RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DBNDD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000003249

Ensembl transcript IDs: ENST00000002501.11, ENST00000304733.8, ENST00000392973.8, ENST00000568330.2, ENST00000568662.2, ENST00000568838.2, ENST00000623401.1

Found 671 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGAGCAGAGGGAGCAGGGCCTGTCAGCCTCCTCTGCTGCTCCTaGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: PRAEGAGPVSLLCCS*TETHGVPWAPNLPS
Trigger: GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCAGAGGAGGCTGACAGGCCCTGCTCCCTCTGCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 90 bp CAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTCCTGACTCGGGGCCCAGGAACGAGC +
Preference number: 1 (lower is better)
Translates to: QGRRGPLHSSARSWQ*LRDAVFLTRGPGTS
Trigger: GCTCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 90 bp GCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCA +
Preference number: 1 (lower is better)
Translates to: AAPGQRPTGSHGLQT*PASLRAVGRPCSRA
Trigger: TGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 90 bp CCAGGGTGTGTGTCAGGAGGTGACGGCTGGAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCAGCACTGCCCAGATCTGCCATCGTG +
Preference number: 1 (lower is better)
Translates to: PGCVSGGDGWSLVGG*SVSAGSALPRSAIV
Trigger: CACGATGGCAGATCTGGGCAGTGCTGACCCAGCAGACACACTTCACCCGCCCACGAGGCTCCAGCCGTCACCTCCTGACACACACCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 90 bp GCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTaGGGCAGGAACTGGGTTTGCCAGCAGTGCGGAGGGGCAGCGGGT +
Preference number: 1 (lower is better)
Translates to: AAGLCVTGNQGRRPG*GRNWVCQQCGGAAG
Trigger: ACCCGCTGCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCTCAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp CCGCCTCTGGCTTCTGAGCTTGGCAGCACAGGAAAACGCGGAGGTTaGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: PPLASELGSTGKRGG*STPRSSWSGCHRPG
Trigger: CCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp CTGAGGCAGGAACTGGGTTTGCCAGCAGTGCGGAGGGGCAGCGGGTaGCTCAGAAGTGGGAGCAGGTACACAGAAGGAGCTCAGGGCATG +
Preference number: 1 (lower is better)
Translates to: LRQELGLPAVRRGSG*LRSGSRYTEGAQGM
Trigger: CATGCCCTGAGCTCCTTCTGTGTACCTGCTCCCACTTCTGAGCCACCCGCTGCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 90 bp ATTCCTCAGCACGTTCCTGGCAGTGACTCCGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTG +
Preference number: 1 (lower is better)
Translates to: IPQHVPGSDSVTLSS*LGAQERAGRKATGL
Trigger: CAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGCTGAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp GAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTaGCTGAGGCAGGAACTGGGTTTGCCAGCAGTGCGGAGGGGCAGC +
Preference number: 1 (lower is better)
Translates to: ESCWALCDWKPGKET*LRQELGLPAVRRGS
Trigger: GCTGCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCTCAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp TGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: WSDMSVSSVRSRRSK*TSREETLLRGCLLS
Trigger: GGAGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR GCA 90 bp GGTGGCTCAGAAGTGGGAGCAGGTACACAGAAGGAGCTCAGGGCATaGCTGGGGCATCTCCAAAGCTCTGCTGAGAGTGAAGGCCAGGAG +
Preference number: 1 (lower is better)
Translates to: GGSEVGAGTQKELRA*LGHLQSSAESEGQE
Trigger: CTCCTGGCCTTCACTCTCAGCAGAGCTTTGGAGATGCCCCAGGCATGCCCTGAGCTCCTTCTGTGTACCTGCTCCCACTTCTGAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp GCTCAGAAGTGGGAGCAGGTACACAGAAGGAGCTCAGGGCATGCCTaGGGCATCTCCAAAGCTCTGCTGAGAGTGAAGGCCAGGAGCCTG +
Preference number: 1 (lower is better)
Translates to: AQKWEQVHRRSSGHA*GISKALLRVKARSL
Trigger: CAGGCTCCTGGCCTTCACTCTCAGCAGAGCTTTGGAGATGCCCCAGGCATGCCCTGAGCTCCTTCTGTGTACCTGCTCCCACTTCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp TTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAG +
Preference number: 1 (lower is better)
Translates to: LRFSSSESAKTSASS*SDMSVSSVRSRRSK
Trigger: CTTCGACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR TCA 90 bp CAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCTaGGCTTGGCAGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAG +
Preference number: 1 (lower is better)
Translates to: QHIVPLATTKPASGF*AWQHRKTRRLEHPQ
Trigger: CTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 90 bp TGGCCAGGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTaGTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTG +
Preference number: 1 (lower is better)
Translates to: WPGTQGCPYGTERES*WALCDWKPGKETWL
Trigger: CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp CCAGGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTaGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: PGTQGCPYGTERESC*ALCDWKPGKETWLR
Trigger: CCTCAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp TGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTaGAAACCAGGGAAGGAGACCTGGCTGAGGCAGGAACTGGGTTTG +
Preference number: 1 (lower is better)
Translates to: CPYGTERESCWALCD*KPGKETWLRQELGL
Trigger: CAAACCCAGTTCCTGCCTCAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTC +
Preference number: 1 (lower is better)
Translates to: GNQGGNFGAASPCVL*WTAHCPISHYQTRL
Trigger: GAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp AATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTaGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: NQGGNFGAASPCVLC*TAHCPISHYQTRLW
Trigger: CCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp CGTGGAGTAGAAGAAGGGGCAGGATGGAAATCAAGGTGGGAATTTTaGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCC +
Preference number: 1 (lower is better)
Translates to: RGVEEGAGWKSRWEF*GRFSMCALLDSTLS
Trigger: GGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCCTGCCCCTTCTTCTACTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 90 bp AGGATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTaGTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCC +
Preference number: 1 (lower is better)
Translates to: RMEIKVGILGPLLHV*FAGQHIVPLATTKP
Trigger: GGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 90 bp ATTCCGGGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGGGAATGGACTTGTCTGTCACGCAGG +
Preference number: 1 (lower is better)
Translates to: IPGGVIKSLRQSGDI*CSELRREWTCLSRR
Trigger: CCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCCCGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 90 bp TTAAACTCATTCTTTGACTTGCTGTCAGGCAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCATTGGGAGGGTGTGAGCTGGGGCTCC +
Preference number: 1 (lower is better)
Translates to: LNSFFDLLSGKKPIL*ASAYKHWEGVSWGS
Trigger: GGAGCCCCAGCTCACACCCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCAAGTCAAAGAATGAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp TCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCTCCGTGCCCTGTCCCCTGGGCTaGGACGCCCAGCGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SKWTSREETLLRGCLLSVPCPLG*DAQRSL
Trigger: CAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGG...CACGGAGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR GCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: SGPRNELDVRPLGCACAGGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 2 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GCTGGGGACTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCTTGTCCCCTGTCCCCTaGGCTGGGACGCCCAGCGCA +
Preference number: 2 (lower is better)
Translates to: AGDSVLRFSSSESAKTSALSPVP*AGTPSA
Trigger: TGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAA...GGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR TCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTACTGGGCTGTGCTTGTaGTGGGGCTCCCAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPTGLCL*WGSQRH
Trigger: ATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGT...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp CTGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGACCTCCTGCAGGAGCCCCGGTaGTGGTACTGGGATGCCCCC +
Preference number: 2 (lower is better)
Translates to: LVRHVGELSEVQEVEVDLLQEPR*WYWDAP
Trigger: GGGGGCATCCCAGTACCAGCACCGGGGCTCCTGCAG...GAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGGCCGGTCTCGGGGCTaGCAGAGAGCTGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGGRSRG*QRAAPR
Trigger: CCTGGGGGCAGCTCTCTGCCAGCCCCGAGACCGGCC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCCCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 2 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 2 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp CTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTGCCCCGGTGCTGGTACTaGGATGCCCCCGACCTCCTC +
Preference number: 2 (lower is better)
Translates to: LGVEVLVVRVSKDLGQLLPRCWY*DAPDLL
Trigger: GAGGAGGTCGGGGGCATCCCAGTACCAGCACCGGGG...CAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR CCA 90 bp GTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGACCTCCAGAGAGGAGACCAGGAGCCCCGGTGCTaGTACTGGGATGCCCCCGAC +
Preference number: 2 (lower is better)
Translates to: VGELSEVQEVEVDLQRGDQEPRC*YWDAPD
Trigger: GTCGGGGGCATCCCAGTACCAGCACCGGGGCTCCTG...GTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR TCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: APGQRPTGSHGLQTCPASARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTCGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: APGQRPTGSHGLQTCPASRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCCGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp TCCAGGAGGTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCGTGCTGGTACTGGGATaGCCCCGACCTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SRRSKWTSREETLLRGCLVLVLG*PRPPPP
Trigger: TGGAGGAGGAGGTCGGGGGCATCCCAGTACCAGCAC...GAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR CCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: APGQRPTGSHGLQTCPASTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCCTTAGAGCTGAGCCTTaGGGAGGGGACCCTAGTGAG +
Preference number: 2 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSLRAEP*GGDPSE
Trigger: CTCACTAGGGTCCCCTCCCCAAGGCTCAGCTCTAAG...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCA +
Preference number: 2 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGSTAQI*HRVRTP
Trigger: TGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCT...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp ACCTGCTGGGGACTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: TCWGLGVEVLVVRVSKDLTPSAA*GTSASL
Trigger: TAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGT...GAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR GCA 90 bp TGGGGACTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGACGCTGCTCAGAGGCTaGCTCCTCTCCGTGACCTGC +
Preference number: 2 (lower is better)
Translates to: WGLGVEVLVVRVSKDLGQTLLRG*LLSVTC
Trigger: GCAGGTCACGGAGAGGAGGCAGCCTCTGAGCAGCGT...CTGGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAGGCCGGTCTCGGGGCTaGCAGAGAGCTGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGGRSRG*QRAAPR
Trigger: CCTGGGGGCAGCTCTCTGCCAGCCCCGAGACCGGCC...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTCTTAGAGCTGAGCCTTaGGGAGGGGACCCTAGTGAG +
Preference number: 2 (lower is better)
Translates to: APGQRPTGSHGLQTCPASLRAEP*GGDPSE
Trigger: CTCACTAGGGTCCCCTCCCCAAGGCTCAGCTCTAAG...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGCTCCTGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGTCCTCCACAGGCGTGTaGCCATTGTCCCCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: SSWSDMSVSSVRSRRSKWSSTGV*PLSPVP
Trigger: GGGGACAGGGGACAATGGCCACACGCCTGTGGAGGA...CCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR TCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 2 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 2 (lower is better)
Translates to: RESCWALCDWKPGKETWLGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: RESCWALCDWKPGKETWLSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCA +
Preference number: 2 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCSTAQI*HRVRTP
Trigger: TGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCT...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTTGGGAGGGTGTGAGCTaGGGCTCCCAGACACCCCCA +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCWEGVS*GSQTPP
Trigger: TGGGGGTGTCTGGGAGCCCCAGCTCACACCCTCCCA...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp CTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTGTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACG +
Preference number: 2 (lower is better)
Translates to: LGVEVLVVRVSKDLGQLLSRRSK*TSREET
Trigger: CGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA...CAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR-3UTR TCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: HVCFAGQHIVPLATTKPAVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 2 (lower is better)
Translates to: TQGCPYGTERESCWALCDRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGACGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCCGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 2 (lower is better)
Translates to: HVCFAGQHIVPLATTKPARLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAACGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: TQGCPYGTERESCWALCDGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 2 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CAA 90 bp CATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCTGAGCTaGGCAGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: HCPISHYQTRLWLLS*AAQENAEVGAPPGV
Trigger: AACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCTGCTGGGTCAGCACTaGCCAGATCTGCCATCGTGT +
Preference number: 2 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLLLGQH*PDLPSC
Trigger: ACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTACTGGGCTGTGCTTGTaGTGGGGCTCCCAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCTGLCL*WGSQRH
Trigger: ATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGT...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGAAGGAGCTCAGGGCATaGCTGGGGCATCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: RESCWALCDWKPGKETWLKELRA*LGHLQS
Trigger: GCTTTGGAGATGCCCCAGGCATGCCCTGAGCTCCTT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAGGCAGGAACTGGGTTTaGCAGCAGTGCGGAGGGGCA +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRGRNWV*QQCGGA
Trigger: TGCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCC...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGTGGGAGGGTGTGAGCTaGGGCTCCCAGACACCCCCA +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRWEGVS*GSQTPP
Trigger: TGGGGGTGTCTGGGAGCCCCAGCTCACACCCTCCCA...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: CCQARSPFCELQHISIGRVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 2 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: HVCFAGQHIVPLATTKPAARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCCGCCTCTGGCTTCTaGGCTTGGCAGCACAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRPASGF*AWQHRK
Trigger: TTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGG...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCCCGCCTCTGGCTTCTaGGCTTGGCAGCACAGGAAA +
Preference number: 2 (lower is better)
Translates to: TQGCPYGTERESCWALCDPASGF*AWQHRK
Trigger: TTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAACTGGGCTGTGCTTGTaGTGGGGCTCCCAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRTGLCL*WGSQRH
Trigger: ATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGT...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTGTGAAGTGTGTCTGCTaGGTCAGCACTGCCCAGATC +
Preference number: 2 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLVKCVC*VSTAQI
Trigger: GATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 2 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAGGAAAACGCGGAGGTTaGAGCACCCCCAGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGGKRGG*STPRSS
Trigger: GGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCC...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAATACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAGAGACAGCGCCTCCGTaGAGTAGAAGAAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGETAPP*SRRRGR
Trigger: CCTGCCCCTTCTTCTACTCCACGGAGGCGCTGTCTC...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 2 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCA +
Preference number: 2 (lower is better)
Translates to: HVCFAGQHIVPLATTKPASTAQI*HRVRTP
Trigger: TGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCT...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCCTGCTGGGTCAGCACTaGCCAGATCTGCCATCGTGT +
Preference number: 2 (lower is better)
Translates to: HVCFAGQHIVPLATTKPALLGQH*PDLPSC
Trigger: ACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAG...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAACTGGGCTGTGCTTGTaGTGGGGCTCCCAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTTGLCL*WGSQRH
Trigger: ATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGT...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: CCQARSPFCELQHISIGRKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGCCTGTCAGCCTCCTCTaGTGCTCCTGGACAGAGACC +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRPVSLL*CSWTET
Trigger: GGTCTCTGTCCAGGAGCAGCAGAGGAGGCTGACAGG...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGGAGACAGCGCCTCCGTaGAGTAGAAGAAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRETAPP*SRRRGR
Trigger: CCTGCCCCTTCTTCTACTCCACGGAGGCGCTGTCTC...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAGAGCTAAGGAGGGAATaGACTTGTCTGTCACGCAGG +
Preference number: 2 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKELRRE*TCLSRR
Trigger: CCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTC...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGGAGCTAAGGAGGGAATaGACTTGTCTGTCACGCAGG +
Preference number: 2 (lower is better)
Translates to: RESCWALCDWKPGKETWLELRRE*TCLSRR
Trigger: CCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTC...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGAGCTAAGGAGGGAATaGACTTGTCTGTCACGCAGG +
Preference number: 2 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGELRRE*TCLSRR
Trigger: CCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGTCAGCATATAAGCATTaGGAGGGTGTGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: RESCWALCDWKPGKETWLSAYKH*EGVSWG
Trigger: GCCCCAGCTCACACCCTCCCAATGCTTATATGCTGA...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACGGGTGGCTCAGAAGTaGGAGCAGGTACACAGAAGG +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRRVAQK*EQVHRR
Trigger: CCTTCTGTGTACCTGCTCCCACTTCTGAGCCACCCG...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCGGGCAATGGGATGTaGGCAGAAACGAGAATGTGG +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRPGNGM*AETRMW
Trigger: CCACATTCTCGTTTCTGCTCACATCCCATTGCCCGG...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGATGGCCTAGCAGTGGGTaGAGGACAAGGAGAGGTGAA +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRWPSSG*RTRRGE
Trigger: TTCACCTCTCCTTGTCCTGCACCCACTGCTAGGCCA...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCC +
Preference number: 2 (lower is better)
Translates to: TQGCPYGTERESCWALCDHGLQT*PASLRA
Trigger: GGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 2 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 2 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGATACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGATACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTTCAAGGTGGGAATTTTaGGGCCGCTTCTCCATGTGT +
Preference number: 2 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLSRWEF*GRFSMC
Trigger: ACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGA...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGCCAGAAGTGTGCTCATaGGAAATGGGGCAGGGGGCA +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRPEVCS*EMGQGA
Trigger: TGCCCCCTGCCCCATTTCCCATGAGCACACTTCTGG...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGCGGGTGGCTCAGAAGTaGGAGCAGGTACACAGAAGG +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRRVAQK*EQVHRR
Trigger: CCTTCTGTGTACCTGCTCCCACTTCTGAGCCACCCG...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CAA 90 bp CCGTGGAGTAGAAGAAGGGGCAGGATGGAAATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTC +
Preference number: 2 (lower is better)
Translates to: PWSRRRGRMEIKVGI*GPLLHVCFAGQHIV
Trigger: GACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCCTGCCCCTTCTTCTACTCCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 2 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTTCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCC +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCSPCVL*WTAHCP
Trigger: GGGACAATGTGCTGTCCAGCAAAGCACACATGGAGA...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGTGGCCTAGCAGTGGGTaGAGGACAAGGAGAGGTGAA +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRWPSSG*RTRRGE
Trigger: TTCACCTCTCCTTGTCCTGCACCCACTGCTAGGCCA...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGTACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCCATGTGTGCTTTGCTaGACAGCACATTGTCCCATT +
Preference number: 2 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLPCVLC*TAHCPI
Trigger: AATGGGACAATGTGCTGTCCAGCAAAGCACACATGG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGCTTAGAGCTGAGCCTTaGGGAGGGGACCCTAGTGAG +
Preference number: 2 (lower is better)
Translates to: CCQARSPFCELQHISIGRLRAEP*GGDPSE
Trigger: CTCACTAGGGTCCCCTCCCCAAGGCTCAGCTCTAAG...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGATCAGCATATAAGCATTaGGAGGGTGTGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRSAYKH*EGVSWG
Trigger: GCCCCAGCTCACACCCTCCCAATGCTTATATGCTGA...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR GCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGATCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCC +
Preference number: 2 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGSPCVL*WTAHCP
Trigger: GGGACAATGTGCTGTCCAGCAAAGCACACATGGAGA...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAGTGAAGTGTGTCTGCTaGGTCAGCACTGCCCAGATC +
Preference number: 2 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGVKCVC*VSTAQI
Trigger: GATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGTGAAGTGTGTCTGCTaGGTCAGCACTGCCCAGATC +
Preference number: 2 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLVKCVC*VSTAQI
Trigger: GATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAGGATGGAAATCAAGGTaGGAATTTTGGGGCCGCTTC +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRGWKSR*EFWGRF
Trigger: GAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCC...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGAGACAGCGCCTCCGTaGAGTAGAAGAAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELETAPP*SRRRGR
Trigger: CCTGCCCCTTCTTCTACTCCACGGAGGCGCTGTCTC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAACAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKQSGDI*CSELRR
Trigger: CCTCCTTAGCTCAGAACACCAAATATCACCAGACTG...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGCTTGTAGCCGGGCAATaGGATGTGAGCAGAAACGAG +
Preference number: 2 (lower is better)
Translates to: DALIPLFANELCGSSAGRLVAGQ*DVSRNE
Trigger: CTCGTTTCTGCTCACATCCCATTGCCCGGCTACAAG...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGCTTGTAGCCGGGCAATaGGATGTGAGCAGAAACGAG +
Preference number: 2 (lower is better)
Translates to: CCQARSPFCELQHISIGRLVAGQ*DVSRNE
Trigger: CTCGTTTCTGCTCACATCCCATTGCCCGGCTACAAG...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTAGGCTGGCTTGGGGATaGAAAGTAAGCTTACACTTT +
Preference number: 2 (lower is better)
Translates to: GTQGCPYGTERESCWALCRLAWG*KVSLHF
Trigger: AAAGTGTAAGCTTACTTTCCATCCCCAAGCCAGCCT...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCAT +
Preference number: 2 (lower is better)
Translates to: TQGCPYGTERESCWALCDKKPIL*ASAYKH
Trigger: ATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTT...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACATTAAACTCATTCTTTaGCTTGCTGTCAGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: TQGCPYGTERESCWALCDIKLIL*LAVRQE
Trigger: TTCTTGCCTGACAGCAAGTCAAAGAATGAGTTTAAT...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR TCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAATTAAACTCATTCTTTaGCTTGCTGTCAGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRIKLIL*LAVRQE
Trigger: TTCTTGCCTGACAGCAAGTCAAAGAATGAGTTTAAT...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 72 bp AGGCTGCCTCCTCTCCGTGACCTGCAGGAGCCCCGGTaGTGGTACTGGGATGCCCCCGACCTCCTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: RLPPLRDLQEPR*WYWDAPDLLLH
Trigger: GTGGAGGAGGAGGTCGGGGGCATCCCAGTACCAGCACCGGGGCTCCTGCAGGTCACGGAGAGGAGGCAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR CCA 72 bp CGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCGGGGGCCCCGTGTGTC +
Preference number: 3 (lower is better)
Translates to: RAGRKATGLCLC*GSQRHPGAPCV
Trigger: GACACACGGGGCCCCCGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 72 bp TCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: SPVPWAGTPSAA*GTSASLTISPV
Trigger: GACAGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR TCA 72 bp GTGTCAGGAGGTGACGGCTGGAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCAGCACTGCCCAGATCT +
Preference number: 3 (lower is better)
Translates to: VSGGDGWSLVGG*SVSAGSALPRS
Trigger: AGATCTGGGCAGTGCTGACCCAGCAGACACACTTCACCCGCCCACGAGGCTCCAGCCGTCACCTCCTGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 72 bp CACGTTCCTGGCAGTGACTCCGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGAGCTGGACGTAAGGCC +
Preference number: 3 (lower is better)
Translates to: HVPGSDSVTLSS*LGAQERAGRKA
Trigger: GGCCTTACGTCCAGCTCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCACGGAGTCACTGCCAGGAACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 72 bp CGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTCCTGACTCGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: RGPLHSSARSWQ*LRDAVFLTRGP
Trigger: TGGGCCCCGAGTCAGGAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 72 bp GGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCCGTGGGCAGGCCTTGT +
Preference number: 3 (lower is better)
Translates to: GQRPTGSHGLQT*PASLRAVGRPC
Trigger: ACAAGGCCTGCCCACGGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp GTGCAGACCTGCTGGGGACTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAACAGGCGTGTGGCCATaGTCCCCTGTCCCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: VQTCWGLGVEVLVVRVSKTGVWP*SPVPWA
Trigger: AGCCCAGGGGACAGGGGACAATGGCCACACGCCTGT...TTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCAGCAGGTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR CCA 72 bp TCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: SSSESAKTSASS*SDMSVSSVRSR
Trigger: CCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
3UTR TCA 72 bp CTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTaGGGCAGGAACTGGGTTTGCCAGCAGTGCGGAGGG +
Preference number: 3 (lower is better)
Translates to: LCVTGNQGRRPG*GRNWVCQQCGG
Trigger: CCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCTCAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 72 bp GTGAAGTGTGTCTGCTGGGTCAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCATCCCTGCAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VKCVCWVSTAQI*HRVRTPSLQEL
Trigger: CAGCTCCTGCAGGGATGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 72 bp GCTTCTGAGCTTGGCAGCACAGGAAAACGCGGAGGTTaGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: ASELGSTGKRGG*STPRSSWSGCH
Trigger: GTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCTGCCAAGCTCAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 72 bp GAAAGATGGGGAGGAAGACCCTGGCGGGTGGAAGTGTaGCCAGGGACACAAGGCTGCCCTTATGGGACTGAA +
Preference number: 3 (lower is better)
Translates to: ERWGGRPWRVEV*PGTQGCPYGTE
Trigger: TTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGGCCACACTTCCACCCGCCAGGGTCTTCCTCCCCATCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACTCTGGCTTCTGAGCTaGGCAGCACAGGAAAACGCG +
Preference number: 3 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGLWLLS*AAQENA
Trigger: CGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAG...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: RESCWALCDWKPGKETWLKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGAGGCAGGAACTGGGTTaGCCAGCAGTGCGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: DALIPLFANELCGSSAGRRQELG*PAVRRG
Trigger: GCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCT...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAAGGAAAACGCGGAGGTaGGAGCACCCCCAGGAGTTC +
Preference number: 3 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGRKTRR*EHPQEF
Trigger: GAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: TQGCPYGTERESCWALCDKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 72 bp CAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTaGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACC +
Preference number: 3 (lower is better)
Translates to: QGCPYGTERESC*ALCDWKPGKET
Trigger: GGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAAGGAAAACGCGGAGGTaGGAGCACCCCCAGGAGTTC +
Preference number: 3 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGRKTRR*EHPQEF
Trigger: GAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCT...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGCTCTGGCTTCTGAGCTaGGCAGCACAGGAAAACGCG +
Preference number: 3 (lower is better)
Translates to: DALIPLFANELCGSSAGRLWLLS*AAQENA
Trigger: CGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAG...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 72 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTaGTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: TQGCPYGTERES*WALCDWKPGKE
Trigger: CTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 72 bp GAAGAAGGGGCAGGATGGAAATCAAGGTGGGAATTTTaGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGC +
Preference number: 3 (lower is better)
Translates to: EEGAGWKSRWEF*GRFSMCALLDS
Trigger: GCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCCTGCCCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTG +
Preference number: 3 (lower is better)
Translates to: TQGCPYGTERESCWALCDIKVGI*GPLLHV
Trigger: CACATGGAGAAGCGGCCCCAAAATTCCCACCTTGAT...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: CCQARSPFCELQHISIGRKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR GCA 72 bp GGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCCATTAGCCACTACCAA +
Preference number: 3 (lower is better)
Translates to: GGNFGAASPCVL*WTAHCPISHYQ
Trigger: TTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 72 bp TCTGGTGATATTTGGTGTTCTGAGCTAAGGAGGGAATaGACTTGTCTGTCACGCAGGGGCCAAGAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: SGDIWCSELRRE*TCLSRRGQEKQ
Trigger: CTGCTTCTCTTGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTCAGAACACCAAATATCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR-3UTR CAA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGTTCTCCATGTGTGCTTaGCTGGACAGCACATTGTCC +
Preference number: 3 (lower is better)
Translates to: CCQARSPFCELQHISIGRFSMCA*LDSTLS
Trigger: GGACAATGTGCTGTCCAGCAAAGCACACATGGAGAA...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR TCA 72 bp TTCTTTGACTTGCTGTCAGGCAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCATTGGGAGGGTGTGAGC +
Preference number: 3 (lower is better)
Translates to: FFDLLSGKKPIL*ASAYKHWEGVS
Trigger: GCTCACACCCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCAAGTCAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
3UTR CCA 72 bp GGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGGGAATGGACTTGTCTG +
Preference number: 3 (lower is better)
Translates to: GVIKSLRQSGDI*CSELRREWTCL
Trigger: CAGACAAGTCCATTCCCTCCTTAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCCTCCGGGGGCTCCATaGGGCCGGTGCGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPPPGAP*GRCGLG
Trigger: TCCCAGACCGCACCGGCCGCATGGAGCCCCCGGAGG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002501.11
CDS-3UTR GCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGCCCGGGGCAGCGGGTaGAGACCTGCTGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPARGSG*RPAGDS
Trigger: CGAGTCCCCAGCAGGTCTGCACCCGCTGCCCCGGGC...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGCCCTGTCCCCTGGGCTaGGACGCCCAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGPCPLG*DAQRSL
Trigger: CAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGG...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp CAGGCGTGTGGCCATTGTCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTACGCTGCTCAGAGGCTaGCTCCTCTCCGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: QACGHCPLSPGLGRPAQPTLLRG*LLSVTC
Trigger: GCAGGTCACGGAGAGGAGGCAGCCTCTGAGCAGCGT...AGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAATGGCCACACGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR GCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCGCCCGGGGCAGCGGGTaGAGACCTGCTGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGARGSG*RPAGDS
Trigger: CGAGTCCCCAGCAGGTCTGCACCCGCTGCCCCGGGC...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGGGCCGGTCTCGGGGCTaGCAGAGAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVGRSRG*QRAAPR
Trigger: CCTGGGGGCAGCTCTCTGCCAGCCCCGAGACCGGCC...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACTGGGAGGGTGTGAGCTaGGGCTCCCAGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHWEGVS*GSQTPP
Trigger: TGGGGGTGTCTGGGAGCCCCAGCTCACACCCTCCCA...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACACGCTGCTCAGAGGCTaGCTCCTCTCCGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHTLLRG*LLSVTC
Trigger: GCAGGTCACGGAGAGGAGGCAGCCTCTGAGCAGCGT...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTTGGGTTTGCCAGCAGTaGGGAGGGGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPWVCQQ*GGAAGG
Trigger: GCCACCCGCTGCCCCTCCGCACTGCTGGCAAACCCA...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCTTGTCCCCTGTCCCCTaGGCTGGGACGCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVLSPVP*AGTPSA
Trigger: TGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAA...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCCCCGGTGCTGGTACTaGGATGCCCCCGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPPRCWY*DAPDLL
Trigger: GAGGAGGTCGGGGGCATCCCAGTACCAGCACCGGGG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGACGTGTCCAGGACTGTaGCCTGCCGCTCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGTCPGL*PAARGR
Trigger: GCGACCCCGAGCGGCAGGCCACAGTCCTGGACACGT...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCACGTGTCCAGGACTGTaGCCTGCCGCTCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVTCPGL*PAARGR
Trigger: GCGACCCCGAGCGGCAGGCCACAGTCCTGGACACGT...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACTGGCGGGTGGAAGTGTaGCCAGGGACACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHWRVEV*PGTQGC
Trigger: GCAGCCTTGTGTCCCTGGCCACACTTCCACCCGCCA...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCCACCAGGGCCCGCGTaGCTGCATTCCAGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPPPGPA*LHSSAV
Trigger: GACGGCACTGGAATGCAGCCACGCGGGCCCTGGTGG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCGGCGGCCGCGCCCGCTaGCGTCCTCTTGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVGGRAR*RPLVLF
Trigger: GAAGAGAACAAGAGGACGCCAGCGGGCGCGGCCGCC...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS-3UTR CCA 90 bp TGGGACGCCCAGCGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTCCTGTTTCAGGCCTGGGGGTTaGGCGGGCTGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: WDAQRSLRHLSLLNDLSCFRPGG*AGWTGL
Trigger: GAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGAA...ACAGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR TCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGCGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGGAAGGAGACCTGGCTaGGGCAGGAACTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHGRRPG*GRNWVC
Trigger: GCAAACCCAGTTCCTGCCTCAGCCAGGTCTCCTTCC...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGGCACAGGAGGGGCCTaGCTCGCGCTGGGTAATGAC +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPGTGGA*LALGND
Trigger: GTCATTACCCAGCGCGAGTCAGGCCCCTCCTGTGCC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVTPSAA*GTSASL
Trigger: TAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGT...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTCTGCAGGAGCCCCGGTaGTGGTACTGGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASLQEPR*WYWDAP
Trigger: GGGGGCATCCCAGTACCAGCACCGGGGCTCCTGCAG...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCTGCAGGAGCCCCGGTaGTGGTACTGGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVLQEPR*WYWDAP
Trigger: GGGGGCATCCCAGTACCAGCACCGGGGCTCCTGCAG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCTCCAGGACTGTGGCCTaGCGCTCGGGGTCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGSRTVA*RSGSPR
Trigger: CCTAGGCGACCCCGAGCGGCAGGCCACAGTCCTGGA...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGTCCAGGACTGTGGCCTaGCGCTCGGGGTCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVSRTVA*RSGSPR
Trigger: CCTAGGCGACCCCGAGCGGCAGGCCACAGTCCTGGA...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACACTGGGCTGTGCTTGTaGTGGGGCTCCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHTGLCL*WGSQRH
Trigger: ATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGT...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTCAGGGCCCGCGTGGCTaGATTCCAGTGCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASQGPRG*IPVPSW
Trigger: CCAGGACGGCACTGGAATGCAGCCACGCGGGCCCTG...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCTTGTCCCCTGTCCCCTaGGCTGGGACGCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGLSPVP*AGTPSA
Trigger: TGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAA...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCCCCCGGTGCTGGTACTaGGATGCCCCCGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGPRCWY*DAPDLL
Trigger: GAGGAGGTCGGGGGCATCCCAGTACCAGCACCGGGG...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp TGGGACGCCCAGCGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTCCTGTCAGGAGCCCCGGTGCTaGTACTGGGATGCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: WDAQRSLRHLSLLNDLSCQEPRC*YWDAPD
Trigger: GTCGGGGGCATCCCAGTACCAGCACCGGGGCTCCTG...ACAGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGTGGGAGGGTGTGAGCTaGGGCTCCCAGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGWEGVS*GSQTPP
Trigger: TGGGGGTGTCTGGGAGCCCCAGCTCACACCCTCCCA...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTGGTCCGACATGTCGGTGGGCCCGTTTCAGGCCTaGGGGTTGGGCGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSSESAKTSASSWSDMSVGPFQA*GLGGLD
Trigger: GTCCAGCCCGCCCAACCCCCAGGCCTGAAACGGGCC...CACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR TCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCACGCGGGGCTGGGTGTaGGGACTTGGCACATCCAGT +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSTRGWV*GLGTSS
Trigger: ACTGGATGTGCCAAGTCCTCACACCCAGCCCCGCGT...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR GCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCGTGCTGGTACTGGGATaGCCCCGACCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSVLVLG*PRPPPP
Trigger: TGGAGGAGGAGGTCGGGGGCATCCCAGTACCAGCAC...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GCTGGGGACTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCCTGCAGGAGCCCCGGTaGTGGTACTGGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGDSVLRFSSSESAKTSALQEPR*WYWDAP
Trigger: GGGGGCATCCCAGTACCAGCACCGGGGCTCCTGCAG...GGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR GCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCCTCCTCTCCGTGACCTaGAGGAGCCCCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGLLSVT*RSPGAG
Trigger: ACCAGCACCGGGGCTCCTGCAGGTCACGGAGAGGAG...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGGGTCGCCTAGGGGCTaGTTCTCGTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPGSPRG*FSWLCS
Trigger: TGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGGGCAGGAACTGGGTTTaGCAGCAGTGCGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGGRNWV*QQCGGA
Trigger: TGCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCC...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGGGCTTGTGGCCTCATaGCTGGACCCAGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPGLVAS*LDPDKG
Trigger: CCCCTTGTCTGGGTCCAGGCATGAGGCCACAAGCCC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp ATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGACCTCCAGAGAGGAGCCCTGTCCCCTGGGCTaGGACGCCCAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MSVSSVRSRRSKWTSREEPCPLG*DAQRSL
Trigger: CAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGG...CTCCTCTCTGGAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp TCCAGGAGGTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCTTGTCCCCTGTCCCCTaGGCTGGGACGCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SRRSKWTSREETLLRGCLLSPVP*AGTPSA
Trigger: TGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAA...GAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGTCCTCCACAGGCGTGTaGCCATTGTCCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGSSTGV*PLSPVP
Trigger: GGGGACAGGGGACAATGGCCACACGCCTGTGGAGGA...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCTCCTCCACAGGCGTGTaGCCATTGTCCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSSSTGV*PLSPVP
Trigger: GGGGACAGGGGACAATGGCCACACGCCTGTGGAGGA...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGGTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCCCCCGGTGCTGGTACTaGGATGCCCCCGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RRSKWTSREETLLRGCLLPRCWY*DAPDLL
Trigger: GAGGAGGTCGGGGGCATCCCAGTACCAGCACCGGGG...GAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACCTTAGAGCTGAGCCTTaGGGAGGGGACCCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHLRAEP*GGDPSE
Trigger: CTCACTAGGGTCCCCTCCCCAAGGCTCAGCTCTAAG...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGTGGGAGGGTGTGAGCTaGGGCTCCCAGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVWEGVS*GSQTPP
Trigger: TGGGGGTGTCTGGGAGCCCCAGCTCACACCCTCCCA...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCTGGGAGGGTGTGAGCTaGGGCTCCCAGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGWEGVS*GSQTPP
Trigger: TGGGGGTGTCTGGGAGCCCCAGCTCACACCCTCCCA...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCTGGCGGGTGGAAGTGTaGCCAGGGACACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVWRVEV*PGTQGC
Trigger: GCAGCCTTGTGTCCCTGGCCACACTTCCACCCGCCA...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCGGGGCCTCTCCACAGTaGGAAACGTGTCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVGASPQ*ETCPGL
Trigger: CAGTCCTGGACACGTTTCTCACTGTGGAGAGGCCCC...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCGGGGCCTCTCCACAGTaGGAAACGTGTCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSGASPQ*ETCPGL
Trigger: CAGTCCTGGACACGTTTCTCACTGTGGAGAGGCCCC...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCTCCGTGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: SKWTSREETLLRGCLLSVTPSAA*GTSASL
Trigger: TAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGT...CACGGAGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR GCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCTGCAGGAGCCCCGGTaGTGGTACTGGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCLQEPR*WYWDAP
Trigger: GGGGGCATCCCAGTACCAGCACCGGGGCTCCTGCAG...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp AAGACCTCGGCCAGCTCCTGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGCTCCTCTCCGTGACCTaGAGGAGCCCCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTSASSWSDMSVSSVRSRLLSVT*RSPGAG
Trigger: ACCAGCACCGGGGCTCCTGCAGGTCACGGAGAGGAG...CCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR GCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCCCAGAGAGGAGACGCTaGTCAGAGGCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPPERRR*SEAASS
Trigger: AGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGG...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCAGCGGGTGCAGACCTaGTGGGGACTCGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVQRVQT*WGLGVE
Trigger: CTCAACACCGAGTCCCCAGCAGGTCTGCACCCGCTG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCACTGGGCTGTGCTTGTaGTGGGGCTCCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPTGLCL*WGSQRH
Trigger: ATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGT...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGCCTGTCAGCCTCCTCTaGTGCTCCTGGACAGAGACC +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGPVSLL*CSWTET
Trigger: GGTCTCTGTCCAGGAGCAGCAGAGGAGGCTGACAGG...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGCCCTGTCCCCTGGGCTaGGACGCCCAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLPCPLG*DAQRSL
Trigger: CAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGG...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCCCTGTCCCCTGGGCTaGGACGCCCAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLPCPLG*DAQRSL
Trigger: CAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCAGGAGCCCCGGTGCTaGTACTGGGATGCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCQEPRC*YWDAPD
Trigger: GTCGGGGGCATCCCAGTACCAGCACCGGGGCTCCTG...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCGGGTGCAGACCTGCTaGGGACTCGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVRVQTC*GLGVEV
Trigger: AACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCG...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTAGGGGCTGCTTCTCGTaGCTCTGCTCAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPRGCFS*LCSALV
Trigger: GACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCT...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGCCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGGAAAACGCGGAGGTTaGAGCACCCCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPGKRGG*STPRSS
Trigger: GGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCGAGACAGCGCCTCCGTaGAGTAGAAGAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVETAPP*SRRRGR
Trigger: CCTGCCCCTTCTTCTACTCCACGGAGGCGCTGTCTC...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTGGTCCGACATGTCGGTCCAGGTACTTGCGTGTaGGGCGCCGACTGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LVVRVSKDLGQLLVRHVGPGTCV*GADCVR
Trigger: CCGCACACAGTCGGCGCCCCACACGCAAGTACCTGG...ACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp AGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTGGTCCGACATGGGCGGCCGCGCCCGCTaGCGTCCTCTTGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RFSSSESAKTSASSWSDMGGRAR*RPLVLF
Trigger: GAAGAGAACAAGAGGACGCCAGCGGGCGCGGCCGCC...CATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp CGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTCCTGTCTGAGAAGCCGACTTTCCACTGGCATTTaGCGGCCGCGCCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RSLRHLSLLNDLSCLRSRLSTGI*RPRPLA
Trigger: CGCCAGCGGGCGCGGCCGCCAAATGCCAGTGGAAAG...TCGGCTTCTCAGACAGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp ACCTGCTGGGGACTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGGGGTTGGGCGGGCTaGACGGGGCTCTCGCGGAAT +
Preference number: 4 (lower is better)
Translates to: TCWGLGVEVLVVRVSKDLGGWAG*TGLSRN
Trigger: ATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCC...GAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCAGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR TCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCTGGGGACTCGGTGTTaGGGTTCTCGTCGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVLGTRC*GSRRPS
Trigger: ACTCGGACGACGAGAACCTCAACACCGAGTCCCCAG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTCTGGGGACTCGGTGTTaGGGTTCTCGTCGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASLGTRC*GSRRPS
Trigger: ACTCGGACGACGAGAACCTCAACACCGAGTCCCCAG...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCCCGCCTCTGGCTTCTaGGCTTGGCAGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVPASGF*AWQHRK
Trigger: TTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTGGAAGGAGACCTGGCTaGGGCAGGAACTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASGRRPG*GRNWVC
Trigger: GCAAACCCAGTTCCTGCCTCAGCCAGGTCTCCTTCC...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCCCAGAGAGGAGACGCTaGTCAGAGGCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGPERRR*SEAASS
Trigger: AGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGG...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTCCAGAGAGGAGACGCTaGTCAGAGGCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASPERRR*SEAASS
Trigger: AGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGG...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGCCCGGGGCAGCGGGTaGAGACCTGCTGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCARGSG*RPAGDS
Trigger: CGAGTCCCCAGCAGGTCTGCACCCGCTGCCCCGGGC...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCTGCTTCTCGTGGCTCTaGTCAGCCCTTGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVCFSWL*SALVLV
Trigger: GACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCA...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCTGCTGGGTCAGCACTaGCCAGATCTGCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVLLGQH*PDLPSC
Trigger: ACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAG...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCCTGCTGGGTCAGCACTaGCCAGATCTGCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPLLGQH*PDLPSC
Trigger: ACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAG...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTACTGGGCTGTGCTTGTaGTGGGGCTCCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASTGLCL*WGSQRH
Trigger: ATGCCTCTGGGAGCCCCAGCACAAGCACAGCCCAGT...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACCCAGGGACACAAGGCTaGCCTTATGGGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHPGTQG*PYGTER
Trigger: TCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGG...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCATGAAAGCCGACCATaGAGGCGTGGAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVHESRP*RRGSPT
Trigger: GGTGGGACTTCCACGCCTGCATGGTCGGCTTTCATG...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp GTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCTCCGTTCCTCCACAGGCGTGTaGCCATTGTCCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VEVDLQRGDAAQRLPPLRSSTGV*PLSPVP
Trigger: GGGGACAGGGGACAATGGCCACACGCCTGTGGAGGA...ACGGAGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVSRRSK*TSREET
Trigger: CGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPSRRSK*TSREET
Trigger: CGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGGTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RRSKWTSREETLLRGCLLTSASS*SDMSVS
Trigger: GCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGT...GAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp TGGGACGCCCAGCGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTCCTGTCGGGTGCAGACCTGCTaGGGACTCGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WDAQRSLRHLSLLNDLSCRVQTC*GLGVEV
Trigger: AACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCG...ACAGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGGCCGGTCTCGGGGCTaGCAGAGAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCGRSRG*QRAAPR
Trigger: CCTGGGGGCAGCTCTCTGCCAGCCCCGAGACCGGCC...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCCCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCTTAGAGCTGAGCCTTaGGGAGGGGACCCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPLRAEP*GGDPSE
Trigger: CTCACTAGGGTCCCCTCCCCAAGGCTCAGCTCTAAG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCCCAGAAGTGTGCTCATaGGAAATGGGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPPEVCS*EMGQGA
Trigger: TGCCCCCTGCCCCATTTCCCATGAGCACACTTCTGG...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCCAGAAGTGTGCTCATaGGAAATGGGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPPEVCS*EMGQGA
Trigger: TGCCCCCTGCCCCATTTCCCATGAGCACACTTCTGG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGCGGGTGGCTCAGAAGTaGGAGCAGGTACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGRVAQK*EQVHRR
Trigger: CCTTCTGTGTACCTGCTCCCACTTCTGAGCCACCCG...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCCAGCAGGTGATGGGATaGCTGGGCTTGTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPQQVMG*LGLWPH
Trigger: ATGAGGCCACAAGCCCAGCCATCCCATCACCTGCTG...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR TCA 90 bp AGGAGGTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCCTGGGGACTCGGTGTTaGGGTTCTCGTCGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: RRSKWTSREETLLRGCLLLGTRC*GSRRPS
Trigger: ACTCGGACGACGAGAACCTCAACACCGAGTCCCCAG...GAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCCCGGGCAATGGGATGTaGGCAGAAACGAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSPGNGM*AETRMW
Trigger: CCACATTCTCGTTTCTGCTCACATCCCATTGCCCGG...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTCTGCCCTTATGGGACTaGAAGAGAAAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPLPLWD*KRKLLG
Trigger: GCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAG...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCTGCCCTTATGGGACTaGAAGAGAAAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVLPLWD*KRKLLG
Trigger: GCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAG...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGACCTCCAGAGAGGAGGGCACAGGAGGGGCCTaGCTCGCGCTGGGTAATGAC +
Preference number: 4 (lower is better)
Translates to: MSVSSVRSRRSKWTSREEGTGGA*LALGND
Trigger: GTCATTACCCAGCGCGAGTCAGGCCCCTCCTGTGCC...CTCCTCTCTGGAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR GCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTACGCTGCTCAGAGGCTaGCTCCTCTCCGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCTLLRG*LLSVTC
Trigger: GCAGGTCACGGAGAGGAGGCAGCCTCTGAGCAGCGT...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCTGCTTCTCGTGGCTCTaGTCAGCCCTTGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGCFSWL*SALVLV
Trigger: GACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCA...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGTGCTTCTCGTGGCTCTaGTCAGCCCTTGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVCFSWL*SALVLV
Trigger: GACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCA...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAATCCAGGACTGTGGCCTaGCGCTCGGGGTCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKSRTVA*RSGSPR
Trigger: CCTAGGCGACCCCGAGCGGCAGGCCACAGTCCTGGA...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCTGGCCTAGCAGTGGGTaGAGGACAAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVWPSSG*RTRRGE
Trigger: TTCACCTCTCCTTGTCCTGCACCCACTGCTAGGCCA...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTAAGGAGCTCAGGGCATaGCTGGGGCATCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASKELRA*LGHLQS
Trigger: GCTTTGGAGATGCCCCAGGCATGCCCTGAGCTCCTT...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGAAGGAGCTCAGGGCATaGCTGGGGCATCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVKELRA*LGHLQS
Trigger: GCTTTGGAGATGCCCCAGGCATGCCCTGAGCTCCTT...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGTCTCTTCCAGGTACTTaGGTGTGGGGCGCCGACTGT +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVSLPGT*VWGADC
Trigger: ACAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGA...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS-3UTR GCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGGCCCTCCCACAAGGCTaGTCAGAGCCCCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLALPQG*SEPRGS
Trigger: AGACCCCCGGGGCTCTGAGCAGCCTTGTGGGAGGGC...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568662.2
CDS-3UTR CCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCCCTGTCCCCTGGGCTaGGACGCCCAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDPCPLG*DAQRSL
Trigger: CAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACCCCGGTGCTGGTACTaGGATGCCCCCGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGPRCWY*DAPDLL
Trigger: GAGGAGGTCGGGGGCATCCCAGTACCAGCACCGGGG...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCAGGAGCCCCGGTGCTaGTACTGGGATGCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLQEPRC*YWDAPD
Trigger: GTCGGGGGCATCCCAGTACCAGCACCGGGGCTCCTG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp ACCTCGGCCAGCTCCTGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: TSASSWSDMSVSSVRSRRSRRSK*TSREET
Trigger: CGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA...CCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCTSASS*SDMSVS
Trigger: GCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGT...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGACGTGTCCAGGACTGTaGCCTGCCGCTCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLTCPGL*PAARGR
Trigger: GCGACCCCGAGCGGCAGGCCACAGTCCTGGACACGT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAACGTGTCCAGGACTGTaGCCTGCCGCTCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKTCPGL*PAARGR
Trigger: GCGACCCCGAGCGGCAGGCCACAGTCCTGGACACGT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCGTGAAGTGTGTCTGCTaGGTCAGCACTGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSVKCVC*VSTAQI
Trigger: GATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGGTGAAGTGTGTCTGCTaGGTCAGCACTGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGVKCVC*VSTAQI
Trigger: GATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCTACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCGCAGAAACGAGAATGTaGCCTAGCAGTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSAETRM*PSSGCR
Trigger: CCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGC...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCCAGAAGTGTGCTCATaGGAAATGGGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVPEVCS*EMGQGA
Trigger: TGCCCCCTGCCCCATTTCCCATGAGCACACTTCTGG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTTGGCGGGTGGAAGTGTaGCCAGGGACACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCWRVEV*PGTQGC
Trigger: GCAGCCTTGTGTCCCTGGCCACACTTCCACCCGCCA...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGCGGCTGGTCTCCAAGTaGGGCGAAGACCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLRLVSK*GEDPCP
Trigger: TGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCG...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTGGAAGGAGACCTGGCTaGGGCAGGAACTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCGRRPG*GRNWVC
Trigger: GCAAACCCAGTTCCTGCCTCAGCCAGGTCTCCTTCC...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTCCTGTCTGAGAAGCCGACCAGAGAGGAGACGCTaGTCAGAGGCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSLRHLSLLNDLSCLRSRPERRR*SEAASS
Trigger: AGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGG...TCGGCTTCTCAGACAGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVHGLQT*PASLRA
Trigger: GGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCCTGTCAGCCTCCTCTaGTGCTCCTGGACAGAGACC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCPVSLL*CSWTET
Trigger: GGTCTCTGTCCAGGAGCAGCAGAGGAGGCTGACAGG...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTTGGGTTTGCCAGCAGTaGGGAGGGGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCWVCQQ*GGAAGG
Trigger: GCCACCCGCTGCCCCTCCGCACTGCTGGCAAACCCA...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCAGGGACACAAGGCTaGCCTTATGGGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVPGTQG*PYGTER
Trigger: TCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGG...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGGCTCACTGCAACCTCTaGCCCTTGGGTTTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVAHCNL*PLGLSD
Trigger: ATCGCTCAAACCCAAGGGGCAGAGGTTGCAGTGAGC...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR GCA 90 bp AAGACCTCGGCCAGCTCCTGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGTCTCTTCCAGGTACTTaGGTGTGGGGCGCCGACTGT +
Preference number: 4 (lower is better)
Translates to: KTSASSWSDMSVSSVRSRSLPGT*VWGADC
Trigger: ACAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGA...CCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTTTGTCCCCTGTCCCCTaGGCTGGGACGCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCLSPVP*AGTPSA
Trigger: TGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAA...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGGGCCGGTCTCGGGGCTaGCAGAGAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRGRSRG*QRAAPR
Trigger: CCTGGGGGCAGCTCTCTGCCAGCCCCGAGACCGGCC...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTGGAAAACGCGGAGGTTaGAGCACCCCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCGKRGG*STPRSS
Trigger: GGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCC...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACCCATGTGTGCTTTGCTaGACAGCACATTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHPCVLC*TAHCPI
Trigger: AATGGGACAATGTGCTGTCCAGCAAAGCACACATGG...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCCTTGTAGCCGGGCAATaGGATGTGAGCAGAAACGAG +
Preference number: 4 (lower is better)
Translates to: CCSWTETHGVPWAPNLPSLVAGQ*DVSRNE
Trigger: CTCGTTTCTGCTCACATCCCATTGCCCGGCTACAAG...GCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCTTGTAGCCGGGCAATaGGATGTGAGCAGAAACGAG +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVLVAGQ*DVSRNE
Trigger: CTCGTTTCTGCTCACATCCCATTGCCCGGCTACAAG...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCTCAGCATATAAGCATTaGGAGGGTGTGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPSAYKH*EGVSWG
Trigger: GCCCCAGCTCACACCCTCCCAATGCTTATATGCTGA...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAACCAGGTACTTGCGTGTaGGGCGCCGACTGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKPGTCV*GADCVR
Trigger: CCGCACACAGTCGGCGCCCCACACGCAAGTACCTGG...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS-3UTR CCA 90 bp CTGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGACCTCCCGAGTGCTGTGTCATaGCATGGCCCGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVRHVGELSEVQEVEVDLPSAVS*HGPFQA
Trigger: GGCCTGAAACGGGCCATGCCATGACACAGCACTCGG...GAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR TCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTGGTCCGACATGTCGGTGACGATCTCTCCTGTCTaGGAAGCCGAGTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SSSESAKTSASSWSDMSVTISPV*EAECCV
Trigger: GACACAGCACTCGGCTTCTCAGACAGGAGAGATCGT...CACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR GCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAGCGGGTGCAGACCTaGTGGGGACTCGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGQRVQT*WGLGVE
Trigger: CTCAACACCGAGTCCCCAGCAGGTCTGCACCCGCTG...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTGGGTCGCCTAGGGGCTaGTTCTCGTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLGSPRG*FSWLCS
Trigger: TGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCC...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGATGGGTTTGCCAGCAGTaGGGAGGGGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRWVCQQ*GGAAGG
Trigger: GCCACCCGCTGCCCCTCCGCACTGCTGGCAAACCCA...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTTGGGTTTGCCAGCAGTaGGGAGGGGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLWVCQQ*GGAAGG
Trigger: GCCACCCGCTGCCCCTCCGCACTGCTGGCAAACCCA...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGGGCAGGAACTGGGTTTaGCAGCAGTGCGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLGRNWV*QQCGGA
Trigger: TGCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCC...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGTCCTCCACAGGCGTGTaGCCATTGTCCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLSSTGV*PLSPVP
Trigger: GGGGACAGGGGACAATGGCCACACGCCTGTGGAGGA...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCCCCGGTGCTGGTACTaGGATGCCCCCGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLPRCWY*DAPDLL
Trigger: GAGGAGGTCGGGGGCATCCCAGTACCAGCACCGGGG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCAGGAGCCCCGGTGCTaGTACTGGGATGCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLQEPRC*YWDAPD
Trigger: GTCGGGGGCATCCCAGTACCAGCACCGGGGCTCCTG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCACGTGTCCAGGACTGTaGCCTGCCGCTCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPATCPGL*PAARGR
Trigger: GCGACCCCGAGCGGCAGGCCACAGTCCTGGACACGT...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGGCCGGTCTCGGGGCTaGCAGAGAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLGRSRG*QRAAPR
Trigger: CCTGGGGGCAGCTCTCTGCCAGCCCCGAGACCGGCC...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGATGGAAATCAAGGTaGGAATTTTGGGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPGWKSR*EFWGRF
Trigger: GAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCC...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACCAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHQSGDI*CSELRR
Trigger: CCTCCTTAGCTCAGAACACCAAATATCACCAGACTG...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAATGGCGGGTGGAAGTGTaGCCAGGGACACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKWRVEV*PGTQGC
Trigger: GCAGCCTTGTGTCCCTGGCCACACTTCCACCCGCCA...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGAAGACCCTGGCGGGTaGAAGTGTGGCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGEDPGG*KCGQGH
Trigger: GTGTCCCTGGCCACACTTCCACCCGCCAGGGTCTTC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTGAAGACCCTGGCGGGTaGAAGTGTGGCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLEDPGG*KCGQGH
Trigger: GTGTCCCTGGCCACACTTCCACCCGCCAGGGTCTTC...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAGAAGACCCTGGCGGGTaGAAGTGTGGCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKEDPGG*KCGQGH
Trigger: GTGTCCCTGGCCACACTTCCACCCGCCAGGGTCTTC...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGACCTCCAGAGAGGATTTCCACCTTTCCACTaGCATTTGGCGGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: HVGELSEVQEVEVDLQRGFPPFH*HLAAAP
Trigger: GGGCGCGGCCGCCAAATGCCAGTGGAAAGGTGGAAA...TCCTCTCTGGAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CCA 90 bp TCCAGGAGGTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCGGCTCTCGCGGAATCTaGTTTCCACCTTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SRRSKWTSREETLLRGCLGSRGI*FPPFHW
Trigger: CCAGTGGAAAGGTGGAAACCAGATTCCGCGAGAGCC...GAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR TCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCCCGCCTCTGGCTTCTaGGCTTGGCAGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLPASGF*AWQHRK
Trigger: TTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGACCCAGACAAGGGGTTaGGGGGCTTCAAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLTQTRG*GASRRL
Trigger: CAGCCTCCTTGAAGCCCCTCAACCCCTTGTCTGGGT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACTCCTCTCCGTGACCTaGAGGAGCCCCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRLLSVT*RSPGAG
Trigger: ACCAGCACCGGGGCTCCTGCAGGTCACGGAGAGGAG...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACATCCAGGACTGTGGCCTaGCGCTCGGGGTCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTSRTVA*RSGSPR
Trigger: CCTAGGCGACCCCGAGCGGCAGGCCACAGTCCTGGA...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTTCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCC +
Preference number: 4 (lower is better)
Translates to: APGQRPTGSHGLQTCPASSPCVL*WTAHCP
Trigger: GGGACAATGTGCTGTCCAGCAAAGCACACATGGAGA...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACCTGTCAGCCTCCTCTaGTGCTCCTGGACAGAGACC +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGPVSLL*CSWTET
Trigger: GGTCTCTGTCCAGGAGCAGCAGAGGAGGCTGACAGG...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACATGGGTTTGCCAGCAGTaGGGAGGGGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTWVCQQ*GGAAGG
Trigger: GCCACCCGCTGCCCCTCCGCACTGCTGGCAAACCCA...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAACGGGTGCAGACCTGCTaGGGACTCGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKRVQTC*GLGVEV
Trigger: AACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCG...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAAGGGGCTGCTTCTCGTaGCTCTGCTCAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGRGCFS*LCSALV
Trigger: GACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCT...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAAGGGGCTGCTTCTCGTaGCTCTGCTCAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKRGCFS*LCSALV
Trigger: GACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACGGGCTGTGCTTGTGCTaGGGCTCCCAGAGGCATCCG +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDGLCLC*GSQRHP
Trigger: CGGATGCCTCTGGGAGCCCCAGCACAAGCACAGCCC...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGGGAAAACGCGGAGGTTaGAGCACCCCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLGKRGG*STPRSS
Trigger: GGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCC...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGGAAAACGCGGAGGTTaGAGCACCCCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGGKRGG*STPRSS
Trigger: GGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTTACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGCCATGTGTGCTTTGCTaGACAGCACATTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGPCVLC*TAHCPI
Trigger: AATGGGACAATGTGCTGTCCAGCAAAGCACACATGG...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGAGACAGCGCCTCCGTaGAGTAGAAGAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGETAPP*SRRRGR
Trigger: CCTGCCCCTTCTTCTACTCCACGGAGGCGCTGTCTC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTTGGCGGGTGGAAGTGTaGCCAGGGACACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCWRVEV*PGTQGC
Trigger: GCAGCCTTGTGTCCCTGGCCACACTTCCACCCGCCA...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACACCGACCATGCAGGCGTaGAAGTCCCACCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTPTMQA*KSHQGP
Trigger: CGGGCCCTGGTGGGACTTCCACGCCTGCATGGTCGG...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp CATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTGGACCTCCAGAGAGGAGGGCCTGACTCGCGCTaGGTAATGACAGACTCACAG +
Preference number: 4 (lower is better)
Translates to: HVGELSEVQEVEVDLQRGGPDSR*VMTDSQ
Trigger: CTGTGAGTCTGTCATTACCCAGCGCGAGTCAGGCCC...TCCTCTCTGGAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACAGCCTCGTGGGCGGGTaGAGTGTGTCTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDSLVGG*SVSAGS
Trigger: TGACCCAGCAGACACACTTCACCCGCCCACGAGGCT...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCGTGACGCTGTCTTCCTaGCTCGGGGCCCAGGAACGA +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPAVTLSS*LGAQER
Trigger: TCGTTCCTGGGCCCCGAGTCAGGAAGACAGCGTCAC...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTGCCGTCCTGGCCTCTaGTTTCTAGCTCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPACRPGL*FLARPR
Trigger: CCTGGGCCGAGCTAGAAATCAGAGGCCAGGACGGCA...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR TCA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCAGTGAACAAGGAATCTaGGATCCAGATCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPSEQGI*DPDHLW
Trigger: CCAAAGGTGATCTGGATCTCAGATTCCTTGTTCACT...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR GCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRTPSAA*GTSASL
Trigger: TAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGT...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGCTCCTCTCCGTGACCTaGAGGAGCCCCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRLLSVT*RSPGAG
Trigger: ACCAGCACCGGGGCTCCTGCAGGTCACGGAGAGGAG...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCACGCTGCTCAGAGGCTaGCTCCTCTCCGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPATLLRG*LLSVTC
Trigger: GCAGGTCACGGAGAGGAGGCAGCCTCTGAGCAGCGT...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCAGCGGGTGCAGACCTaGTGGGGACTCGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDQRVQT*WGLGVE
Trigger: CTCAACACCGAGTCCCCAGCAGGTCTGCACCCGCTG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGCCCGGGGCAGCGGGTaGAGACCTGCTGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELARGSG*RPAGDS
Trigger: CGAGTCCCCAGCAGGTCTGCACCCGCTGCCCCGGGC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTGGGTCGCCTAGGGGCTaGTTCTCGTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLGSPRG*FSWLCS
Trigger: TGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCC...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCGGGTCGCCTAGGGGCTaGTTCTCGTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPAGSPRG*FSWLCS
Trigger: TGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCC...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKSTAQI*HRVRTP
Trigger: TGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLSTAQI*HRVRTP
Trigger: TGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGCTGCTGGGTCAGCACTaGCCAGATCTGCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLLLGQH*PDLPSC
Trigger: ACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAG...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAAAGGCCACTGGGCTGTaGTTGTGCTGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGKATGL*LCWGSQ
Trigger: CTGGGAGCCCCAGCACAAGCACAGCCCAGTGGCCTT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCACTCATTCTTTGACTTaGTGTCAGGCAAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVTHSLT*CQARSP
Trigger: TGGGCTTCTTGCCTGACAGCAAGTCAAAGAATGAGT...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCTTTAATCCCCCTGTTTaGAAACGAGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRLEHPQEFLEWLSQAWVFNPPV*KRALWK
Trigger: CTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAA...GACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCCTCCACAGGCGTGTaGCCATTGTCCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPASSTGV*PLSPVP
Trigger: GGGGACAGGGGACAATGGCCACACGCCTGTGGAGGA...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLSRRSK*TSREET
Trigger: CGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPATSASS*SDMSVS
Trigger: GCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGT...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGGCCGGTCTCGGGGCTaGCAGAGAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELGRSRG*QRAAPR
Trigger: CCTGGGGGCAGCTCTCTGCCAGCCCCGAGACCGGCC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCCATGTGTGCTTTGCTaGACAGCACATTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVPCVLC*TAHCPI
Trigger: AATGGGACAATGTGCTGTCCAGCAAAGCACACATGG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCTTGTAGCCGGGCAATaGGATGTGAGCAGAAACGAG +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCLVAGQ*DVSRNE
Trigger: CTCGTTTCTGCTCACATCCCATTGCCCGGCTACAAG...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGAGGCTGGCTTGGGGATaGAAAGTAAGCTTACACTTT +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGRLAWG*KVSLHF
Trigger: AAAGTGTAAGCTTACTTTCCATCCCCAAGCCAGCCT...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAACGGGTGGCTCAGAAGTaGGAGCAGGTACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKRVAQK*EQVHRR
Trigger: CCTTCTGTGTACCTGCTCCCACTTCTGAGCCACCCG...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTATTCCAGTGCCGTCCTaGCCTCTGATTTCTAGCTCG +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCIPVPS*PLISSS
Trigger: CGAGCTAGAAATCAGAGGCCAGGACGGCACTGGAAT...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCGATCCAGATCACCTTTaGTACGCAAGCACCCATGAA +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGDPDHL*YASTHE
Trigger: TTCATGGGTGCTTGCGTACCAAAGGTGATCTGGATC...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
3UTR CAA 72 bp ATTAGCCACTACCAAACCCGCCTCTGGCTTCTGAGCTaGGCAGCACAGGAAAACGCGGAGGTTGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: ISHYQTRLWLLS*AAQENAEVGAP
Trigger: GGGTGCTCCAACCTCCGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTAGTGGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCTGGGGACTCGGTGTTaGGGTTCTCGTCGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDLGTRC*GSRRPS
Trigger: ACTCGGACGACGAGAACCTCAACACCGAGTCCCCAG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAGGGGCCTCTCCACAGTaGGAAACGTGTCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGGASPQ*ETCPGL
Trigger: CAGTCCTGGACACGTTTCTCACTGTGGAGAGGCCCC...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAGTGTGTGTCAGGAGGTaGCGGCTGGAGCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGVCVRR*RLEPRG
Trigger: CCCACGAGGCTCCAGCCGTCACCTCCTGACACACAC...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCCCGCCTCTGGCTTCTaGGCTTGGCAGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLPASGF*AWQHRK
Trigger: TTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACTGCCCTTATGGGACTaGAAGAGAAAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGLPLWD*KRKLLG
Trigger: GCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAG...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCTGCCCTTATGGGACTaGAAGAGAAAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLLPLWD*KRKLLG
Trigger: GCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGCTGCCCTTATGGGACTaGAAGAGAAAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLLPLWD*KRKLLG
Trigger: GCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAG...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAAGGCCTGCCATTCTGTaGTCCCTTAGCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKRPAIL*SLSHQP
Trigger: TGGTTGGTGGCTAAGGGATCACAGAATGGCAGGCCT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304733.8
ENST00000392973.8
CDS-3UTR TCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGTCTGCCCCTTGGGTTTaGGCGATTCTCCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLSAPWV*AILLPH
Trigger: ATGAGGCAGGAGAATCGCTCAAACCCAAGGGGCAGA...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR TCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACGTACGCAAGCACCCATaGAAGCCGACCATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDVRKHP*KPTMQA
Trigger: CGCCTGCATGGTCGGCTTTCATGGGTGCTTGCGTAC...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRTPSAA*GTSASL
Trigger: TAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGT...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGTGCTGGTACTGGGATaGCCCCGACCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTVLVLG*PRPPPP
Trigger: TGGAGGAGGAGGTCGGGGGCATCCCAGTACCAGCAC...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCCAGAGAGGAGACGCTaGTCAGAGGCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDPERRR*SEAASS
Trigger: AGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGCAGCGGGTGCAGACCTaGTGGGGACTCGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRQRVQT*WGLGVE
Trigger: CTCAACACCGAGTCCCCAGCAGGTCTGCACCCGCTG...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGGGCTGGCAGAGAGCTaGCCCCAGGGTGTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLGLAES*PQGVCQ
Trigger: CTGACACACACCCTGGGGGCAGCTCTCTGCCAGCCC...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCCTGTCAGCCTCCTCTaGTGCTCCTGGACAGAGACC +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLPVSLL*CSWTET
Trigger: GGTCTCTGTCCAGGAGCAGCAGAGGAGGCTGACAGG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCCCAGAGAGGAGACGCTaGTCAGAGGCTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPAPERRR*SEALRA
Trigger: TGCCCTCAGAGCCTCTGAGCAGCGTCTCCTCTCTGG...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568662.2
CDS-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRTSASS*SDMSVS
Trigger: GCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGT...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTTSASS*SDMSVS
Trigger: GCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGT...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGACGGGTGCAGACCTGCTaGGGACTCGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGRVQTC*GLGVEV
Trigger: AACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCG...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACGGGTGCAGACCTGCTaGGGACTCGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRRVQTC*GLGVEV
Trigger: AACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCG...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTAGGGGCTGCTTCTCGTaGCTCTGCTCAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLRGCFS*LCSALV
Trigger: GACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCT...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAGTGAAGTGTGTCTGCTaGGTCAGCACTGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKVKCVC*VSTAQI
Trigger: GATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGTGAAGTGTGTCTGCTaGGTCAGCACTGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGVKCVC*VSTAQI
Trigger: GATCTGGGCAGTGCTGACCCAGCAGACACACTTCAC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAACCCCAAGGCCGCCGTaGGCCACTCCATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLTPRPP*ATPFLS
Trigger: GCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGTACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTTCAAGGTGGGAATTTTaGGGCCGCTTCTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCSRWEF*GRFSMC
Trigger: ACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGA...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAGAGACAGCGCCTCCGTaGAGTAGAAGAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRETAPP*SRRRGR
Trigger: CCTGCCCCTTCTTCTACTCCACGGAGGCGCTGTCTC...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAAGCCGGCTGGTCTCCAAGTGAGGCGAAGACCCGTGCCCAGCAGACAAGGCCAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKPAGLQVRRRPVPSRQGQSGDI*CSELRR
Trigger: CCTCCTTAGCTCAGAACACCAAATATCACCAGACTG...GCCTTGTCTGCTGGGCACGGGTCTTCGCCTCACTTGGAGACCAGCCGGCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGAGGCTGGCTTGGGGATaGAAAGTAAGCTTACACTTT +
Preference number: 4 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVRLAWG*KVSLHF
Trigger: AAAGTGTAAGCTTACTTTCCATCCCCAAGCCAGCCT...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTACTCCTTAACGATCTTTaGCGGCCGCGCCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLLLNDL*RPRPLA
Trigger: CGCCAGCGGGCGCGGCCGCCAAAGATCGTTAAGGAG...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS-3UTR TCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGGGGCCTCTCCACAGTaGGAAACGTGTCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTGASPQ*ETCPGL
Trigger: CAGTCCTGGACACGTTTCTCACTGTGGAGAGGCCCC...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGGCACGTTCCTGGCAGTaGCTCCGTGACGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRARSWQ*LRDAVF
Trigger: GAAGACAGCGTCACGGAGTCACTGCCAGGAACGTGC...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTGACACAGTGTCACCTTaGGATCCACAGGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLDTVSP*DPQGSH
Trigger: GTGGGAGCCCTGTGGATCTCAAGGTGACACTGTGTC...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGGTGCTGGTACTGGGATaGCCCCGACCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRVLVLG*PRPPPP
Trigger: TGGAGGAGGAGGTCGGGGGCATCCCAGTACCAGCAC...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTACTGCAGGAGCCCCGGTaGTGGTACTGGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELLQEPR*WYWDAP
Trigger: GGGGGCATCCCAGTACCAGCACCGGGGCTCCTGCAG...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAACGCTGCTCAGAGGCTaGCTCCTCTCCGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLTLLRG*LLSVTC
Trigger: GCAGGTCACGGAGAGGAGGCAGCCTCTGAGCAGCGT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGATGCTTCTCGTGGCTCTaGTCAGCCCTTGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGCFSWL*SALVLV
Trigger: GACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCA...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGGGGTCGCCTAGGGGCTaGTTCTCGTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRGSPRG*FSWLCS
Trigger: TGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCC...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTATCCAGGACTGTGGCCTaGCGCTCGGGGTCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELSRTVA*RSGSPR
Trigger: CCTAGGCGACCCCGAGCGGCAGGCCACAGTCCTGGA...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACACGGGTGAAGTGTGTCTaGTGGGTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTRVKCV*WVSTAQ
Trigger: CTGGGCAGTGCTGACCCAGCAGACACACTTCACCCG...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTCATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCHGLQT*PASLRA
Trigger: GGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATG...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAAAGGAGCTCAGGGCATaGCTGGGGCATCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRKELRA*LGHLQS
Trigger: GCTTTGGAGATGCCCCAGGCATGCCCTGAGCTCCTT...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGGCAGGAACTGGGTTTaGCAGCAGTGCGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLGRNWV*QQCGGA
Trigger: TGCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCC...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTATTGTCCCCTGTCCCCTaGGCTGGGACGCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELLSPVP*AGTPSA
Trigger: TGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAA...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPASRRSK*TSREET
Trigger: CGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGACCTCGGCCAGCTCCTaGTCCGACATGTCGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRTSASS*SDMSVS
Trigger: GCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGT...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACACCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGAGACAGCGCCTCCGTaGAGTAGAAGAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTETAPP*SRRRGR
Trigger: CCTGCCCCTTCTTCTACTCCACGGAGGCGCTGTCTC...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCTTAGAGCTGAGCCTTaGGGAGGGGACCCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLLRAEP*GGDPSE
Trigger: CTCACTAGGGTCCCCTCCCCAAGGCTCAGCTCTAAG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGCAGAAACGAGAATGTaGCCTAGCAGTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCAETRM*PSSGCR
Trigger: CCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGC...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCCAGAAGTGTGCTCATaGGAAATGGGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDPEVCS*EMGQGA
Trigger: TGCCCCCTGCCCCATTTCCCATGAGCACACTTCTGG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTGAAAGAGAAAGCTGCTaGGCTCTGTGTGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCERESC*ALCDWK
Trigger: TTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTC...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGGAAGACCCTGGCGGGTaGAAGTGTGGCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGREDPGG*KCGQGH
Trigger: GTGTCCCTGGCCACACTTCCACCCGCCAGGGTCTTC...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGCCCGCCTCTGGCTTCTaGGCTTGGCAGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRPASGF*AWQHRK
Trigger: TTTCCTGTGCTGCCAAGCTCAGAAGCCAGAGGCGGG...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGACCGGGCAATGGGATGTaGGCAGAAACGAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGPGNGM*AETRMW
Trigger: CCACATTCTCGTTTCTGCTCACATCCCATTGCCCGG...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCCGGGCAATGGGATGTaGGCAGAAACGAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLPGNGM*AETRMW
Trigger: CCACATTCTCGTTTCTGCTCACATCCCATTGCCCGG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTATTAAACTCATTCTTTaGCTTGCTGTCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPIKLIL*LAVRQE
Trigger: TTCTTGCCTGACAGCAAGTCAAAGAATGAGTTTAAT...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGATTAAACTCATTCTTTaGCTTGCTGTCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SGPRNELDVRPLGCACAGIKLIL*LAVRQE
Trigger: TTCTTGCCTGACAGCAAGTCAAAGAATGAGTTTAAT...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTAGGCCTGCCATTCTGTaGTCCCTTAGCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLRPAIL*SLSHQP
Trigger: TGGTTGGTGGCTAAGGGATCACAGAATGGCAGGCCT...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304733.8
ENST00000392973.8
CDS-3UTR TCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGGCAGTGACCAGCAGGTaGTGGGATGGCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRAVTSR*WDGWAC
Trigger: ACAAGCCCAGCCATCCCATCACCTGCTGGTCACTGC...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR GCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGCCTAGCAGTGGGTaGAGGACAAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDWPSSG*RTRRGE
Trigger: TTCACCTCTCCTTGTCCTGCACCCACTGCTAGGCCA...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTTGGCCTAGCAGTGGGTaGAGGACAAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLWPSSG*RTRRGE
Trigger: TTCACCTCTCCTTGTCCTGCACCCACTGCTAGGCCA...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRHGLQT*PASLRA
Trigger: GGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATG...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGACTGAAAGAGAAAGCTaGTGGGCTCTGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLTERES*WALCDW
Trigger: CCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTCCAGGGACACAAGGCTaGCCTTATGGGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GTQGCPYGTERESCWALCPGTQG*PYGTER
Trigger: TCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGG...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCTTAGCCACCAACCATaGCTCACAGTTGAGCAAATA +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCLSHQP*LTVEQI
Trigger: TATTTGCTCAACTGTGAGGCATGGTTGGTGGCTAAG...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304733.8
ENST00000392973.8
CDS-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGAGGGGCTGCTTCTCGTaGCTCTGCTCAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRRGCFS*LCSALV
Trigger: GACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCT...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAACCCCCAGGAGTTCCTaGAGTGGCTGTCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGTPRSS*SGCHRP
Trigger: AGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGT...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCQSGDI*CSELRR
Trigger: CCTCCTTAGCTCAGAACACCAAATATCACCAGACTG...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACGCAGAAACGAGAATGTaGCCTAGCAGTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDAETRM*PSSGCR
Trigger: CCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGC...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAGCAGAAACGAGAATGTaGCCTAGCAGTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRAETRM*PSSGCR
Trigger: CCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGC...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTAGGCTGGCTTGGGGATaGAAAGTAAGCTTACACTTT +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCRLAWG*KVSLHF
Trigger: AAAGTGTAAGCTTACTTTCCATCCCCAAGCCAGCCT...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAATCCCCCTGAGTAGATaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKIPLSR*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCATCTACTCAGGGGGAT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGCTGGGTGTGAGGACTTaGCACATCCAGTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLLGVRT*HIQSFE
Trigger: TTCAAAGGACTGGATGTGCCAAGTCCTCACACCCAG...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR TCA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCAT +
Preference number: 4 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCKKPIL*ASAYKH
Trigger: ATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTT...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGATGCTTCTCGTGGCTCTaGTCAGCCCTTGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGCFSWL*SALVLV
Trigger: GACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCA...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLSTAQI*HRVRTP
Trigger: TGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAAGCACTGCCCAGATCTaGCATCGTGTTCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGSTAQI*HRVRTP
Trigger: TGGGGTCCGAACACGATGGCAGATCTGGGCAGTGCT...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTACTGCTGGGTCAGCACTaGCCAGATCTGCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLLLGQH*PDLPSC
Trigger: ACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAG...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAAAGGAGCTCAGGGCATaGCTGGGGCATCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGKELRA*LGHLQS
Trigger: GCTTTGGAGATGCCCCAGGCATGCCCTGAGCTCCTT...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCGAGCTAAGGAGGGAATaGACTTGTCTGTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPAELRRE*TCLSRR
Trigger: CCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTC...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCTTGTAGCCGGGCAATaGGATGTGAGCAGAAACGAG +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLLVAGQ*DVSRNE
Trigger: CTCGTTTCTGCTCACATCCCATTGCCCGGCTACAAG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCAGCATATAAGCATTaGGAGGGTGTGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HVCFAGQHIVPLATTKPASAYKH*EGVSWG
Trigger: GCCCCAGCTCACACCCTCCCAATGCTTATATGCTGA...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTCAGCATATAAGCATTaGGAGGGTGTGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDSAYKH*EGVSWG
Trigger: GCCCCAGCTCACACCCTCCCAATGCTTATATGCTGA...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACCAGAAGTGTGCTCATaGGAAATGGGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGPEVCS*EMGQGA
Trigger: TGCCCCCTGCCCCATTTCCCATGAGCACACTTCTGG...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTGAAAGAGAAAGCTGCTaGGCTCTGTGTGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLERESC*ALCDWK
Trigger: TTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTC...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGGAAAGAGAAAGCTGCTaGGCTCTGTGTGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLERESC*ALCDWK
Trigger: TTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTC...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCCATGTCCAGCCTCTTaGTCCCCTTCAAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDPCPAS*SPSNQN
Trigger: GTTCTGGTTTGAAGGGGACCAAGAGGCTGGACATGG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACTGAAGGATCGCCCATaGATTTCCATGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRLKDRP*ISMSSL
Trigger: GAGGCTGGACATGGAAATCCATGGGCGATCCTTCAG...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
3UTR CAA 72 bp AGAAGAAGGGGCAGGATGGAAATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RRRGRMEIKVGI*GPLLHVCFAGQ
Trigger: CTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCCTGCCCCTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTACTGGGGACTCGGTGTTaGGGTTCTCGTCGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELLGTRC*GSRRPS
Trigger: ACTCGGACGACGAGAACCTCAACACCGAGTCCCCAG...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGATCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRSPCVL*WTAHCP
Trigger: GGGACAATGTGCTGTCCAGCAAAGCACACATGGAGA...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTATGGCCTAGCAGTGGGTaGAGGACAAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLWPSSG*RTRRGE
Trigger: TTCACCTCTCCTTGTCCTGCACCCACTGCTAGGCCA...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTACATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLHGLQT*PASLRA
Trigger: GGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATG...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGCATGGGCTCCAAACCTaGCCAGCAAGTTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRHGLQT*PASLRA
Trigger: GGCCCTTAAACTTGCTGGGCAGGTTTGGAGCCCATG...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAACTCATTCTTTGACTTaGTGTCAGGCAAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGTHSLT*CQARSP
Trigger: TGGGCTTCTTGCCTGACAGCAAGTCAAAGAATGAGT...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACACCAGGGACACAAGGCTaGCCTTATGGGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTPGTQG*PYGTER
Trigger: TCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGG...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGATTTAATCCCCCTGTTTaGAAACGAGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGFNPPV*KRALWK
Trigger: CTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAA...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGCTTAGCCACCAACCATaGCTCACAGTTGAGCAAATA +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLLSHQP*LTVEQI
Trigger: TATTTGCTCAACTGTGAGGCATGGTTGGTGGCTAAG...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304733.8
ENST00000392973.8
CDS-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTACGGGTGCAGACCTGCTaGGGACTCGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELRVQTC*GLGVEV
Trigger: AACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCG...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTACCCAGGAAAGCCGGCTaGTCTCCAAGTGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELPRKAG*SPSEAK
Trigger: CTTCGCCTCACTTGGAGACCAGCCGGCTTTCCTGGG...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTATACCAAACCCGCCTCTaGCTTCTGAGCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLYQTRL*LLSLAA
Trigger: TGCTGCCAAGCTCAGAAGCCAGAGGCGGGTTTGGTA...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTTCAAGGTGGGAATTTTaGGGCCGCTTCTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLSRWEF*GRFSMC
Trigger: ACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGA...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGATCAAGGTGGGAATTTTaGGGCCGCTTCTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRSRWEF*GRFSMC
Trigger: ACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGA...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGCAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RESCWALCDWKPGKETWLQSGDI*CSELRR
Trigger: CCTCCTTAGCTCAGAACACCAAATATCACCAGACTG...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTCAGTCTGGTGATATTTaGTGTTCTGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLQSGDI*CSELRR
Trigger: CCTCCTTAGCTCAGAACACCAAATATCACCAGACTG...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGGCAGAAACGAGAATGTaGCCTAGCAGTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRAETRM*PSSGCR
Trigger: CCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGC...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCAT +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLKKPIL*ASAYKH
Trigger: ATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTT...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTACTGCTGGGTCAGCACTaGCCAGATCTGCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELLLGQH*PDLPSC
Trigger: ACACGATGGCAGATCTGGGCAGTGCTGACCCAGCAG...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACATCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCC +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTSPCVL*WTAHCP
Trigger: GGGACAATGTGCTGTCCAGCAAAGCACACATGGAGA...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGTCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCC +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRSPCVL*WTAHCP
Trigger: GGGACAATGTGCTGTCCAGCAAAGCACACATGGAGA...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACCAGGGACACAAGGCTaGCCTTATGGGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGPGTQG*PYGTER
Trigger: TCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCCTGG...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTATCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELSRRSK*TSREET
Trigger: CGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGA...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACCCATGTGTGCTTTGCTaGACAGCACATTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: TQGCPYGTERESCWALCDPCVLC*TAHCPI
Trigger: AATGGGACAATGTGCTGTCCAGCAAAGCACACATGG...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGGGATGGAAATCAAGGTaGGAATTTTGGGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRGWKSR*EFWGRF
Trigger: GAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCC...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGAGCTAAGGAGGGAATaGACTTGTCTGTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLELRRE*TCLSRR
Trigger: CCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTC...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAGAGCTAAGGAGGGAATaGACTTGTCTGTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGELRRE*TCLSRR
Trigger: CCTGCGTGACAGACAAGTCCATTCCCTCCTTAGCTC...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGTCAGCATATAAGCATTaGGAGGGTGTGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRSAYKH*EGVSWG
Trigger: GCCCCAGCTCACACCCTCCCAATGCTTATATGCTGA...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTACGGGTGGCTCAGAAGTaGGAGCAGGTACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELRVAQK*EQVHRR
Trigger: CCTTCTGTGTACCTGCTCCCACTTCTGAGCCACCCG...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGGGCCTGACTCGCGCTaGGTAATGACAGACTCACAG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELGPDSR*VMTDSQ
Trigger: CTGTGAGTCTGTCATTACCCAGCGCGAGTCAGGCCC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAACTCATTCTTTGACTTaGTGTCAGGCAAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGTHSLT*CQARSP
Trigger: TGGGCTTCTTGCCTGACAGCAAGTCAAAGAATGAGT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAACTGAAAGAGAAAGCTaGTGGGCTCTGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGTERES*WALCDW
Trigger: CCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGT...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGATTTAATCCCCCTGTTTaGAAACGAGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRFNPPV*KRALWK
Trigger: CTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAA...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGATCAAGGTGGGAATTTTaGGGCCGCTTCTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGSRWEF*GRFSMC
Trigger: ACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGA...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAGGATGGAAATCAAGGTaGGAATTTTGGGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGGWKSR*EFWGRF
Trigger: GAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCC...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGGGATGGAAATCAAGGTaGGAATTTTGGGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRGWKSR*EFWGRF
Trigger: GAAGCGGCCCCAAAATTCCCACCTTGATTTCCATCC...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAAGGCTGGCTTGGGGATaGAAAGTAAGCTTACACTTT +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGRLAWG*KVSLHF
Trigger: AAAGTGTAAGCTTACTTTCCATCCCCAAGCCAGCCT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGAAAGAGAAAGCTGCTaGGCTCTGTGTGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTERESC*ALCDWK
Trigger: TTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTC...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCAT +
Preference number: 4 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRKKPIL*ASAYKH
Trigger: ATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTT...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGAAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCAT +
Preference number: 4 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGKKPIL*ASAYKH
Trigger: ATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTT...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTATTAAACTCATTCTTTaGCTTGCTGTCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLIKLIL*LAVRQE
Trigger: TTCTTGCCTGACAGCAAGTCAAAGAATGAGTTTAAT...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTACCATGTGTGCTTTGCTaGACAGCACATTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLPCVLC*TAHCPI
Trigger: AATGGGACAATGTGCTGTCCAGCAAAGCACACATGG...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CCA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGAGAAAGAGAAAGCTGCTaGGCTCTGTGTGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGERESC*ALCDWK
Trigger: TTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTC...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR TCA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGAAGAAGCCCATTCTGTaGGCTTCAGCATATAAGCAT +
Preference number: 4 (lower is better)
Translates to: DALIPLFANELCGSSAGRKKPIL*ASAYKH
Trigger: ATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTT...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTATCTCCATGTGTGCTTTaGTGGACAGCACATTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELSPCVL*WTAHCP
Trigger: GGGACAATGTGCTGTCCAGCAAAGCACACATGGAGA...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGACTCATTCTTTGACTTaGTGTCAGGCAAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRTHSLT*CQARSP
Trigger: TGGGCTTCTTGCCTGACAGCAAGTCAAAGAATGAGT...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAACTGAAAGAGAAAGCTaGTGGGCTCTGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELTERES*WALCDW
Trigger: CCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGT...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGTTTAATCCCCCTGTTTaGAAACGAGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRFNPPV*KRALWK
Trigger: CTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAA...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTATTTAATCCCCCTGTTTaGAAACGAGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLFNPPV*KRALWK
Trigger: CTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAA...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR GCA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGCTCCTTAACGATCTCTaGATCCAAAGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: CCQARSPFCELQHISIGRLLNDL*IQRHSV
Trigger: GACACTGTGTCTTTGGATGCAGAGATCGTTAAGGAG...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR TCA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAATTAAACTCATTCTTTaGCTTGCTGTCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLIKLIL*LAVRQE
Trigger: TTCTTGCCTGACAGCAAGTCAAAGAATGAGTTTAAT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS CCA 90 bp CCGCGCCCGCTGGCGTCCTCTTGTTCTCTTCCAGGTACTTGCGTGTaGGGCGCCGACTGTGTGCGGGCGCCCCTCGGGGCTGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: PRPLASSCSLPGTCV*GADCVRAPLGAGEG
Trigger: CCCCTCGCCAGCCCCGAGGGGCGCCCGCACACAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGGCGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568330.2
ENST00000568838.2
CDS GCA 90 bp TGGCCATTGTCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTCTCCGGTGCCGGCGCCC +
Preference number: 5 (lower is better)
Translates to: WPLSPVPWAGTPSAA*GTSASLTISPVPAP
Trigger: GGGCGCCGGCACCGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAATGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002501.11
CDS GCA 90 bp TGGCCATTGTCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTTTGGCGGCCGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: WPLSPVPWAGTPSAA*GTSASLTIFGGRAR
Trigger: GCGGGCGCGGCCGCCAAAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAATGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS GCA 90 bp CTCGGTGTGGCTGAGAGGCCTGGGTGGATGCTGCGGAGCTCCAGGTaGCGCCGGCCTCCTGCGCCACTCCTGCCAATGCTCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LGVAERPGWMLRSSR*RRPPAPLLPMLCTS
Trigger: GCTGGTGCAGAGCATTGGCAGGAGTGGCGCAGGAGGCCGGCGGCACCTGGAGCTCCGCAGCATCCACCCAGGCCTCTCAGCCACACCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS CCA 90 bp TCAGGCCTGGGGGTTGGGCGGGCTGGACGGGGCTCTCGCGGAATCTaGTTTCCACCTTTCCACTGGCATTTGGCGGCCGCGCCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: SGLGVGRAGRGSRGI*FPPFHWHLAAAPAG
Trigger: GCCAGCGGGCGCGGCCGCCAAATGCCAGTGGAAAGGTGGAAACCAGATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CAA 90 bp CTCGGCCAGCTCCTGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCCCTTTCCACTGGCATTaGGCGGCCGCGCCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: LGQLLVRHVGELSEVQEVPFHWH*AAAPAG
Trigger: GCCAGCGGGCGCGGCCGCCAAATGCCAGTGGAAAGG...GACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCTGGCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS TCA 90 bp CCTGGGGCTGCAGCAGCCTGGGACACACAGGCCGACACCCCTTCCTaGCAACTCCAGGAACCATGGGAGCAGCTGGCCACCGGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: PGAAAAWDTQADTPS*QLQEPWEQLATGRS
Trigger: ACTCCTGCCGGTGGCCAGCTGCTCCCATGGTTCCTGGAGTTGTCAGGAAGGGGTGTCGGCCTGTGTGTCCCAGGCTGCTGCAGCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS GCA 90 bp AACGTGTCCAGGACTGTGGCCTGCCGCTCGGGGTCGCCTAGGGGCTaGTTCTCGTGGCTCTGCTCAGCCCTTGTCCTCGTCCAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: NVSRTVACRSGSPRG*FSWLCSALVLVQEG
Trigger: CCCTTCCTGGACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCCCGAGCGGCAGGCCACAGTCCTGGACACGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
ENST00000623401.1
CDS-3UTR CAA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGGGCTCTGCTCAGCCCTaGTCCTCGTCCAGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SGPRNELDVRPLGCACAGGSAQP*SSSRKG
Trigger: CCCCTTCCTGGACGAGGACAAGGGCTGAGCAGAGCC...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCAGGCAGGAACTGGGTTaGCCAGCAGTGCGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPRQELG*PAVRRG
Trigger: GCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCT...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS GCA 90 bp TGGCCATTGTCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTCAGGAGGAATAGGCAGG +
Preference number: 5 (lower is better)
Translates to: WPLSPVPWAGTPSAA*GTSASLTISGGIGR
Trigger: CCTGCCTATTCCTCCTGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAATGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304733.8
CDS GCA 90 bp AAGCCGACCATGCAGGCGTGGAAGTCCCACCAGGGCCCGCGTGGCTaGATTCCAGTGCCGTCCTGGCCTCTGATTTCTAGCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KPTMQAWKSHQGPRG*IPVPSWPLISSSAQ
Trigger: CTGGGCCGAGCTAGAAATCAGAGGCCAGGACGGCACTGGAATGCAGCCACGCGGGCCCTGGTGGGACTTCCACGCCTGCATGGTCGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 90 bp TGGAAGTCCCACCAGGGCCCGCGTGGCTGCATTCCAGTGCCGTCCTaGCCTCTGATTTCTAGCTCGGCCCAGGGTCCCCTGAAGGATCGC +
Preference number: 5 (lower is better)
Translates to: WKSHQGPRGCIPVPS*PLISSSAQGPLKDR
Trigger: GCGATCCTTCAGGGGACCCTGGGCCGAGCTAGAAATCAGAGGCCAGGACGGCACTGGAATGCAGCCACGCGGGCCCTGGTGGGACTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 90 bp CCATGCCTGGGCTCACGGGCTGGGTGGGAAGGGTTGCCGCCAACATaGAGCTGGTGGGAACTGGCCAGGGTCAGGCAATGGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: PCLGSRAGWEGLPPT*SWWELARVRQWPCP
Trigger: AGGACAAGGCCATTGCCTGACCCTGGCCAGTTCCCACCAGCTCCATGTTGGCGGCAACCCTTCCCACCCAGCCCGTGAGCCCAGGCATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS-3UTR CAA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGGCTGGGGACTCGGTGTaGAGGTTCTCGTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: SGPRNELDVRPLGCACAGAGDSV*RFSSSE
Trigger: CTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGCTGGGGACTCGGTGTaGAGGTTCTCGTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: GPLHPKAAVGHSIPQHVPAGDSV*RFSSSE
Trigger: CTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC...AGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTCACAGGCCTGGGTCCCGCTGGGGACTCGGTGTaGAGGTTCTCGTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: EVGAPPGVPGVAVTGLGPAGDSV*RFSSSE
Trigger: CTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC...GGGACCCAGGCCTGTGACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS GCA 90 bp AGCCACAACAGCCATGCCTGGGCTCACGGGCTGGGTGGGAAGGGTTaGCGCCAACATGGAGCTGGTGGGAACTGGCCAGGGTCAGGCAAT +
Preference number: 5 (lower is better)
Translates to: SHNSHAWAHGLGGKG*RQHGAGGNWPGSGN
Trigger: ATTGCCTGACCCTGGCCAGTTCCCACCAGCTCCATGTTGGCGGCAACCCTTCCCACCCAGCCCGTGAGCCCAGGCATGGCTGTTGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS CCA 90 bp CTGTGTCATGGCATGGCCCGTTTCAGGCCTGGGGGTTGGGCGGGCTaGACGGGGCTCTCGCGGAATCTGGTTTCCACCTTTCCACTGGCA +
Preference number: 5 (lower is better)
Translates to: LCHGMARFRPGGWAG*TGLSRNLVSTFPLA
Trigger: TGCCAGTGGAAAGGTGGAAACCAGATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGAAACGGGCCATGCCATGACACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CCA 90 bp AGCCGAGTGCTGTGTCATGGCATGGCCCGTTTCAGGCCTGGGGGTTaGGCGGGCTGGACGGGGCTCTCGCGGAATCTGGTTTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: SRVLCHGMARFRPGG*AGWTGLSRNLVSTF
Trigger: AAAGGTGGAAACCAGATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGAAACGGGCCATGCCATGACACAGCACTCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CCA 90 bp TCTGAGAAGCCGAGTGCTGTGTCATGGCATGGCCCGTTTCAGGCCTaGGGGTTGGGCGGGCTGGACGGGGCTCTCGCGGAATCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SEKPSAVSWHGPFQA*GLGGLDGALAESGF
Trigger: GAAACCAGATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGAAACGGGCCATGCCATGACACAGCACTCGGCTTCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CAA 90 bp CTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGCTCCTGGTCCGACATGTCGGTACAGGCGTGTGGCCATaGTCCCCTGTCCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LVVRVSKDLGQLLVRHVGTGVWP*SPVPWA
Trigger: AGCCCAGGGGACAGGGGACAATGGCCACACGCCTGT...ACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTGACTCGGACGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS GCA 90 bp TGGCCATTGTCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTCTGCATCCAAAGACACA +
Preference number: 5 (lower is better)
Translates to: WPLSPVPWAGTPSAA*GTSASLTISASKDT
Trigger: TGTGTCTTTGGATGCAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGACAATGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CAA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTAGGAAAACGCGGAGGTaGGAGCACCCCCAGGAGTTC +
Preference number: 5 (lower is better)
Translates to: APGQRPTGSHGLQTCPASRKTRR*EHPQEF
Trigger: GAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCT...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp CGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTCCTGTCTGAGAAGCCGAGCTGGGGACTCGGTGTaGAGGTTCTCGTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: RSLRHLSLLNDLSCLRSRAGDSV*RFSSSE
Trigger: CTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC...TCGGCTTCTCAGACAGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS-3UTR CAA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTCTCTGGCTTCTGAGCTaGGCAGCACAGGAAAACGCG +
Preference number: 5 (lower is better)
Translates to: APGQRPTGSHGLQTCPASLWLLS*AAQENA
Trigger: CGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAG...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GCTCCTGGACAGAGACCCACGGGGTCCCATGGGCTCCAAACCTGCCCAGCAAGTAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: APGQRPTGSHGLQTCPASKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...ACTTGCTGGGCAGGTTTGGAGCCCATGGGACCCCGTGGGTCTCTGTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp TTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACGTTCCTGGCAGTGCTCTGCCCCTTGGGTTaGAGCGATTCTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: FTPRPPWATPFLSTFLAVLCPLG*SDSPAS
Trigger: TGAGGCAGGAGAATCGCTCAAACCCAAGGGGCAGAG...CACTGCCAGGAACGTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CAA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGGGCACATCCAGTCCTTaGAAACTCTGGGCAGTGACC +
Preference number: 5 (lower is better)
Translates to: SGPRNELDVRPLGCACAGGTSSP*KLWAVT
Trigger: GGTCACTGCCCAGAGTTTCAAAGGACTGGATGTGCC...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CAA 90 bp GGTCGAAGTGGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTGCCTCCTCTCCGCCCGCTGGCGTCCTCTaGTTCTCTTCCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: GRSGPPERRRCSEAASSPPAGVL*FSSRYL
Trigger: CAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGG...CGGAGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS GCA 90 bp GATCCAGATCACCTTTGGTACGCAAGCACCCATGAAAGCCGACCATaGAGGCGTGGAAGTCCCACCAGGGCCCGCGTGGCTGCATTCCAG +
Preference number: 5 (lower is better)
Translates to: DPDHLWYASTHESRP*RRGSPTRARVAAFQ
Trigger: CTGGAATGCAGCCACGCGGGCCCTGGTGGGACTTCCACGCCTGCATGGTCGGCTTTCATGGGTGCTTGCGTACCAAAGGTGATCTGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 90 bp TGGTCCGACATGTCGGTGAGCTCAGTGAGGTCCAGGAGGTCGAAGTaGACCTCCAGAGAGGAGACGCTGCTCAGAGGCTCTGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: WSDMSVSSVRSRRSK*TSREETLLRGSEGR
Trigger: TCTGCCCTCAGAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTCCACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568662.2
CDS-3UTR CAA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTACAGGCGTGTGGCCATaGTCCCCTGTCCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLTGVWP*SPVPWA
Trigger: AGCCCAGGGGACAGGGGACAATGGCCACACGCCTGT...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CAA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAACAGGCGTGTGGCCATaGTCCCCTGTCCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGTGVWP*SPVPWA
Trigger: AGCCCAGGGGACAGGGGACAATGGCCACACGCCTGT...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CAA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAACAGGCGTGTGGCCATaGTCCCCTGTCCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKTGVWP*SPVPWA
Trigger: AGCCCAGGGGACAGGGGACAATGGCCACACGCCTGT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CAA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAGGCTCTGCTCAGCCCTaGTCCTCGTCCAGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGGSAQP*SSSRKG
Trigger: CCCCTTCCTGGACGAGGACAAGGGCTGAGCAGAGCC...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp TGGGGACTCGGTGTTGAGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGGCCAGTTCTCTTCCAGGTACTaGCGTGTGGGGCGCCGACTG +
Preference number: 5 (lower is better)
Translates to: WGLGVEVLVVRVSKDLGQFSSRY*RVGRRL
Trigger: CAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGAA...CTGGCCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS GCA 90 bp GACGCCCAGCGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTaGATCCAAAGACACAGTGTCACCTTGAGATCCACAGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: DAQRSLRHLSLLNDL*IQRHSVTLRSTGLP
Trigger: TGGGAGCCCTGTGGATCTCAAGGTGACACTGTGTCTTTGGATGCAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 90 bp GCCCTGCTCGGCAGTGTGAGGACACTGGAGCTGCCTTCAGGCCAATaGCAACGCTCCCGTGGGAATCAGAGGAAGTTAAGTGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: ALLGSVRTLELPSGQ*QRSRGNQRKLSELR
Trigger: CCTCAGCTCACTTAACTTCCTCTGATTCCCACGGGAGCGTTGCCATTGGCCTGAAGGCAGCTCCAGTGTCCTCACACTGCCGAGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS-3UTR CAA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGGCTGGGGACTCGGTGTaGAGGTTCTCGTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: RESCWALCDWKPGKETWLAGDSV*RFSSSE
Trigger: CTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGGCTCTGCTCAGCCCTaGTCCTCGTCCAGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GTQGCPYGTERESCWALCGSAQP*SSSRKG
Trigger: CCCCTTCCTGGACGAGGACAAGGGCTGAGCAGAGCC...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp TCGGGGCCCAGGAACGAGCTGGACGTAAGGCCACTGGGCTGTGCTTGTGCTGGGTTCTCCATGTGTGCTTaGCTGGACAGCACATTGTCC +
Preference number: 5 (lower is better)
Translates to: SGPRNELDVRPLGCACAGFSMCA*LDSTLS
Trigger: GGACAATGTGCTGTCCAGCAAAGCACACATGGAGAA...CCCAGCACAAGCACAGCCCAGTGGCCTTACGTCCAGCTCGTTCCTGGGCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GGCCTGGGTCCCCTTCACCCCAAGGCCGCCGTGGGCCACTCCATTCCTCAGCACAACCATGCCTCACAGTaGAGCAAATATTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLGPLHPKAAVGHSIPQHNHASQ*SKYSSR
Trigger: CCTGGAAGAATATTTGCTCAACTGTGAGGCATGGTT...GTGCTGAGGAATGGAGTGGCCCACGGCGGCCTTGGGGTGAAGGGGACCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304733.8
ENST00000392973.8
CDS-3UTR CAA 90 bp GGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGAAGGCAGGAACTGGGTTaGCCAGCAGTGCGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GLKEKAAGLCVTGNQGRRRQELG*PAVRRG
Trigger: GCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCT...TCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACAGGCAGGAACTGGGTTaGCCAGCAGTGCGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: TQGCPYGTERESCWALCDRQELG*PAVRRG
Trigger: GCCCCTCCGCACTGCTGGCAAACCCAGTTCCTGCCT...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS TCA 90 bp ACAAGGAATCTGAGATCCAGATCACCTTTGGTACGCAAGCACCCATaGAAGCCGACCATGCAGGCGTGGAAGTCCCACCAGGGCCCGCGT +
Preference number: 5 (lower is better)
Translates to: TRNLRSRSPLVRKHP*KPTMQAWKSHQGPR
Trigger: ACGCGGGCCCTGGTGGGACTTCCACGCCTGCATGGTCGGCTTTCATGGGTGCTTGCGTACCAAAGGTGATCTGGATCTCAGATTCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS TCA 90 bp CTTGGCACATCCAGTCCTTTGAAACTCTGGGCAGTGACCAGCAGGTaGTGGGATGGCTGGGCTTGTGGCCTCATGCCTGGACCCAGACAA +
Preference number: 5 (lower is better)
Translates to: LGTSSPLKLWAVTSR*WDGWACGLMPGPRQ
Trigger: TTGTCTGGGTCCAGGCATGAGGCCACAAGCCCAGCCATCCCATCACCTGCTGGTCACTGCCCAGAGTTTCAAAGGACTGGATGTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS GCA 90 bp CTCGGCTCACTGCAACCTCTGCCCCTTGGGTTTGAGCGATTCTCCTaGCTCATCCCCCTGAGTAGATGGGATTACAGGCATGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: LGSLQPLPLGFERFS*LIPLSRWDYRHAPA
Trigger: TGCTGGTGCATGCCTGTAATCCCATCTACTCAGGGGGATGAGGCAGGAGAATCGCTCAAACCCAAGGGGCAGAGGTTGCAGTGAGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CAA 90 bp GGGACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTAGGAAAACGCGGAGGTaGGAGCACCCCCAGGAGTTC +
Preference number: 5 (lower is better)
Translates to: GTQGCPYGTERESCWALCRKTRR*EHPQEF
Trigger: GAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCT...ACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAACCCGCTGGCGTCCTCTaGTTCTCTTCCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKPAGVL*FSSRYL
Trigger: CAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGG...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS CCA 90 bp CCTCTGATTTCTAGCTCGGCCCAGGGTCCCCTGAAGGATCGCCCATaGATTTCCATGTCCAGCCTCTTGGTCCCCTTCAAACCAGAACAG +
Preference number: 5 (lower is better)
Translates to: PLISSSAQGPLKDRP*ISMSSLLVPFKPEQ
Trigger: CTGTTCTGGTTTGAAGGGGACCAAGAGGCTGGACATGGAAATCCATGGGCGATCCTTCAGGGGACCCTGGGCCGAGCTAGAAATCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CAA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAACAGGCGTGTGGCCATaGTCCCCTGTCCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLTGVWP*SPVPWA
Trigger: AGCCCAGGGGACAGGGGACAATGGCCACACGCCTGT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568838.2
CDS-3UTR CAA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGGCTGGGGACTCGGTGTaGAGGTTCTCGTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: DALIPLFANELCGSSAGRAGDSV*RFSSSE
Trigger: CTCGGACGACGAGAACCTCAACACCGAGTCCCCAGC...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp AGCACAGGAAAACGCGGAGGTTGGAGCACCCCCAGGAGTTCCTGGAGTGGCTGTTTCTCCATGTGTGCTTaGCTGGACAGCACATTGTCC +
Preference number: 5 (lower is better)
Translates to: STGKRGGWSTPRSSWSGCFSMCA*LDSTLS
Trigger: GGACAATGTGCTGTCCAGCAAAGCACACATGGAGAA...ACAGCCACTCCAGGAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACGACCCAGACAAGGGGTaGAGGGGCTTCAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TQGCPYGTERESCWALCDDPDKG*RGFKEA
Trigger: AGCCTCCTTGAAGCCCCTCAACCCCTTGTCTGGGTC...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CAA 90 bp CTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCTCTGGCTTCTCTGGCTTCTGAGCTaGGCAGCACAGGAAAACGCG +
Preference number: 5 (lower is better)
Translates to: LCWTAHCPISHYQTRLWLLWLLS*AAQENA
Trigger: CGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAG...AAGCCAGAGGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp CATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAGCCACTACCAAACCCGCCCTCTGGCTTCTGAGCTaGGCAGCACAGGAAAACGCG +
Preference number: 5 (lower is better)
Translates to: HVCFAGQHIVPLATTKPALWLLS*AAQENA
Trigger: CGCGTTTTCCTGTGCTGCCAAGCTCAGAAGCCAGAG...GGCGGGTTTGGTAGTGGCTAATGGGACAATGTGCTGTCCAGCAAAGCACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGAATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGIKVGI*GPLLHV
Trigger: CACATGGAGAAGCGGCCCCAAAATTCCCACCTTGAT...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp AGTTTAAGGGCCGTGGGCAGGCCTTGTAGCCGGGCAATGGGATGTGAGCAGAAAATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: SLRAVGRPCSRAMGCEQKIKVGI*GPLLHV
Trigger: CACATGGAGAAGCGGCCCCAAAATTCCCACCTTGAT...TTTCTGCTCACATCCCATTGCCCGGCTACAAGGCCTGCCCACGGCCCTTAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp AGGAGAGGTGAACCCCACCCCGAGAGCATTCCGGGAGGTGTCATCAAGTCTCTTATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: RRGEPHPESIPGGVIKSLIKVGI*GPLLHV
Trigger: CACATGGAGAAGCGGCCCCAAAATTCCCACCTTGAT...AAGAGACTTGATGACACCTCCCGGAATGCTCTCGGGGTGGGGTTCACCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp AGAGAAAGCTGCTGGGCTCTGTGTGACTGGAAACCAGGGAAGGAGACCTGGCTGATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: RESCWALCDWKPGKETWLIKVGI*GPLLHV
Trigger: CACATGGAGAAGCGGCCCCAAAATTCCCACCTTGAT...CAGCCAGGTCTCCTTCCCTGGTTTCCAGTCACACAGAGCCCAGCAGCTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GGAGGTGTCATCAAGTCTCTTAGGCAGTCTGGTGATATTTGGTGTTCTGAGCTAGGCTCTGCTCAGCCCTaGTCCTCGTCCAGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GGVIKSLRQSGDIWCSELGSAQP*SSSRKG
Trigger: CCCCTTCCTGGACGAGGACAAGGGCTGAGCAGAGCC...TAGCTCAGAACACCAAATATCACCAGACTGCCTAAGAGACTTGATGACACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAAGGAAAACGCGGAGGTaGGAGCACCCCCAGGAGTTC +
Preference number: 5 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLRKTRR*EHPQEF
Trigger: GAACTCCTGGGGGTGCTCCAACCTCCGCGTTTTCCT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp CGGGCAATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGATTCTCCATGTGTGCTTaGCTGGACAGCACATTGTCC +
Preference number: 5 (lower is better)
Translates to: RAMGCEQKRECGLAVGAGFSMCA*LDSTLS
Trigger: GGACAATGTGCTGTCCAGCAAAGCACACATGGAGAA...TCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCATTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: GNQGGNFGAASPCVLCWTKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...TGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp TGCTGTCAGGCAAGAAGCCCATTCTGTGAGCTTCAGCATATAAGCATTGGGAGGTTCTCTTCCAGGTACTaGCGTGTGGGGCGCCGACTG +
Preference number: 5 (lower is better)
Translates to: CCQARSPFCELQHISIGRFSSRY*RVGRRL
Trigger: CAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGAA...CCTCCCAATGCTTATATGCTGAAGCTCACAGAATGGGCTTCTTGCCTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS-3UTR CAA 90 bp ATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGACAGCACATTGTCCCATTAAAGGAGGGAATGGACTaGTCTGTCACGCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ILGPLLHVCFAGQHIVPLKEGMD*SVTQGP
Trigger: TGGCCCCTGCGTGACAGACAAGTCCATTCCCTCCTT...TAATGGGACAATGTGCTGTCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp ATGGGATGTGAGCAGAAACGAGAATGTGGCCTAGCAGTGGGTGCAGGACAAGGATTCTCCATGTGTGCTTaGCTGGACAGCACATTGTCC +
Preference number: 5 (lower is better)
Translates to: MGCEQKRECGLAVGAGQGFSMCA*LDSTLS
Trigger: GGACAATGTGCTGTCCAGCAAAGCACACATGGAGAA...TCCTTGTCCTGCACCCACTGCTAGGCCACATTCTCGTTTCTGCTCACATCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp GATGCTTTAATCCCCCTGTTTGCAAACGAGCTCTGTGGAAGCTCAGCAGGAAGGATCAAGGTGGGAATTTaGGGGCCGCTTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: DALIPLFANELCGSSAGRIKVGI*GPLLHV
Trigger: CACATGGAGAAGCGGCCCCAAAATTCCCACCTTGAT...CCTTCCTGCTGAGCTTCCACAGAGCTCGTTTGCAAACAGGGGGATTAAAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS TCA 90 bp GCCTCCTTAACGATCTCAGGAGGAATAGGCAGGCCTGCCATTCTGTaGTCCCTTAGCCACCAACCATGCCTCACAGTTGAGCAAATATTC +
Preference number: 5 (lower is better)
Translates to: ASLTISGGIGRPAIL*SLSHQPCLTVEQIF
Trigger: GAATATTTGCTCAACTGTGAGGCATGGTTGGTGGCTAAGGGATCACAGAATGGCAGGCCTGCCTATTCCTCCTGAGATCGTTAAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304733.8
CDS-3UTR CAA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGATCCATGTCCAGCCTCTaGGTCCCCTTCAAACCAGAA +
Preference number: 5 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGSMSSL*VPFKPE
Trigger: TTCTGGTTTGAAGGGGACCAAGAGGCTGGACATGGA...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS-3UTR CAA 90 bp ATGGAAATCAAGGTGGGAATTTTGGGGCCGCTTCTCCATGTGTGCTTTGCTGGATTCTCCATGTGTGCTTaGCTGGACAGCACATTGTCC +
Preference number: 5 (lower is better)
Translates to: MEIKVGILGPLLHVCFAGFSMCA*LDSTLS
Trigger: GGACAATGTGCTGTCCAGCAAAGCACACATGGAGAA...TCCAGCAAAGCACACATGGAGAAGCGGCCCCAAAATTCCCACCTTGATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS-3UTR CAA 90 bp ACACAAGGCTGCCCTTATGGGACTGAAAGAGAAAGCTGCTGGGCTCTGTGTGACAACCATGCCTCACAGTaGAGCAAATATTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TQGCPYGTERESCWALCDNHASQ*SKYSSR
Trigger: CCTGGAAGAATATTTGCTCAACTGTGAGGCATGGTT...GTCACACAGAGCCCAGCAGCTTTCTCTTTCAGTCCCATAAGGGCAGCCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304733.8
ENST00000392973.8
CDS GCA 72 bp TCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTCTCCGGTG +
Preference number: 6 (lower is better)
Translates to: SPVPWAGTPSAA*GTSASLTISPV
Trigger: CACCGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002501.11
CDS GCA 72 bp CGCCCGCTGGCGTCCTCTTGTTCTCTTCCAGGTACTTaGGTGTGGGGCGCCGACTGTGTGCGGGCGCCCCTC +
Preference number: 6 (lower is better)
Translates to: RPLASSCSLPGT*VWGADCVRAPL
Trigger: GAGGGGCGCCCGCACACAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568330.2
ENST00000568838.2
CDS GCA 72 bp TCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTTTGGCGGC +
Preference number: 6 (lower is better)
Translates to: SPVPWAGTPSAA*GTSASLTIFGG
Trigger: GCCGCCAAAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS CCA 72 bp GCCTGCCGCTCGGGGTCGCCTAGGGGCTGCTTCTCGTaGCTCTGCTCAGCCCTTGTCCTCGTCCAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: ACRSGSPRGCFS*LCSALVLVQEG
Trigger: CCCTTCCTGGACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCCCGAGCGGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
ENST00000623401.1
CDS CCA 72 bp CCGAGTGCTGTGTCATGGCATGGCCCGTTTCAGGCCTaGGGGTTGGGCGGGCTGGACGGGGCTCTCGCGGAA +
Preference number: 6 (lower is better)
Translates to: PSAVSWHGPFQA*GLGGLDGALAE
Trigger: TTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGAAACGGGCCATGCCATGACACAGCACTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CAA 72 bp GCGCCCGCTGGCGTCCTCTTGTTCTCTTCCAGGTACTaGCGTGTGGGGCGCCGACTGTGTGCGGGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: APAGVLLFSSRY*RVGRRLCAGAP
Trigger: AGGGGCGCCCGCACACAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568330.2
ENST00000568838.2
CDS GCA 72 bp AGGACTGTGGCCTGCCGCTCGGGGTCGCCTAGGGGCTaGTTCTCGTGGCTCTGCTCAGCCCTTGTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: RTVACRSGSPRG*FSWLCSALVLV
Trigger: GACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCCCGAGCGGCAGGCCACAGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
ENST00000623401.1
CDS GCA 72 bp TCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: SPVPWAGTPSAA*GTSASLTISGG
Trigger: TCCTCCTGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304733.8
CDS GCA 72 bp TCCCCTGTCCCCTGGGCTGGGACGCCCAGCGCAGCCTaGGGCACCTCAGCCTCCTTAACGATCTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: SPVPWAGTPSAA*GTSASLTISAS
Trigger: GGATGCAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGGGCGTCCCAGCCCAGGGGACAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 72 bp CACCAGGGCCCGCGTGGCTGCATTCCAGTGCCGTCCTaGCCTCTGATTTCTAGCTCGGCCCAGGGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: HQGPRGCIPVPS*PLISSSAQGPL
Trigger: CAGGGGACCCTGGGCCGAGCTAGAAATCAGAGGCCAGGACGGCACTGGAATGCAGCCACGCGGGCCCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 72 bp CTGGCGTCCTCTTGTTCTCTTCCAGGTACTTGCGTGTaGGGCGCCGACTGTGTGCGGGCGCCCCTCGGGGCT +
Preference number: 6 (lower is better)
Translates to: LASSCSLPGTCV*GADCVRAPLGA
Trigger: AGCCCCGAGGGGCGCCCGCACACAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568330.2
ENST00000568838.2
CDS CCA 72 bp GGGGTTGGGCGGGCTGGACGGGGCTCTCGCGGAATCTaGTTTCCACCTTTCCACTGGCATTTGGCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: GVGRAGRGSRGI*FPPFHWHLAAA
Trigger: CGCGGCCGCCAAATGCCAGTGGAAAGGTGGAAACCAGATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CCA 72 bp GGCATGGCCCGTTTCAGGCCTGGGGGTTGGGCGGGCTaGACGGGGCTCTCGCGGAATCTGGTTTCCACCTTT +
Preference number: 6 (lower is better)
Translates to: GMARFRPGGWAG*TGLSRNLVSTF
Trigger: AAAGGTGGAAACCAGATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGAAACGGGCCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CCA 72 bp CTGTGTCATGGCATGGCCCGTTTCAGGCCTGGGGGTTaGGCGGGCTGGACGGGGCTCTCGCGGAATCTGGTT +
Preference number: 6 (lower is better)
Translates to: LCHGMARFRPGG*AGWTGLSRNLV
Trigger: AACCAGATTCCGCGAGAGCCCCGTCCAGCCCGCCCAACCCCCAGGCCTGAAACGGGCCATGCCATGACACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CAA 72 bp CACTGGCATTTGGCGGCCGCGCCCGCTGGCGTCCTCTaGTTCTCTTCCAGGTACTTGCGTGTGGGGCGCCGA +
Preference number: 6 (lower is better)
Translates to: HWHLAAAPAGVL*FSSRYLRVGRR
Trigger: TCGGCGCCCCACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGGCGCGGCCGCCAAATGCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CAA 90 bp CCACCTTTCCACTGGCATTTGGCGGCCGCGCCCGCTGGCGTCCTCTaGTTCTCTTCCAGGTACTTGCGTGTGGGGCGCCGACTGTGTGCG +
Preference number: 6 (lower is better)
Translates to: PPFHWHLAAAPAGVL*FSSRYLRVGRRLCA
Trigger: CGCACACAGTCGGCGCCCCACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGGCGCGGCCGCCAAATGCCAGTGGAAAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS TCA 72 bp GGGGCAGCGGGTGCAGACCTGCTGGGGACTCGGTGTTaGGGTTCTCGTCGTCCGAGTCAGCAAAGACCTCGG +
Preference number: 6 (lower is better)
Translates to: GAAGADLLGTRC*GSRRPSQQRPR
Trigger: CCGAGGTCTTTGCTGACTCGGACGACGAGAACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCGCTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
CDS TCA 72 bp GCAGCAGCCTGGGACACACAGGCCGACACCCCTTCCTaGCAACTCCAGGAACCATGGGAGCAGCTGGCCACC +
Preference number: 6 (lower is better)
Translates to: AAAWDTQADTPS*QLQEPWEQLAT
Trigger: GGTGGCCAGCTGCTCCCATGGTTCCTGGAGTTGTCAGGAAGGGGTGTCGGCCTGTGTGTCCCAGGCTGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS GCA 72 bp CTCTCCACAGTGAGAAACGTGTCCAGGACTGTGGCCTaGCGCTCGGGGTCGCCTAGGGGCTGCTTCTCGTGG +
Preference number: 6 (lower is better)
Translates to: LSTVRNVSRTVA*RSGSPRGCFSW
Trigger: CCACGAGAAGCAGCCCCTAGGCGACCCCGAGCGGCAGGCCACAGTCCTGGACACGTTTCTCACTGTGGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000002501.11
ENST00000304733.8
ENST00000392973.8
ENST00000568662.2
ENST00000568838.2
ENST00000623401.1
CDS CCA 72 bp GACCATGCAGGCGTGGAAGTCCCACCAGGGCCCGCGTaGCTGCATTCCAGTGCCGTCCTGGCCTCTGATTTC +
Preference number: 6 (lower is better)
Translates to: DHAGVEVPPGPA*LHSSAVLASDF
Trigger: GAAATCAGAGGCCAGGACGGCACTGGAATGCAGCCACGCGGGCCCTGGTGGGACTTCCACGCCTGCATGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 72 bp CAGCCACAACAGCCATGCCTGGGCTCACGGGCTGGGTaGGAAGGGTTGCCGCCAACATGGAGCTGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: QPQQPCLGSRAG*EGLPPTWSWWE
Trigger: TTCCCACCAGCTCCATGTTGGCGGCAACCCTTCCCACCCAGCCCGTGAGCCCAGGCATGGCTGTTGTGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS GCA 72 bp CACCTTTGGTACGCAAGCACCCATGAAAGCCGACCATaGAGGCGTGGAAGTCCCACCAGGGCCCGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: HLWYASTHESRP*RRGSPTRARVA
Trigger: AGCCACGCGGGCCCTGGTGGGACTTCCACGCCTGCATGGTCGGCTTTCATGGGTGCTTGCGTACCAAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 72 bp CCCCTTCCTGACAACTCCAGGAACCATGGGAGCAGCTaGCCACCGGCAGGAGTCACAGTGGGGCTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: PLPDNSRNHGSS*PPAGVTVGLVL
Trigger: AAGGACCAGCCCCACTGTGACTCCTGCCGGTGGCCAGCTGCTCCCATGGTTCCTGGAGTTGTCAGGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS GCA 72 bp CCAGCAGGTGATGGGATGGCTGGGCTTGTGGCCTCATaGCTGGACCCAGACAAGGGGTTGAGGGGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: PAGDGMAGLVAS*LDPDKGLRGFK
Trigger: CTTGAAGCCCCTCAACCCCTTGTCTGGGTCCAGGCATGAGGCCACAAGCCCAGCCATCCCATCACCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 72 bp TCCACCTTTCCACTGGCATTTGGCGGCCGCGCCCGCTaGCGTCCTCTTGTTCTCTTCCAGGTACTTGCGTGT +
Preference number: 6 (lower is better)
Translates to: STFPLAFGGRAR*RPLVLFQVLAC
Trigger: ACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGGCGCGGCCGCCAAATGCCAGTGGAAAGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568330.2
CDS CCA 72 bp TCAGCCTCCTTAACGATCTTTGGCGGCCGCGCCCGCTaGCGTCCTCTTGTTCTCTTCCAGGTACTTGCGTGT +
Preference number: 6 (lower is better)
Translates to: SASLTIFGGRAR*RPLVLFQVLAC
Trigger: ACACGCAAGTACCTGGAAGAGAACAAGAGGACGCCAGCGGGCGCGGCCGCCAAAGATCGTTAAGGAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568838.2
CDS TCA 72 bp TCCAGTCCTTTGAAACTCTGGGCAGTGACCAGCAGGTaGTGGGATGGCTGGGCTTGTGGCCTCATGCCTGGA +
Preference number: 6 (lower is better)
Translates to: SSPLKLWAVTSR*WDGWACGLMPG
Trigger: TCCAGGCATGAGGCCACAAGCCCAGCCATCCCATCACCTGCTGGTCACTGCCCAGAGTTTCAAAGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CCA 72 bp TCTAGCTCGGCCCAGGGTCCCCTGAAGGATCGCCCATaGATTTCCATGTCCAGCCTCTTGGTCCCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SSSAQGPLKDRP*ISMSSLLVPFK
Trigger: TTTGAAGGGGACCAAGAGGCTGGACATGGAAATCCATGGGCGATCCTTCAGGGGACCCTGGGCCGAGCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS TCA 72 bp CTGAGATCCAGATCACCTTTGGTACGCAAGCACCCATaGAAGCCGACCATGCAGGCGTGGAAGTCCCACCAG +
Preference number: 6 (lower is better)
Translates to: LRSRSPLVRKHP*KPTMQAWKSHQ
Trigger: CTGGTGGGACTTCCACGCCTGCATGGTCGGCTTTCATGGGTGCTTGCGTACCAAAGGTGATCTGGATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS TCA 72 bp CCTTGGGCCCTGGCCTCCCCTAGTGAACAAGGAATCTaGGATCCAGATCACCTTTGGTACGCAAGCACCCAT +
Preference number: 6 (lower is better)
Translates to: PWALASPSEQGI*DPDHLWYASTH
Trigger: ATGGGTGCTTGCGTACCAAAGGTGATCTGGATCTCAGATTCCTTGTTCACTAGGGGAGGCCAGGGCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS GCA 72 bp CTGCAACCTCTGCCCCTTGGGTTTGAGCGATTCTCCTaGCTCATCCCCCTGAGTAGATGGGATTACAGGCAT +
Preference number: 6 (lower is better)
Translates to: LQPLPLGFERFS*LIPLSRWDYRH
Trigger: ATGCCTGTAATCCCATCTACTCAGGGGGATGAGGCAGGAGAATCGCTCAAACCCAAGGGGCAGAGGTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS GCA 72 bp CGCAGCCTGCGGCACCTCAGCCTCCTTAACGATCTCTaGATCCAAAGACACAGTGTCACCTTGAGATCCACA +
Preference number: 6 (lower is better)
Translates to: RSLRHLSLLNDL*IQRHSVTLRST
Trigger: TGTGGATCTCAAGGTGACACTGTGTCTTTGGATGCAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS CAA 72 bp CTGAAGGATCGCCCATGGATTTCCATGTCCAGCCTCTaGGTCCCCTTCAAACCAGAACAGCCCCTCTCCACT +
Preference number: 6 (lower is better)
Translates to: LKDRPWISMSSL*VPFKPEQPLST
Trigger: AGTGGAGAGGGGCTGTTCTGGTTTGAAGGGGACCAAGAGGCTGGACATGGAAATCCATGGGCGATCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392973.8
CDS TCA 72 bp ACGATCTCAGGAGGAATAGGCAGGCCTGCCATTCTGTaGTCCCTTAGCCACCAACCATGCCTCACAGTTGAG +
Preference number: 6 (lower is better)
Translates to: TISGGIGRPAIL*SLSHQPCLTVE
Trigger: CTCAACTGTGAGGCATGGTTGGTGGCTAAGGGATCACAGAATGGCAGGCCTGCCTATTCCTCCTGAGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304733.8
CDS CCA 72 bp ACTGAAGTTCACACAGGTCACGTCAGTGTCCTTCACTaGTCACTGTCAGAGACTGAGGACGCGCTGTCGCAT +
Preference number: 6 (lower is better)
Translates to: TEVHTGHVSVLH*SLSETEDALSH
Trigger: ATGCGACAGCGCGTCCTCAGTCTCTGACAGTGACCAGTGAAGGACACTGACGTGACCTGTGTGAACTTCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623401.1
CDS CAA 72 bp TTCTGTGATCCCTTAGCCACCAACCATGCCTCACAGTaGAGCAAATATTCTTCCAGGTTTCTCCCATGTTTA +
Preference number: 6 (lower is better)
Translates to: FCDPLATNHASQ*SKYSSRFLPCL
Trigger: TAAACATGGGAGAAACCTGGAAGAATATTTGCTCAACTGTGAGGCATGGTTGGTGGCTAAGGGATCACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304733.8
ENST00000392973.8