RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DBP (Homo sapiens)

Ensembl gene IDs: ENSG00000105516

Ensembl transcript IDs: ENST00000222122.10, ENST00000593500.1, ENST00000594723.1, ENST00000599385.5, ENST00000601104.1

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTaGCCTCTATGGACGACAGCCCGGAGCTGCCCACGGGCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: DSPREDSDSSTSSSA*PLWTTARSCPRAAA
Trigger: GGCTGCAGCCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCTGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR CCA 90 bp CGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATaGACGACAGCCCGGAGCTGCCCACGGGCTGCAGCCAGTATGCCA +
Preference number: 1 (lower is better)
Translates to: REDSDSSTSSSACPL*TTARSCPRAAASMP
Trigger: TGGCATACTGGCTGCAGCCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR GCA 90 bp AGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTaGCCACGGGCTGCAGCCAGTATGCCAGGGAGCTGCCCTCTTCTT +
Preference number: 1 (lower is better)
Translates to: STSSSACPLWTTARS*PRAAASMPGSCPLL
Trigger: AAGAAGAGGGCAGCTCCCTGGCATACTGGCTGCAGCCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR TCA 90 bp CTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTaGGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGG +
Preference number: 1 (lower is better)
Translates to: LSPDACHLLLPGQDG*GRSLFYASPNDRTW
Trigger: CCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR GCA 90 bp ACAGCCCGGAGCTGCCCACGGGCTGCAGCCAGTATGCCAGGGAGCTaGCCTCTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTT +
Preference number: 1 (lower is better)
Translates to: TARSCPRAAASMPGS*PLLPQQLALGFSRF
Trigger: AAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAGAGGGCAGCTCCCTGGCATACTGGCTGCAGCCCGTGGGCAGCTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR TCA 90 bp CCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGAGAGGCTaGGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAA +
Preference number: 1 (lower is better)
Translates to: PWPRRTNLWLQARRG*ALIPRRSPGLTVRK
Trigger: TTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCTCAGCCTCTCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601104.1
3UTR-3UTR CCA 90 bp CTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCAGCTGGCCGGCCCGTaGGCCACAGGGCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: LRLQHFQQRLPSMDDSPEQLAGP*ATGQEG
Trigger: CCCTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTG...CTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR CCA 90 bp CGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCATTATCACGTCCCTaGGGCACCCAGCTGGCCGGC +
Preference number: 2 (lower is better)
Translates to: REDSDSSTSSSACPLWTTALSRP*GTQLAG
Trigger: GCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGC...TGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR CCA 90 bp CGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTAAGCGCCTGCCCTCTATaGACGACAGCCCGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RLPPAPTRPGWLRAESILSACPL*TTARSC
Trigger: GCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCT...TAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR GCA 90 bp GCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGTCCTCTCAGACCTTCTaGCCTTCCTCCATCCGACAG +
Preference number: 2 (lower is better)
Translates to: ASPHPLRCLHLAGQSAQESSQTF*PSSIRQ
Trigger: CTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGA...CTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR GCA 90 bp CGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACCCCTGTTCGTCTCATaGGCGTCCTCCGTCCCCAAT +
Preference number: 2 (lower is better)
Translates to: RLPPAPTRPGWLRAESILPLFVS*ASSVPN
Trigger: ATTGGGGACGGAGGACGCGCATGAGACGAACAGGGG...TAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR GCA 90 bp TCATTCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTAGTATGCCAGGGAGCTaGCCTCTTCTTCCACAACAG +
Preference number: 2 (lower is better)
Translates to: SFLSDLLPFLHPTARGRTSMPGS*PLLPQQ
Trigger: CTGTTGTGGAAGAAGAGGGCAGCTCCCTGGCATACT...AGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR CCA 90 bp CTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCTTCTTCCACAACAGCTaGCTCTGGGGTTCTCAAGAT +
Preference number: 2 (lower is better)
Translates to: LPPSDSPREDSDSSTSSSFFHNS*LWGSQD
Trigger: ATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAA...GCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR CCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCGCCCCTCCCTGGCTGTaGGGCATGTCTCCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLAPPWL*GMSPAK
Trigger: CTTGGCTGGAGACATGCCCCACAGCCAGGGAGGGGC...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
3UTR-3UTR TCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCCAGGCCAGGAGAGGCTaGGCACTAATCCCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLQARRG*ALIPRR
Trigger: TCTCCTTGGGATTAGTGCTCAGCCTCTCCTGGCCTG...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601104.1
3UTR-3UTR GCA 90 bp AGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTACCCCATCCACTCCGGTaGCTCCATTTAGCTGGCCAA +
Preference number: 2 (lower is better)
Translates to: SLFYASPNDRTWNVLAGVPHPLR*LHLAGQ
Trigger: TTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGG...TACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR-3UTR GCA 90 bp GCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTATAAATGTATTTATCTaGATTATCACGTCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: ATCSYPARMAEGGVYFTRINVFI*IITSLG
Trigger: CCCCAGGGACGTGATAATGCAGATAAATACATTTAT...ACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR GCA 72 bp CGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTaGCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: RSGPAASPHPLR*LHLAGQSAQEG
Trigger: CCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR GCA 72 bp GTTAACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTaGCGGGGACACACACAGAGAACCCTCCCCGCCCCC +
Preference number: 3 (lower is better)
Translates to: VNGGGGRIGSLT*RGHTQRTLPAP
Trigger: GGGGGCGGGGAGGGTTCTCTGTGTGTGTCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTTAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR GCA 72 bp CGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTaGCCTCTATGGACGACAGCCCGGAGCTGCCCACGG +
Preference number: 3 (lower is better)
Translates to: REDSDSSTSSSA*PLWTTARSCPR
Trigger: CCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR GCA 72 bp CCCTCTATGGACGACAGCCCGGAGCTGCCCACGGGCTaGAGCCAGTATGCCAGGGAGCTGCCCTCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: PSMDDSPELPTG*SQYARELPSSS
Trigger: GGAAGAAGAGGGCAGCTCCCTGGCATACTGGCTGCAGCCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR TCA 72 bp GACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTaGGGGCGGAGTCTATTTTACGCGTCGCCCAATGAC +
Preference number: 3 (lower is better)
Translates to: DACHLLLPGQDG*GRSLFYASPND
Trigger: GTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR TCA 72 bp TGGCTGAGGGCGGAGTCTATTTTACGCGTCGCCCAATaGCAGGACCTGGAATGTACTGGCTGGGGTAGGCCT +
Preference number: 3 (lower is better)
Translates to: WLRAESILRVAQ*QDLECTGWGRP
Trigger: AGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
3UTR CCA 72 bp CGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTaGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCG +
Preference number: 3 (lower is better)
Translates to: RSLFYASPNDRT*NVLAGVGLSES
Trigger: CGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGCAGCTGGCCGGCCCGTaGGCCACAGGGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKQLAGP*ATGQEG
Trigger: CCCTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTG...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp CTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCCGCCGAACGGCAGCGTaGGCTCCCACAGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: LHYHVPGAPSWPARGPQGRRTAA*APTAVA
Trigger: CGCCACTGCTGTGGGAGCGCACGCTGCCGTTCGGCG...GCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR TCA 90 bp CTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCGGCCGAGTCACGTGCTaGCGCCTGCTTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHYHVPGAPSWPARGPQGGRVTC*RLLPSS
Trigger: GGAGGAGGGAAGCAGGCGTCAGCACGTGACTCGGCC...GCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599385.5
CDS-3UTR CCA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGCACAGGGCCCCGTGCTaGGCCTGGTATCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKHRAPC*AWYRDS
Trigger: GCTGTCCCGATACCAGGCCCAGCACGGGGCCCTGTG...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp ATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCGCTCCCACAGCAGTaGCGCCAACAGACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ICIITSLGHPAGRPVGHRALPQQ*RQQTRG
Trigger: GCCCCGGGTCTGTTGGCGCCACTGCTGTGGGAGCGC...CCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGGAGAGCTCCGCCAGGTaGGGATGTGGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKESSAR*GCGAAS
Trigger: TGAGGCTGCCCCACATCCCCACCTGGCGGAGCTCTC...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp ATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGCCTCACAGGGCCCCGTaGTGGGCCTGGTATCGGGAC +
Preference number: 4 (lower is better)
Translates to: ICIITSLGHPAGRPVGHRPHRAP*WAWYRD
Trigger: GTCCCGATACCAGGCCCAGCACGGGGCCCTGTGAGG...CCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGCTGACGCTTGCCACCTaGTCCTACCCGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKLTLAT*SYPARM
Trigger: CATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAG...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp GACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGGGCCGCGCCATCGCCTaGCACCTGCCCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DSDSSTSSSACPLWTTARGRAIA*HLPPGS
Trigger: TGAGCCTGGGGGCAGGTGCCAGGCGATGGCGCGGCC...CCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp CCCTGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGCGCTCCCACAGCAGTaGCGCCAACAGACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PCPLVPRGQGGLICGCRPALPQQ*RQQTRG
Trigger: GCCCCGGGTCTGTTGGCGCCACTGCTGTGGGAGCGC...TGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR TCA 90 bp CAGGATCGTGTTAACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTGCCGGGGATGGGGTAGGCCTCAGTaGGTCGGCCGGTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QDRVNGGGGRIGSLTCRGWGRPQ*VGRSGP
Trigger: GGGCCCTGACCGGCCGACTCACTGAGGCCTACCCCA...TCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTTAACACGATCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp TCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGGGTCCCGGGAGATCATaGAATCTGGGCGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SALSRPWGTQLAGPWATGGPGRS*NLGEGV
Trigger: CACCCCCTCGCCCAGATTGCATGATCTCCCGGGACC...CCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp CTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCCTGGGCGGGAGCCCGTaGTCCAGCAGGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LPPSDSPREDSDSSTSSSLGGSP*SSRKAS
Trigger: GGACGCCTTCCTGCTGGAGCACGGGCTCCCGCCCAG...GCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp TCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGACCGAGAGGTCAGGCCTaGGCGGTGGCCGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SSQTFCPSSIRQPAGGLRPRGQA*AVAAGG
Trigger: ACCGCCAGCGGCCACCGCGCAGGCCTGACCTCTCGG...TCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp CCCTGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCACGCAGTCTCCAGGCCTaGCCCAGGGGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PCPLVPRGQGGLICGCRPRSLQA*PRGCGC
Trigger: GCAGCCACAACCCCTGGGCCAGGCCTGGAGACTGCG...TGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGACTCCAGCACTTCCGCCCCGTGCTGGGCCTaGTATCGGGACAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: SALPPSDSPREDSDSSTSAPCWA*YRDSTA
Trigger: CGCCGTGCTGTCCCGATACCAGGCCCAGCACGGGGC...GGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGCCCCGTGCTGGGCCTaGTATCGGGACAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: LSALSRPWGTQLAGPWATAPCWA*YRDSTA
Trigger: CGCCGTGCTGTCCCGATACCAGGCCCAGCACGGGGC...TGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGACGGGACCGCTTGGCTaGCTCGTTGTTCTTGTACCG +
Preference number: 4 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKTGPLG*LVVLVP
Trigger: CGGTACAAGAACAACGAGGCAGCCAAGCGGTCCCGT...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp CTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCCTCACAGGGCCCCGTaGTGGGCCTGGTATCGGGAC +
Preference number: 4 (lower is better)
Translates to: LRLQHFQQRLPSMDDSPEPHRAP*WAWYRD
Trigger: GTCCCGATACCAGGCCCAGCACGGGGCCCTGTGAGG...CTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp AACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTGCCGGGGACACACACAGAGACGCAGTCTCCAGGCCTaGCCCAGGGGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NGGGGRIGSLTCRGHTQRRSLQA*PRGCGC
Trigger: GCAGCCACAACCCCTGGGCCAGGCCTGGAGACTGCG...TCTCTGTGTGTGTCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp CTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCCGTCACGGGACCGCTTaGCTGCCTCGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LHYHVPGAPSWPARGPQGRHGTA*LPRCSC
Trigger: ACAAGAACAACGAGGCAGCCAAGCGGTCCCGTGACG...GCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp ATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCCCGCACCGATATCTaGTTCTCCTTGAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: ICIITSLGHPAGRPVGHRARTDI*FSLSRR
Trigger: CCGGCGGCTCAAGGAGAACCAGATATCGGTGCGGGC...CCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGCCGAGAGGTCAGGCCTaGGCGGTGGCCGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVPRGQA*AVAAGG
Trigger: ACCGCCAGCGGCCACCGCGCAGGCCTGACCTCTCGG...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp GCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGAGCTGCCCACGGGCTaGAGCCAGTATGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ASPHPLRCLHLAGQSAQEELPTG*SQYARE
Trigger: CTCCCTGGCATACTGGCTGCAGCCCGTGGGCAGCTC...CTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGCAAGGTGGGCGAGCCTaGCTCTTGCAAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKQGGRA*LLQNLQ
Trigger: CTGCAGATTTTGCAAGAGCCAGGCTCGCCCACCTTG...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp CTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGGAGAGGCGAAGGGCTaGCCTGCCAGTCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPPSDSPREDSDSSTSSSGEAKG*PASHQH
Trigger: GTGCTGGTGACTGGCAGGCCAGCCCTTCGCCTCTCC...GCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGCAGCTGGCCGGCCCGTaGGCCACAGGGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWQLAGP*ATGQEG
Trigger: CCCTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTG...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGAGTTTGGACGAGTGTCTaGCCAGGGGCGGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGVWTSV*PGAGEC
Trigger: ACACTCGCCCGCCCCTGGGCAGACACTCGTCCAAAC...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp TTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCCCATCGCCTGGCACCTaGCCCCAGGCTCACGGGTTC +
Preference number: 4 (lower is better)
Translates to: LPPAPTRPGWLRAESILRPSPGT*PQAHGF
Trigger: GAACCCGTGAGCCTGGGGGCAGGTGCCAGGCGATGG...GCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp AATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGGCCGCGCCATCGCCTaGCACCTGCCCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NPKEKPRLDCEKRPLPGCGRAIA*HLPPGS
Trigger: TGAGCCTGGGGGCAGGTGCCAGGCGATGGCGCGGCC...ACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp CAGGATCGTGTTAACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTGCCGGGGAAGCTGGCCGGCTCTTTaGGCTTGCTGGTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QDRVNGGGGRIGSLTCRGSWPAL*ACWSPA
Trigger: TGCAGGGGACCAGCAAGCCCAAAGAGCCGGCCAGCT...TCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTTAACACGATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGGGGTCAAAGGTCTCGTaGCCAGGAATGCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKGSKVS*PGMLDR
Trigger: CCTATCAAGCATTCCTGGCCACGAGACCTTTGACCC...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp CAGGATCGTGTTAACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTGCCGGGGAGCCCGCACCGATATCTaGTTCTCCTTGAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QDRVNGGGGRIGSLTCRGARTDI*FSLSRR
Trigger: CCGGCGGCTCAAGGAGAACCAGATATCGGTGCGGGC...TCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTTAACACGATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGAGCATTATCACGTCCCTaGGGCACCCAGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SSQTFCPSSIRQPAGGLRALSRP*GTQLAG
Trigger: GCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGC...TCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp GGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCAGCGCCTGCCCTCTATaGACGACAGCCCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGLRLQHFQQRLPSMDDSSACPL*TTARSC
Trigger: GCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCT...GCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGACAGGCAGGGCCGCCTTaGGCTCCTTTTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGQAGPP*APFPSG
Trigger: TCCTGAAGGAAAAGGAGCGCAAGGCGGCCCTGCCTG...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp CTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCCCCCTGTTCGTCTCATaGGCGTCCTCCGTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: LPPSDSPREDSDSSTSSSPLFVS*ASSVPN
Trigger: ATTGGGGACGGAGGACGCGCATGAGACGAACAGGGG...GCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp CCCTGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCATCCCACATCCAGCTCTaGTCACCTTCTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PCPLVPRGQGGLICGCRPSHIQL*SPSAPP
Trigger: CGGAGGAGCAGAAGGTGAGCAGAGCTGGATGTGGGA...TGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGACCTTCAGGAGACAGCTaGCCGGCTCTTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGPSGDS*PALWAC
Trigger: GCAAGCCCAAAGAGCCGGCCAGCTGTCTCCTGAAGG...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGACCCCCTTGTGCCCCGTaGCCAAGGAGGACTAATCTG +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGPPCAP*PRRTNL
Trigger: CAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGG...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGACGGGCGAGTGTAGCCTaGAACCCTCCAGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGRASVA*NPPVSR
Trigger: TCTGGATACTGGAGGGTTGCAGGCTACACTCGCCCG...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp ATTCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGTTTGGACGAGTGTCTaGCCAGGGGCGGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: IPLRPSALPPSDSPREDSVWTSV*PGAGEC
Trigger: ACACTCGCCCGCCCCTGGGCAGACACTCGTCCAAAC...TGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTCTGGGCGGGAGCCCGTaGTCCAGCAGGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: STNPKEKPRLDCEKRPLPLGGSP*SSRKAS
Trigger: GGACGCCTTCCTGCTGGAGCACGGGCTCCCGCCCAG...AGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp AACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTGCCGGGGACACACACAGAGAATAGGGTCCCTGACGTaGCGGGGACACACACAGAGA +
Preference number: 4 (lower is better)
Translates to: NGGGGRIGSLTCRGHTQRIGSLT*RGHTQR
Trigger: TCTCTGTGTGTGTCCCCGGCACGTCAGGGACCCTAT...TCTCTGTGTGTGTCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGCTCCTTCTACAAGGTaGGCGAGCCTGGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LSALSRPWGTQLAGPWATAPSTR*ASLALA
Trigger: TGCAAGAGCCAGGCTCGCCCACCTTGTAGAAGGAGC...TGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGAGCTCCTTCTACAAGGTaGGCGAGCCTGGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGAPSTR*ASLALA
Trigger: TGCAAGAGCCAGGCTCGCCCACCTTGTAGAAGGAGC...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp CGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTAAGGCTCACGGGTTCATaGAGAGGCGAAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RLPPAPTRPGWLRAESILRLTGS*RGEGLA
Trigger: GGCCAGCCCTTCGCCTCTCCATGAACCCGTGAGCCT...TAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp GACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGCGTCACGGGACCGCTTaGCTGCCTCGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: DSDSSTSSSACPLWTTARRHGTA*LPRCSC
Trigger: ACAAGAACAACGAGGCAGCCAAGCGGTCCCGTGACG...CCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGGCCCCTCCCTGGCTGTaGGGCATGTCTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVAPPWL*GMSPAK
Trigger: CTTGGCTGGAGACATGCCCCACAGCCAGGGAGGGGC...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR TCA 90 bp AATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCAGGGCTCAGTCCTaGCGCTTGCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: NVFICIITSLGHPAGRPVGRAQS*RLPPAP
Trigger: AGGAGCAGGTGGCAAGCGTCAGGACTGAGCCCTGCC...CACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp GGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCGGGCGAGTGTAGCCTaGAACCCTCCAGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: GGLRLQHFQQRLPSMDDSRASVA*NPPVSR
Trigger: TCTGGATACTGGAGGGTTGCAGGCTACACTCGCCCG...GCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTCCATCGCCTGGCACCTaGCCCCAGGCTCACGGGTTC +
Preference number: 4 (lower is better)
Translates to: STNPKEKPRLDCEKRPLPPSPGT*PQAHGF
Trigger: GAACCCGTGAGCCTGGGGGCAGGTGCCAGGCGATGG...AGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp TCATTCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGGCAGGGCCGCCTTaGGCTCCTTTTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SFLSDLLPFLHPTARGRTQAGPP*APFPSG
Trigger: TCCTGAAGGAAAAGGAGCGCAAGGCGGCCCTGCCTG...AGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp TCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGTATTTCTCATCCTTCTaGTCCTCCGGCACCTGGATT +
Preference number: 4 (lower is better)
Translates to: SALSRPWGTQLAGPWATGYFSSF*SSGTWI
Trigger: AATCCAGGTGCCGGAGGAGCAGAAGGATGAGAAATA...CCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp CAGGATCGTGTTAACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTGCCGGGGAACCAGCACACTCCAGTaGTTTGGACGAGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QDRVNGGGGRIGSLTCRGTSTLQ*FGRVSA
Trigger: GGCAGACACTCGTCCAAACCACTGGAGTGTGCTGGT...TCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTTAACACGATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGTGCCTTCTTCATGATTaGCTGGGGCTTAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SALSRPWGTQLAGPWATGCLLHD*LGLKFL
Trigger: GAGGAACTTAAGCCCCAGCCAATCATGAAGAAGGCA...CCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp ATTCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCACCTACCCGGCCAGGATaGCTGAGGGCGGAGTCTATT +
Preference number: 4 (lower is better)
Translates to: IPLRPSALPPSDSPREDSPTRPG*LRAESI
Trigger: AATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGG...TGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR TCA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGCCCGGCCAGGATGGCTaGGGGCGGAGTCTATTTTAC +
Preference number: 4 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWPGQDG*GRSLFY
Trigger: GTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGG...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp ATGGCTGAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGGGCGAAGGGCTGGCCTaGCAGTCACCAGCACACTCC +
Preference number: 4 (lower is better)
Translates to: MAEGGVYFTRRPMTGPGMGEGLA*QSPAHS
Trigger: GGAGTGTGCTGGTGACTGGCAGGCCAGCCCTTCGCC...CATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCCGCCGAACGGCAGCGTaGGCTCCCACAGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLRRTAA*APTAVA
Trigger: CGCCACTGCTGTGGGAGCGCACGCTGCCGTTCGGCG...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp TTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCACGGGACCGCTTGGCTaGCTCGTTGTTCTTGTACCG +
Preference number: 4 (lower is better)
Translates to: LPPAPTRPGWLRAESILRTGPLG*LVVLVP
Trigger: CGGTACAAGAACAACGAGGCAGCCAAGCGGTCCCGT...GCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp CTTCCTCCATCCGACAGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCAGTATGCCAGGGAGCTaGCCTCTTCTTCCACAACAG +
Preference number: 4 (lower is better)
Translates to: LPPSDSPREDSDSSTSSSSMPGS*PLLPQQ
Trigger: CTGTTGTGGAAGAAGAGGGCAGCTCCCTGGCATACT...GCTGCTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGACTTCCAGCAGCGCCTaGCCTCTATGGACGACAGCC +
Preference number: 4 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWTSSSA*PLWTTA
Trigger: GGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGT...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp ATTCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCACCCCATCCACTCCGGTaGCTCCATTTAGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: IPLRPSALPPSDSPREDSPHPLR*LHLAGQ
Trigger: TTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGG...TGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGCTCAGTCCTGACGCTTaGCACCTGCTCCTACCCGGC +
Preference number: 4 (lower is better)
Translates to: NVFICIITSLGHPAGRPVLSPDA*HLLLPG
Trigger: GCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACTGAG...CACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp ATTCCTCTCAGACCTTCTGCCCTTCCTCCATCCGACAGCCCGCGGGAGGACTCACACACTCCAGTGGTTTaGACGAGTGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IPLRPSALPPSDSPREDSHTPVV*TSVCPG
Trigger: CCCTGGGCAGACACTCGTCCAAACCACTGGAGTGTG...TGAGTCCTCCCGCGGGCTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp AGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGAGAGGCGAAGGGCTaGCCTGCCAGTCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: STNPKEKPRLDCEKRPLPGEAKG*PASHQH
Trigger: GTGCTGGTGACTGGCAGGCCAGCCCTTCGCCTCTCC...AGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp CCCTGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCATGCTCCTCCGGCACCTaGATTTTTCTTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PCPLVPRGQGGLICGCRPCSSGT*IFLAFF
Trigger: GAAGAAGGCAAGAAAAATCCAGGTGCCGGAGGAGCA...TGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp ATGGCTGAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGGAGAGCTCCGCCAGGTaGGGATGTGGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: MAEGGVYFTRRPMTGPGMESSAR*GCGAAS
Trigger: TGAGGCTGCCCCACATCCCCACCTGGCGGAGCTCTC...CATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGAAGCCCCCTAAAATGCTaGGATTACACGAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGSPLKC*DYTSEA
Trigger: GGCCTCACTCGTGTAATCCCAGCATTTTAGGGGGCT...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGGAGATCATGCAATCTaGGCGAGGGGGTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LPPAPTRPGWLRAESILRGDHAI*ARGCPD
Trigger: ATCTGGACACCCCCTCGCCCAGATTGCATGATCTCC...GCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp AGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTAGCTGGCCGGCTCTTTaGGCTTGCTGGTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: STNPKEKPRLDCEKRPLPSWPAL*ACWSPA
Trigger: TGCAGGGGACCAGCAAGCCCAAAGAGCCGGCCAGCT...AGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp CCCTGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCATGCCTTCTTCATGATTaGCTGGGGCTTAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PCPLVPRGQGGLICGCRPCLLHD*LGLKFL
Trigger: GAGGAACTTAAGCCCCAGCCAATCATGAAGAAGGCA...TGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp GGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCCAATGACAGGACCTaGAATGTACTGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: GGLRLQHFQQRLPSMDDSPNDRT*NVLAGV
Trigger: TACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGG...GCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGAGGAGGACTAATCTGTaGCTGCAGGCCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVRRTNL*LQARRG
Trigger: GCCTCTCCTGGCCTGCAGCCACAGATTAGTCCTCCT...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGGACCTCAGCCTCCCAAGTaGCTTGTAGAAATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: CPLVPRGQGGLICGCRPGPQPPK*LVEMGF
Trigger: AAACCCCATTTCTACAAGCCACTTGGGAGGCTGAGG...TCCTGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR TCA 90 bp AGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGAGCGACGGGGATTTaGGGTCCTCGGTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: STNPKEKPRLDCEKRPLPGATGI*GPRCRN
Trigger: GTTTCTGCACCGAGGACCTCAAATCCCCGTCGCTCC...AGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR TCA 90 bp GCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGCTTAAGTTCCTCTTCTaGGAAGCGATGTCTTCGAGG +
Preference number: 4 (lower is better)
Translates to: ASPHPLRCLHLAGQSAQELKFLF*EAMSSR
Trigger: CCTCGAAGACATCGCTTCTCAGAAGAGGAACTTAAG...CTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR TCA 90 bp TTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCTTACGCGTCGCCCAATaGCAGGACCTGGAATGTACT +
Preference number: 4 (lower is better)
Translates to: LPPAPTRPGWLRAESILRLRVAQ*QDLECT
Trigger: AGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAA...GCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR TCA 90 bp AATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTCAGGCCAGGAGAGGCTaGGCACTAATCCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: NPKEKPRLDCEKRPLPGCQARRG*ALIPRR
Trigger: TCTCCTTGGGATTAGTGCTCAGCCTCTCCTGGCCTG...ACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCGGCGAAGGGCTGGCCTaGCAGTCACCAGCACACTCC +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLGEGLA*QSPAHS
Trigger: GGAGTGTGCTGGTGACTGGCAGGCCAGCCCTTCGCC...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGTCCTCTCAGACCTTCTaGCCTTCCTCCATCCGACAG +
Preference number: 4 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWSSQTF*PSSIRQ
Trigger: CTGTCGGATGGAGGAAGGGCAGAAGGTCTGAGAGGA...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGGACTAATCTGTGGCTaGAGGCCAGGAGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NPKEKPRLDCEKRPLPGCGLICG*RPGEAE
Trigger: CTCAGCCTCTCCTGGCCTGCAGCCACAGATTAGTCC...ACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGACCAGCACACTCCAGTaGTTTGGACGAGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVTSTLQ*FGRVSA
Trigger: GGCAGACACTCGTCCAAACCACTGGAGTGTGCTGGT...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp AGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGCTCTTTGGGCTTGCTaGTCCCCTGCAGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: STNPKEKPRLDCEKRPLPALWAC*SPAEGS
Trigger: GGAGCCTTCTGCAGGGGACCAGCAAGCCCAAAGAGC...AGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp AATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGTGCCTCCATTTAGCTaGCCAATCAGCCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NVFICIITSLGHPAGRPVVPPFS*PISPGG
Trigger: CCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCAC...CACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR TCA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGGGCCCCTCGCCCAGTTaGCACTGTCTTTATAAACCT +
Preference number: 4 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVGPSPS*HCLYKP
Trigger: AGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCC...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCGGTCCCGGGAGATCATaGAATCTGGGCGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLGPGRS*NLGEGV
Trigger: CACCCCCTCGCCCAGATTGCATGATCTCCCGGGACC...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp AGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCTTGCTGGTCCCCTaGAGAAGGCTCCGCAACCCA +
Preference number: 4 (lower is better)
Translates to: SLFYASPNDRTWNVLAGVGLLVP*RRLRNP
Trigger: TGGGTTGCGGAGCCTTCTGCAGGGGACCAGCAAGCC...TACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCGGCTTGCTGGTCCCCTaGAGAAGGCTCCGCAACCCA +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLGLLVP*RRLRNP
Trigger: TGGGTTGCGGAGCCTTCTGCAGGGGACCAGCAAGCC...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCAGGCTCACGGGTTCATaGAGAGGCGAAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLRLTGS*RGEGLA
Trigger: GGCCAGCCCTTCGCCTCTCCATGAACCCGTGAGCCT...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGGGGTCAAAGGTCTCGTaGCCAGGAATGCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVGSKVS*PGMLDR
Trigger: CCTATCAAGCATTCCTGGCCACGAGACCTTTGACCC...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp GGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCTGCCTTCTTCATGATTaGCTGGGGCTTAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GGLRLQHFQQRLPSMDDSCLLHD*LGLKFL
Trigger: GAGGAACTTAAGCCCCAGCCAATCATGAAGAAGGCA...GCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp GACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGCACAACAGCTGGCTCTaGGGTTCTCAAGATTTATTC +
Preference number: 4 (lower is better)
Translates to: DSDSSTSSSACPLWTTARHNSWL*GSQDLF
Trigger: GAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTG...CCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTGGAGTCTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR TCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCCTTTGCAACCGAGGGTaGGAGGGGACTCAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLLCNRG*EGTQGA
Trigger: AGCGCCTTGAGTCCCCTCTCACCCTCGGTTGCAAAG...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp AATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGGCTCTTGCAAAATCTaGAGCTCTCGCAACGGAAGG +
Preference number: 4 (lower is better)
Translates to: NPKEKPRLDCEKRPLPGCGSCKI*SSRNGR
Trigger: CCTTCCGTTGCGAGAGCTGCAGATTTTGCAAGAGCC...ACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGTCTCGTGGCCAGGAATaGTTGATAGGGCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWSRGQE*LIGQDQ
Trigger: CTGATCTTGCCCTATCAAGCATTCCTGGCCACGAGA...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp GCTGCCCTCTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGGCTCTTTGGGCTTGCTaGTCCCCTGCAGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AALFFHNSWLWGSQDLFRALWAC*SPAEGS
Trigger: GGAGCCTTCTGCAGGGGACCAGCAAGCCCAAAGAGC...CCTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAGAGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGTGCTCCTCCGGCACCTaGATTTTTCTTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWCSSGT*IFLAFF
Trigger: GAAGAAGGCAAGAAAAATCCAGGTGCCGGAGGAGCA...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp AATATAAATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGGCATTATCACGTCCCTaGGGCACCCAGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: NINVFICIITSLGHPAGRALSRP*GTQLAG
Trigger: GCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGC...CCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATTTATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp CGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTATTCTTCCACAACAGCTaGCTCTGGGGTTCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: RLPPAPTRPGWLRAESILFFHNS*LWGSQD
Trigger: ATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAA...TAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp ATGGCTGAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGGGCTCTTGCAAAATCTaGAGCTCTCGCAACGGAAGG +
Preference number: 4 (lower is better)
Translates to: MAEGGVYFTRRPMTGPGMGSCKI*SSRNGR
Trigger: CCTTCCGTTGCGAGAGCTGCAGATTTTGCAAGAGCC...CATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTACTCGGTGCAGAAACGTaGAACTCAAGAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLFYASPNDRTWNVLAGVLGAET*NSRGSR
Trigger: CCGGGACCCTCTTGAGTTGCACGTTTCTGCACCGAG...TACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTTCTCGTGGCCAGGAATaGTTGATAGGGCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: NPKEKPRLDCEKRPLPGCSRGQE*LIGQDQ
Trigger: CTGATCTTGCCCTATCAAGCATTCCTGGCCACGAGA...ACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCCACACTCCAGTGGTTTaGACGAGTGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLHTPVV*TSVCPG
Trigger: CCCTGGGCAGACACTCGTCCAAACCACTGGAGTGTG...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp AGCTGCCCTCTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGCCTTCAGGAGACAGCTaGCCGGCTCTTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: SCPLLPQQLALGFSRFIQPSGDS*PALWAC
Trigger: GCAAGCCCAAAGAGCCGGCCAGCTGTCTCCTGAAGG...CTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAGAGGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CCA 90 bp AATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGTGCTCCTCCGGCACCTaGATTTTTCTTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NVFICIITSLGHPAGRPVCSSGT*IFLAFF
Trigger: GAAGAAGGCAAGAAAAATCCAGGTGCCGGAGGAGCA...CACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR TCA 90 bp AATATAAATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCTTTGCAACCGAGGGTaGGAGGGGACTCAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: NINVFICIITSLGHPAGRLCNRG*EGTQGA
Trigger: AGCGCCTTGAGTCCCCTCTCACCCTCGGTTGCAAAG...CCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATTTATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AATATAAATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGTCACGTGCTGACGCCTaGTTCCCTCCTCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: NINVFICIITSLGHPAGRSRADA*FPPPPF
Trigger: GAAGGGAGGAGGAGGGAAGCAGGCGTCAGCACGTGA...CCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATTTATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599385.5
CDS-3UTR CCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCCAAGGTGGGCGAGCCTaGCTCTTGCAAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLQGGRA*LLQNLQ
Trigger: CTGCAGATTTTGCAAGAGCCAGGCTCGCCCACCTTG...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp TTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCTTCTTCATGATTGGCTaGGGCTTAAGTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPPAPTRPGWLRAESILRFFMIG*GLSSSS
Trigger: AGAAGAGGAACTTAAGCCCCAGCCAATCATGAAGAA...GCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR TCA 90 bp CTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGATCGTGTTGGAGCGACGGGGATTTaGGGTCCTCGGTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLPQQLALGFSRFIQDRVGATGI*GPRCRN
Trigger: GTTTCTGCACCGAGGACCTCAAATCCCCGTCGCTCC...AACACGATCCTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCCTCAAGAGATCCTCCTaGCTCAGCCCCCTAAAATGC +
Preference number: 4 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLLKRSS*LSPLKC
Trigger: GCATTTTAGGGGGCTGAGGCAGGAGGATCTCTTGAG...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CCA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGTTCTTCATGATTGGCTaGGGCTTAAGTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWFFMIG*GLSSSS
Trigger: AGAAGAGGAACTTAAGCCCCAGCCAATCATGAAGAA...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CCA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGTTCTTCATGATTGGCTaGGGCTTAAGTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVFFMIG*GLSSSS
Trigger: AGAAGAGGAACTTAAGCCCCAGCCAATCATGAAGAA...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR GCA 90 bp AATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGATAAATGTATTTATCTaGATTATCACGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NVFICIITSLGHPAGRPVINVFI*IITSLG
Trigger: CCCCAGGGACGTGATAATGCAGATAAATACATTTAT...CACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR GCA 90 bp CTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGATCGTGTTTCTCGTGGCCAGGAATaGTTGATAGGGCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: LLPQQLALGFSRFIQDRVSRGQE*LIGQDQ
Trigger: CTGATCTTGCCCTATCAAGCATTCCTGGCCACGAGA...AACACGATCCTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp CTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGATCGTGTTTATTTCTCATCCTTCTaGTCCTCCGGCACCTGGATT +
Preference number: 4 (lower is better)
Translates to: LLPQQLALGFSRFIQDRVYFSSF*SSGTWI
Trigger: AATCCAGGTGCCGGAGGAGCAGAAGGATGAGAAATA...AACACGATCCTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR GCA 90 bp AGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAATAAATGTATTTATCTaGATTATCACGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLFYASPNDRTWNVLAGVINVFI*IITSLG
Trigger: CCCCAGGGACGTGATAATGCAGATAAATACATTTAT...TACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS GCA 90 bp GGAAGGCGTCCAGGTCTACGTACTCCACATCGCCGAACGGCAGCGTaGGCTCCCACAGCAGTGGCGCCAACAGACCCGGGGCGGGCACCG +
Preference number: 5 (lower is better)
Translates to: GRRPGLRTPHRRTAA*APTAVAPTDPGRAP
Trigger: CGGTGCCCGCCCCGGGTCTGTTGGCGCCACTGCTGTGGGAGCGCACGCTGCCGTTCGGCGATGTGGAGTACGTAGACCTGGACGCCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS-3UTR CAA 90 bp TATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCCACAGGGCAGGAAGGCGTCACGGGACCGCTaGGCTGCCTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: YHVPGAPSWPARGPQGRKASRDR*AASLFL
Trigger: CAAGAACAACGAGGCAGCCAAGCGGTCCCGTGACGC...CTTCCTGCCCTGTGGCCCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS CCA 90 bp GAGGCGAAGGGCTGGCCTGCCAGTCACCAGCACACTCCAGTGGTTTaGACGAGTGTCTGCCCAGGGGCGGGCGAGTGTAGCCTGCAACCC +
Preference number: 5 (lower is better)
Translates to: EAKGWPASHQHTPVV*TSVCPGAGECSLQP
Trigger: GGGTTGCAGGCTACACTCGCCCGCCCCTGGGCAGACACTCGTCCAAACCACTGGAGTGTGCTGGTGACTGGCAGGCCAGCCCTTCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 90 bp CCTGCCCCCAGGCTCACGGGTTCATGGAGAGGCGAAGGGCTGGCCTaGCAGTCACCAGCACACTCCAGTGGTTTGGACGAGTGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PAPRLTGSWRGEGLA*QSPAHSSGLDECLP
Trigger: GGGCAGACACTCGTCCAAACCACTGGAGTGTGCTGGTGACTGGCAGGCCAGCCCTTCGCCTCTCCATGAACCCGTGAGCCTGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS-3UTR CAA 90 bp CCCTGCCCCCTTGTGCCCCGTGGCCAAGGAGGACTAATCTGTGGCTGCAGGCCAGCACACTCCAGTGGTTaGGACGAGTGTCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PCPLVPRGQGGLICGCRPAHSSG*DECLPR
Trigger: CCTGGGCAGACACTCGTCCAAACCACTGGAGTGTGC...TGGCCTGCAGCCACAGATTAGTCCTCCTTGGCCACGGGGCACAAGGGGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CAA 90 bp AACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTGCCGGGGACACACACAGAGAGCGTCACGGGACCGCTaGGCTGCCTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NGGGGRIGSLTCRGHTQRASRDR*AASLFL
Trigger: CAAGAACAACGAGGCAGCCAAGCGGTCCCGTGACGC...TCTCTGTGTGTGTCCCCGGCACGTCAGGGACCCTATCCTCCCACCGCCTCCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS TCA 90 bp CGAGGGGGTGTCCAGATCAAGCGGTCGGCTCTTTGCAACCGAGGGTaGGAGGGGACTCAAGGCGCTCCTTCTACAAGGTGGGCGAGCCTG +
Preference number: 5 (lower is better)
Translates to: RGGVQIKRSALCNRG*EGTQGAPSTRWASL
Trigger: CAGGCTCGCCCACCTTGTAGAAGGAGCGCCTTGAGTCCCCTCTCACCCTCGGTTGCAAAGAGCCGACCGCTTGATCTGGACACCCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000601104.1
CDS GCA 90 bp TGGCCTGCCAGTCACCAGCACACTCCAGTGGTTTGGACGAGTGTCTaGCCAGGGGCGGGCGAGTGTAGCCTGCAACCCTCCAGTATCCAG +
Preference number: 5 (lower is better)
Translates to: WPASHQHTPVVWTSV*PGAGECSLQPSSIQ
Trigger: CTGGATACTGGAGGGTTGCAGGCTACACTCGCCCGCCCCTGGGCAGACACTCGTCCAAACCACTGGAGTGTGCTGGTGACTGGCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 90 bp CCCGGAGGTCGGACCTGGAGCAGGTGTGCCCAGGAATCCCCGACCTaGAGTCCGTCCCTGGAGACCTCAATGTGCCCAAAGGGAAACATC +
Preference number: 5 (lower is better)
Translates to: PGGRTWSRCAQESPT*SPSLETSMCPKGNI
Trigger: GATGTTTCCCTTTGGGCACATTGAGGTCTCCAGGGACGGACTGCAGGTCGGGGATTCCTGGGCACACCTGCTCCAGGTCCGACCTCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS-3UTR CAA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCAGGCAGGGCCGCCTaGCGCTCCTTTTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWAGRAA*RSFSFR
Trigger: CCTGAAGGAAAAGGAGCGCAAGGCGGCCCTGCCTGC...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS GCA 90 bp CAGTGGTTTGGACGAGTGTCTGCCCAGGGGCGGGCGAGTGTAGCCTaGAACCCTCCAGTATCCAGAACGCTGCAAATCCTAGGAGCGACG +
Preference number: 5 (lower is better)
Translates to: QWFGRVSAQGRASVA*NPPVSRTLQILGAT
Trigger: CGTCGCTCCTAGGATTTGCAGCGTTCTGGATACTGGAGGGTTGCAGGCTACACTCGCCCGCCCCTGGGCAGACACTCGTCCAAACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 90 bp TCCAGTCACTTAGTTCCACTCAACCTCCAAAGATTCCCAACCCCCTaGTCTCCGGGGAGCATCGGCCTCCTGGACCTTCCCAGAACCCCC +
Preference number: 5 (lower is better)
Translates to: SSHLVPLNLQRFPTP*SPGSIGLLDLPRTP
Trigger: GGGGGTTCTGGGAAGGTCCAGGAGGCCGATGCTCCCCGGAGAGCAGGGGGTTGGGAATCTTTGGAGGTTGAGTGGAACTAAGTGACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS-3UTR CAA 90 bp AATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGCGCTTGGCTGCCTCGTaGTTCTTGTACCGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: NVFICIITSLGHPAGRPVRLAAS*FLYRRL
Trigger: GAGCCGGCGGTACAAGAACAACGAGGCAGCCAAGCG...CACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS GCA 90 bp AGGCGCTCCTTCTACAAGGTGGGCGAGCCTGGCTCTTGCAAAATCTaGAGCTCTCGCAACGGAAGGCGCTTTGCAATCTGCACCGAGAGG +
Preference number: 5 (lower is better)
Translates to: RRSFYKVGEPGSCKI*SSRNGRRFAICTER
Trigger: CCTCTCGGTGCAGATTGCAAAGCGCCTTCCGTTGCGAGAGCTGCAGATTTTGCAAGAGCCAGGCTCGCCCACCTTGTAGAAGGAGCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS GCA 90 bp GGGGACTCAAGGCGCTCCTTCTACAAGGTGGGCGAGCCTGGCTCTTaGAAAATCTGCAGCTCTCGCAACGGAAGGCGCTTTGCAATCTGC +
Preference number: 5 (lower is better)
Translates to: GDSRRSFYKVGEPGS*KICSSRNGRRFAIC
Trigger: GCAGATTGCAAAGCGCCTTCCGTTGCGAGAGCTGCAGATTTTGCAAGAGCCAGGCTCGCCCACCTTGTAGAAGGAGCGCCTTGAGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS GCA 90 bp TCCTCGGTGCAGAAACGTGCAACTCAAGAGGGTCCCGGGAGATCATaGAATCTGGGCGAGGGGGTGTCCAGATCAAGCGGTCGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: SSVQKRATQEGPGRS*NLGEGVSRSSGRLF
Trigger: AAAGAGCCGACCGCTTGATCTGGACACCCCCTCGCCCAGATTGCATGATCTCCCGGGACCCTCTTGAGTTGCACGTTTCTGCACCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS-3UTR CAA 90 bp AATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGGGCGAGCCTGGCTCTaGCAAAATCTGCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: NPKEKPRLDCEKRPLPGCGRAWL*QNLQLS
Trigger: CGAGAGCTGCAGATTTTGCAAGAGCCAGGCTCGCCC...ACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CAA 90 bp AGCACTAATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTCAAGCGGTCGGCTCTTaGCAACCGAGGGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: STNPKEKPRLDCEKRPLPQAVGS*QPRVRG
Trigger: CCCTCTCACCCTCGGTTGCAAAGAGCCGACCGCTTG...AGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGATTAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CAA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGAGGAGCGACGGGGATTaGAGGTCCTCGGTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWRSDGD*RSSVQK
Trigger: TTTCTGCACCGAGGACCTCAAATCCCCGTCGCTCCT...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CAA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCCAGCTGGCCGGCTCTTaGGGCTTGCTGGTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLQLAGS*GLLVPC
Trigger: GCAGGGGACCAGCAAGCCCAAAGAGCCGGCCAGCTG...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CAA 90 bp ATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGGCTGCCTCGTTGTTCTaGTACCGCCGGCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: MYLSALSRPWGTQLAGPWAASLF*YRRLQY
Trigger: ATACTGGAGCCGGCGGTACAAGAACAACGAGGCAGC...CCACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS-3UTR CAA 90 bp ATCCCAAGGAGAAGCCCAGGCTTGACTGTGAGAAAAGGCCCCTCCCTGGCTGTGTTGCCCAGGCTGGTCTaGAACTCCCGAGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: IPRRSPGLTVRKGPSLAVLPRLV*NSRAQE
Trigger: CTCTTGAGCTCGGGAGTTCAAGACCAGCCTGGGCAA...CACAGCCAGGGAGGGGCCTTTTCTCACAGTCAAGCCTGGGCTTCTCCTTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS TCA 90 bp CCTCCAGTATCCAGAACGCTGCAAATCCTAGGAGCGACGGGGATTTaGGGTCCTCGGTGCAGAAACGTGCAACTCAAGAGGGTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: PPVSRTLQILGATGI*GPRCRNVQLKRVPG
Trigger: TCCCGGGACCCTCTTGAGTTGCACGTTTCTGCACCGAGGACCTCAAATCCCCGTCGCTCCTAGGATTTGCAGCGTTCTGGATACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS-3UTR CAA 90 bp TGGGATTACACGAGTGAGGCCCCTCGCCCAGTTGACACTGTCTTTATAAACCTCGCAGGCAGGGCCGCCTaGCGCTCCTTTTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WDYTSEAPRPVDTVFINLAGRAA*RSFSFR
Trigger: CCTGAAGGAAAAGGAGCGCAAGGCGGCCCTGCCTGC...GAGGTTTATAAAGACAGTGTCAACTGGGCGAGGGGCCTCACTCGTGTAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601104.1
CDS-3UTR CAA 90 bp AATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCCCGTGGCTGCCTCGTTGTTCTaGTACCGCCGGCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: NVFICIITSLGHPAGRPVAASLF*YRRLQY
Trigger: ATACTGGAGCCGGCGGTACAAGAACAACGAGGCAGC...CACGGGCCGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS TCA 90 bp TGTTCCCTAGCAACAAGGCCTTCATGGTCTGAGGGCTTCTCCCAATaGAGAGCACTGCCCTGCCCTGCACATTGCCTTTCCAGATCCTGG +
Preference number: 5 (lower is better)
Translates to: CSLATRPSWSEGFSQ*RALPCPAHCLSRSW
Trigger: CCAGGATCTGGAAAGGCAATGTGCAGGGCAGGGCAGTGCTCTTCATTGGGAGAAGCCCTCAGACCATGAAGGCCTTGTTGCTAGGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 90 bp CTGTGGGGCATGTCTCCAGCCAAGTCTATCTCCCACATCCAGCTCTaGTCACCTTCTGCTCCTCCGGCACCTGGATTTTTCTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: LWGMSPAKSISHIQL*SPSAPPAPGFFLPS
Trigger: AGAAGGCAAGAAAAATCCAGGTGCCGGAGGAGCAGAAGGTGAGCAGAGCTGGATGTGGGAGATAGACTTGGCTGGAGACATGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594723.1
ENST00000601104.1
CDS-3UTR CAA 90 bp GCTGCCCTCTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGGGGCGAGCCTGGCTCTaGCAAAATCTGCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: AALFFHNSWLWGSQDLFRGRAWL*QNLQLS
Trigger: CGAGAGCTGCAGATTTTGCAAGAGCCAGGCTCGCCC...CCTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAGAGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CAA 90 bp AGCTGCCCTCTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGCAAGCGGTCGGCTCTTaGCAACCGAGGGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: SCPLLPQQLALGFSRFIQQAVGS*QPRVRG
Trigger: CCCTCTCACCCTCGGTTGCAAAGAGCCGACCGCTTG...CTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAGAGGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS-3UTR CAA 90 bp CTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGATCGTGTTCAGCTGGCCGGCTCTTaGGGCTTGCTGGTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: LLPQQLALGFSRFIQDRVQLAGS*GLLVPC
Trigger: GCAGGGGACCAGCAAGCCCAAAGAGCCGGCCAGCTG...AACACGATCCTGAATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS TCA 90 bp GGCCTTGAACTGAGGCCAGAGAATAGCCTCCTCCCCAGTAGGACCTaGCTGAGAGAAGAGCTGTCTCTTAGGAAAGGGGACTATCCTGAG +
Preference number: 5 (lower is better)
Translates to: GLELRPENSLLPSRT*LREELSLRKGDYPE
Trigger: CTCAGGATAGTCCCCTTTCCTAAGAGACAGCTCTTCTCTCAGTCAGGTCCTACTGGGGAGGAGGCTATTCTCTGGCCTCAGTTCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 90 bp AAATCACCCCAAATCAGAAAGTGGCACTGGCTGCTAACAGAAGCCTaGAGTCTCCCACCAGTGAGAAGTCCAGGCCCAGGAAACAAGGCC +
Preference number: 5 (lower is better)
Translates to: KSPQIRKWHWLLTEA*SLPPVRSPGPGNKA
Trigger: GGCCTTGTTTCCTGGGCCTGGACTTCTCACTGGTGGGAGACTTCAGGCTTCTGTTAGCAGCCAGTGCCACTTTCTGATTTGGGGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 90 bp CCTGCACATTGCCTTTCCAGATCCTGGTTGCTAAGGAAAGCTTGGTaGCCTGGTGATGGGGTTTGGTGTCCCATAAAATCCTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PAHCLSRSWLLRKAW*PGDGVWCPIKSSQS
Trigger: GCTCTGCGAGGATTTTATGGGACACCAAACCCCATCACCAGGGCACCAAGCTTTCCTTAGCAACCAGGATCTGGAAAGGCAATGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS-3UTR CAA 90 bp AAATATAAATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGCGCTTGGCTGCCTCGTaGTTCTTGTACCGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: KYKCIYLHYHVPGAPSWPRLAAS*FLYRRL
Trigger: GAGCCGGCGGTACAAGAACAACGAGGCAGCCAAGCG...CGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATTTATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000599385.5
CDS TCA 90 bp GACCTGGTTGCCAAGGCAACCTCATCCATCCTTGGCAAACAAAAGTaGGGTCTAAGTGGTTTCAATGACTGTGGCCAGCCTCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: DLVAKATSSILGKQK*GLSGFNDCGQPLTC
Trigger: GCAGGTCAGAGGCTGGCCACAGTCATTGAAACCACTTAGACCTCACTTTTGTTTGCCAAGGATGGATGAGGTTGCCTTGGCAACCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS-3UTR CAA 90 bp AAATATAAATGTATTTATCTGCATTATCACGTCCCTGGGGCACCCAGCTGGCCGGCACACTCCAGTGGTTaGGACGAGTGTCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: KYKCIYLHYHVPGAPSWPAHSSG*DECLPR
Trigger: CCTGGGCAGACACTCGTCCAAACCACTGGAGTGTGC...CGGCCAGCTGGGTGCCCCAGGGACGTGATAATGCAGATAAATACATTTATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS TCA 90 bp TCAGAGATCAAAGGCCTGCTGAGTAAGGAGAGACAGGCCACAGGCTaGTATCCCATTGCCAAAGGAAGACTGTCCTTTGCAAGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: SEIKGLLSKERQATG*YPIAKGRLSFASVP
Trigger: AGGCACACTTGCAAAGGACAGTCTTCCTTTGGCAATGGGATATCAGCCTGTGGCCTGTCTCTCCTTACTCAGCAGGCCTTTGATCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 90 bp GCAATCACTCCAAAGGAAGTCCCACATCAGAGATCAAAGGCCTGCTaGGTAAGGAGAGACAGGCCACAGGCTGATATCCCATTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: AITPKEVPHQRSKAC*VRRDRPQADIPLPK
Trigger: CTTTGGCAATGGGATATCAGCCTGTGGCCTGTCTCTCCTTACTCAGCAGGCCTTTGATCTCTGATGTGGGACTTCCTTTGGAGTGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 90 bp GAAACAAGGCCTAAAGGGGCTGGCACAGTCTTCATCCTAGCCAAATaGAATCACTCCAAAGGAAGTCCCACATCAGAGATCAAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: ETRPKGAGTVFILAK*NHSKGSPTSEIKGL
Trigger: CAGGCCTTTGATCTCTGATGTGGGACTTCCTTTGGAGTGATTGCATTTGGCTAGGATGAAGACTGTGCCAGCCCCTTTAGGCCTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 90 bp GTCCCTGGAGACCTCAATGTGCCCAAAGGGAAACATCTTTCCTCTTaGTCTTCCAGTCACTTAGTTCCACTCAACCTCCAAAGATTCCCA +
Preference number: 5 (lower is better)
Translates to: VPGDLNVPKGKHLSS*SSSHLVPLNLQRFP
Trigger: TGGGAATCTTTGGAGGTTGAGTGGAACTAAGTGACTGGAAGAGCAAGAGGAAAGATGTTTCCCTTTGGGCACATTGAGGTCTCCAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 90 bp GGAAGACTCCTCCTTAGTAACCAAGGACCACGGGGCTCAGAAAGATaGTCTCTACTCCACTATTTAATTAAAGCCCAGTTCCTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: GRLLLSNQGPRGSER*SLLHYLIKAQFLLV
Trigger: CACAAGCAGGAACTGGGCTTTAATTAAATAGTGGAGTAGAGAGCATCTTTCTGAGCCCCGTGGTCCTTGGTTACTAAGGAGGAGTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp GCCGGGGTCCTGTCGCTCACAGGCCGCGCCATCGCCTaGCACCTGCCCCCAGGCTCACGGGTTCATGGAGAG +
Preference number: 6 (lower is better)
Translates to: AGVLSLTGRAIA*HLPPGSRVHGE
Trigger: CTCTCCATGAACCCGTGAGCCTGGGGGCAGGTGCCAGGCGATGGCGCGGCCTGTGAGCGACAGGACCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CCA 72 bp TGGCGCAGGAATGTGCCGCTGGGAAGGGTAGGGCCCTaGTTCGGCCCGGAGGTCGGACCTGGAGCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: WRRNVPLGRVGP*FGPEVGPGAGV
Trigger: CACACCTGCTCCAGGTCCGACCTCCGGGCCGAACCAGGGCCCTACCCTTCCCAGCGGCACATTCCTGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp TGCGCGAAGCGCGGAGGAGGGATGGGAGGACTCACGTaGCGCAGGAATGTGCCGCTGGGAAGGGTAGGGCCC +
Preference number: 6 (lower is better)
Translates to: CAKRGGGMGGLT*RRNVPLGRVGP
Trigger: GGGCCCTACCCTTCCCAGCGGCACATTCCTGCGCCACGTGAGTCCTCCCATCCCTCCTCCGCGCTTCGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CAA 90 bp GTCTCCAGGCCTGGCCCAGGGGTTGTGGCTGCAGGCAGGGCCGCCTaGCGCTCCTTTTCCTTCAGGAGACAGCTGGCCGGCTCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: VSRPGPGVVAAGRAA*RSFSFRRQLAGSLG
Trigger: GCCCAAAGAGCCGGCCAGCTGTCTCCTGAAGGAAAAGGAGCGCAAGGCGGCCCTGCCTGCAGCCACAACCCCTGGGCCAGGCCTGGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 72 bp AGACAGCTGGCCGGCTCTTTGGGCTTGCTGGTCCCCTaGAGAAGGCTCCGCAACCCAAGCAGCGCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: RQLAGSLGLLVP*RRLRNPSSAPP
Trigger: CGGGGGAGCGCTGCTTGGGTTGCGGAGCCTTCTGCAGGGGACCAGCAAGCCCAAAGAGCCGGCCAGCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 72 bp CCAGGTCTACGTACTCCACATCGCCGAACGGCAGCGTaGGCTCCCACAGCAGTGGCGCCAACAGACCCGGGG +
Preference number: 6 (lower is better)
Translates to: PGLRTPHRRTAA*APTAVAPTDPG
Trigger: CCCCGGGTCTGTTGGCGCCACTGCTGTGGGAGCGCACGCTGCCGTTCGGCGATGTGGAGTACGTAGACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CCA 72 bp CATCGCCTGGCACCTGCCCCCAGGCTCACGGGTTCATaGAGAGGCGAAGGGCTGGCCTGCCAGTCACCAGCA +
Preference number: 6 (lower is better)
Translates to: HRLAPAPRLTGS*RGEGLACQSPA
Trigger: TGCTGGTGACTGGCAGGCCAGCCCTTCGCCTCTCCATGAACCCGTGAGCCTGGGGGCAGGTGCCAGGCGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CCA 72 bp GTAAGTCTCAGCAAGGCGGAGGAGAGCTCCGCCAGGTaGGGATGTGGGGCAGCCTCACAGGGCCCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: VSLSKAEESSAR*GCGAASQGPVL
Trigger: CAGCACGGGGCCCTGTGAGGCTGCCCCACATCCCCACCTGGCGGAGCTCTCCTCCGCCTTGCTGAGACTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222122.10
ENST00000593500.1
ENST00000594723.1
ENST00000599385.5
CDS CCA 72 bp AAGGGTAGGGCCCTGGTTCGGCCCGGAGGTCGGACCTaGAGCAGGTGTGCCCAGGAATCCCCGACCTGCAGT +
Preference number: 6 (lower is better)
Translates to: KGRALVRPGGRT*SRCAQESPTCS
Trigger: ACTGCAGGTCGGGGATTCCTGGGCACACCTGCTCCAGGTCCGACCTCCGGGCCGAACCAGGGCCCTACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp GGCTGGCCTGCCAGTCACCAGCACACTCCAGTGGTTTaGACGAGTGTCTGCCCAGGGGCGGGCGAGTGTAGC +
Preference number: 6 (lower is better)
Translates to: GWPASHQHTPVV*TSVCPGAGECS
Trigger: GCTACACTCGCCCGCCCCTGGGCAGACACTCGTCCAAACCACTGGAGTGTGCTGGTGACTGGCAGGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CCA 72 bp CGAAGGGCTGGCCTGCCAGTCACCAGCACACTCCAGTaGTTTGGACGAGTGTCTGCCCAGGGGCGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: RRAGLPVTSTLQ*FGRVSAQGRAS
Trigger: ACTCGCCCGCCCCTGGGCAGACACTCGTCCAAACCACTGGAGTGTGCTGGTGACTGGCAGGCCAGCCCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CCA 72 bp TCATCAACACCTCCACGGTGTCTGGGTCCACAGGGCTaGGTGTGTCCCGAGAGGTCAGGCCTGCGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: SSTPPRCLGPQG*VCPERSGLRGG
Trigger: GCCACCGCGCAGGCCTGACCTCTCGGGACACACCCAGCCCTGTGGACCCAGACACCGTGGAGGTGTTGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000601104.1
CDS CAA 72 bp TGGTTCTCCTTGAGCCGCCGGGCGTCACGGGACCGCTaGGCTGCCTCGTTGTTCTTGTACCGCCGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: WFSLSRRASRDR*AASLFLYRRLQ
Trigger: CTGGAGCCGGCGGTACAAGAACAACGAGGCAGCCAAGCGGTCCCGTGACGCCCGGCGGCTCAAGGAGAACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222122.10
ENST00000593500.1
ENST00000594723.1
ENST00000599385.5
CDS CCA 72 bp CCCCCAGGCTCACGGGTTCATGGAGAGGCGAAGGGCTaGCCTGCCAGTCACCAGCACACTCCAGTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: PPGSRVHGEAKG*PASHQHTPVVW
Trigger: CCAAACCACTGGAGTGTGCTGGTGACTGGCAGGCCAGCCCTTCGCCTCTCCATGAACCCGTGAGCCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CAA 72 bp TGGGCGAGGGGGTGTCCAGATCAAGCGGTCGGCTCTTaGCAACCGAGGGTGAGAGGGGACTCAAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: WARGCPDQAVGS*QPRVRGDSRRS
Trigger: GGAGCGCCTTGAGTCCCCTCTCACCCTCGGTTGCAAAGAGCCGACCGCTTGATCTGGACACCCCCTCGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 72 bp CTCCTTGAGCCGCCGGGCGTCACGGGACCGCTTGGCTaGCTCGTTGTTCTTGTACCGCCGGCTCCAGTATTT +
Preference number: 6 (lower is better)
Translates to: LLEPPGVTGPLG*LVVLVPPAPVF
Trigger: AAATACTGGAGCCGGCGGTACAAGAACAACGAGGCAGCCAAGCGGTCCCGTGACGCCCGGCGGCTCAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222122.10
ENST00000593500.1
ENST00000594723.1
ENST00000599385.5
CDS CCA 72 bp CGAATCTGGCCCCCTCCCACGACACCTCTCGACAACTaGACACAGAATTCGAGGCCGCAGCCAGGTCCCACG +
Preference number: 6 (lower is better)
Translates to: RIWPPPTTPLDN*TQNSRPQPGPT
Trigger: CGTGGGACCTGGCTGCGGCCTCGAATTCTGTGTCCAGTTGTCGAGAGGTGTCGTGGGAGGGGGCCAGATTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 72 bp AGGCTCACGGGTTCATGGAGAGGCGAAGGGCTGGCCTaGCAGTCACCAGCACACTCCAGTGGTTTGGACGAG +
Preference number: 6 (lower is better)
Translates to: RLTGSWRGEGLA*QSPAHSSGLDE
Trigger: CTCGTCCAAACCACTGGAGTGTGCTGGTGACTGGCAGGCCAGCCCTTCGCCTCTCCATGAACCCGTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CCA 72 bp TCATCAACACCTCCACGGTGTCTGGGTCCACAGGGCTaGGTGTGTCCCGAGAGGTCAGGCCGAATCCACGAC +
Preference number: 6 (lower is better)
Translates to: SSTPPRCLGPQG*VCPERSGRIHD
Trigger: GTCGTGGATTCGGCCTGACCTCTCGGGACACACCCAGCCCTGTGGACCCAGACACCGTGGAGGTGTTGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593500.1
CDS GCA 72 bp GGACGAGTGTCTGCCCAGGGGCGGGCGAGTGTAGCCTaGAACCCTCCAGTATCCAGAACGCTGCAAATCCTA +
Preference number: 6 (lower is better)
Translates to: GRVSAQGRASVA*NPPVSRTLQIL
Trigger: TAGGATTTGCAGCGTTCTGGATACTGGAGGGTTGCAGGCTACACTCGCCCGCCCCTGGGCAGACACTCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 72 bp GCAGCACGCCCCACTGGGGGACCCAGGGACCTGGGCTaGCAGTCTCTTATGTCCTGGGTAAACAGAATTCTG +
Preference number: 6 (lower is better)
Translates to: AARPTGGPRDLG*QSLMSWVNRIL
Trigger: CAGAATTCTGTTTACCCAGGACATAAGAGACTGGCAGCCCAGGTCCCTGGGTCCCCCAGTGGGGCGTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp GTGCAACTCAAGAGGGTCCCGGGAGATCATGCAATCTaGGCGAGGGGGTGTCCAGATCAAGCGGTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: VQLKRVPGDHAI*ARGCPDQAVGS
Trigger: AGAGCCGACCGCTTGATCTGGACACCCCCTCGCCCAGATTGCATGATCTCCCGGGACCCTCTTGAGTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CAA 90 bp CATGCAATCTGGGCGAGGGGGTGTCCAGATCAAGCGGTCGGCTCTTaGCAACCGAGGGTGAGAGGGGACTCAAGGCGCTCCTTCTACAAG +
Preference number: 6 (lower is better)
Translates to: HAIWARGCPDQAVGS*QPRVRGDSRRSFYK
Trigger: CTTGTAGAAGGAGCGCCTTGAGTCCCCTCTCACCCTCGGTTGCAAAGAGCCGACCGCTTGATCTGGACACCCCCTCGCCCAGATTGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS TCA 72 bp GTCCAGATCAAGCGGTCGGCTCTTTGCAACCGAGGGTaGGAGGGGACTCAAGGCGCTCCTTCTACAAGGTGG +
Preference number: 6 (lower is better)
Translates to: VQIKRSALCNRG*EGTQGAPSTRW
Trigger: CCACCTTGTAGAAGGAGCGCCTTGAGTCCCCTCTCACCCTCGGTTGCAAAGAGCCGACCGCTTGATCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 72 bp TTAGTTCCACTCAACCTCCAAAGATTCCCAACCCCCTaGTCTCCGGGGAGCATCGGCCTCCTGGACCTTCCC +
Preference number: 6 (lower is better)
Translates to: LVPLNLQRFPTP*SPGSIGLLDLP
Trigger: GGGAAGGTCCAGGAGGCCGATGCTCCCCGGAGAGCAGGGGGTTGGGAATCTTTGGAGGTTGAGTGGAACTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CAA 90 bp CCCTCCAGTATCCAGAACGCTGCAAATCCTAGGAGCGACGGGGATTaGAGGTCCTCGGTGCAGAAACGTGCAACTCAAGAGGGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: PSSIQNAANPRSDGD*RSSVQKRATQEGPG
Trigger: CCCGGGACCCTCTTGAGTTGCACGTTTCTGCACCGAGGACCTCAAATCCCCGTCGCTCCTAGGATTTGCAGCGTTCTGGATACTGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CAA 90 bp AGGGGACTCAAGGCGCTCCTTCTACAAGGTGGGCGAGCCTGGCTCTaGCAAAATCTGCAGCTCTCGCAACGGAAGGCGCTTTGCAATCTG +
Preference number: 6 (lower is better)
Translates to: RGLKALLLQGGRAWL*QNLQLSQRKALCNL
Trigger: CAGATTGCAAAGCGCCTTCCGTTGCGAGAGCTGCAGATTTTGCAAGAGCCAGGCTCGCCCACCTTGTAGAAGGAGCGCCTTGAGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222122.10
CDS TCA 72 bp TCCAAGTCTCTCCTCCCCCATGGATCCATTGGTCCCTaGCCCATTAAGAGACACCGAATCTGGCCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: SKSLLPHGSIGP*PIKRHRIWPPP
Trigger: GGGAGGGGGCCAGATTCGGTGTCTCTTAATGGGTCAGGGACCAATGGATCCATGGGGGAGGAGAGACTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp GGACTCAAGGCGCTCCTTCTACAAGGTGGGCGAGCCTaGCTCTTGCAAAATCTGCAGCTCTCGCAACGGAAG +
Preference number: 6 (lower is better)
Translates to: GLKALLLQGGRA*LLQNLQLSQRK
Trigger: CTTCCGTTGCGAGAGCTGCAGATTTTGCAAGAGCCAGGCTCGCCCACCTTGTAGAAGGAGCGCCTTGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000601104.1
CDS CCA 72 bp GGTGTGCCCAGGAATCCCCGACCTGCAGTCCGTCCCTaGAGACCTCAATGTGCCCAAAGGGAAACATCTTTC +
Preference number: 6 (lower is better)
Translates to: GVPRNPRPAVRP*RPQCAQRETSF
Trigger: GAAAGATGTTTCCCTTTGGGCACATTGAGGTCTCCAGGGACGGACTGCAGGTCGGGGATTCCTGGGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CAA 72 bp AAGGCGCTCCTTCTACAAGGTGGGCGAGCCTGGCTCTaGCAAAATCTGCAGCTCTCGCAACGGAAGGCGCTT +
Preference number: 6 (lower is better)
Translates to: KALLLQGGRAWL*QNLQLSQRKAL
Trigger: AAGCGCCTTCCGTTGCGAGAGCTGCAGATTTTGCAAGAGCCAGGCTCGCCCACCTTGTAGAAGGAGCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222122.10
ENST00000601104.1
CDS CAA 72 bp GTCCACAGGGCTGGGTGTGTCCCGAGAGGTCAGGCCTaGGGGAAACAGCACGTGTCAGCTGAGTGTGTATTT +
Preference number: 6 (lower is better)
Translates to: VHRAGCVPRGQA*GKQHVSAECVF
Trigger: AAATACACACTCAGCTGACACGTGCTGTTTCCCCAAGGCCTGACCTCTCGGGACACACCCAGCCCTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 72 bp GCAACAAGGCCTTCATGGTCTGAGGGCTTCTCCCAATaGAGAGCACTGCCCTGCCCTGCACATTGCCTTTCC +
Preference number: 6 (lower is better)
Translates to: ATRPSWSEGFSQ*RALPCPAHCLS
Trigger: GGAAAGGCAATGTGCAGGGCAGGGCAGTGCTCTTCATTGGGAGAAGCCCTCAGACCATGAAGGCCTTGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 72 bp GGATGCTTGTTCCCTAGCAACAAGGCCTTCATGGTCTaGGGGCTTCTCCCAATGAAGAGCACTGCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: GCLFPSNKAFMV*GLLPMKSTALP
Trigger: GGGCAGGGCAGTGCTCTTCATTGGGAGAAGCCCTCAGACCATGAAGGCCTTGTTGCTAGGGAACAAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 72 bp GAGCGACGGGGATTTGAGGTCCTCGGTGCAGAAACGTaGAACTCAAGAGGGTCCCGGGAGATCATGCAATCT +
Preference number: 6 (lower is better)
Translates to: ERRGFEVLGAET*NSRGSREIMQS
Trigger: AGATTGCATGATCTCCCGGGACCCTCTTGAGTTGCACGTTTCTGCACCGAGGACCTCAAATCCCCGTCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS GCA 72 bp ACACCAGGTCTCTGCTGGGATAGGTACCCAAGGGTCTaGCTTTCTAGGGCCCTGGTTGCTAAGGAGATTGGG +
Preference number: 6 (lower is better)
Translates to: TPGLCWDRYPRV*LSRALVAKEIG
Trigger: CCCAATCTCCTTAGCAACCAGGGCCCTAGAAAGGCAGACCCTTGGGTACCTATCCCAGCAGAGACCTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 72 bp TCCAGAACGCTGCAAATCCTAGGAGCGACGGGGATTTaGGGTCCTCGGTGCAGAAACGTGCAACTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: SRTLQILGATGI*GPRCRNVQLKR
Trigger: CCTCTTGAGTTGCACGTTTCTGCACCGAGGACCTCAAATCCCCGTCGCTCCTAGGATTTGCAGCGTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS TCA 72 bp CTGAGGCCAGAGAATAGCCTCCTCCCCAGTAGGACCTaGCTGAGAGAAGAGCTGTCTCTTAGGAAAGGGGAC +
Preference number: 6 (lower is better)
Translates to: LRPENSLLPSRT*LREELSLRKGD
Trigger: GTCCCCTTTCCTAAGAGACAGCTCTTCTCTCAGTCAGGTCCTACTGGGGAGGAGGCTATTCTCTGGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 72 bp TCCCCGACCTGCAGTCCGTCCCTGGAGACCTCAATGTaGCCAAAGGGAAACATCTTTCCTCTTGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: SPTCSPSLETSM*PKGNIFPLALP
Trigger: TGGAAGAGCAAGAGGAAAGATGTTTCCCTTTGGGCACATTGAGGTCTCCAGGGACGGACTGCAGGTCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp TCCCTAGCAACAGGGCCCTCTAGAAGGAGAAACCACTaGTGTAGATCTGACTTCCAGGCCAGTCCTAGGTGC +
Preference number: 6 (lower is better)
Translates to: SLATGPSRRRNH*CRSDFQASPRC
Trigger: GCACCTAGGACTGGCCTGGAAGTCAGATCTACACCAGTGGTTTCTCCTTCTAGAGGGCCCTGTTGCTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp CCCATAAAATCCTCGCAGAGCTGGGGCCTTCTGACCTaGTTGCCAAGGCAACCTCATCCATCCTTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: PIKSSQSWGLLT*LPRQPHPSLAN
Trigger: GTTTGCCAAGGATGGATGAGGTTGCCTTGGCAACCAGGTCAGAAGGCCCCAGCTCTGCGAGGATTTTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 72 bp CAAATCAGAAAGTGGCACTGGCTGCTAACAGAAGCCTaGAGTCTCCCACCAGTGAGAAGTCCAGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: QIRKWHWLLTEA*SLPPVRSPGPG
Trigger: TCCTGGGCCTGGACTTCTCACTGGTGGGAGACTTCAGGCTTCTGTTAGCAGCCAGTGCCACTTTCTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CAA 72 bp ATCCAGAACGCTGCAAATCCTAGGAGCGACGGGGATTaGAGGTCCTCGGTGCAGAAACGTGCAACTCAAGAG +
Preference number: 6 (lower is better)
Translates to: IQNAANPRSDGD*RSSVQKRATQE
Trigger: CTCTTGAGTTGCACGTTTCTGCACCGAGGACCTCAAATCCCCGTCGCTCCTAGGATTTGCAGCGTTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000594723.1
ENST00000601104.1
CDS CAA 90 bp ACCACGATTCTGGGATCCCAGGCCTCTCCTAGGAATATAGGAAGCTaGGCCCCAGCCCCAATTGGAGGATCCAGAAACAACATCCCTAAC +
Preference number: 6 (lower is better)
Translates to: TTILGSQASPRNIGS*APAPIGGSRNNIPN
Trigger: GTTAGGGATGTTGTTTCTGGATCCTCCAATTGGGGCTGGGGCCAAGCTTCCTATATTCCTAGGAGAGGCCTGGGATCCCAGAATCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 72 bp CCAAAGGAAGTCCCACATCAGAGATCAAAGGCCTGCTaGGTAAGGAGAGACAGGCCACAGGCTGATATCCCA +
Preference number: 6 (lower is better)
Translates to: PKEVPHQRSKAC*VRRDRPQADIP
Trigger: TGGGATATCAGCCTGTGGCCTGTCTCTCCTTACTCAGCAGGCCTTTGATCTCTGATGTGGGACTTCCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CAA 90 bp AGACCTCCCCAGAGGATTATACCTAAAGTCCTCCCATCCTGGAAGTaGGTTCCTAAGGAAGACTCCTCCTTAGTAACCAAGGACCACGGG +
Preference number: 6 (lower is better)
Translates to: RPPQRIIPKVLPSWK*VPKEDSSLVTKDHG
Trigger: CCCGTGGTCCTTGGTTACTAAGGAGGAGTCTTCCTTAGGAACCAACTTCCAGGATGGGAGGACTTTAGGTATAATCCTCTGGGGAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 72 bp CCTTGGCAAACAAAAGTGAGGTCTAAGTGGTTTCAATaGCTGTGGCCAGCCTCTGACCTGCTGGCCTTGAAC +
Preference number: 6 (lower is better)
Translates to: PWQTKVRSKWFQ*LWPASDLLALN
Trigger: GTTCAAGGCCAGCAGGTCAGAGGCTGGCCACAGTCATTGAAACCACTTAGACCTCACTTTTGTTTGCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp CTCCAGTATTTCTCATCCTTCTGCTCCTCCGGCACCTaGATTTTTCTTGCCTTCTTCATGATTGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: LQYFSSFCSSGT*IFLAFFMIGWG
Trigger: GCCCCAGCCAATCATGAAGAAGGCAAGAAAAATCCAGGTGCCGGAGGAGCAGAAGGATGAGAAATACTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222122.10
ENST00000593500.1
ENST00000599385.5
CDS CCA 72 bp GAAGACTGTCCTTTGCAAGTGTGCCTGGTGGAGCTCTaGACCCAAGTAATAGGAGAAGCTCCAAGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: EDCPLQVCLVEL*TQVIGEAPSLY
Trigger: GTAGAGACTTGGAGCTTCTCCTATTACTTGGGTCCAGAGCTCCACCAGGCACACTTGCAAAGGACAGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CAA 90 bp CGTCCCTGGAGACCTCAATGTGCCCAAAGGGAAACATCTTTCCTCTaGCTCTTCCAGTCACTTAGTTCCACTCAACCTCCAAAGATTCCC +
Preference number: 6 (lower is better)
Translates to: RPWRPQCAQRETSFL*LFQSLSSTQPPKIP
Trigger: GGGAATCTTTGGAGGTTGAGTGGAACTAAGTGACTGGAAGAGCAAGAGGAAAGATGTTTCCCTTTGGGCACATTGAGGTCTCCAGGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS TCA 72 bp CTTCTTCATGATTGGCTGGGGCTTAAGTTCCTCTTCTaGGAAGCGATGTCTTCGAGGGTCAAAGGTCTCGTG +
Preference number: 6 (lower is better)
Translates to: LLHDWLGLKFLF*EAMSSRVKGLV
Trigger: CACGAGACCTTTGACCCTCGAAGACATCGCTTCTCAGAAGAGGAACTTAAGCCCCAGCCAATCATGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222122.10
ENST00000593500.1
ENST00000594723.1
ENST00000599385.5
ENST00000601104.1
CDS TCA 72 bp GCCAAGGCAACCTCATCCATCCTTGGCAAACAAAAGTaGGGTCTAAGTGGTTTCAATGACTGTGGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: AKATSSILGKQK*GLSGFNDCGQP
Trigger: AGGCTGGCCACAGTCATTGAAACCACTTAGACCTCACTTTTGTTTGCCAAGGATGGATGAGGTTGCCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS GCA 72 bp CCTAAAGGGGCTGGCACAGTCTTCATCCTAGCCAAATaGAATCACTCCAAAGGAAGTCCCACATCAGAGATC +
Preference number: 6 (lower is better)
Translates to: PKGAGTVFILAK*NHSKGSPTSEI
Trigger: GATCTCTGATGTGGGACTTCCTTTGGAGTGATTGCATTTGGCTAGGATGAAGACTGTGCCAGCCCCTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp CATTGCCTTTCCAGATCCTGGTTGCTAAGGAAAGCTTaGTGCCCTGGTGATGGGGTTTGGTGTCCCATAAAA +
Preference number: 6 (lower is better)
Translates to: HCLSRSWLLRKA*CPGDGVWCPIK
Trigger: TTTTATGGGACACCAAACCCCATCACCAGGGCACCAAGCTTTCCTTAGCAACCAGGATCTGGAAAGGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp CCAGTAAATAACTCTGGTGTTCCGGACTTCCAGTTCTaGCTTCACGAGTATCCACATCGTTTGTCCCCAAGT +
Preference number: 6 (lower is better)
Translates to: PVNNSGVPDFQF*LHEYPHRLSPS
Trigger: ACTTGGGGACAAACGATGTGGATACTCGTGAAGCCAGAACTGGAAGTCCGGAACACCAGAGTTATTTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp CCTCCCCAGAGGATTATACCTAAAGTCCTCCCATCCTaGAAGTTGGTTCCTAAGGAAGACTCCTCCTTAGTA +
Preference number: 6 (lower is better)
Translates to: PPQRIIPKVLPS*KLVPKEDSSLV
Trigger: TACTAAGGAGGAGTCTTCCTTAGGAACCAACTTCCAGGATGGGAGGACTTTAGGTATAATCCTCTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CCA 72 bp GGCACCTGGATTTTTCTTGCCTTCTTCATGATTGGCTaGGGCTTAAGTTCCTCTTCTGAGAAGCGATGTCTT +
Preference number: 6 (lower is better)
Translates to: GTWIFLAFFMIG*GLSSSSEKRCL
Trigger: AAGACATCGCTTCTCAGAAGAGGAACTTAAGCCCCAGCCAATCATGAAGAAGGCAAGAAAAATCCAGGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222122.10
ENST00000593500.1
ENST00000594723.1
ENST00000599385.5
ENST00000601104.1
CDS GCA 72 bp CTCCTTAGTAACCAAGGACCACGGGGCTCAGAAAGATaGTCTCTACTCCACTATTTAATTAAAGCCCAGTTC +
Preference number: 6 (lower is better)
Translates to: LLSNQGPRGSER*SLLHYLIKAQF
Trigger: GAACTGGGCTTTAATTAAATAGTGGAGTAGAGAGCATCTTTCTGAGCCCCGTGGTCCTTGGTTACTAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594723.1
CDS CAA 72 bp CAGAGGATTATACCTAAAGTCCTCCCATCCTGGAAGTaGGTTCCTAAGGAAGACTCCTCCTTAGTAACCAAG +
Preference number: 6 (lower is better)
Translates to: QRIIPKVLPSWK*VPKEDSSLVTK
Trigger: CTTGGTTACTAAGGAGGAGTCTTCCTTAGGAACCAACTTCCAGGATGGGAGGACTTTAGGTATAATCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594723.1