Pregenerated sensors for DBX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000109851Ensembl transcript IDs: ENST00000524983.3
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGGTGCTGGGGGTCGGAGGACGCGTGGTAGGCCAGGCGGTGGCTaGGGCTGCCCGGGCCCTCCTCCTCCTCTTCGTTCCCAGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: AGAGGRRTRGRPGGG*GCPGPPPPLRSQGP Trigger: AGGGCCCTGGGAACGAAGAGGAGGAGGAGGGCCCGGGCAGCCCCAGCCACCGCCTGGCCTACCACGCGTCCTCCGACCCCCAGCACCTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 90 bp | CCAGCGCCTTCCGCTGCACGTCGGAGAAGACTGCTCGACGCAGCATaGCCCGCCGAGGCTTCCCGCGCGCGGCCAGCGGCCAGGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PAPSAARRRRLLDAA*PAEASRARPAARRR Trigger: CCTTCTCCTGGCCGCTGGCCGCGCGCGGGAAGCCTCGGCGGGGCATGCTGCGTCGAGCAGTCTTCTCCGACGTGCAGCGGAAGGCGCTGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CCA 90 bp | GGGCTGCCCGGGCCCTCCTCCTCCTCTTCGTTCCCAGGGCCCTTCTaGCCCACGTCGCTGAGGTCCGGGTGCGGATTGAGCTTGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GLPGPSSSSSFPGPF*PTSLRSGCGLSLVG Trigger: GCCCACCAAGCTCAATCCGCACCCGGACCTCAGCGACGTGGGCCAGAAGGGCCCTGGGAACGAAGAGGAGGAGGAGGGCCCGGGCAGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 90 bp | CTGGAACATCTTCTCCAGCGCCTTCCGCTGCACGTCGGAGAAGACTaGTCGACGCAGCATGCCCCGCCGAGGCTTCCCGCGCGCGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LEHLLQRLPLHVGED*STQHAPPRLPARGQ Trigger: CTGGCCGCGCGCGGGAAGCCTCGGCGGGGCATGCTGCGTCGAGCAGTCTTCTCCGACGTGCAGCGGAAGGCGCTGGAGAAGATGTTCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 90 bp | TCTTCGTTCCCAGGGCCCTTCTGGCCCACGTCGCTGAGGTCCGGGTaGGGATTGAGCTTGGTGGGCAGGGTCTGCTCGCGACAGCCCCCG | + |
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Preference number: 5 (lower is better) Translates to: SSFPGPFWPTSLRSG*GLSLVGRVCSRQPP Trigger: CGGGGGCTGTCGCGAGCAGACCCTGCCCACCAAGCTCAATCCGCACCCGGACCTCAGCGACGTGGGCCAGAAGGGCCCTGGGAACGAAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 90 bp | ACGTCGCTGAGGTCCGGGTGCGGATTGAGCTTGGTGGGCAGGGTCTaGTCGCGACAGCCCCCGCTAGACAGGAGTTCGCGCTCCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TSLRSGCGLSLVGRV*SRQPPLDRSSRSLE Trigger: CTCCAAGGAGCGCGAACTCCTGTCTAGCGGGGGCTGTCGCGAGCAGACCCTGCCCACCAAGCTCAATCCGCACCCGGACCTCAGCGACGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CCA 90 bp | TCCACCAGGAAGCTGGAGTGGCCGGAAAATGCCGACTGCAAGGACTaGGGCAGCGTCAAGGTGGGCGTGGGCCGCAGGAGGCTAGGGTAC | + |
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Preference number: 5 (lower is better) Translates to: STRKLEWPENADCKD*GSVKVGVGRRRLGY Trigger: GTACCCTAGCCTCCTGCGGCCCACGCCCACCTTGACGCTGCCCCAGTCCTTGCAGTCGGCATTTTCCGGCCACTCCAGCTTCCTGGTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 90 bp | ATCAGATCCTCCACCAGGAAGCTGGAGTGGCCGGAAAATGCCGACTaGAAGGACTGGGGCAGCGTCAAGGTGGGCGTGGGCCGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: IRSSTRKLEWPENAD*KDWGSVKVGVGRRR Trigger: CCTCCTGCGGCCCACGCCCACCTTGACGCTGCCCCAGTCCTTGCAGTCGGCATTTTCCGGCCACTCCAGCTTCCTGGTGGAGGATCTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CCA 90 bp | AGGAGAGGATGGCGTTCACTCCAAACTTCAGAAACGTCGTCTCGCTaGCAGGGGAGAAGGCAGTCGGCGGAGAGCCGCCCCGTCGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RRGWRSLQTSETSSR*QGRRQSAESRPVGC Trigger: GCAGCCGACGGGGCGGCTCTCCGCCGACTGCCTTCTCCCCTGCCAGCGAGACGACGTTTCTGAAGTTTGGAGTGAACGCCATCCTCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 90 bp | AGCTTGGCCGCCAGCTTCTTGCGGTCGGGCTTGCTGATGTACTTCTaGTTCTGGAACATCTTCTCCAGCGCCTTCCGCTGCACGTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: SLAASFLRSGLLMYF*FWNIFSSAFRCTSE Trigger: CTCCGACGTGCAGCGGAAGGCGCTGGAGAAGATGTTCCAGAAGCAGAAGTACATCAGCAAGCCCGACCGCAAGAAGCTGGCGGCCAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CCA 90 bp | GGAGCAAGGCTGGGGATGTTTCTGTTCTGGGCCCCGAGGAGAGGATaGCGTTCACTCCAAACTTCAGAAACGTCGTCTCGCTGGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: GARLGMFLFWAPRRG*RSLQTSETSSRWQG Trigger: CCCCTGCCAGCGAGACGACGTTTCTGAAGTTTGGAGTGAACGCCATCCTCTCCTCGGGGCCCAGAACAGAAACATCCCCAGCCTTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 90 bp | CCCCACCTCTTCGATTTCAAAGCACTTAAAAATAGTACTCTGGCGTaGGAGCGGCTTCTAGGACACGGTGATTTCCTCCTGTTCCTCGCC | + |
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Preference number: 5 (lower is better) Translates to: PHLFDFKALKNSTLA*ERLLGHGDFLLFLA Trigger: GGCGAGGAACAGGAGGAAATCACCGTGTCCTAGAAGCCGCTCGCACGCCAGAGTACTATTTTTAAGTGCTTTGAAATCGAAGAGGTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 72 bp | TCCGCTGCACGTCGGAGAAGACTGCTCGACGCAGCATaGCCCGCCGAGGCTTCCCGCGCGCGGCCAGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SAARRRRLLDAA*PAEASRARPAA Trigger: GGCCGCTGGCCGCGCGCGGGAAGCCTCGGCGGGGCATGCTGCGTCGAGCAGTCTTCTCCGACGTGCAGCGGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 72 bp | CTTCTCCAGCGCCTTCCGCTGCACGTCGGAGAAGACTaGTCGACGCAGCATGCCCCGCCGAGGCTTCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: LLQRLPLHVGED*STQHAPPRLPA Trigger: CGCGGGAAGCCTCGGCGGGGCATGCTGCGTCGAGCAGTCTTCTCCGACGTGCAGCGGAAGGCGCTGGAGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CAA 72 bp | CCCTTCTGGCCCACGTCGCTGAGGTCCGGGTGCGGATaGAGCTTGGTGGGCAGGGTCTGCTCGCGACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: PFWPTSLRSGCG*SLVGRVCSRQP Trigger: GGGCTGTCGCGAGCAGACCCTGCCCACCAAGCTCAATCCGCACCCGGACCTCAGCGACGTGGGCCAGAAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 72 bp | AGGTCCGGGTGCGGATTGAGCTTGGTGGGCAGGGTCTaGTCGCGACAGCCCCCGCTAGACAGGAGTTCGCGC | + |
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Preference number: 6 (lower is better) Translates to: RSGCGLSLVGRV*SRQPPLDRSSR Trigger: GCGCGAACTCCTGTCTAGCGGGGGCTGTCGCGAGCAGACCCTGCCCACCAAGCTCAATCCGCACCCGGACCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CCA 72 bp | AAGCTGGAGTGGCCGGAAAATGCCGACTGCAAGGACTaGGGCAGCGTCAAGGTGGGCGTGGGCCGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KLEWPENADCKD*GSVKVGVGRRR Trigger: CCTCCTGCGGCCCACGCCCACCTTGACGCTGCCCCAGTCCTTGCAGTCGGCATTTTCCGGCCACTCCAGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 72 bp | TCCACCAGGAAGCTGGAGTGGCCGGAAAATGCCGACTaGAAGGACTGGGGCAGCGTCAAGGTGGGCGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: STRKLEWPENAD*KDWGSVKVGVG Trigger: GCCCACGCCCACCTTGACGCTGCCCCAGTCCTTGCAGTCGGCATTTTCCGGCCACTCCAGCTTCCTGGTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 72 bp | CAGATCCTCCACCAGGAAGCTGGAGTGGCCGGAAAATaGCGACTGCAAGGACTGGGGCAGCGTCAAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QILHQEAGVAGK*RLQGLGQRQGG Trigger: CCCACCTTGACGCTGCCCCAGTCCTTGCAGTCGGCATTTTCCGGCCACTCCAGCTTCCTGGTGGAGGATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 72 bp | GCCAGCTTCTTGCGGTCGGGCTTGCTGATGTACTTCTaGTTCTGGAACATCTTCTCCAGCGCCTTCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASFLRSGLLMYF*FWNIFSSAFRC Trigger: GCAGCGGAAGGCGCTGGAGAAGATGTTCCAGAAGCAGAAGTACATCAGCAAGCCCGACCGCAAGAAGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CCA 72 bp | CTGGGGATGTTTCTGTTCTGGGCCCCGAGGAGAGGATaGCGTTCACTCCAAACTTCAGAAACGTCGTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LGMFLFWAPRRG*RSLQTSETSSR Trigger: GCGAGACGACGTTTCTGAAGTTTGGAGTGAACGCCATCCTCTCCTCGGGGCCCAGAACAGAAACATCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CCA 72 bp | GAAAAGACCCTTCGAAGTAGGGAAAGGCGAAGGTCTTaGGAGGGACGCTCTGGAGCAAGGCTGGGGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: EKTLRSRERRRS*EGRSGARLGMF Trigger: AAACATCCCCAGCCTTGCTCCAGAGCGTCCCTCCCAAGACCTTCGCCTTTCCCTACTTCGAAGGGTCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS CAA 90 bp | ATTTTCACCTGCGAGTCTTTCAGGCCCAGCTTGGCCGCCAGCTTCTaGCGGTCGGGCTTGCTGATGTACTTCTGCTTCTGGAACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: IFTCESFRPSLAASF*RSGLLMYFCFWNIF Trigger: GAAGATGTTCCAGAAGCAGAAGTACATCAGCAAGCCCGACCGCAAGAAGCTGGCGGCCAAGCTGGGCCTGAAAGACTCGCAGGTGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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| CDS GCA 72 bp | TTCGATTTCAAAGCACTTAAAAATAGTACTCTGGCGTaGGAGCGGCTTCTAGGACACGGTGATTTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FDFKALKNSTLA*ERLLGHGDFLL Trigger: CAGGAGGAAATCACCGTGTCCTAGAAGCCGCTCGCACGCCAGAGTACTATTTTTAAGTGCTTTGAAATCGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524983.3 |
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