAGTAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: QERQHALFSWKSSGG*RAPTGPTAARRVEW Trigger: CCATTCTACTCGGCGTGCTGCGGTGGGTCCTGTCGGCGCCCTGCATCCTCCACTGCTTTTCCAAGAGAAGAGAGCATGCTGCCTCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 90 bp | CGCAGCACGCCGAGTAGAATGGCGGGGTGCTCAGAAGGAAAGGTTTaGAAGGTGCTGGCGCTGAAGGCTGGAAGGTACAGTCTCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTPSRMAGCSEGKV*KVLALKAGRYSLGP Trigger: GGGACCGAGACTGTACCTTCCAGCCTTCAGCGCCAGCACCTTCCAAACCTTTCCTTCTGAGCACCCCGCCATTCTACTCGGCGTGCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 90 bp | GGAATTAGAGTCCTGTGTCAGGAGAGGCAGCATGCTCTCTTCTCTTaGAAAAGCAGTGGAGGATGCAGGGCGCCGACAGGACCCACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GIRVLCQERQHALFS*KSSGGCRAPTGPTA Trigger: TGCGGTGGGTCCTGTCGGCGCCCTGCATCCTCCACTGCTTTTCCAAGAGAAGAGAGCATGCTGCCTCTCCTGACACAGGACTCTAATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | GCACTGATGAGGTACAAGCTAGCTGGCATTAGAGTCCAGATGTTACTATTAAGCCCCGGCGGGGCTAACTaGTTCGGCTGCGGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: ALMRYKLAGIRVQMLLLSPGGAN*FGCGAQ Trigger: CTGTGCCCCGCAGCCGAACAAGTTAGCCCCGCCGGG...GCTTAATAGTAACATCTGGACTCTAATGCCAGCTAGCTTGTACCTCATCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS TCA 90 bp | CATGGAGAAGGGAAACCCAGAGCAGACCGTGAGAGGGGATCCTCTTaGAGACCTACTTCTTGGATACACCTGTTGGAAAGCACTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HGEGKPRADRERGSS*RPTSWIHLLESTSF Trigger: AAAGGAAGTGCTTTCCAACAGGTGTATCCAAGAAGTAGGTCTTCAAGAGGATCCCCTCTCACGGTCTGCTCTGGGTTTCCCTTCTCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 90 bp | CCCTTGCTTCCAGCTTCTTCTTCAGAACATAAATATAAGGCACCTTaGAGTGAATTTGCTTCTGGGGGTGGTGCCCCTGAACTCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLPASSSEHKYKAP*SEFASGGGAPELSW Trigger: CCAGGAGAGTTCAGGGGCACCACCCCCAGAAGCAAATTCACTGCAAGGTGCCTTATATTTATGTTCTGAAGAAGAAGCTGGAAGCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CAAATTAAGCCTGAGTCTAGGGCCAAACAAGAGAACACTAGAGTGGGTTTCCTAGGGGGACGTCCCATATaGAAGGACATGGAGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QIKPESRAKQENTRVGFLGGRPI*KDMEKG Trigger: TCCCTTCTCCATGTCCTTCAATATGGGACGTCCCCC...TAGGAAACCCACTCTAGTGTTCTCTTGTTTGGCCCTAGACTCAGGCTTAATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATAAACTCTTGCCCAGGTaGCCAAAGCCGGGCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HVVKTQVDIPSPILFVQNKLLPR*PKPGAA Trigger: CGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTTT...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | GCACTGATGAGGTACAAGCTAGCTGGCATTAGAGTCCAGATGTTACTATTAAGCGCAGTGGCTCATTTGTaGAGGACTGCTGAGCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALMRYKLAGIRVQMLLLSAVAHL*RTAELR Trigger: CCTTAGCTCAGCAGTCCTCAACAAATGAGCCACTGC...GCTTAATAGTAACATCTGGACTCTAATGCCAGCTAGCTTGTACCTCATCAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 90 bp | GTGAGAGGGGATCCTCTTGAAGACCTACTTCTTGGATACACCTGTTaGAAAGCACTTCCTTTTCTTTGGAATTCCGCCATTTCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRGDPLEDLLLGYTC*KALPFLWNSAISSS Trigger: GGAGGATGAAATGGCGGAATTCCAAAGAAAAGGAAGTGCTTTCCAACAGGTGTATCCAAGAAGTAGGTCTTCAAGAGGATCCCCTCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGATCGATCAGGAAACTCTaGCCCAGGTTGCCAAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KGILFCKPWSRPIFTEKRSIRKL*PRLPKP Trigger: CGGCTTTGGCAACCTGGGCAAGAGTTTCCTGATCGA...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATAGAGGGACTGAGCACTaGAAAAGCCCACCGCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HVVKTQVDIPSPILFVQNRGTEH*KSPPRS Trigger: GGAACGCGGTGGGCTTTTCAAGTGCTCAGTCCCTCT...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTACCCTCCATCTTGGACTaGAGTGCTGTTGGGGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLPSILD*SAVGGR Trigger: ACGTCCCCCAACAGCACTCAAGTCCAAGATGGAGGG...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CAAATTAAGCCTGAGTCTAGGGCCAAACAAGAGAACACTAGAGTGGGTTTCCTATCCTTTAGTCCCAAGTaGATGGCAAGTTTCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QIKPESRAKQENTRVGFLSFSPK*MASFFR Trigger: CCGAAAGAAACTTGCCATCAACTTGGGACTAAAGGA...TAGGAAACCCACTCTAGTGTTCTCTTGTTTGGCCCTAGACTCAGGCTTAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATATGCCCCTCCGAGCTTaGGAATTAGAGTCCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HVVKTQVDIPSPILFVQNMPLRA*ELESCV Trigger: GACACAGGACTCTAATTCCAAAGCTCGGAGGGGCAT...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | GCACTGATGAGGTACAAGCTAGCTGGCATTAGAGTCCAGATGTTACTATTAAGCTCTTGGATACACCTGTaGGAAAGCACTTCCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALMRYKLAGIRVQMLLLSSWIHL*ESTSFS Trigger: AGAAAAGGAAGTGCTTTCCAACAGGTGTATCCAAGA...GCTTAATAGTAACATCTGGACTCTAATGCCAGCTAGCTTGTACCTCATCAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CAAATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTAGCATGCTCTCTTCTCTaGGAAAAGCAGTGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QIRSHHHYAAYSLTKCHLACSLL*EKQWRM Trigger: CATCCTCCACTGCTTTTCCAAGAGAAGAGAGCATGC...TAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATTAATTCTCCCTCCATCTaGGACTTGAGTGCTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGVKTSGLTQQIVTRNAINSPSI*DLSAVG Trigger: CCCAACAGCACTCAAGTCCAAGATGGAGGGAGAATT...AATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATCTAGCAGTGGCTCATTaGTTGAGGACTGCTGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: HVVKTQVDIPSPILFVQNLAVAH*LRTAEL Trigger: TAGCTCAGCAGTCCTCAACAAATGAGCCACTGCTAG...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | ATTAGAAGCCACCATCATTATGCAGCTTACTCACTAACAAAATGCCACTTAATGCCAGTAAGTACACCCTaGCTTCCAGCTTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRSHHHYAAYSLTKCHLMPVSTP*LPASSS Trigger: TGAAGAAGAAGCTGGAAGCAAGGGTGTACTTACTGG...CATTAAGTGGCATTTTGTTAGTGAGTAAGCTGCATAATGATGGTGGCTTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | CATGTGGTAAAGACACAGGTTGACATACCAAGTCCAATTCTATTCGTACAAAATTTGAAGACCTACTTCTaGGATACACCTGTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HVVKTQVDIPSPILFVQNLKTYF*DTPVGK Trigger: CTTTCCAACAGGTGTATCCAAGAAGTAGGTCTTCAA...ATTTTGTACGAATAGAATTGGACTTGGTATGTCAACCTGTGTCTTTACCACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | TCCTGGAGTAAAAACTTCTGGATTAACTCAGCAAATCGTTACCAGAAATGCAATTCAGTTCTGTCATACTaGCTGGGAGATTCTATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWSKNFWINSANRYQKCNSVLSY*LGDSIP Trigger: TGGAATAGAATCTCCCAGCAAGTATGACAGAACTGA...ATTGCATTTCTGGTAACGATTTGCTGAGTTAATCCAGAAGTTTTTACTCCAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS-3UTR CAA 90 bp | AAAGGCATTTTATTTTGCAAACCCTGGTCTAGGCCCATCTTTACAGAGAAGAGACTTGGCATAGACATTTaGTTTGGCCAATACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: KGILFCKPWSRPIFTEKRLGIDI*FGQYSI Trigger: AATACTGTATTGGCCAAACAAAATGTCTATGCCAAG...TCTCTTCTCTGTAAAGATGGGCCTAGACCAGGGTTTGCAAAATAAAATGCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 90 bp | CTGGGGAGCATAGTGCGGCGCCAACCGGTCTGCTGCGCGCCCGCCTaGCGCCCGCCTGTCGCCCGGGCGCCCCGCACCGCACCCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSIVRRQPVCCAPA*RPPVARAPRTAPRA Trigger: GGCTCTGGGTGCGGTGCGGGGCGCCCGGGCGACAGGCGGGCGCAAGGCGGGCGCGCAGCAGACCGGTTGGCGCCGCACTATGCTCCCCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 72 bp | ACCGCGCTGGGGAGCATAGTGCGGCGCCAACCGGTCTaGTGCGCGCCCGCCTTGCGCCCGCCTGTCGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TALGSIVRRQPV*CAPALRPPVAR Trigger: CCGGGCGACAGGCGGGCGCAAGGCGGGCGCGCAGCAGACCGGTTGGCGCCGCACTATGCTCCCCAGCGCGGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 72 bp | CGGGTCGTGGGGCGCGGGCGGCTGCAGCCTGGGCGTTaGGGCGCCCCCGACCCGCAGCAAATTCTCGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVVGRGRLQPGR*GAPDPQQILDQ Trigger: CTGATCGAGAATTTGCTGCGGGTCGGGGGCGCCCCAACGCCCAGGCTGCAGCCGCCCGCGCCCCACGACCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 72 bp | GCGGAGGAAGCCACAACGTCCCAGTACGCACCGGCGTaGGCTGCGACCGCGCTGGGGAGCATAGTGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AEEATTSQYAPA*AATALGSIVRR Trigger: GCGCCGCACTATGCTCCCCAGCGCGGTCGCAGCCCACGCCGGTGCGTACTGGGACGTTGTGGCTTCCTCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 72 bp | GGAAGCCACAACGTCCCAGTACGCACCGGCGTGGGCTaGGACCGCGCTGGGGAGCATAGTGCGGCGCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: GSHNVPVRTGVG*DRAGEHSAAPT Trigger: GGTTGGCGCCGCACTATGCTCCCCAGCGCGGTCGCAGCCCACGCCGGTGCGTACTGGGACGTTGTGGCTTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS TCA 72 bp | CCCGGCCCGGCAGCCTCGCACTGTCCGCAGAGGGACTaGGCACTTGAAAAGCCCACCGCGTTCCGTAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PGPAASHCPQRD*ALEKPTAFRRA Trigger: CGCCCTACGGAACGCGGTGGGCTTTTCAAGTGCTCAGTCCCTCTGCGGACAGTGCGAGGCTGCCGGGCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 72 bp | CGGCAGCCTCGCACTGTCCGCAGAGGGACTGAGCACTaGAAAAGCCCACCGCGTTCCGTAGGGCGCCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQPRTVRRGTEH*KSPPRSVGRPG Trigger: GCCGGGGCGCCCTACGGAACGCGGTGGGCTTTTCAAGTGCTCAGTCCCTCTGCGGACAGTGCGAGGCTGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS TCA 72 bp | TGCCCAGGTTGCCAAAGCCGGGCGCAGCGGGGAGGTTaGGGAGCGCGGAGGAAGCCACAACGTCCCAGTACG | + |
|
Preference number: 6 (lower is better) Translates to: CPGCQSRAQRGG*GARRKPQRPST Trigger: CGTACTGGGACGTTGTGGCTTCCTCCGCGCTCCTCAACCTCCCCGCTGCGCCCGGCTTTGGCAACCTGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 90 bp | AGGAAACTCTTGCCCAGGTTGCCAAAGCCGGGCGCAGCGGGGAGGTaGAGGAGCGCGGAGGAAGCCACAACGTCCCAGTACGCACCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RKLLPRLPKPGAAGR*RSAEEATTSQYAPA Trigger: CGCCGGTGCGTACTGGGACGTTGTGGCTTCCTCCGCGCTCCTCAACCTCCCCGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 72 bp | CCCCCGACCCGCAGCAAATTCTCGATCAGGAAACTCTaGCCCAGGTTGCCAAAGCCGGGCGCAGCGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PPTRSKFSIRKL*PRLPKPGAAGR Trigger: CCTCCCCGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTTTCCTGATCGAGAATTTGCTGCGGGTCGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 90 bp | CCCCCGACCCGCAGCAAATTCTCGATCAGGAAACTCTTGCCCAGGTaGCCAAAGCCGGGCGCAGCGGGGAGGTTGAGGAGCGCGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PPTRSKFSIRKLLPR*PKPGAAGRLRSAEE Trigger: TTCCTCCGCGCTCCTCAACCTCCCCGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTTTCCTGATCGAGAATTTGCTGCGGGTCGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 72 bp | CCCCGACCCGCAGCAAATTCTCGATCAGGAAACTCTTaGCCAGGTTGCCAAAGCCGGGCGCAGCGGGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PRPAANSRSGNS*PGCQSRAQRGG Trigger: ACCTCCCCGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTTTCCTGATCGAGAATTTGCTGCGGGTCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 72 bp | AGAAGGAAAGGTTTGGAAGGTGCTGGCGCTGAAGGCTaGAAGGTACAGTCTCGGTCCCCCGGAGCCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRKGLEGAGAEG*KVQSRSPGARP Trigger: GGGCCGGGCTCCGGGGGACCGAGACTGTACCTTCCAGCCTTCAGCGCCAGCACCTTCCAAACCTTTCCTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS GCA 72 bp | CAGCATGCTCTCTTCTCTTGGAAAAGCAGTGGAGGATaGAGGGCGCCGACAGGACCCACCGCAGCACGCCGA | + |
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Preference number: 6 (lower is better) Translates to: QHALFSWKSSGG*RAPTGPTAARR Trigger: TCGGCGTGCTGCGGTGGGTCCTGTCGGCGCCCTGCATCCTCCACTGCTTTTCCAAGAGAAGAGAGCATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 72 bp | GGAGAGGCAGCATGCTCTCTTCTCTTGGAAAAGCAGTaGAGGATGCAGGGCGCCGACAGGACCCACCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GEAACSLLLEKQ*RMQGADRTHRS Trigger: GCTGCGGTGGGTCCTGTCGGCGCCCTGCATCCTCCACTGCTTTTCCAAGAGAAGAGAGCATGCTGCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS TCA 72 bp | GGTGCTCAGAAGGAAAGGTTTGGAAGGTGCTGGCGCTaGAGGCTGGAAGGTACAGTCTCGGTCCCCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GAQKERFGRCWR*RLEGTVSVPRS Trigger: GCTCCGGGGGACCGAGACTGTACCTTCCAGCCTTCAGCGCCAGCACCTTCCAAACCTTTCCTTCTGAGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 72 bp | CGCAGCAAATTCTCGATCAGGAAACTCTTGCCCAGGTaGCCAAAGCCGGGCGCAGCGGGGAGGTTGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSKFSIRKLLPR*PKPGAAGRLRS Trigger: GCTCCTCAACCTCCCCGCTGCGCCCGGCTTTGGCAACCTGGGCAAGAGTTTCCTGATCGAGAATTTGCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 72 bp | CCGAGTAGAATGGCGGGGTGCTCAGAAGGAAAGGTTTaGAAGGTGCTGGCGCTGAAGGCTGGAAGGTACAGT | + |
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Preference number: 6 (lower is better) Translates to: PSRMAGCSEGKV*KVLALKAGRYS Trigger: ACTGTACCTTCCAGCCTTCAGCGCCAGCACCTTCCAAACCTTTCCTTCTGAGCACCCCGCCATTCTACTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 90 bp | TCTCCCTCCATCTTGGACTTGAGTGCTGTTGGGGGACGTCCCATATaGAAGGACATGGAGAAGGGAAACCCAGAGCAGACCGTGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPSILDLSAVGGRPI*KDMEKGNPEQTVRG Trigger: CCCTCTCACGGTCTGCTCTGGGTTTCCCTTCTCCATGTCCTTCAATATGGGACGTCCCCCAACAGCACTCAAGTCCAAGATGGAGGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS TCA 72 bp | GGGAAACCCAGAGCAGACCGTGAGAGGGGATCCTCTTaGAGACCTACTTCTTGGATACACCTGTTGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GKPRADRERGSS*RPTSWIHLLES Trigger: GCTTTCCAACAGGTGTATCCAAGAAGTAGGTCTTCAAGAGGATCCCCTCTCACGGTCTGCTCTGGGTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 72 bp | ATCTTGGACTTGAGTGCTGTTGGGGGACGTCCCATATaGAAGGACATGGAGAAGGGAAACCCAGAGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: ILDLSAVGGRPI*KDMEKGNPEQT Trigger: GGTCTGCTCTGGGTTTCCCTTCTCCATGTCCTTCAATATGGGACGTCCCCCAACAGCACTCAAGTCCAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 72 bp | CTGAAGGTTCTGGAGAATTCTCCCTCCATCTTGGACTaGAGTGCTGTTGGGGGACGTCCCATATTGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LKVLENSPSILD*SAVGGRPILKD Trigger: GTCCTTCAATATGGGACGTCCCCCAACAGCACTCAAGTCCAAGATGGAGGGAGAATTCTCCAGAACCTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 72 bp | GAATTTGCTTCTGGGGGTGGTGCCCCTGAACTCTCCTaGATTAGTCTTTCTGAAGGTTCTGGAGAATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EFASGGGAPELS*ISLSEGSGEFS Trigger: GGAGAATTCTCCAGAACCTTCAGAAAGACTAATCCAGGAGAGTTCAGGGGCACCACCCCCAGAAGCAAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 90 bp | CCTGGATTAGTCTTTCTGAAGGTTCTGGAGAATTCTCCCTCCATCTaGGACTTGAGTGCTGTTGGGGGACGTCCCATATTGAAGGACATG | + |
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Preference number: 6 (lower is better) Translates to: PGLVFLKVLENSPSI*DLSAVGGRPILKDM Trigger: CATGTCCTTCAATATGGGACGTCCCCCAACAGCACTCAAGTCCAAGATGGAGGGAGAATTCTCCAGAACCTTCAGAAAGACTAATCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 72 bp | CTTCAGAACATAAATATAAGGCACCTTGCAGTGAATTaGCTTCTGGGGGTGGTGCCCCTGAACTCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LQNINIRHLAVN*LLGVVPLNSPG Trigger: TCCAGGAGAGTTCAGGGGCACCACCCCCAGAAGCAAATTCACTGCAAGGTGCCTTATATTTATGTTCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 90 bp | TTAGTCTTTCTGAAGGTTCTGGAGAATTCTCCCTCCATCTTGGACTaGAGTGCTGTTGGGGGACGTCCCATATTGAAGGACATGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVFLKVLENSPSILD*SAVGGRPILKDMEK Trigger: CTTCTCCATGTCCTTCAATATGGGACGTCCCCCAACAGCACTCAAGTCCAAGATGGAGGGAGAATTCTCCAGAACCTTCAGAAAGACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CAA 90 bp | CAGCTTCTTCTTCAGAACATAAATATAAGGCACCTTGCAGTGAATTaGCTTCTGGGGGTGGTGCCCCTGAACTCTCCTGGATTAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QLLLQNINIRHLAVN*LLGVVPLNSPGLVF Trigger: AAAGACTAATCCAGGAGAGTTCAGGGGCACCACCCCCAGAAGCAAATTCACTGCAAGGTGCCTTATATTTATGTTCTGAAGAAGAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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| CDS CCA 72 bp | GATCCTCTTGAAGACCTACTTCTTGGATACACCTGTTaGAAAGCACTTCCTTTTCTTTGGAATTCCGCCATT | + |
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Preference number: 6 (lower is better) Translates to: DPLEDLLLGYTC*KALPFLWNSAI Trigger: AATGGCGGAATTCCAAAGAAAAGGAAGTGCTTTCCAACAGGTGTATCCAAGAAGTAGGTCTTCAAGAGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332700.6 |
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