RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DBT (Homo sapiens)

Ensembl gene IDs: ENSG00000137992

Ensembl transcript IDs: ENST00000370131.3, ENST00000370132.8, ENST00000681617.1, ENST00000681780.1

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCATGGACCAGCACTGCCACTAAGGCTGCGCTCCTGCCCCTTTaGCCCTCTTCAGGGAATCCTGCTATCCTAAGGGCCGTGCACACT +
Preference number: 1 (lower is better)
Translates to: ASWTSTATKAALLPL*PSSGNPAILRAVHT
Trigger: AGTGTGCACGGCCCTTAGGATAGCAGGATTCCCTGAAGAGGGCCAAAGGGGCAGGAGCGCAGCCTTAGTGGCAGTGCTGGTCCATGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp CTTTTCCTCCTCCCAAACACCCATCCCTTGCTTTGTAGAGCCTCATaGACCAGCACTGCCACTAAGGCTGCGCTCCTGCCCCTTTGGCCC +
Preference number: 1 (lower is better)
Translates to: LFLLPNTHPLLCRAS*TSTATKAALLPLWP
Trigger: GGGCCAAAGGGGCAGGAGCGCAGCCTTAGTGGCAGTGCTGGTCCATGAGGCTCTACAAAGCAAGGGATGGGTGTTTGGGAGGAGGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp ATCTGGTACAGTTCTGGATGTGAGGAAGAGACTGAAGGATCAAAGTaGGGCAATGGGGGTTCAACATGGGGCAGGGATCAGGAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: IWYSSGCEEETEGSK*GNGGSTWGRDQEEE
Trigger: CTCTTCCTCCTGATCCCTGCCCCATGTTGAACCCCCATTGCCCCACTTTGATCCTTCAGTCTCTTCCTCACATCCAGAACTGTACCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 90 bp TCAGTTGTTTCTGTGGCTCTCCTCTGGACTCTCTCCAAATTCTCCTaGTCAGTTTTAGCAAGCTGGCCTGGAGTTCTCTCACACGGTCTG +
Preference number: 1 (lower is better)
Translates to: SVVSVALLWTLSKFS*SVLASWPGVLSHGL
Trigger: CAGACCGTGTGAGAGAACTCCAGGCCAGCTTGCTAAAACTGAGCAGGAGAATTTGGAGAGAGTCCAGAGGAGAGCCACAGAAACAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp CTCCTCTGGACTCTCTCCAAATTCTCCTGCTCAGTTTTAGCAAGCTaGCCTGGAGTTCTCTCACACGGTCTGGCTAGCACAGTAATTTGC +
Preference number: 1 (lower is better)
Translates to: LLWTLSKFSCSVLAS*PGVLSHGLASTVIC
Trigger: GCAAATTACTGTGCTAGCCAGACCGTGTGAGAGAACTCCAGGCCAGCTTGCTAAAACTGAGCAGGAGAATTTGGAGAGAGTCCAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp CCAAGTTTAATACAGTTTGATGGCTCTTCTCGGGGTGTAGATGAGTaGGGGCACTTACATTGCCCGTTGGAGGAGACTCTGCCTTCTGCT +
Preference number: 1 (lower is better)
Translates to: PSLIQFDGSSRGVDE*GHLHCPLEETLPSA
Trigger: AGCAGAAGGCAGAGTCTCCTCCAACGGGCAATGTAAGTGCCCCCACTCATCTACACCCCGAGAAGAGCCATCAAACTGTATTAAACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 90 bp AGCTGGCCTGGAGTTCTCTCACACGGTCTGGCTAGCACAGTAATTTaGTTGTGGTTAAAAGCCTTTGTGCTCAGTACTGAGACTGCCACA +
Preference number: 1 (lower is better)
Translates to: SWPGVLSHGLASTVI*LWLKAFVLSTETAT
Trigger: TGTGGCAGTCTCAGTACTGAGCACAAAGGCTTTTAACCACAAGCAAATTACTGTGCTAGCCAGACCGTGTGAGAGAACTCCAGGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 90 bp TGGGATCGAGGCCAGGTTCTTGTGCAATTTGTGAAACCTTTGGTTTaGAGAGTTGTTAGCGTAGTGGCTCGGCTCATCAGCTCTGAGCAT +
Preference number: 1 (lower is better)
Translates to: WDRGQVLVQFVKPLV*RVVSVVARLISSEH
Trigger: ATGCTCAGAGCTGATGAGCCGAGCCACTACGCTAACAACTCTGCAAACCAAAGGTTTCACAAATTGCACAAGAACCTGGCCTCGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 90 bp CTAAGACTCAAGTGTGGACAGAGTATTCTATTCTCCTGCCCACACTaGTGGGCACATGAACCAAGAAAGACAAAAGGTCTCCTGGGGGTG +
Preference number: 1 (lower is better)
Translates to: LRLKCGQSILFSCPH*WAHEPRKTKGLLGV
Trigger: CACCCCCAGGAGACCTTTTGTCTTTCTTGGTTCATGTGCCCATCAGTGTGGGCAGGAGAATAGAATACTCTGTCCACACTTGAGTCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 90 bp GTGTGGACAGAGTATTCTATTCTCCTGCCCACACTGATGGGCACATaGACCAAGAAAGACAAAAGGTCTCCTGGGGGTGTGTGTATATAT +
Preference number: 1 (lower is better)
Translates to: VWTEYSILLPTLMGT*TKKDKRSPGGVCIY
Trigger: ATATATACACACACCCCCAGGAGACCTTTTGTCTTTCTTGGTTCATGTGCCCATCAGTGTGGGCAGGAGAATAGAATACTCTGTCCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 90 bp GCCCGTTGGAGGAGACTCTGCCTTCTGCTCAGCCAAAAATCAGTGTaGATCCCTTTGACTGTTCCATCTTTCCCCATATCAAACCTAAAT +
Preference number: 1 (lower is better)
Translates to: ARWRRLCLLLSQKSV*IPLTVPSFPISNLN
Trigger: ATTTAGGTTTGATATGGGGAAAGATGGAACAGTCAAAGGGATTCACACTGATTTTTGGCTGAGCAGAAGGCAGAGTCTCCTCCAACGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 90 bp CTCTGTCCAAAGCAACAATTGAACCAACAGGCCCTTCTAATCTTATaGCAGCAACACAATGGGATCGAGGCCAGGTTCTTGTGCAATTTG +
Preference number: 1 (lower is better)
Translates to: LCPKQQLNQQALLIL*QQHNGIEARFLCNL
Trigger: CAAATTGCACAAGAACCTGGCCTCGATCCCATTGTGTTGCTGGCATAAGATTAGAAGGGCCTGTTGGTTCAATTGTTGCTTTGGACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp GCCCACACTGATGGGCACATGAACCAAGAAAGACAAAAGGTCTCCTaGGGGTGTGTGTATATATATGTGTGTGTGTATACACACACACAC +
Preference number: 1 (lower is better)
Translates to: AHTDGHMNQERQKVS*GCVYIYVCVYTHTH
Trigger: GTGTGTGTGTGTATACACACACACATATATATACACACACCCCCAGGAGACCTTTTGTCTTTCTTGGTTCATGTGCCCATCAGTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 90 bp AGAAATCAGCAAGGAAATCCATCAAGTGATTTTGGGGATCCACTTTaGGTGGGAAGCCATGAGAAATGCCCAAACAAGCCAGTGGGCTTT +
Preference number: 1 (lower is better)
Translates to: RNQQGNPSSDFGDPL*VGSHEKCPNKPVGF
Trigger: AAAGCCCACTGGCTTGTTTGGGCATTTCTCATGGCTTCCCACTCAAAGTGGATCCCCAAAATCACTTGATGGATTTCCTTGCTGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 90 bp TGGAACACTGGCTCCTTCTATCTTGTGTGGTGCCATCTTCAACCTTaGAGGGTGCATGTTGGAGGGGAAGAGATAGAATATGAAGAATCT +
Preference number: 1 (lower is better)
Translates to: WNTGSFYLVWCHLQP*RVHVGGEEIEYEES
Trigger: AGATTCTTCATATTCTATCTCTTCCCCTCCAACATGCACCCTTCAAGGTTGAAGATGGCACCACACAAGATAGAAGGAGCCAGTGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp TGCAATTATTCTTGTCATGCTTCAGTTGTTTCTGTGGCTCTCCTCTaGACTCTCTCCAAATTCTCCTGCTCAGTTTTAGCAAGCTGGCCT +
Preference number: 1 (lower is better)
Translates to: CNYSCHASVVSVALL*TLSKFSCSVLASWP
Trigger: AGGCCAGCTTGCTAAAACTGAGCAGGAGAATTTGGAGAGAGTCCAGAGGAGAGCCACAGAAACAACTGAAGCATGACAAGAATAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp ATCCACTTTGAGTGGGAAGCCATGAGAAATGCCCAAACAAGCCAGTaGGCTTTCCAGACTAAGAGCTATCACTTTCACTCTTTCTACATA +
Preference number: 1 (lower is better)
Translates to: IHFEWEAMRNAQTSQ*AFQTKSYHFHSFYI
Trigger: TATGTAGAAAGAGTGAAAGTGATAGCTCTTAGTCTGGAAAGCCCACTGGCTTGTTTGGGCATTTCTCATGGCTTCCCACTCAAAGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp ACAATTGAACCAACAGGCCCTTCTAATCTTATGCCAGCAACACAATaGGATCGAGGCCAGGTTCTTGTGCAATTTGTGAAACCTTTGGTT +
Preference number: 1 (lower is better)
Translates to: TIEPTGPSNLMPATQ*DRGQVLVQFVKPLV
Trigger: AACCAAAGGTTTCACAAATTGCACAAGAACCTGGCCTCGATCCCATTGTGTTGCTGGCATAAGATTAGAAGGGCCTGTTGGTTCAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp GACATCCATCTTCTGATCCTTCCAGATAAGATCGGTAACCTTTACTaGATGGCTCATAGCATCTGGGTTATTACCTACCAAGAACAGTGT +
Preference number: 1 (lower is better)
Translates to: DIHLLILPDKIGNLY*MAHSIWVITYQEQC
Trigger: ACACTGTTCTTGGTAGGTAATAACCCAGATGCTATGAGCCATCCAGTAAAGGTTACCGATCTTATCTGGAAGGATCAGAAGATGGATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 90 bp GATATAGATGACCTCTCTATAACAGAACTGCAATTATTCTTGTCATaGTTCAGTTGTTTCTGTGGCTCTCCTCTGGACTCTCTCCAAATT +
Preference number: 1 (lower is better)
Translates to: DIDDLSITELQLFLS*FSCFCGSPLDSLQI
Trigger: AATTTGGAGAGAGTCCAGAGGAGAGCCACAGAAACAACTGAAGCATGACAAGAATAATTGCAGTTCTGTTATAGAGAGGTCATCTATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 90 bp TGCCTATCAATAGATAATTGGTTAAATTATGGGACATCCATCTTCTaGTCCTTCCAGATAAGATCGGTAACCTTTACTGGATGGCTCATA +
Preference number: 1 (lower is better)
Translates to: CLSIDNWLNYGTSIF*SFQIRSVTFTGWLI
Trigger: TATGAGCCATCCAGTAAAGGTTACCGATCTTATCTGGAAGGATCAGAAGATGGATGTCCCATAATTTAACCAATTATCTATTGATAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp CTTCCAGATAAGATCGGTAACCTTTACTGGATGGCTCATAGCATCTaGGTTATTACCTACCAAGAACAGTGTTTTATGCAGTTATTTAAT +
Preference number: 1 (lower is better)
Translates to: LPDKIGNLYWMAHSI*VITYQEQCFMQLFN
Trigger: ATTAAATAACTGCATAAAACACTGTTCTTGGTAGGTAATAACCCAGATGCTATGAGCCATCCAGTAAAGGTTACCGATCTTATCTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 90 bp AATATGAAGAATCTCTTGAGAAGTGTTATGGGCCATGTCTGGAAATaGCCTACATTACTTCAACCCATATACCCATATTCTAATAGTTAC +
Preference number: 1 (lower is better)
Translates to: NMKNLLRSVMGHVWK*PTLLQPIYPYSNSY
Trigger: GTAACTATTAGAATATGGGTATATGGGTTGAAGTAATGTAGGCCATTTCCAGACATGGCCCATAACACTTCTCAAGAGATTCTTCATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAAGCCTCCCGAGTAGGTaGACTACAGGCGCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPSLPSR*TTGACH
Trigger: GTGGCAGGCGCCTGTAGTCCACCTACTCGGGAGGCT...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 90 bp ATGCCTGTAATCTCAGCTACTTGGGAGTTGAGGAATGAGCACTGTTaGAACCCAGGAGACGGAGGTTGCAGTGAGCAGAGCCGAGATCGC +
Preference number: 2 (lower is better)
Translates to: MPVISATWELRNEHC*NPGDGGCSEQSRDR
Trigger: GCGATCTCGGCTCTGCTCACTGCAACCTCCGTCTCCTGGGTTCAAACAGTGCTCATTCCTCAACTCCCAAGTAGCTGAGATTACAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCACTTGTCTCAGCTTCCTaGGTAGCTGGGACTATAGGT +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPLVSAS*VAGTIG
Trigger: ACCTATAGTCCCAGCTACTCAGGAAGCTGAGACAAG...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGACTCCTGACCTCAGGTaGTCTGGCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRTPDLR*SGHLGL
Trigger: GAGGCCGAGGTGGCCAGATCACCTGAGGTCAGGAGT...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCACAAACACCCATCCCTTaGTTTGTAGAGCCTCATGGA +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPQTPIP*FVEPHG
Trigger: TCCATGAGGCTCTACAAAGCAAGGGATGGGTGTTTG...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATACATGAGGGAAGTTTaGAAAGGTGAAGGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPYMREV*KGEGLP
Trigger: GGGAAGACCTTCACCTTTGCAAACTTCCCTCATGTA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGCGCTCCTGCCCCTTTaGCCCTCTTCAGGGAATCCT +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISALLPL*PSSGNP
Trigger: AGGATTCCCTGAAGAGGGCCAAAGGGGCAGGAGCGC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 90 bp ACACAATGGGATCGAGGCCAGGTTCTTGTGCAATTTGTGAAACCTTaGGTTTGCAGAGTTGTTAGCGTAGTGGCTCGGCTCATCAGCTCT +
Preference number: 2 (lower is better)
Translates to: TQWDRGQVLVQFVKP*VCRVVSVVARLISS
Trigger: AGAGCTGATGAGCCGAGCCACTACGCTAACAACTCTGCAAACCAAAGGTTTCACAAATTGCACAAGAACCTGGCCTCGATCCCATTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGTGGTCTCGAACTCCTaGCCTCAGGTGATCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISVVSNS*PQVIWP
Trigger: TGGCCAGATCACCTGAGGTCAGGAGTTCGAGACCAC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAAGGAAATCCATCAAGTaGTTTTGGGGATCCACTTTG +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPRKSIK*FWGSTL
Trigger: CAAAGTGGATCCCCAAAATCACTTGATGGATTTCCT...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCCTGGTCTCGAACTCCTaGCCTTGTGATCTACCTGCC +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISLVSNS*PCDLPA
Trigger: GGCAGGTAGATCACAAGGTCAGGAGTTCGAGACCAG...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGCTGGTCTCAAACTCTaGACTCAAGAGGCCCACCCA +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRAGLKL*TQEAHP
Trigger: TGGGTGGGCCTCTTGAGTCCAGAGTTTGAGACCAGC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGTGGAGTGCAGTGGTGTaGTCTCTGCTCACTGTAACC +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRWSAVV*SLLTVT
Trigger: GGTTACAGTGAGCAGAGATCACACCACTGCACTCCA...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCAGGCGCCTGCCACCGTaGCTGGCTGATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISRRLPP*LADFCI
Trigger: AATACAAAAATCAGCCAGGCACGGTGGCAGGCGCCT...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 90 bp TTTCTTCACTGTGGCAAGTTTGTCCTCCTCTGTCCAAAGCAACAATaGAACCAACAGGCCCTTCTAATCTTATGCCAGCAACACAATGGG +
Preference number: 2 (lower is better)
Translates to: FLHCGKFVLLCPKQQ*NQQALLILCQQHNG
Trigger: CCCATTGTGTTGCTGGCATAAGATTAGAAGGGCCTGTTGGTTCAATTGTTGCTTTGGACAGAGGAGGACAAACTTGCCACAGTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTTGAATGAGGATGGCTaGCTCCTAGGCTCCAAAGGT +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISLNEDG*LLGSKG
Trigger: ACCTTTGGAGCCTAGGAGTCAGCCATCCTCATTCAA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCAGAGTGCCTTGGGCATaGGCTGTAGAATTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISRVPWA*AVEFGR
Trigger: CCTTCCAAATTCTACAGCGCATGCCCAAGGCACTCT...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGCTTTGTAGAGCCTCATaGACCAGCACTGCCACTAAG +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRLCRAS*TSTATK
Trigger: CTTAGTGGCAGTGCTGGTCCATGAGGCTCTACAAAG...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGCTGACCTATAAAATGTaGCAGCCCCAGGAGAACCAT +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRLTYKM*QPQENH
Trigger: ATGGTTCTCCTGGGGCTGTCACATTTTATAGGTCAG...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGGGAATAGAGTATCTTaGGCCATTGATGCTGGACCT +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISGNRVS*AIDAGP
Trigger: AGGTCCAGCATCAATGGCTCAAGATACTCTATTCCC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGACAGTTGGTATTTGCTaGTGGAGAACCACTTCTCGG +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRTVGIC*WRTTSR
Trigger: CCGAGAAGTGGTTCTCCATCAGCAAATACCAACTGT...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGGAAGTTTGCAAAGGTaGAGGTCTTCCCCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISGSLQR*RSSPRK
Trigger: TTTTCTTGGGGAAGACCTTCACCTTTGCAAACTTCC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTCTTCTCTAGGTTATTaGCACAGACCCACTTCCAGT +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISSSLGY*HRPTSS
Trigger: ACTGGAAGTGGGTCTGTGCCAATAACCTAGAGAAGA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGTGGGTTCACACACATaGTCCAATCTCAAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRVGSHT*SNLKKR
Trigger: TCTTTTCTTGAGATTGGATCATGTGTGTGAACCCAC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTACCTAACTGCAGGCTaGAAGAAAAGGAACAAGGTT +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISYLTAG*KKRNKV
Trigger: AACCTTGTTCCTTTTCTTTCAGCCTGCAGTTAGGTA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR GCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTTCAATCTTGGCTCACTaGAACCTCTGCCGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPSILAH*NLCRWV
Trigger: AACCCAGCGGCAGAGGTTGCAGTGAGCCAAGATTGA...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 90 bp ACCATAGTTTACTTAGAAATCAGCAAGGAAATCCATCAAGTGATTTaGGGGATCCACTTTGAGTGGGAAGCCATGAGAAATGCCCAAACA +
Preference number: 2 (lower is better)
Translates to: TIVYLEISKEIHQVI*GIHFEWEAMRNAQT
Trigger: TGTTTGGGCATTTCTCATGGCTTCCCACTCAAAGTGGATCCCCAAAATCACTTGATGGATTTCCTTGCTGATTTCTAAGTAAACTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTCAAGGTTCTTAGATTaGATCACTTTGTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISSRFLD*ITLSAL
Trigger: CAGAGCAGACAAAGTGATTCAATCTAAGAACCTTGA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGATGCGCTGTAGAATTTaGAAGGCATTTGTTTCAGAC +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRMRCRI*KAFVSD
Trigger: GTCTGAAACAAATGCCTTCCAAATTCTACAGCGCAT...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCCACATAACATTACCCTaGCACAATGAAATTTGTAGA +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISHITLP*HNEICR
Trigger: TCTACAAATTTCATTGTGGCAGGGTAATGTTATGTG...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGGTTTACATACTCTTTaGAAGCTCAAAAAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: SVMMETVYICAIWYGAISGLHTL*KLKKFK
Trigger: CTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGTGCAAATTGAAATGTTaGATACATTCATCTCGTTGC +
Preference number: 2 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRCKLKC*IHSSRC
Trigger: GCAACGAGATGAATGTATCCAACATTTCAATTTGCA...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 90 bp GCCATTCCTATTAACTTAATTACACCTGCCCACAACTTAATTTACTaGCCTTTGTTACTACAGTTTGAACTCCAGCTACATTTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: AIPINLITPAHNLIY*PLLLQFELQLHFSK
Trigger: CTTAGAAAAATGTAGCTGGAGTTCAAACTGTAGTAACAAAGGCAAGTAAATTAAGTTGTGGGCAGGTGTAATTAAGTTAATAGGAATGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp ACTGCAACCTCTGCCGCTGGGTTCAAGCAGTTCTCCTaGCTCAGCCTCCCGAGTAGGTGGACTACAGGCGCC +
Preference number: 3 (lower is better)
Translates to: TATSAAGFKQFS*LSLPSRWTTGA
Trigger: GGCGCCTGTAGTCCACCTACTCGGGAGGCTGAGGCAGGAGAACTGCTTGAACCCAGCGGCAGAGGTTGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp TCTCAGCTCACGGCAGCCTTTGCCCCCAGATGCAAGTaGTCCTGCCACCTCAGCCTCCTGAGTAGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: SQLTAAFAPRCK*SCHLSLLSRWH
Trigger: GTGCCACCTACTCAGGAGGCTGAGGTGGCAGGATCACTTGCATCTGGGGGCAAAGGCTGCCGTGAGCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp ACCAGCACTGCCACTAAGGCTGCGCTCCTGCCCCTTTaGCCCTCTTCAGGGAATCCTGCTATCCTAAGGGCC +
Preference number: 3 (lower is better)
Translates to: TSTATKAALLPL*PSSGNPAILRA
Trigger: GGCCCTTAGGATAGCAGGATTCCCTGAAGAGGGCCAAAGGGGCAGGAGCGCAGCCTTAGTGGCAGTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp CACAGCTCACTGCAGCTTCGACCTCCTGGGCACAGGTaGTCTCACTTCAGCTTCCCGAGTAGCTGGGACCAC +
Preference number: 3 (lower is better)
Translates to: HSSLQLRPPGHR*SHFSFPSSWDH
Trigger: GTGGTCCCAGCTACTCGGGAAGCTGAAGTGAGATCACCTGTGCCCAGGAGGTCGAAGCTGCAGTGAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp GGTAGAGCTGGGGTCGCCCAGGCTGGTCTCAAACTCTaGACTCAAGAGGCCCACCCATTTAGGCCTCCCAAA +
Preference number: 3 (lower is better)
Translates to: GRAGVAQAGLKL*TQEAHPFRPPK
Trigger: TTTGGGAGGCCTAAATGGGTGGGCCTCTTGAGTCCAGAGTTTGAGACCAGCCTGGGCGACCCCAGCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp TGCGCTCCTGCCCCTTTGGCCCTCTTCAGGGAATCCTaGTATCCTAAGGGCCGTGCACACTGTAGGGAACAA +
Preference number: 3 (lower is better)
Translates to: CAPAPLALFRES*YPKGRAHCREQ
Trigger: TTGTTCCCTACAGTGTGCACGGCCCTTAGGATAGCAGGATTCCCTGAAGAGGGCCAAAGGGGCAGGAGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp AGGAATGAGCACTGTTTGAACCCAGGAGACGGAGGTTaGAGTGAGCAGAGCCGAGATCGCACCACTGCACTC +
Preference number: 3 (lower is better)
Translates to: RNEHCLNPGDGG*SEQSRDRTTAL
Trigger: GAGTGCAGTGGTGCGATCTCGGCTCTGCTCACTGCAACCTCCGTCTCCTGGGTTCAAACAGTGCTCATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp TCTTCTCGGGGTGTAGATGAGTGGGGGCACTTACATTaGCCGTTGGAGGAGACTCTGCCTTCTGCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: SSRGVDEWGHLH*PLEETLPSAQP
Trigger: TGGCTGAGCAGAAGGCAGAGTCTCCTCCAACGGGCAATGTAAGTGCCCCCACTCATCTACACCCCGAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp TGCCTCAGCCTCCCGAGTAGGTGGACTACAGGCGCCTaGCACCGTGCCTGGCTGATTTTTGTATTTTCAATA +
Preference number: 3 (lower is better)
Translates to: CLSLPSRWTTGA*HRAWLIFVFSI
Trigger: TATTGAAAATACAAAAATCAGCCAGGCACGGTGGCAGGCGCCTGTAGTCCACCTACTCGGGAGGCTGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp AGTTCTGGATGTGAGGAAGAGACTGAAGGATCAAAGTaGGGCAATGGGGGTTCAACATGGGGCAGGGATCAG +
Preference number: 3 (lower is better)
Translates to: SSGCEEETEGSK*GNGGSTWGRDQ
Trigger: CTGATCCCTGCCCCATGTTGAACCCCCATTGCCCCACTTTGATCCTTCAGTCTCTTCCTCACATCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp ATACAGTTTGATGGCTCTTCTCGGGGTGTAGATGAGTaGGGGCACTTACATTGCCCGTTGGAGGAGACTCTG +
Preference number: 3 (lower is better)
Translates to: IQFDGSSRGVDE*GHLHCPLEETL
Trigger: CAGAGTCTCCTCCAACGGGCAATGTAAGTGCCCCCACTCATCTACACCCCGAGAAGAGCCATCAAACTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGTGCGCTCCTGCCCCTTaGGCCCTCTTCAGGGAATCC +
Preference number: 3 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRCAPAP*ALFRES
Trigger: GGATTCCCTGAAGAGGGCCAAAGGGGCAGGAGCGCA...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp CATGCCTGTAATCTCAGCTACTTGGGAGTTGAGGAATaGGCACTGTTTGAACCCAGGAGACGGAGGTTGCAG +
Preference number: 3 (lower is better)
Translates to: HACNLSYLGVEE*ALFEPRRRRLQ
Trigger: CTGCAACCTCCGTCTCCTGGGTTCAAACAGTGCTCATTCCTCAACTCCCAAGTAGCTGAGATTACAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp TGTAGGGAGGGGAGCATTCTGCTCTGCCTAGTCATTTaGAACACTGGCTCCTTCTATCTTGTGTGGTGCCAT +
Preference number: 3 (lower is better)
Translates to: CREGSILLCLVI*NTGSFYLVWCH
Trigger: ATGGCACCACACAAGATAGAAGGAGCCAGTGTTCCAAATGACTAGGCAGAGCAGAATGCTCCCCTCCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp GAGTATTCTATTCTCCTGCCCACACTGATGGGCACATaGACCAAGAAAGACAAAAGGTCTCCTGGGGGTGTG +
Preference number: 3 (lower is better)
Translates to: EYSILLPTLMGT*TKKDKRSPGGV
Trigger: CACACCCCCAGGAGACCTTTTGTCTTTCTTGGTTCATGTGCCCATCAGTGTGGGCAGGAGAATAGAATACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp GGCCAGGTTCTTGTGCAATTTGTGAAACCTTTGGTTTaGAGAGTTGTTAGCGTAGTGGCTCGGCTCATCAGC +
Preference number: 3 (lower is better)
Translates to: GQVLVQFVKPLV*RVVSVVARLIS
Trigger: GCTGATGAGCCGAGCCACTACGCTAACAACTCTGCAAACCAAAGGTTTCACAAATTGCACAAGAACCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp GGCTCCTTCTATCTTGTGTGGTGCCATCTTCAACCTTaGAGGGTGCATGTTGGAGGGGAAGAGATAGAATAT +
Preference number: 3 (lower is better)
Translates to: GSFYLVWCHLQP*RVHVGGEEIEY
Trigger: ATATTCTATCTCTTCCCCTCCAACATGCACCCTTCAAGGTTGAAGATGGCACCACACAAGATAGAAGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp GGAGTTCTCTCACACGGTCTGGCTAGCACAGTAATTTaGTTGTGGTTAAAAGCCTTTGTGCTCAGTACTGAG +
Preference number: 3 (lower is better)
Translates to: GVLSHGLASTVI*LWLKAFVLSTE
Trigger: CTCAGTACTGAGCACAAAGGCTTTTAACCACAAGCAAATTACTGTGCTAGCCAGACCGTGTGAGAGAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp TCTCTTGTTGAGTCACAACAGCTGTTCCCCATGCTCTaGGTGGTAACATTCCACATGGTACTCCATAAAAGC +
Preference number: 3 (lower is better)
Translates to: SLVESQQLFPML*VVTFHMVLHKS
Trigger: GCTTTTATGGAGTACCATGTGGAATGTTACCACGCAGAGCATGGGGAACAGCTGTTGTGACTCAACAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp AAGCAACAATTGAACCAACAGGCCCTTCTAATCTTATaGCAGCAACACAATGGGATCGAGGCCAGGTTCTTG +
Preference number: 3 (lower is better)
Translates to: KQQLNQQALLIL*QQHNGIEARFL
Trigger: CAAGAACCTGGCCTCGATCCCATTGTGTTGCTGGCATAAGATTAGAAGGGCCTGTTGGTTCAATTGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp CCAACAGGCCCTTCTAATCTTATGCCAGCAACACAATaGGATCGAGGCCAGGTTCTTGTGCAATTTGTGAAA +
Preference number: 3 (lower is better)
Translates to: PTGPSNLMPATQ*DRGQVLVQFVK
Trigger: TTTCACAAATTGCACAAGAACCTGGCCTCGATCCCATTGTGTTGCTGGCATAAGATTAGAAGGGCCTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTGTAACCTCCACCTCTaGGGCTCAAGCAATTCTCCT +
Preference number: 3 (lower is better)
Translates to: SVMMETVYICAIWYGAISCNLHL*GSSNSP
Trigger: AGGAGAATTGCTTGAGCCCAAGAGGTGGAGGTTACA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGCTCTTCTCTAGGTTATaGGCACAGACCCACTTCCAG +
Preference number: 3 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRLFSRL*AQTHFQ
Trigger: CTGGAAGTGGGTCTGTGCCAATAACCTAGAGAAGAG...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp CAAGGAAATCCATCAAGTGATTTTGGGGATCCACTTTaGGTGGGAAGCCATGAGAAATGCCCAAACAAGCCA +
Preference number: 3 (lower is better)
Translates to: QGNPSSDFGDPL*VGSHEKCPNKP
Trigger: TGGCTTGTTTGGGCATTTCTCATGGCTTCCCACTCAAAGTGGATCCCCAAAATCACTTGATGGATTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp CTGTGTCCGGCCTCTCTTGGTGATTTTGACTGGAAATaGTGTGGGTTCACACACATGATCCAATCTCAAGAA +
Preference number: 3 (lower is better)
Translates to: LCPASLGDFDWK*CGFTHMIQSQE
Trigger: TTCTTGAGATTGGATCATGTGTGTGAACCCACATCATTTCCAGTCAAAATCACCAAGAGAGGCCGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp AAGTGTGGACAGAGTATTCTATTCTCCTGCCCACACTaGTGGGCACATGAACCAAGAAAGACAAAAGGTCTC +
Preference number: 3 (lower is better)
Translates to: KCGQSILFSCPH*WAHEPRKTKGL
Trigger: GAGACCTTTTGTCTTTCTTGGTTCATGTGCCCATCAGTGTGGGCAGGAGAATAGAATACTCTGTCCACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp TCTTGTCATGCTTCAGTTGTTTCTGTGGCTCTCCTCTaGACTCTCTCCAAATTCTCCTGCTCAGTTTTAGCA +
Preference number: 3 (lower is better)
Translates to: SCHASVVSVALL*TLSKFSCSVLA
Trigger: TGCTAAAACTGAGCAGGAGAATTTGGAGAGAGTCCAGAGGAGAGCCACAGAAACAACTGAAGCATGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCAGAGCCTTGATTTTCTaGCTGACCACTCGCAGCAAT +
Preference number: 3 (lower is better)
Translates to: SVMMETVYICAIWYGAISRALIF*LTTRSN
Trigger: ATTGCTGCGAGTGGTCAGCAAGAAAATCAAGGCTCT...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp ACTGCAATTATTCTTGTCATGCTTCAGTTGTTTCTGTaGCTCTCCTCTGGACTCTCTCCAAATTCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: TAIILVMLQLFL*LSSGLSPNSPA
Trigger: AGCAGGAGAATTTGGAGAGAGTCCAGAGGAGAGCCACAGAAACAACTGAAGCATGACAAGAATAATTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp CTTCTGATCCTTCCAGATAAGATCGGTAACCTTTACTaGATGGCTCATAGCATCTGGGTTATTACCTACCAA +
Preference number: 3 (lower is better)
Translates to: LLILPDKIGNLY*MAHSIWVITYQ
Trigger: TTGGTAGGTAATAACCCAGATGCTATGAGCCATCCAGTAAAGGTTACCGATCTTATCTGGAAGGATCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp GATGGGCACATGAACCAAGAAAGACAAAAGGTCTCCTaGGGGTGTGTGTATATATATGTGTGTGTGTATACA +
Preference number: 3 (lower is better)
Translates to: DGHMNQERQKVS*GCVYIYVCVYT
Trigger: TGTATACACACACACATATATATACACACACCCCCAGGAGACCTTTTGTCTTTCTTGGTTCATGTGCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTCCAAACACCCATCCCTaGCTTTGTAGAGCCTCATGG +
Preference number: 3 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPPNTHP*LCRASW
Trigger: CCATGAGGCTCTACAAAGCAAGGGATGGGTGTTTGG...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGAGGACAGAAAACAGTaGGTATTTGCTGATGGAGAA +
Preference number: 3 (lower is better)
Translates to: HNEICRGLGSVSNTSSIREDRKQ*VFADGE
Trigger: TTCTCCATCAGCAAATACCAACTGTTTTCTGTCCTC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp GTGATTTTGACTGGAAATGATGTGGGTTCACACACATaGTCCAATCTCAAGAAAAGACAGTGTAGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: VILTGNDVGSHT*SNLKKRQCRGK
Trigger: CTTCCCTCTACACTGTCTTTTCTTGAGATTGGATCATGTGTGTGAACCCACATCATTTCCAGTCAAAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CCA 72 bp AAGATCGGTAACCTTTACTGGATGGCTCATAGCATCTaGGTTATTACCTACCAAGAACAGTGTTTTATGCAG +
Preference number: 3 (lower is better)
Translates to: KIGNLYWMAHSI*VITYQEQCFMQ
Trigger: CTGCATAAAACACTGTTCTTGGTAGGTAATAACCCAGATGCTATGAGCCATCCAGTAAAGGTTACCGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGGGTTTACATACTCTTaGGAAGCTCAAAAAGTTCAA +
Preference number: 3 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRGFTYS*EAQKVQ
Trigger: TTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp AGAATTTTCTGTGATGATGGAAACAGTCTACATCTGTaGTATCTGGTATGGTGCTATAAGCCACATGTAGCT +
Preference number: 3 (lower is better)
Translates to: RIFCDDGNSLHL*YLVWCYKPHVA
Trigger: AGCTACATGTGGCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGAAAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTGAGTATCTTGAGCCATaGATGCTGGACCTACATACT +
Preference number: 3 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPEYLEP*MLDLHT
Trigger: AGTATGTAGGTCCAGCATCAATGGCTCAAGATACTC...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR-3UTR CAA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTATCCATCAAGTGATTTaGGGGATCCACTTTGAGTGG +
Preference number: 3 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPIHQVI*GIHFEW
Trigger: CCACTCAAAGTGGATCCCCAAAATCACTTGATGGAT...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR TCA 72 bp ATAGATAATTGGTTAAATTATGGGACATCCATCTTCTaGTCCTTCCAGATAAGATCGGTAACCTTTACTGGA +
Preference number: 3 (lower is better)
Translates to: IDNWLNYGTSIF*SFQIRSVTFTG
Trigger: TCCAGTAAAGGTTACCGATCTTATCTGGAAGGATCAGAAGATGGATGTCCCATAATTTAACCAATTATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR GCA 72 bp GCATCTGGGTTATTACCTACCAAGAACAGTGTTTTATaGAGTTATTTAATATCTGTCTCCTTACTAGACTGT +
Preference number: 3 (lower is better)
Translates to: ASGLLPTKNSVL*SYLISVSLLDC
Trigger: ACAGTCTAGTAAGGAGACAGATATTAAATAACTGCATAAAACACTGTTCTTGGTAGGTAATAACCCAGATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATGGGGTCGCCCAGGCTaGTCTCAAACTCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPWGRPG*SQTLDS
Trigger: TGAGTCCAGAGTTTGAGACCAGCCTGGGCGACCCCA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAAATCCCAAAGCTTTGTaGGGTGGAGGCGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPNPKAL*GGGGQI
Trigger: GATCTGCCCGCCTCCACCTCACAAAGCTTTGGGATT...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 72 bp AGCAAGAGCCTTTTCCTCCTCCCAAACACCCATCCCTaGCTTTGTAGAGCCTCATGGACCAGCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: SKSLFLLPNTHP*LCRASWTSTAT
Trigger: AGTGGCAGTGCTGGTCCATGAGGCTCTACAAAGCAAGGGATGGGTGTTTGGGAGGAGGAAAAGGCTCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATCAGTGGTGCTGAGCTaGCTCACAGAGCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPSVVLS*LTEPNF
Trigger: GAAATTGGGCTCTGTGAGTCAGCTCAGCACCACTGA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATTCTCCTGCCCACACTaGTGGGCACATGAACCAAGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPFSCPH*WAHEPR
Trigger: TCTTGGTTCATGTGCCCATCAGTGTGGGCAGGAGAA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAAGTTGTGGCCAACACTaGTTACAGGTGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPSCGQH*LQVSTG
Trigger: CCCAGTGCTCACCTGTAATCAGTGTTGGCCACAACT...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATCTCAGCATACGGACTaGAGCCATCTTACCCCGGAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPSQHTD*SHLTPE
Trigger: TTCCGGGGTAAGATGGCTGCAGTCCGTATGCTGAGA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGCCCCCAGATGCAAGTaGTCCTGCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRAPRCK*SCHLSL
Trigger: GAGGCTGAGGTGGCAGGATCACTTGCATCTGGGGGC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCACAGTGTGAATCCCTTTaGCTGTTCCATCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPQCESL*LFHLSP
Trigger: TGGGGAAAGATGGAACAGTCAAAGGGATTCACACTG...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAGTGACACCATTCTGTTaGAACTGGAGTATACTGCAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPVTPFC*NWSILH
Trigger: GTGCAGTATACTCCAGTTTCAACAGAATGGTGTCAC...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAAGGTATCTTCAGGGCTaGAGACATAGTCTTGACCAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPRYLQG*RHSLDH
Trigger: ATGGTCAAGACTATGTCTGCAGCCCTGAAGATACCT...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGCGCTCCTGCCCCTTTaGCCCTCTTCAGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVALLPL*PSSGNP
Trigger: AGGATTCCCTGAAGAGGGCCAAAGGGGCAGGAGCGC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTAGCTTCCCGAGTAGCTaGGACCACAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVSFPSS*DHRRAP
Trigger: TGGTGCACGCCTGTGGTCCCAGCTACTCGGGAAGCT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 72 bp GATCGAGGCCAGGTTCTTGTGCAATTTGTGAAACCTTaGGTTTGCAGAGTTGTTAGCGTAGTGGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: DRGQVLVQFVKP*VCRVVSVVARL
Trigger: GAGCCGAGCCACTACGCTAACAACTCTGCAAACCAAAGGTTTCACAAATTGCACAAGAACCTGGCCTCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAAACTCTGTGATCAGCTaGCCAGCTCACATTCATTAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPNSVIS*PAHIHY
Trigger: ATAATGAATGTGAGCTGGTCAGCTGATCACAGAGTT...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGTGGTCTCGAACTCCTaGCCTCAGGTGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVVVSNS*PQVIWP
Trigger: TGGCCAGATCACCTGAGGTCAGGAGTTCGAGACCAC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATCGGCTCATCAGCTCTaGGCATTTGAATATCTAATG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPSAHQL*AFEYLM
Trigger: CATTAGATATTCAAATGCTCAGAGCTGATGAGCCGA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCCCAGGAGACGGAGGTTaGAGTGAGCAGAGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISPGDGG*SEQSRD
Trigger: ATCTCGGCTCTGCTCACTGCAACCTCCGTCTCCTGG...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCACTGTGCTATCTGGTATaGTGCTATAAGCCACATGTA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPLCYLV*CYKPHV
Trigger: TACATGTGGCTTATAGCACCATACCAGATAGCACAG...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CTAGTCACATTACTGCCAATGTTACCTTCAGGCCATGTGGAACTAGGTCACCCTTCTGCCATCTTTTCCTaGGCCAACAACTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LVTLLPMLPSGHVELGHPSAIFS*ANNFTQ
Trigger: CTGAGTGAAGTTGTTGGCTCAGGAAAAGATGGCAGA...AGGGTGACCTAGTTCCACATGGCCTGAAGGTAACATTGGCAGTAATGTGACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR TCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAGGGAATGGCCTTAATTaGTCCAAGGGCCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEGNGLN*SKGPNG
Trigger: GCCATTGGGGCCCTTGGATCAATTAAGGCCATTCCC...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAGTTATTTGCTTATTATaGCAAGCCTGGGAAGACGTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPVICLL*QAWEDV
Trigger: AACGTCTTCCCAGGCTTGTCATAATAAGCAAATAAC...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAGCTTCCCCGCATTCCTaGTCCAGGTTCTCAGCATAC +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEASPHS*SRFSAY
Trigger: GTATGCTGAGAACCTGGAGCAGGAATGCGGGGAAGC...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTTCGCCCAGGCTGGAGTaGAATAGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVSPRLE*NSTISA
Trigger: AGCTGAGATCGTGCTATTGCACTCCAGCCTGGGCGA...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681617.1
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTTGGGGGCACTTACATTaGCCGTTGGAGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVWGHLH*PLEETL
Trigger: CAGAGTCTCCTCCAACGGGCAATGTAAGTGCCCCCA...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTAGCCTCCTGAGTAGGTaGCACACAGGTGCATGTCAC +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVSLLSR*HTGACH
Trigger: GTGACATGCACCTGTGTGCCACCTACTCAGGAGGCT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGGAATGAGCACTGTTTaGACCCAGGAGACGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRGMSTV*TQETEV
Trigger: AACCTCCGTCTCCTGGGTTCAAACAGTGCTCATTCC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGTTCTCGGGGTGTAGATaGGTGGGGGCACTTACATTG +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRFSGCR*VGALTL
Trigger: CAATGTAAGTGCCCCCACTCATCTACACCCCGAGAA...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGCGAACTGCAGGAGTTaGCAGTGTTTTTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISANCRS*QCFSAL
Trigger: AAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATCAATCTTGGCTCACTaGAACCTCTGCCGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQESILAH*NLCRWV
Trigger: AACCCAGCGGCAGAGGTTGCAGTGAGCCAAGATTGA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCCTCTTCAGGGAATCCTaGTATCCTAAGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISLFRES*YPKGRA
Trigger: TGCACGGCCCTTAGGATAGCAGGATTCCCTGAAGAG...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCACTCCCTACTCTACTaGCACCTCAGCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVHSLLY*HLSFLS
Trigger: AGAGAGGAAGCTGAGGTGGCAGTAGAGTAGGGAGTG...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGCTCTATCACCAGGCTaGAGTGCAGTGGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISALSPG*SAVAQS
Trigger: AGATTGAGCCACTGCACTCCAGCCTGGTGATAGAGC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACGGGGTGTAGATGAGTaGGGGCACTTACATTGCCCG +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLERGVDE*GHLHCP
Trigger: CGGGCAATGTAAGTGCCCCCACTCATCTACACCCCG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 72 bp TGGCTCCTTCTATCTTGTGTGGTGCCATCTTCAACCTaGAAGGGTGCATGTTGGAGGGGAAGAGATAGAATA +
Preference number: 4 (lower is better)
Translates to: WLLLSCVVPSST*KGACWRGRDRI
Trigger: TATTCTATCTCTTCCCCTCCAACATGCACCCTTCAAGGTTGAAGATGGCACCACACAAGATAGAAGGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTCTGAGAGCTTGAACTaGACAACCTGTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISSESLN*TTCPRR
Trigger: TCTCCGTGGACAGGTTGTTCAGTTCAAGCTCTCAGA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CTAGTCACATTACTGCCAATGTTACCTTCAGGCCATGTGGAACTAGGTCACCCTTGTGTATGTTCATCATaGGACACTGCAGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LVTLLPMLPSGHVELGHPCVCSS*DTAGVS
Trigger: TGAAACTCCTGCAGTGTCTCATGATGAACATACACA...AGGGTGACCTAGTTCCACATGGCCTGAAGGTAACATTGGCAGTAATGTGACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGGAATGGCCTTAATTaGTCCAAGGGCCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGNGLN*SKGPNG
Trigger: GCCATTGGGGCCCTTGGATCAATTAAGGCCATTCCC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCTGGTCTCGAACTCCTaGCCTTGTGATCTACCTGCC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLLVSNS*PCDLPA
Trigger: GGCAGGTAGATCACAAGGTCAGGAGTTCGAGACCAG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAGACGGAGGTTGCAGTaGGCAGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGRRRLQ*AEPRSH
Trigger: GTGCGATCTCGGCTCTGCTCACTGCAACCTCCGTCT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTCGCCCAGGCTGGAGTaGAATAGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLSPRLE*NSTISA
Trigger: AGCTGAGATCGTGCTATTGCACTCCAGCCTGGGCGA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681617.1
CDS-3UTR GCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTCTAAGGCTGCGCTCCTaGCCCTTTGGCCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPLRLRS*PFGPLQ
Trigger: CTGAAGAGGGCCAAAGGGGCAGGAGCGCAGCCTTAG...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGCGTTGGAGGAGACTCTaGCTTCTGCTCAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRRWRRL*LLLSQK
Trigger: TTTTTGGCTGAGCAGAAGGCAGAGTCTCCTCCAACG...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CTAGTCACATTACTGCCAATGTTACCTTCAGGCCATGTGGAACTAGGTCACCCTGTCTTTTGGCTTTGGTaGAGGTGGCATAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: LVTLLPMLPSGHVELGHPVFWLW*RWHNFN
Trigger: GTTGAAATTATGCCACCTCCACCAAAGCCAAAAGAC...AGGGTGACCTAGTTCCACATGGCCTGAAGGTAACATTGGCAGTAATGTGACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCCATGTTGGCCAGGCTaGTCTCAAACTTCTAACCTC +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVPCWPG*SQTSNL
Trigger: GAGGTTAGAAGTTTGAGACCAGCCTGGCCAACATGG...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681617.1
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACTCTGTCGCCCAGGCTaGAGTGCAATAGCACGATCT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLELCRPG*SAIARS
Trigger: AGATCGTGCTATTGCACTCCAGCCTGGGCGACAGAG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681617.1
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAGTAACCTCCACCTCTTaGGCTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEVTSTS*AQAILL
Trigger: CAGGAGAATTGCTTGAGCCCAAGAGGTGGAGGTTAC...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGGGATCCACTTTGAGTaGGAAGCCATGAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRGIHFE*EAMRNA
Trigger: GGCATTTCTCATGGCTTCCCACTCAAAGTGGATCCC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATCTGGGTGGGAGTTGTaGCCAACACTGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQESGWEL*PTLITG
Trigger: ACCTGTAATCAGTGTTGGCCACAACTCCCACCCAGA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATTTAGCAAGCTGGCCTaGAGTTCTCTCACACGGTCT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEFSKLA*SSLTRS
Trigger: AGACCGTGTGAGAGAACTCCAGGCCAGCTTGCTAAA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGTCTGTGGCTCTCCTCTaGACTCTCTCCAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRSVALL*TLSKFS
Trigger: GGAGAATTTGGAGAGAGTCCAGAGGAGAGCCACAGA...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAATGCCAGCAACACAATaGGATCGAGGCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEMPATQ*DRGQVL
Trigger: AAGAACCTGGCCTCGATCCCATTGTGTTGCTGGCAT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 72 bp GAAGAAAAGACCCGAACAGGTACTGTAAAGAGTGCCTaGGGCATGCGCTGTAGAATTTGGAAGGCATTTGTT +
Preference number: 4 (lower is better)
Translates to: EEKTRTGTVKSA*GMRCRIWKAFV
Trigger: AACAAATGCCTTCCAAATTCTACAGCGCATGCCCAAGGCACTCTTTACAGTACCTGTTCGGGTCTTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 72 bp GTTCTCTCACACGGTCTGGCTAGCACAGTAATTTGCTaGTGGTTAAAAGCCTTTGTGCTCAGTACTGAGACT +
Preference number: 4 (lower is better)
Translates to: VLSHGLASTVIC*WLKAFVLSTET
Trigger: AGTCTCAGTACTGAGCACAAAGGCTTTTAACCACAAGCAAATTACTGTGCTAGCCAGACCGTGTGAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGCCCTTCTCCAATGTCTaGGAGCTTGAACTGAACAAC +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRPFSNV*ELELNN
Trigger: GTTGTTCAGTTCAAGCTCTCAGACATTGGAGAAGGG...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTTCTGCCATCTTTTCCTaGGCCAACAACTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVSAIFS*ANNFTQ
Trigger: CTGAGTGAAGTTGTTGGCTCAGGAAAAGATGGCAGA...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATCTGCCATCTTTTCCTaGGCCAACAACTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQESAIFS*ANNFTQ
Trigger: CTGAGTGAAGTTGTTGGCTCAGGAAAAGATGGCAGA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CTAGTCACATTACTGCCAATGTTACCTTCAGGCCATGTGGAACTAGGTCACCCTTTTTGTCTTTGCCTGTaGATACCGGAGGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LVTLLPMLPSGHVELGHPFCLCL*IPEVLI
Trigger: TATCAAAACCTCCGGTATTCACAGGCAAAGACAAAA...AGGGTGACCTAGTTCCACATGGCCTGAAGGTAACATTGGCAGTAATGTGACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTCAGTGGTGCTGAGCTaGCTCACAGAGCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLSVVLS*LTEPNF
Trigger: GAAATTGGGCTCTGTGAGTCAGCTCAGCACCACTGA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATCAGTGGTGCTGAGCTaGCTCACAGAGCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLESVVLS*LTEPNF
Trigger: GAAATTGGGCTCTGTGAGTCAGCTCAGCACCACTGA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCCATCAATAACTCTGTaGTCAGCTGACCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVPSITL*SADQLT
Trigger: TGTGAGCTGGTCAGCTGATCACAGAGTTATTGATGG...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTACAGTTGGTATTTGCTaGTGGAGAACCACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVTVGIC*WRTTSR
Trigger: CCGAGAAGTGGTTCTCCATCAGCAAATACCAACTGT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTGCCATCTTCAACCTTaGAGGGTGCATGTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLCHLQP*RVHVGG
Trigger: CCCTCCAACATGCACCCTTCAAGGTTGAAGATGGCA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATCTCAGCATACGGACTaGAGCCATCTTACCCCGGAA +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLESQHTD*SHLTPE
Trigger: TTCCGGGGTAAGATGGCTGCAGTCCGTATGCTGAGA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681780.1
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGCGAACTGCAGGAGTTaGCAGTGTTTTTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLANCRS*QCFSAL
Trigger: AAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCGAACTGCAGGAGTTaGCAGTGTTTTTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEANCRS*QCFSAL
Trigger: AAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTAGGCGCCTGCCACCGTaGCTGGCTGATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLRRLPP*LADFCI
Trigger: AATACAAAAATCAGCCAGGCACGGTGGCAGGCGCCT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCCAAACACCCATCCCTTaGTTTGTAGAGCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISQTPIP*FVEPHG
Trigger: TCCATGAGGCTCTACAAAGCAAGGGATGGGTGTTTG...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTAGGTGGCATTATCACTaGTTTGGCAAAGGTACCACC +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVRWHYH*FGKGTT
Trigger: GGTGGTACCTTTGCCAAACCAGTGATAATGCCACCT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAATGGGGGTTCAACATaGGGCAGGGATCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLENGGST*GRDQEE
Trigger: TTCCTCCTGATCCCTGCCCCATGTTGAACCCCCATT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATATTTAGGAGACATCTaGGTGGGAGTTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEYLGDI*VGVVAN
Trigger: GTTGGCCACAACTCCCACCCAGATGTCTCCTAAATA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCAAAGCTTTGTGAGGTaGAGGCGGGCAGATCACTTG +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLQSFVR*RRADHL
Trigger: CAAGTGATCTGCCCGCCTCCACCTCACAAAGCTTTG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATCTGAGAGCTTGAACTaGACAACCTGTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLESESLN*TTCPRR
Trigger: TCTCCGTGGACAGGTTGTTCAGTTCAAGCTCTCAGA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCTTGTCTCAGCTTCCTaGGTAGCTGGGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLLVSAS*VAGTIG
Trigger: ACCTATAGTCCCAGCTACTCAGGAAGCTGAGACAAG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCACACTGATGGGCACATaGACCAAGAAAGACAAAAGG +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISTLMGT*TKKDKR
Trigger: CCTTTTGTCTTTCTTGGTTCATGTGCCCATCAGTGT...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATTGAATGAGGATGGCTaGCTCCTAGGCTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLELNEDG*LLGSKG
Trigger: ACCTTTGGAGCCTAGGAGTCAGCCATCCTCATTCAA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGTCTGTCTGACTGTCTaGGATGTCACTGAGTCATTT +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVVCLTV*DVTESF
Trigger: AAATGACTCAGTGACATCTCAGACAGTCAGACAGAC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp AGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAAGAATGCAATTTTAGTACTGCTTCCCCGCATTCCTaGTCCAGGTTCTCAGCATAC +
Preference number: 4 (lower is better)
Translates to: SNPKEAACLTEKECNFSTASPHS*SRFSAY
Trigger: GTATGCTGAGAACCTGGAGCAGGAATGCGGGGAAGC...AGTACTAAAATTGCATTCTTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR GCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGCTTCCCCGCATTCCTaGTCCAGGTTCTCAGCATAC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGASPHS*SRFSAY
Trigger: GTATGCTGAGAACCTGGAGCAGGAATGCGGGGAAGC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp ATATTCTGGCAGTTTTCATCCACAGAAGCGTTAAGGATAGGAAACTGTAGTAATGCGAACTGCAGGAGTTaGCAGTGTTTTTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: IFWQFSSTEALRIGNCSNANCRS*QCFSAL
Trigger: AAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGC...ATTACTACAGTTTCCTATCCTTAACGCTTCTGTGGATGAAAACTGCCAGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR GCA 90 bp TGGCAGTTTTCATCCACAGAAGCGTTAAGGATAGGAAACTGTAGTAATCCCAAGAATATTGTTTTCCATTaGCAGACGGCGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: WQFSSTEALRIGNCSNPKNIVFH*QTANCR
Trigger: CCTGCAGTTCGCCGTCTGGCAATGGAAAACAATATT...CTTGGGATTACTACAGTTTCCTATCCTTAACGCTTCTGTGGATGAAAACTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR GCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGAATATTGTTTTCCATTaGCAGACGGCGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRNIVFH*QTANCR
Trigger: CCTGCAGTTCGCCGTCTGGCAATGGAAAACAATATT...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTAATATTGTTTTCCATTaGCAGACGGCGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVNIVFH*QTANCR
Trigger: CCTGCAGTTCGCCGTCTGGCAATGGAAAACAATATT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGGGACAATCAAACCCTaGTCAGTATCCATTGCTATC +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVGTIKP*SVSIAI
Trigger: GATAGCAATGGATACTGAGCAGGGTTTGATTGTCCC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAGAGTGCCTTGGGCATaGGCTGTAGAATTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLERVPWA*AVEFGR
Trigger: CCTTCCAAATTCTACAGCGCATGCCCAAGGCACTCT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAAACAGTCATGTCTTTTaGCTTTGGTGGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQENSHVF*LWWRWH
Trigger: ATGCCACCTCCACCAAAGCCAAAAGACATGACTGTT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTACAGAGCCCAATTTCTaGAGGCGGTTCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLTEPNF*RRFSSV
Trigger: CACTGAACTGAACCGCCTCCAGAAATTGGGCTCTGT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAAATGGCTACTTCAGGTaGCATTATCACTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQENGYFR*HYHWFG
Trigger: GCCAAACCAGTGATAATGCCACCTGAAGTAGCCATT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAATCCAAGGGCCCCAATaGCTACTTCAGGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEIQGPQ*LLQVAL
Trigger: TAATGCCACCTGAAGTAGCCATTGGGGCCCTTGGAT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTATCCAAGGGCCCCAATaGCTACTTCAGGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLIQGPQ*LLQVAL
Trigger: TAATGCCACCTGAAGTAGCCATTGGGGCCCTTGGAT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCTCTGTCGCCCAGGCTaGAGTGCAATAGCACGATCT +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGLCRPG*SAIARS
Trigger: AGATCGTGCTATTGCACTCCAGCCTGGGCGACAGAG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681617.1
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAACAGCTTTGAACTCCTaGGCTCAATTGATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQETALNS*AQLILL
Trigger: CAAGAGGATCAATTGAGCCCAGGAGTTCAAAGCTGT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCTTTGTAGAGCCTCATaGACCAGCACTGCCACTAAG +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLLCRAS*TSTATK
Trigger: CTTAGTGGCAGTGCTGGTCCATGAGGCTCTACAAAG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTGCTGGTCTCAAACTCTaGACTCAAGAGGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPAGLKL*TQEAHP
Trigger: TGGGTGGGCCTCTTGAGTCCAGAGTTTGAGACCAGC...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGTAATCTCAGCTACTTaGGAGTTGAGGAATGAGCAC +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVVISAT*ELRNEH
Trigger: GTGCTCATTCCTCAACTCCCAAGTAGCTGAGATTAC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTGCAGCTTCGACCTCCTaGGCACAGGTGATCTCACTT +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPAASTS*AQVISL
Trigger: AAGTGAGATCACCTGTGCCCAGGAGGTCGAAGCTGC...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp ATATTCTGGCAGTTTTCATCCACAGAAGCGTTAAGGATAGGAAACTGTAGTAATTCTGAGAGCTTGAACTaGACAACCTGTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: IFWQFSSTEALRIGNCSNSESLN*TTCPRR
Trigger: TCTCCGTGGACAGGTTGTTCAGTTCAAGCTCTCAGA...ATTACTACAGTTTCCTATCCTTAACGCTTCTGTGGATGAAAACTGCCAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTTGTGTATGTTCATCATaGGACACTGCAGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVCVCSS*DTAGVS
Trigger: TGAAACTCCTGCAGTGTCTCATGATGAACATACACA...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTCTGCCATCTTTTCCTaGGCCAACAACTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLSAIFS*ANNFTQ
Trigger: CTGAGTGAAGTTGTTGGCTCAGGAAAAGATGGCAGA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAAACTCTGTGATCAGCTaGCCAGCTCACATTCATTAT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQENSVIS*PAHIHY
Trigger: ATAATGAATGTGAGCTGGTCAGCTGATCACAGAGTT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCCATCAATAACTCTGTaGTCAGCTGACCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLPSITL*SADQLT
Trigger: TGTGAGCTGGTCAGCTGATCACAGAGTTATTGATGG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAACAAATTGGAGAAGCGTaGCATTGTAGCACCATCAAT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEQIGEA*HCSTIN
Trigger: ATTGATGGTGCTACAATGTCACGCTTCTCCAATTTG...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAATTGGAGAAGCGTaGCATTGTAGCACCATCAAT +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVQIGEA*HCSTIN
Trigger: ATTGATGGTGCTACAATGTCACGCTTCTCCAATTTG...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACTGACCTATAAAATGTaGCAGCCCCAGGAGAACCAT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLELTYKM*QPQENH
Trigger: ATGGTTCTCCTGGGGCTGTCACATTTTATAGGTCAG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTGGAGTGCAGTGGTGTaGTCTCTGCTCACTGTAACC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGWSAVV*SLLTVT
Trigger: GGTTACAGTGAGCAGAGATCACACCACTGCACTCCA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAGGATAGTGGCACAATaGCAGCTCACTACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLERIVAQ*QLTTAL
Trigger: CAAAGCTGTAGTGAGCTGTCATTGTGCCACTATCCT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGGAATAGAGTATCTTaGGCCATTGATGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGNRVS*AIDAGP
Trigger: AGGTCCAGCATCAATGGCTCAAGATACTCTATTCCC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAACTGTTAGTCCTGTTCTaGTTTATATTCATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQELLVLF*FIFIPA
Trigger: GGCAGGGATGAATATAAATCAGAACAGGACTAACAG...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCCCTTCGGTGTCAAATaGTACAGAAATGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLPFGVK*YRNGTG
Trigger: ACCAGTGCCATTTCTGTATCATTTGACACCGAAGGG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp AGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAAGAATGCAATTTTAGTACTTGCCAGACGGCGAACTaGAGGAGTTGCCAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SNPKEAACLTEKECNFSTCQTAN*RSCQCF
Trigger: AAAACACTGGCAACTCCTGCAGTTCGCCGTCTGGCA...AGTACTAAAATTGCATTCTTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR GCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTGCCAGACGGCGAACTaGAGGAGTTGCCAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGCQTAN*RSCQCF
Trigger: AAAACACTGGCAACTCCTGCAGTTCGCCGTCTGGCA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTCTGAGACAAAGTGTTaGTCTGCCACCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGSETKC*SATQAG
Trigger: TCCAGCCTGGGTGGCAGAGCAACACTTTGTCTCAGA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAGTGAAACCTTTGGTTTaGAGAGTTGTTAGCGTAGTG +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEVKPLV*RVVSVV
Trigger: CACTACGCTAACAACTCTGCAAACCAAAGGTTTCAC...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTTATTTGTATCTCCAGTaGCTAACACAGCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVYLYLQ*LTQHWY
Trigger: GTACCAGTGCTGTGTTAGGCACTGGAGATACAAATA...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681780.1
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAGGTGGCATTATCACTaGTTTGGCAAAGGTACCACC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLERWHYH*FGKGTT
Trigger: GGTGGTACCTTTGCCAAACCAGTGATAATGCCACCT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTACTGAAGGATCAAAGTaGGGCAATGGGGGTTCAACA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLTEGSK*GNGGST
Trigger: TGTTGAACCCCCATTGCCCCACTTTGATCCTTCAGT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGTTGAAGGGTGCATGTTaGAGGGGAAGAGATAGAATA +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRLKGAC*RGRDRI
Trigger: TATTCTATCTCTTCCCCTCCAACATGCACCCTTCAA...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GGGAGAGAGAGAACTCTTATTTATGCTGAGTTTAATTTCAAGTCTACATGTACCCCCTTCTCCAATGTCTaGGAGCTTGAACTGAACAAC +
Preference number: 4 (lower is better)
Translates to: GRERTLIYAEFNFKSTCTPFSNV*ELELNN
Trigger: GTTGTTCAGTTCAAGCTCTCAGACATTGGAGAAGGG...GGTACATGTAGACTTGAAATTAAACTCAGCATAAATAAGAGTTCTCTCTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR TCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTTTTGTCTTTGCCTGTaGATACCGGAGGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISFCLCL*IPEVLI
Trigger: TATCAAAACCTCCGGTATTCACAGGCAAAGACAAAA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATTTTGTCTTTGCCTGTaGATACCGGAGGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEFCLCL*IPEVLI
Trigger: TATCAAAACCTCCGGTATTCACAGGCAAAGACAAAA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCCAGTTTCAAGCCATTaGCACAAAAACATCAGCACC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLPVSSH*HKNIST
Trigger: GGTGCTGATGTTTTTGTGTCAATGGCTTGAAACTGG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACCAGTTTCAAGCCATTaGCACAAAAACATCAGCACC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEPVSSH*HKNIST
Trigger: GGTGCTGATGTTTTTGTGTCAATGGCTTGAAACTGG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGAAGTTTGCAAAGGTaGAGGTCTTCCCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGSLQR*RSSPRK
Trigger: TTTTCTTGGGGAAGACCTTCACCTTTGCAAACTTCC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGTCAAGGTTCTTAGATTaGATCACTTTGTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRSRFLD*ITLSAL
Trigger: CAGAGCAGACAAAGTGATTCAATCTAAGAACCTTGA...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTTGTCCTGTCTCTTGTTaGGTCACAACAGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPCPVSC*VTTAVP
Trigger: GGGAACAGCTGTTGTGACTCAACAAGAGACAGGACA...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTTTCTTGTGCAATTTGTaGAACCTTTGGTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVFLCNL*NLWFAE
Trigger: CTCTGCAAACCAAAGGTTTCACAAATTGCACAAGAA...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTAGGTATCTTCAGGGCTaGAGACATAGTCTTGACCAT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLRYLQG*RHSLDH
Trigger: ATGGTCAAGACTATGTCTGCAGCCCTGAAGATACCT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCTGCTCAGTATCCATTaGTATCCCAATGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVLLSIH*YPNVMR
Trigger: TCTCATAACATTGGGATAGCAATGGATACTGAGCAG...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAACTGCTCAGTATCCATTaGTATCCCAATGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQELLSIH*YPNVMR
Trigger: TCTCATAACATTGGGATAGCAATGGATACTGAGCAG...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGGACAATCAAACCCTaGTCAGTATCCATTGCTATC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGTIKP*SVSIAI
Trigger: GATAGCAATGGATACTGAGCAGGGTTTGATTGTCCC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGGGACAATCAAACCCTaGTCAGTATCCATTGCTATC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEGTIKP*SVSIAI
Trigger: GATAGCAATGGATACTGAGCAGGGTTTGATTGTCCC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATACATGAGGGAAGTTTaGAAAGGTGAAGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEYMREV*KGEGLP
Trigger: GGGAAGACCTTCACCTTTGCAAACTTCCCTCATGTA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATGGCTTTGGTGGAGGTaGCATAATTTCAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEWLWWR*HNFNFG
Trigger: CCCAAAGTTGAAATTATGCCACCTCCACCAAAGCCA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTAACAGTCATGTCTTTTaGCTTTGGTGGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLNSHVF*LWWRWH
Trigger: ATGCCACCTCCACCAAAGCCAAAAGACATGACTGTT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAACAGTCATGTCTTTTaGCTTTGGTGGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLENSHVF*LWWRWH
Trigger: ATGCCACCTCCACCAAAGCCAAAAGACATGACTGTT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGACAGAGCCCAATTTCTaGAGGCGGTTCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGTEPNF*RRFSSV
Trigger: CACTGAACTGAACCGCCTCCAGAAATTGGGCTCTGT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAATGGCTACTTCAGGTaGCATTATCACTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLENGYFR*HYHWFG
Trigger: GCCAAACCAGTGATAATGCCACCTGAAGTAGCCATT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTATGGCTCATAGCATCTaGGTTATTACCTACCAAGAA +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVMAHSI*VITYQE
Trigger: TTCTTGGTAGGTAATAACCCAGATGCTATGAGCCAT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATCTTCTCTAGGTTATTaGCACAGACCCACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLESSLGY*HRPTSS
Trigger: ACTGGAAGTGGGTCTGTGCCAATAACCTAGAGAAGA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTGTGTATGTTCATCATaGGACACTGCAGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLCVCSS*DTAGVS
Trigger: TGAAACTCCTGCAGTGTCTCATGATGAACATACACA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATGTGTATGTTCATCATaGGACACTGCAGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLECVCSS*DTAGVS
Trigger: TGAAACTCCTGCAGTGTCTCATGATGAACATACACA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAATTTCAACTTTGGGTaGAGGAGGCAATATAGCTCC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLENFNFG*RRQYSS
Trigger: GGAGCTATATTGCCTCCTTCACCCAAAGTTGAAATT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp TGGCAGTTTTCATCCACAGAAGCGTTAAGGATAGGAAACTGTAGTAATCCCAAGTTGACCATTGCTTTTTaGAAGCCTTTTATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: WQFSSTEALRIGNCSNPKLTIAF*KPFMGS
Trigger: AGAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAA...CTTGGGATTACTACAGTTTCCTATCCTTAACGCTTCTGTGGATGAAAACTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR TCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATTGACCATTGCTTTTTaGAAGCCTTTTATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQELTIAF*KPFMGS
Trigger: AGAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCCATCAATAACTCTGTaGTCAGCTGACCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGPSITL*SADQLT
Trigger: TGTGAGCTGGTCAGCTGATCACAGAGTTATTGATGG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCAAATTGGAGAAGCGTaGCATTGTAGCACCATCAAT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLQIGEA*HCSTIN
Trigger: ATTGATGGTGCTACAATGTCACGCTTCTCCAATTTG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTCTGACCTATAAAATGTaGCAGCCCCAGGAGAACCAT +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPLTYKM*QPQENH
Trigger: ATGGTTCTCCTGGGGCTGTCACATTTTATAGGTCAG...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTGGGACATCCATCTTCTaGTCCTTCCAGATAAGATCG +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPGTSIF*SFQIRS
Trigger: CGATCTTATCTGGAAGGATCAGAAGATGGATGTCCC...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTAGGAAATCCATCAAGTaGTTTTGGGGATCCACTTTG +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLRKSIK*FWGSTL
Trigger: CAAAGTGGATCCCCAAAATCACTTGATGGATTTCCT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGTGGGTTCACACACATaGTCCAATCTCAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLVGSHT*SNLKKR
Trigger: TCTTTTCTTGAGATTGGATCATGTGTGTGAACCCAC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTTCACTTTGTCTGCTCTaGGGTTATTTGCTTATTATG +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVSLCLL*GYLLIM
Trigger: CATAATAAGCAAATAACCTCAGAGCAGACAAAGTGA...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTACCTAACTGCAGGCTaGAAGAAAAGGAACAAGGTT +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLYLTAG*KKRNKV
Trigger: AACCTTGTTCCTTTTCTTTCAGCCTGCAGTTAGGTA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAAAGTTTAATACAGTTTaGTGGCTCTTCTCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEKFNTV*WLFSGC
Trigger: ACACCCCGAGAAGAGCCATCAAACTGTATTAAACTT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GGGAGAGAGAGAACTCTTATTTATGCTGAGTTTAATTTCAAGTCTACATGTACCAGGTATCTTCAGGGCTaGAGACATAGTCTTGACCAT +
Preference number: 4 (lower is better)
Translates to: GRERTLIYAEFNFKSTCTRYLQG*RHSLDH
Trigger: ATGGTCAAGACTATGTCTGCAGCCCTGAAGATACCT...GGTACATGTAGACTTGAAATTAAACTCAGCATAAATAAGAGTTCTCTCTCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTAGTATCTTATGTATTTaGCTTCCACTCCCTACTCTA +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVSILCI*LPLPTL
Trigger: TAGAGTAGGGAGTGGAAGGCAAATACATAAGATACT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAATGGCTCTACCTAACTaGAGGCTGAAAGAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEMALPN*RLKEKE
Trigger: TTCCTTTTCTTTCAGCCTGCAGTTAGGTAGAGCCAT...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGTGGCTAGAGGCTACTaGATTAGACAGCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGVARGY*IRQLRV
Trigger: AACTCTGAGCTGTCTAATGCAGTAGCCTCTAGCCAC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp TTAAGGATAGGAAACTGTAGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAATGGCTTTGGTGGAGGTaGCATAATTTCAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: LRIGNCSNPKEAACLTEKWLWWR*HNFNFG
Trigger: CCCAAAGTTGAAATTATGCCACCTCCACCAAAGCCA...TTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACTACAGTTTCCTATCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGTCTTTTGGCTTTGGTaGAGGTGGCATAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEVFWLW*RWHNFN
Trigger: GTTGAAATTATGCCACCTCCACCAAAGCCAAAAGAC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp TTAAGGATAGGAAACTGTAGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAAAACAGTCATGTCTTTTaGCTTTGGTGGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LRIGNCSNPKEAACLTEKNSHVF*LWWRWH
Trigger: ATGCCACCTCCACCAAAGCCAAAAGACATGACTGTT...TTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACTACAGTTTCCTATCCTTAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCATTATCACTGGTTTaGCAAAGGTACCACCAATTG +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEALSLV*QRYHQL
Trigger: CAATTGGTGGTACCTTTGCCAAACCAGTGATAATGC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAGGTGGCATTATCACTaGTTTGGCAAAGGTACCACC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGRWHYH*FGKGTT
Trigger: GGTGGTACCTTTGCCAAACCAGTGATAATGCCACCT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATATACTTCTCCTTTCTaGTTAAATCGGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEYTSPF*LNRGMA
Trigger: GGCCATTCCCCGATTTAACCAGAAAGGAGAAGTATA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTATACTTCTCCTTTCTaGTTAAATCGGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLYTSPF*LNRGMA
Trigger: GGCCATTCCCCGATTTAACCAGAAAGGAGAAGTATA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGGCCATGTCTGGAAATaGCCTACATTACTTCAACCC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGGHVWK*PTLLQP
Trigger: GGGTTGAAGTAATGTAGGCCATTTCCAGACATGGCC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTTCAGTTTTAGCAAGCTaGCCTGGAGTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPSVLAS*PGVLSH
Trigger: GTGTGAGAGAACTCCAGGCCAGCTTGCTAAAACTGA...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 72 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTaGGAAGCTCAAAAAGTTCAAGAATGTCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYS*EAQKVQECLIS
Trigger: ACTGATAAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
3UTR CAA 72 bp TACTTAGAAATCAGCAAGGAAATCCATCAAGTGATTTaGGGGATCCACTTTGAGTGGGAAGCCATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: YLEISKEIHQVI*GIHFEWEAMRN
Trigger: ATTTCTCATGGCTTCCCACTCAAAGTGGATCCCCAAAATCACTTGATGGATTTCCTTGCTGATTTCTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
3UTR CAA 72 bp GGTTATTTGCTTATTATGACAAGCCTGGGAAGACGTTaGGGTAGGTGCTTAAAATTAGAAGAAAAGACCCGA +
Preference number: 4 (lower is better)
Translates to: GYLLIMTSLGRR*GRCLKLEEKTR
Trigger: TCGGGTCTTTTCTTCTAATTTTAAGCACCTACCCAAACGTCTTCCCAGGCTTGTCATAATAAGCAAATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp ATATTCTGGCAGTTTTCATCCACAGAAGCGTTAAGGATAGGAAACTGTAGTAATAATTTCAACTTTGGGTaGAGGAGGCAATATAGCTCC +
Preference number: 4 (lower is better)
Translates to: IFWQFSSTEALRIGNCSNNFNFG*RRQYSS
Trigger: GGAGCTATATTGCCTCCTTCACCCAAAGTTGAAATT...ATTACTACAGTTTCCTATCCTTAACGCTTCTGTGGATGAAAACTGCCAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR TCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTTTTGTCTTTGCCTGTaGATACCGGAGGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLFCLCL*IPEVLI
Trigger: TATCAAAACCTCCGGTATTCACAGGCAAAGACAAAA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCCAGTTTCAAGCCATTaGCACAAAAACATCAGCACC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGPVSSH*HKNIST
Trigger: GGTGCTGATGTTTTTGTGTCAATGGCTTGAAACTGG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTAGTACCTTCCTTACATaGGGGAAGTTTGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPSTFLT*GKFAKV
Trigger: CACCTTTGCAAACTTCCCTCATGTAAGGAAGGTACT...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTTCATCATGAGACACTaGAGGAGTTTCAACAACATC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLFIMRH*RSFNNI
Trigger: GATGTTGTTGAAACTCCTGCAGTGTCTCATGATGAA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAATTCATCATGAGACACTaGAGGAGTTTCAACAACATC +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEFIMRH*RSFNNI
Trigger: GATGTTGTTGAAACTCCTGCAGTGTCTCATGATGAA...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAATATTGTTTTCCATTaGCAGACGGCGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGNIVFH*QTANCR
Trigger: CCTGCAGTTCGCCGTCTGGCAATGGAAAACAATATT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAGGTATCTTCAGGGCTaGAGACATAGTCTTGACCAT +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGRYLQG*RHSLDH
Trigger: ATGGTCAAGACTATGTCTGCAGCCCTGAAGATACCT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACTGCTCAGTATCCATTaGTATCCCAATGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLELLSIH*YPNVMR
Trigger: TCTCATAACATTGGGATAGCAATGGATACTGAGCAG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCAACATCAGAGATTCGTaGTATCTTCAGTGTTTAAGT +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISNIRDS*YLQCLS
Trigger: ACTTAAACACTGAAGATAGCACGAATCTCTGATGTT...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTCTCTCCAAATTCTCCTaGTCAGTTTTAGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPLSKFS*SVLASW
Trigger: CCAGCTTGCTAAAACTGAGCAGGAGAATTTGGAGAG...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTGCCCTTCTAATCTTATaGCAGCAACACAATGGGATC +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPALLIL*QQHNGI
Trigger: GATCCCATTGTGTTGCTGGCATAAGATTAGAAGGGC...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTAACACAAATCTCTCATaGTGGGTTGTAATTTCTATC +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVNTNLS*WVVISI
Trigger: GATAGAAATTACAACCCAGCATGAGAGATTTGTGTT...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTGGCTTTGGTGGAGGTaGCATAATTTCAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGWLWWR*HNFNFG
Trigger: CCCAAAGTTGAAATTATGCCACCTCCACCAAAGCCA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCACGAGCAAATGCAATaGGTTTTAATTCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLHEQMQ*VLILLG
Trigger: TCCGAGAAGAATTAAAACCCATTGCATTTGCTCGTG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGGTTTACATACTCTTTaGAAGCTCAAAAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVGLHTL*KLKKFK
Trigger: CTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTGCAAATTGAAATGTTaGATACATTCATCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SVMMETVYICAIWYGAISCKLKC*IHSSRC
Trigger: GCAACGAGATGAATGTATCCAACATTTCAATTTGCA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTATGCGCTGTAGAATTTaGAAGGCATTTGTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLMRCRI*KAFVSD
Trigger: GTCTGAAACAAATGCCTTCCAAATTCTACAGCGCAT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAACAAATCTCTCATGCTaGGTTGTAATTTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQETNLSC*VVISIC
Trigger: ACAGATAGAAATTACAACCCAGCATGAGAGATTTGT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAATTTCAACTTTGGGTaGAGGAGGCAATATAGCTCC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGNFNFG*RRQYSS
Trigger: GGAGCTATATTGCCTCCTTCACCCAAAGTTGAAATT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAACTCTGTGATCAGCTaGCCAGCTCACATTCATTAT +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGNSVIS*PAHIHY
Trigger: ATAATGAATGTGAGCTGGTCAGCTGATCACAGAGTT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGATTTTGACTGGAAATaGTGTGGGTTCACACACATG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGDFDWK*CGFTHM
Trigger: CATGTGTGTGAACCCACATCATTTCCAGTCAAAATC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGCTAAAGCATTGGAATaGATGTCTGTAGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGAKALE*MSVDQD
Trigger: GTCCTGATCTACAGACATTCATTCCAATGCTTTAGC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTCTTTGTGCTCAGTACTaGGACTGCCACATAATGAAT +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPLCAQY*DCHIMN
Trigger: ATTCATTATGTGGCAGTCTCAGTACTGAGCACAAAG...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GGGAGAGAGAGAACTCTTATTTATGCTGAGTTTAATTTCAAGTCTACATGTACCTTCATCATGAGACACTaGAGGAGTTTCAACAACATC +
Preference number: 4 (lower is better)
Translates to: GRERTLIYAEFNFKSTCTFIMRH*RSFNNI
Trigger: GATGTTGTTGAAACTCCTGCAGTGTCTCATGATGAA...GGTACATGTAGACTTGAAATTAAACTCAGCATAAATAAGAGTTCTCTCTCTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR GCA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTAGCACAGTAATTTaGTTGTGGTTAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEASTVI*LWLKAF
Trigger: AAAGGCTTTTAACCACAAGCAAATTACTGTGCTAGC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp ATATTCTGGCAGTTTTCATCCACAGAAGCGTTAAGGATAGGAAACTGTAGTAATCACGAGCAAATGCAATaGGTTTTAATTCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: IFWQFSSTEALRIGNCSNHEQMQ*VLILLG
Trigger: TCCGAGAAGAATTAAAACCCATTGCATTTGCTCGTG...ATTACTACAGTTTCCTATCCTTAACGCTTCTGTGGATGAAAACTGCCAGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTGCATTATCACTGGTTTaGCAAAGGTACCACCAATTG +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPALSLV*QRYHQL
Trigger: CAATTGGTGGTACCTTTGCCAAACCAGTGATAATGC...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGCATTATCACTGGTTTaGCAAAGGTACCACCAATTG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGALSLV*QRYHQL
Trigger: CAATTGGTGGTACCTTTGCCAAACCAGTGATAATGC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTATACTTCTCCTTTCTaGTTAAATCGGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGYTSPF*LNRGMA
Trigger: GGCCATTCCCCGATTTAACCAGAAAGGAGAAGTATA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTGTAACCTTTACTGGATaGCTCATAGCATCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPVTFTG*LIASGL
Trigger: TAACCCAGATGCTATGAGCCATCCAGTAAAGGTTAC...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTACTAAGACTCAAGTGTaGACAGAGTATTCTATTCTC +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLTKTQV*TEYSIL
Trigger: GAGAATAGAATACTCTGTCCACACTTGAGTCTTAGT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTCCTGTGGTAAGCCATaGAGTTCTGTTAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGSCGKP*SSVNLL
Trigger: CAGAAGATTAACAGAACTCCATGGCTTACCACAGGA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTTGAATCACTTTGTCTaGTCTGAGGTTATTTGCTTA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLLNHFV*SEVICL
Trigger: TAAGCAAATAACCTCAGAGCAGACAAAGTGATTCAA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGTTTTTATAGCTGACTaGACTCTTAGAACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLVFIAD*TLRTSL
Trigger: TAGAGAAGTTCTAAGAGTGCAGTCAGCTATAAAAAC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCACGAGCAAATGCAATaGGTTTTAATTCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGHEQMQ*VLILLG
Trigger: TCCGAGAAGAATTAAAACCCATTGCATTTGCTCGTG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGTTTACATACTCTTTaGAAGCTCAAAAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGLHTL*KLKKFK
Trigger: CTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAAACATTTGTATTCTTaGTACTGTAGGGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGKHLYS*YCRAVL
Trigger: CAGCACTGCCCTACAGTACCAAGAATACAAATGTTT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTTTGACCATTGCTTTTTaGAAGCCTTTTATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPLTIAF*KPFMGS
Trigger: AGAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAA...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR TCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTGACCATTGCTTTTTaGAAGCCTTTTATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGLTIAF*KPFMGS
Trigger: AGAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR GCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCAATTATTCTTGTCATaGTTCAGTTGTTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGQLFLS*FSCFCG
Trigger: GCCACAGAAACAACTGAAGCATGACAAGAATAATTG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTAAATTTGTAGAGGTCTaGGATCAGTCTCTAATACCT +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPKFVEV*DQSLIP
Trigger: AGGTATTAGAGACTGATCCCAGACCTCTACAAATTT...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTTTAAATAGCTACATGTaGCTAGAGGCTACTGCATTA +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPLNSYM*LEATAL
Trigger: TAATGCAGTAGCCTCTAGCCACATGTAGCTATTTAA...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTACAGTAATTTGCTTGTaGTTAAAAGCCTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPTVICL*LKAFVL
Trigger: GAGCACAAAGGCTTTTAACCACAAGCAAATTACTGT...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR GCA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTCACATAACATTACCCTaGCACAATGAAATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPHITLP*HNEICR
Trigger: TCTACAAATTTCATTGTGGCAGGGTAATGTTATGTG...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CCA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGGTTTACATACTCTTTaGAAGCTCAAAAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGGLHTL*KLKKFK
Trigger: CTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCACACGGAGAGCAGCAGTaGTTTTCAGGAAGTGATGTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPHGEQQ*FSGSDV
Trigger: CACATCACTTCCTGAAAACAACTGCTGCTCTCCGTG...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCTGCGCTCCTGCCCCTTaGGCCCTCTTCAGGGAATCC +
Preference number: 5 (lower is better)
Translates to: SVMMETVYICAIWYGAISCAPAP*ALFRES
Trigger: GGATTCCCTGAAGAGGGCCAAAGGGGCAGGAGCGCA...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATGTGTCCGGCCTCTCTaGGTGATTTTGACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPCVRPL*VILTGN
Trigger: ATTTCCAGTCAAAATCACCAAGAGAGGCCGGACACA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS TCA 90 bp TTGGAAAGAGTAAATGTTCCTCCTGTAAGATCAGTGGTGCTGAGCTaGCTCACAGAGCCCAATTTCTGGAGGCGGTTCAGTTCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: LERVNVPPVRSVVLS*LTEPNFWRRFSSVA
Trigger: CGCCACTGAACTGAACCGCCTCCAGAAATTGGGCTCTGTGAGTCAGCTCAGCACCACTGATCTTACAGGAGGAACATTTACTCTTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAGCCAGTTTCAAGCCATaGACACAAAAACATCAGCAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPASFKP*TQKHQH
Trigger: GTGCTGATGTTTTTGTGTCAATGGCTTGAAACTGGC...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CTAGTCACATTACTGCCAATGTTACCTTCAGGCCATGTGGAACTAGGTCACCCTCACGGAGAGCAGCAGTaGTTTTCAGGAAGTGATGTG +
Preference number: 5 (lower is better)
Translates to: LVTLLPMLPSGHVELGHPHGEQQ*FSGSDV
Trigger: CACATCACTTCCTGAAAACAACTGCTGCTCTCCGTG...AGGGTGACCTAGTTCCACATGGCCTGAAGGTAACATTGGCAGTAATGTGACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CAA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGGCGAACTGCAGGAGTaGCCAGTGTTTTTCGGCCCT +
Preference number: 5 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVGELQE*PVFFGP
Trigger: AGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGCC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCATCACTCAGCTTAATATaGTTTTCCATTGCCAGACGG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPSLSLI*FSIARR
Trigger: CCGTCTGGCAATGGAAAACAATATTAAGCTGAGTGA...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAGAGGACAGAAAACAGTaGGTATTTGCTGATGGAGAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPEDRKQ*VFADGE
Trigger: TTCTCCATCAGCAAATACCAACTGTTTTCTGTCCTC...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGGCGAACTGCAGGAGTaGCCAGTGTTTTTCGGCCCT +
Preference number: 5 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEGELQE*PVFFGP
Trigger: AGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGCC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAGGGTTTACATACTCTTaGGAAGCTCAAAAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPGFTYS*EAQKVQ
Trigger: TTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCC...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACAGAGTCTTGCTCTGTCGCCCAGAACTGCAATTATTCTaGTCATGCTTCAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHRVLLCRPELQLF*SCFSCF
Trigger: GAAACAACTGAAGCATGACAAGAATAATTGCAGTTC...TGGGCGACAGAGCAAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGTGGGGGCACTTACATaGCCCGTTGGAGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEVGALT*PVGGDS
Trigger: AGAGTCTCCTCCAACGGGCAATGTAAGTGCCCCCAC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS GCA 90 bp AACTTCACTCAGCTTAATATTGTTTTCCATTGCCAGACGGCGAACTaGAGGAGTTGCCAGTGTTTTTCGGCCCTTTATCTCTTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: NFTQLNIVFHCQTAN*RSCQCFSALYLLVC
Trigger: ACACACCAAGAGATAAAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGCCGTCTGGCAATGGAAAACAATATTAAGCTGAGTGAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp TTAAGGATAGGAAACTGTAGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAAGGCGAACTGCAGGAGTaGCCAGTGTTTTTCGGCCCT +
Preference number: 5 (lower is better)
Translates to: LRIGNCSNPKEAACLTEKGELQE*PVFFGP
Trigger: AGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGCC...TTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACTACAGTTTCCTATCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CAA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGAACAGTCATGTCTTTaGGCTTTGGTGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SVMMETVYICAIWYGAISEQSCL*ALVEVA
Trigger: TGCCACCTCCACCAAAGCCAAAAGACATGACTGTTC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTAACCTCCACCTCTaGGGCTCAAGCAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQECNLHL*GSSNSP
Trigger: AGGAGAATTGCTTGAGCCCAAGAGGTGGAGGTTACA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAACATCTGGGTGGGAGTaGTGGCCAACACTGATTACA +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQETSGWE*WPTLIT
Trigger: TGTAATCAGTGTTGGCCACAACTCCCACCCAGATGT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATTCACTGTGGCAAGTTaGTCCTCCTCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEFTVAS*SSSVQS
Trigger: GCTTTGGACAGAGGAGGACAAACTTGCCACAGTGAA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCTGTCTCCCTCTCCTTaGTCCTCCACCACAAGGTTG +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLLSPSP*SSTTRL
Trigger: CAACCTTGTGGTGGAGGACAAAGGAGAGGGAGACAG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681780.1
CDS TCA 90 bp TGGAGGCGGTTCAGTTCAGTGGCGATGTCAAATATAGAGCAGATCTaGACATTTTTCACATTAGGGACAATCAAACCCTGCTCAGTATCC +
Preference number: 5 (lower is better)
Translates to: WRRFSSVAMSNIEQI*TFFTLGTIKPCSVS
Trigger: GGATACTGAGCAGGGTTTGATTGTCCCTAATGTGAAAAATGTTCAGATCTGCTCTATATTTGACATCGCCACTGAACTGAACCGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACCAAACACCCATCCCTaGCTTTGTAGAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEPNTHP*LCRASW
Trigger: CCATGAGGCTCTACAAAGCAAGGGATGGGTGTTTGG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGACCCATTCAAGAAGTTaGGCAGAAGGAGCAAGACAG +
Preference number: 5 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRTHSRS*AEGARQ
Trigger: CTGTCTTGCTCCTTCTGCCAAACTTCTTGAATGGGT...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCCTTCTGTCCTGTCTCTaGTTGAGTCACAACAGCTGT +
Preference number: 5 (lower is better)
Translates to: SVMMETVYICAIWYGAISLLSCL*LSHNSC
Trigger: ACAGCTGTTGTGACTCAACAAGAGACAGGACAGAAG...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACACTTACATTGCCCGTaGGAGGAGACTCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEHLHCP*EETLPS
Trigger: AGAAGGCAGAGTCTCCTCCAACGGGCAATGTAAGTG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS TCA 90 bp CATGTCTTTTGGCTTTGGTGGAGGTGGCATAATTTCAACTTTGGGTaGAGGAGGCAATATAGCTCCTGTCTGCTTTTCCAAATAGTTGAG +
Preference number: 5 (lower is better)
Translates to: HVFWLWWRWHNFNFG*RRQYSSCLLFQIVE
Trigger: CTCAACTATTTGGAAAAGCAGACAGGAGCTATATTGCCTCCTTCACCCAAAGTTGAAATTATGCCACCTCCACCAAAGCCAAAAGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCACGGAGAGCAGCAGTaGTTTTCAGGAAGTGATGTG +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLHGEQQ*FSGSDV
Trigger: CACATCACTTCCTGAAAACAACTGCTGCTCTCCGTG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGGCATTATCACTGGTTaGGCAAAGGTACCACCAATT +
Preference number: 5 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRGIITG*AKVPPI
Trigger: AATTGGTGGTACCTTTGCCAAACCAGTGATAATGCC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGGCATTATCACTGGTTaGGCAAAGGTACCACCAATT +
Preference number: 5 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVGIITG*AKVPPI
Trigger: AATTGGTGGTACCTTTGCCAAACCAGTGATAATGCC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTGCCAGTTTCAAGCCATaGACACAAAAACATCAGCAC +
Preference number: 5 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVASFKP*TQKHQH
Trigger: GTGCTGATGTTTTTGTGTCAATGGCTTGAAACTGGC...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAGCCAGTTTCAAGCCATaGACACAAAAACATCAGCAC +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEASFKP*TQKHQH
Trigger: GTGCTGATGTTTTTGTGTCAATGGCTTGAAACTGGC...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGGAGTATCTTGAGCCATaGATGCTGGACCTACATACT +
Preference number: 5 (lower is better)
Translates to: HNEICRGLGSVSNTSSIREYLEP*MLDLHT
Trigger: AGTATGTAGGTCCAGCATCAATGGCTCAAGATACTC...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAATCCATCAAGTGATTTaGGGGATCCACTTTGAGTGG +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEIHQVI*GIHFEW
Trigger: CCACTCAAAGTGGATCCCCAAAATCACTTGATGGAT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACTGTCCTGTCTCTTGTaGAGTCACAACAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLELSCLL*SHNSCS
Trigger: GGAACAGCTGTTGTGACTCAACAAGAGACAGGACAG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp ATATTCTGGCAGTTTTCATCCACAGAAGCGTTAAGGATAGGAAACTGTAGTAATGAACAGTCATGTCTTTaGGCTTTGGTGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: IFWQFSSTEALRIGNCSNEQSCL*ALVEVA
Trigger: TGCCACCTCCACCAAAGCCAAAAGACATGACTGTTC...ATTACTACAGTTTCCTATCCTTAACGCTTCTGTGGATGAAAACTGCCAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGTTCTGTTTTGTCTTaGCCTGTGAATACCGGAGGT +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGSVLS*PVNTGG
Trigger: ACCTCCGGTATTCACAGGCAAAGACAAAACAGAACC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAAGGTACCACCAATaGATCCAATGTTGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVQRYHQ*IQCWKE
Trigger: CTCTTTCCAACATTGGATCAATTGGTGGTACCTTTG...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCGAAAACAGTTGGTATTaGCTGATGGAGAACCACTTC +
Preference number: 5 (lower is better)
Translates to: SVMMETVYICAIWYGAISENSWY*LMENHF
Trigger: GAAGTGGTTCTCCATCAGCAAATACCAACTGTTTTC...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAGGAATGAGCACTGTTaGAACCCAGGAGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGRNEHC*NPGDGG
Trigger: ACCTCCGTCTCCTGGGTTCAAACAGTGCTCATTCCT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp TCTGTGATGATGGAAACAGTCTACATCTGTGCTATCTGGTATGGTGCTATAAGCAGTGACACCATTCTGTaGAAACTGGAGTATACTGCA +
Preference number: 5 (lower is better)
Translates to: SVMMETVYICAIWYGAISSDTIL*KLEYTA
Trigger: TGCAGTATACTCCAGTTTCAACAGAATGGTGTCACT...GCTTATAGCACCATACCAGATAGCACAGATGTAGACTGTTTCCATCATCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS TCA 90 bp CACAAATTGGAGAAGCGTGACATTGTAGCACCATCAATAACTCTGTaGTCAGCTGACCAGCTCACATTCATTATCTGTGCCTTATATACT +
Preference number: 5 (lower is better)
Translates to: HKLEKRDIVAPSITL*SADQLTFIICALYT
Trigger: AGTATATAAGGCACAGATAATGAATGTGAGCTGGTCAGCTGATCACAGAGTTATTGATGGTGCTACAATGTCACGCTTCTCCAATTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS CCA 90 bp AACATTACCACATGTTTGAAAATAGCGAACACAAATCTCTCATGCTaGGTTGTAATTTCTATCTGTCTCCCTCTCCTTTGTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: NITTCLKIANTNLSC*VVISICLPLLCPPP
Trigger: TGGTGGAGGACAAAGGAGAGGGAGACAGATAGAAATTACAACCCAGCATGAGAGATTTGTGTTCGCTATTTTCAAACATGTGGTAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681780.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCACGGAGAGCAGCAGTaGTTTTCAGGAAGTGATGTG +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGHGEQQ*FSGSDV
Trigger: CACATCACTTCCTGAAAACAACTGCTGCTCTCCGTG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAGGCATAATTTCAACTTaGGGTGAAGGAGGCAATATA +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEGIIST*GEGGNI
Trigger: TATATTGCCTCCTTCACCCAAAGTTGAAATTATGCC...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGAACAGTCATGTCTTTaGGCTTTGGTGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGEQSCL*ALVEVA
Trigger: TGCCACCTCCACCAAAGCCAAAAGACATGACTGTTC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCTTGACCATTGCTTTTaGAAAGCCTTTTATGGGTTC +
Preference number: 5 (lower is better)
Translates to: EHVLAQLGFTYSLEAQKVLDHCF*KAFYGF
Trigger: GAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAAG...AACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAACTTGACCATTGCTTTTaGAAAGCCTTTTATGGGTTC +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQELDHCF*KAFYGF
Trigger: GAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAAG...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGGCATTATCACTGGTTaGGCAAAGGTACCACCAATT +
Preference number: 5 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEGIITG*AKVPPI
Trigger: AATTGGTGGTACCTTTGCCAAACCAGTGATAATGCC...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCTCTTCTCTAGGTTATaGGCACAGACCCACTTCCAG +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGLFSRL*AQTHFQ
Trigger: CTGGAAGTGGGTCTGTGCCAATAACCTAGAGAAGAG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTCTGGCTCCTTCTATCTaGTGTGGTGCCATCTTCAAC +
Preference number: 5 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPLAPSI*CGAIFN
Trigger: GTTGAAGATGGCACCACACAAGATAGAAGGAGCCAG...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CACAATGAAATTTGTAGAGGTCTGGGATCAGTCTCTAATACCTCCTCCATAAGGAGCACAGTAATTTGCTaGTGGTTAAAAGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: HNEICRGLGSVSNTSSIRSTVIC*WLKAFV
Trigger: CACAAAGGCTTTTAACCACAAGCAAATTACTGTGCT...CCTTATGGAGGAGGTATTAGAGACTGATCCCAGACCTCTACAAATTTCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTGTCCAAAGCAACAATaGAACCAACAGGCCCTTCTA +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLCPKQQ*NQQALL
Trigger: TAGAAGGGCCTGTTGGTTCAATTGTTGCTTTGGACA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GGGAGAGAGAGAACTCTTATTTATGCTGAGTTTAATTTCAAGTCTACATGTACCTCGGCCCTTTATCTCTaGGTGTGTATGTTCATCATG +
Preference number: 5 (lower is better)
Translates to: GRERTLIYAEFNFKSTCTSALYL*VCMFIM
Trigger: CATGATGAACATACACACCAAGAGATAAAGGGCCGA...GGTACATGTAGACTTGAAATTAAACTCAGCATAAATAAGAGTTCTCTCTCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTTCACTCAGCTTAATATaGTTTTCCATTGCCAGACGG +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLSLSLI*FSIARR
Trigger: CCGTCTGGCAATGGAAAACAATATTAAGCTGAGTGA...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp AGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAAGAATGCAATTTTAGTACTGGTTCTGTTTTGTCTTaGCCTGTGAATACCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SNPKEAACLTEKECNFSTGSVLS*PVNTGG
Trigger: ACCTCCGGTATTCACAGGCAAAGACAAAACAGAACC...AGTACTAAAATTGCATTCTTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGGTTCTGTTTTGTCTTaGCCTGTGAATACCGGAGGT +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGGSVLS*PVNTGG
Trigger: ACCTCCGGTATTCACAGGCAAAGACAAAACAGAACC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp AATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAACAAAGGTACCACCAATaGATCCAATGTTGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: NCKDEHVLAQLGFTYSLEQRYHQ*IQCWKE
Trigger: CTCTTTCCAACATTGGATCAATTGGTGGTACCTTTG...TTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCACATGTTCATCTTTACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTATGCCCGGCCTAATTTaGTTAATCTTGCCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLMPGLI*LILPVS
Trigger: TGAAACTGGCAAGATTAACAAAATTAGGCCGGGCAT...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681617.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCTCGCAGCAATAATTTaGGCTTCTCCCCCATGTACA +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGLAAII*ASPPCT
Trigger: TGTACATGGGGGAGAAGCCAAAATTATTGCTGCGAG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTAGAGCCTTGATTTTCTaGCTGACCACTCGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPRALIF*LTTRSN
Trigger: ATTGCTGCGAGTGGTCAGCAAGAAAATCAAGGCTCT...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAACTTCATGGAAACATTaGTATTCTTGGTACTGTAGG +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQETSWKH*YSWYCR
Trigger: CCTACAGTACCAAGAATACAAATGTTTCCATGAAGT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CAAAAACTTCATCTATCTAATTCACCTTTATCCATAATCTCTACCCTAGAGCCTACTGTAAAGAGTGCCTaGGGCATGCGCTGTAGAATT +
Preference number: 5 (lower is better)
Translates to: QKLHLSNSPLSIISTLEPTVKSA*GMRCRI
Trigger: AATTCTACAGCGCATGCCCAAGGCACTCTTTACAGT...AGGCTCTAGGGTAGAGATTATGGATAAAGGTGAATTAGATAGATGAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAAATATGAAGAATCTCTaGAGAAGTGTTATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQENMKNL*RSVMGH
Trigger: ATGGCCCATAACACTTCTCAAGAGATTCTTCATATT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAAAGAGAAGGGAGTTCTTaGTTTTTCGTTTGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEREGSS*FFVCFR
Trigger: CCTAAAACAAACGAAAAACAAAGAACTCCCTTCTCT...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GTGCTGGCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATTTCTCGCAGCACACTaGAAGTTAAATAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: VLAQLGFTYSLEAQKVQEFLAAH*KLNSFF
Trigger: GAAAAAGCTATTTAACTTCAAGTGTGCTGCGAGAAA...TTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGCCAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp TTAAGGATAGGAAACTGTAGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAATCACTCAGCTTAATATaGTTTTCCATTGCCAGACGG +
Preference number: 5 (lower is better)
Translates to: LRIGNCSNPKEAACLTEKSLSLI*FSIARR
Trigger: CCGTCTGGCAATGGAAAACAATATTAAGCTGAGTGA...TTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACTACAGTTTCCTATCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGCATAATTTCAACTTaGGGTGAAGGAGGCAATATA +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGIIST*GEGGNI
Trigger: TATATTGCCTCCTTCACCCAAAGTTGAAATTATGCC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCTTGACCATTGCTTTTaGAAAGCCTTTTATGGGTTC +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLLDHCF*KAFYGF
Trigger: GAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAAG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGCCTGCTCAGTATCCATaGCTATCCCAATGTTATGAG +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGPAQYP*LSQCYE
Trigger: CTCATAACATTGGGATAGCAATGGATACTGAGCAGG...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGAGCCTGGGAAGACGTTaGGGTAGGTGCTTAAAATTA +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGSLGRR*GRCLKL
Trigger: TAATTTTAAGCACCTACCCAAACGTCTTCCCAGGCT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTCAATTTGTGAAACCTTaGGTTTGCAGAGTTGTTAGC +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLQFVKP*VCRVVS
Trigger: GCTAACAACTCTGCAAACCAAAGGTTTCACAAATTG...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370132.8
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGTCACTCAGCTTAATATaGTTTTCCATTGCCAGACGG +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGSLSLI*FSIARR
Trigger: CCGTCTGGCAATGGAAAACAATATTAAGCTGAGTGA...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp TTAAGGATAGGAAACTGTAGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAAGGCATAATTTCAACTTaGGGTGAAGGAGGCAATATA +
Preference number: 5 (lower is better)
Translates to: LRIGNCSNPKEAACLTEKGIIST*GEGGNI
Trigger: TATATTGCCTCCTTCACCCAAAGTTGAAATTATGCC...TTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACTACAGTTTCCTATCCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS-3UTR CAA 90 bp GCACAGCTAGGGTTTACATACTCTTTGGAAGCTCAAAAAGTTCAAGAATGTCTTGGGTTTACATACTCTTaGGAAGCTCAAAAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: AQLGFTYSLEAQKVQECLGFTYS*EAQKVQ
Trigger: TTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCC...AAGACATTCTTGAACTTTTTGAGCTTCCAAAGAGTATGTAAACCCTAGCTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGATGCCCGGCCTAATTTaGTTAATCTTGCCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGMPGLI*LILPVS
Trigger: TGAAACTGGCAAGATTAACAAAATTAGGCCGGGCAT...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370132.8
ENST00000681617.1
CDS GCA 90 bp AACATTTTTCACATTAGGGACAATCAAACCCTGCTCAGTATCCATTaGTATCCCAATGTTATGAGAAGCCTTATATGTTATATTCTGGCA +
Preference number: 5 (lower is better)
Translates to: NIFHIRDNQTLLSIH*YPNVMRSLICYILA
Trigger: TGCCAGAATATAACATATAAGGCTTCTCATAACATTGGGATAGCAATGGATACTGAGCAGGGTTTGATTGTCCCTAATGTGAAAAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp CAAATCATTTACAATATAAATTGTAAAGATGAACATGTGCTGGCACAGCTAGGGGGCATAATTTCAACTTaGGGTGAAGGAGGCAATATA +
Preference number: 5 (lower is better)
Translates to: QIIYNINCKDEHVLAQLGGIIST*GEGGNI
Trigger: TATATTGCCTCCTTCACCCAAAGTTGAAATTATGCC...CCCTAGCTGTGCCAGCACATGTTCATCTTTACAATTTATATTGTAAATGATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS-3UTR CAA 90 bp AGTAATCCCAAGGAAGCAGCCTGTTTAACAGAAAAAGAATGCAATTTTAGTACTCTTGACCATTGCTTTTaGAAAGCCTTTTATGGGTTC +
Preference number: 5 (lower is better)
Translates to: SNPKEAACLTEKECNFSTLDHCF*KAFYGF
Trigger: GAACCCATAAAAGGCTTTCAAAAAGCAATGGTCAAG...AGTACTAAAATTGCATTCTTTTTCTGTTAAACAGGCTGCTTCCTTGGGATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370131.3
CDS GCA 72 bp GTCACCAAGGCAGGAGCATCAGCTTCCCCGCATTCCTaGTCCAGGTTCTCAGCATACGGACTGCAGCCATCT +
Preference number: 6 (lower is better)
Translates to: VTKAGASASPHS*SRFSAYGLQPS
Trigger: AGATGGCTGCAGTCCGTATGCTGAGAACCTGGAGCAGGAATGCGGGGAAGCTGATGCTCCTGCCTTGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681780.1
CDS TCA 72 bp GTAAATGTTCCTCCTGTAAGATCAGTGGTGCTGAGCTaGCTCACAGAGCCCAATTTCTGGAGGCGGTTCAGT +
Preference number: 6 (lower is better)
Translates to: VNVPPVRSVVLS*LTEPNFWRRFS
Trigger: ACTGAACCGCCTCCAGAAATTGGGCTCTGTGAGTCAGCTCAGCACCACTGATCTTACAGGAGGAACATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS CAA 72 bp TATTGTTTTCCATTGCCAGACGGCGAACTGCAGGAGTaGCCAGTGTTTTTCGGCCCTTTATCTCTTGGTGTG +
Preference number: 6 (lower is better)
Translates to: YCFPLPDGELQE*PVFFGPLSLGV
Trigger: CACACCAAGAGATAAAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGCCGTCTGGCAATGGAAAACAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS CAA 90 bp ACGGCGAACTGCAGGAGTTGCCAGTGTTTTTCGGCCCTTTATCTCTaGGTGTGTATGTTCATCATGAGACACTGCAGGAGTTTCAACAAC +
Preference number: 6 (lower is better)
Translates to: TANCRSCQCFSALYL*VCMFIMRHCRSFNN
Trigger: GTTGTTGAAACTCCTGCAGTGTCTCATGATGAACATACACACCAAGAGATAAAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS GCA 72 bp CAGCTTAATATTGTTTTCCATTGCCAGACGGCGAACTaGAGGAGTTGCCAGTGTTTTTCGGCCCTTTATCTC +
Preference number: 6 (lower is better)
Translates to: QLNIVFHCQTAN*RSCQCFSALYL
Trigger: GAGATAAAGGGCCGAAAAACACTGGCAACTCCTGCAGTTCGCCGTCTGGCAATGGAAAACAATATTAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS CAA 72 bp GCCCCAATGGCTACTTCAGGTGGCATTATCACTGGTTaGGCAAAGGTACCACCAATTGATCCAATGTTGGAA +
Preference number: 6 (lower is better)
Translates to: APMATSGGIITG*AKVPPIDPMLE
Trigger: TTCCAACATTGGATCAATTGGTGGTACCTTTGCCAAACCAGTGATAATGCCACCTGAAGTAGCCATTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS TCA 72 bp TGGCTTTGGTGGAGGTGGCATAATTTCAACTTTGGGTaGAGGAGGCAATATAGCTCCTGTCTGCTTTTCCAA +
Preference number: 6 (lower is better)
Translates to: WLWWRWHNFNFG*RRQYSSCLLFQ
Trigger: TTGGAAAAGCAGACAGGAGCTATATTGCCTCCTTCACCCAAAGTTGAAATTATGCCACCTCCACCAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS TCA 72 bp GAGAAGCGTGACATTGTAGCACCATCAATAACTCTGTaGTCAGCTGACCAGCTCACATTCATTATCTGTGCC +
Preference number: 6 (lower is better)
Translates to: EKRDIVAPSITL*SADQLTFIICA
Trigger: GGCACAGATAATGAATGTGAGCTGGTCAGCTGATCACAGAGTTATTGATGGTGCTACAATGTCACGCTTCTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS GCA 72 bp GCCAACAACTTCACTCAGCTTAATATTGTTTTCCATTaGCAGACGGCGAACTGCAGGAGTTGCCAGTGTTTT +
Preference number: 6 (lower is better)
Translates to: ANNFTQLNIVFH*QTANCRSCQCF
Trigger: AAAACACTGGCAACTCCTGCAGTTCGCCGTCTGGCAATGGAAAACAATATTAAGCTGAGTGAAGTTGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS GCA 72 bp CTCATCACAATAACCAAAATGAGGTATCTTCAGGGCTaGAGACATAGTCTTGACCATTGCTTTTTGAAAGCC +
Preference number: 6 (lower is better)
Translates to: LITITKMRYLQG*RHSLDHCFLKA
Trigger: GGCTTTCAAAAAGCAATGGTCAAGACTATGTCTGCAGCCCTGAAGATACCTCATTTTGGTTATTGTGATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370131.3
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS TCA 72 bp TTCAGTTCAGTGGCGATGTCAAATATAGAGCAGATCTaGACATTTTTCACATTAGGGACAATCAAACCCTGC +
Preference number: 6 (lower is better)
Translates to: FSSVAMSNIEQI*TFFTLGTIKPC
Trigger: GCAGGGTTTGATTGTCCCTAATGTGAAAAATGTTCAGATCTGCTCTATATTTGACATCGCCACTGAACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS GCA 72 bp CACATTAGGGACAATCAAACCCTGCTCAGTATCCATTaGTATCCCAATGTTATGAGAAGCCTTATATGTTAT +
Preference number: 6 (lower is better)
Translates to: HIRDNQTLLSIH*YPNVMRSLICY
Trigger: ATAACATATAAGGCTTCTCATAACATTGGGATAGCAATGGATACTGAGCAGGGTTTGATTGTCCCTAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS CCA 72 bp ACATTCATTATCTGTGCCTTATATACTTCTCCTTTCTaGTTAAATCGGGGAATGGCCTTAATTGATCCAAGG +
Preference number: 6 (lower is better)
Translates to: TFIICALYTSPF*LNRGMALIDPR
Trigger: CCTTGGATCAATTAAGGCCATTCCCCGATTTAACCAGAAAGGAGAAGTATATAAGGCACAGATAATGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370132.8
ENST00000681617.1
ENST00000681780.1
CDS CCA 72 bp ACATGTTTGAAAATAGCGAACACAAATCTCTCATGCTaGGTTGTAATTTCTATCTGTCTCCCTCTCCTTTGT +
Preference number: 6 (lower is better)
Translates to: TCLKIANTNLSC*VVISICLPLLC
Trigger: ACAAAGGAGAGGGAGACAGATAGAAATTACAACCCAGCATGAGAGATTTGTGTTCGCTATTTTCAAACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681780.1