RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DBN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113758

Ensembl transcript IDs: ENST00000292385.9, ENST00000309007.9, ENST00000393565.5, ENST00000467054.2, ENST00000471767.1, ENST00000472831.5, ENST00000477391.6, ENST00000505550.1, ENST00000506117.5, ENST00000512501.1, ENST00000514833.1

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATaGAGGCACGGCGGGCCGTCTGGCCAGAGGCTGATGCAGGTGGGC +
Preference number: 1 (lower is better)
Translates to: PGPESGVGARRSCCE*RHGGPSGQRLMQVG
Trigger: GCCCACCTGCATCAGCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR GCA 90 bp AGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTaGCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGG +
Preference number: 1 (lower is better)
Translates to: REAAKSPARAGIRSG*QAELLRMQARRAVW
Trigger: CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR GCA 90 bp AGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTaGTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCTGATG +
Preference number: 1 (lower is better)
Translates to: SPQPGPESGVGARRS*CECRHGGPSGQRLM
Trigger: CATCAGCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR CCA 90 bp GCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTACCTaGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTGGCACAGAG +
Preference number: 1 (lower is better)
Translates to: APAPKFLPIIQPSTT*RLVVEHRRRSLGTE
Trigger: CTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR CCA 90 bp CTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTaGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGC +
Preference number: 1 (lower is better)
Translates to: LAPPLITTLEALLLF*NWVCIPACDVDLCG
Trigger: GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR CCA 90 bp CCTCCAACCCGGCCAGCTGAGCAGGGAGGACTAAGAGCTACAATCTaGACCAGGGAAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTA +
Preference number: 1 (lower is better)
Translates to: PPTRPAEQGGLRATI*TREGGVEFATASQL
Trigger: TAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTTCCCTGGTCCAGATTGTAGCTCTTAGTCCTCCCTGCTCAGCTGGCCGGGTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR TCA 90 bp TTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTGGCCTGCAGGGGAAAGCATCAGGTC +
Preference number: 1 (lower is better)
Translates to: LAQSSSDWANSSSCD*LKYPSLACRGKHQV
Trigger: GACCTGATGCTTTCCCCTGCAGGCCAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR TCA 90 bp CACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGATTGACTaGAGTACCCCTCACTGGCCTGCAGGGGAAAGCATCAGGTCACTT +
Preference number: 1 (lower is better)
Translates to: HRALPIGQTPPPVID*STPHWPAGESIRSL
Trigger: AAGTGACCTGATGCTTTCCCCTGCAGGCCAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR GCA 90 bp CTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAACTGGGTCTaGATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGA +
Preference number: 1 (lower is better)
Translates to: LITTLEALLLFWNWV*IPACDVDLCGVRKG
Trigger: TCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR CCA 90 bp CAGTACTACCTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTaGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGATT +
Preference number: 1 (lower is better)
Translates to: QYYLEACCRTQEAEP*HRALPIGQTPPPVI
Trigger: AATCACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR TCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATCGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR TCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTCGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: GPVGREAAKSPARAGIRSRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR GCA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCCGGAGCTGCTGCGAATaGAGGCACGGCGGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: WVGKRPSPQPGPESGVGARSCCE*RHGGPS
Trigger: AGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCG...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCACGGCGGGCCGTCTaGCCAGAGGCTGATGCAGGT +
Preference number: 2 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANARRAV*PEADAG
Trigger: ACCTGCATCAGCCTCTGGCCAGACGGCCCGCCGTGC...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR TCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTCGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR TCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGCGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: LGLAPPLITTLEALLLFWRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR CCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAGCCTCTGTGAGCGGTaGGTAGTGGTGGGGTGGCTA +
Preference number: 2 (lower is better)
Translates to: LGLAPPLITTLEALLLFWSLCER*VVVGWL
Trigger: TAGCCACCCCACCACTACCCACCGCTCACAGAGGCT...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR TCA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCCAGCAGGACTGGGGCTaGCCTATCAGGCCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGQQDWG*PIRPEP
Trigger: GGGCTCAGGCCTGATAGGTCAGCCCCAGTCCTGCTG...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR GCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGGCCAGGCGGAGCTGCTaGGAATGCAGGCACGGCGGG +
Preference number: 2 (lower is better)
Translates to: KEGWNLQQRLNYQREESQARRSC*ECRHGG
Trigger: CCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGC...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR TCA 90 bp TGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGCTGACCTATCAGGCCTaGGCCCGTTTCCCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: WVCIPACDVDLCGVRKGELTYQA*ARFPSN
Trigger: GTTGCTGGGGAAACGGGCTCAGGCCTGATAGGTCAG...CTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR GCA 90 bp TACTACCTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTGGCACAGAGCTTACCCCTCACTGGCCTaGAGGGGAAAGCATCAGGTC +
Preference number: 2 (lower is better)
Translates to: YYLEACCRTQEAEPWHRAYPSLA*RGKHQV
Trigger: GACCTGATGCTTTCCCCTGCAGGCCAGTGAGGGGTA...AGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR TCA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGAGGCCCCAAGCAGGGTaGGGCCTCCAACCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKRPQAG*GLQPGQ
Trigger: CTGGCCGGGTTGGAGGCCTCACCCTGCTTGGGGCCT...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309007.9
3UTR-3UTR GCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGGTGCCAGGCGGAGCTaGTGCGAATGCAGGCACGGC +
Preference number: 2 (lower is better)
Translates to: NLQQRLNYQREESQSTVQGARRS*CECRHG
Trigger: GCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACC...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR CCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTACAGGAGGCGGAGCCTTaGCACAGAGCTCTTCCGATT +
Preference number: 2 (lower is better)
Translates to: SSGTGSASQHVMSISVALQEAEP*HRALPI
Trigger: AATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTG...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR GCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCGGAGCTGCTGCGAATaGAGGCACGGCGGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFRSCCE*RHGGPS
Trigger: AGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCG...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR CCA 90 bp AAAACAGTTACTAAACGTGAAAAAGGAACCCAAGCAAAGAGGAAGGAGTTGGGGGGCCGGAATCCGGAGTaGGTGCCAGGCGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: KTVTKREKGTQAKRKELGGRNPE*VPGGAA
Trigger: AGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCC...CCCCAACTCCTTCCTCTTTGCTTGGGTTCCTTTTTCACGTTTAGTAACTGTTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000309007.9
3UTR-3UTR CCA 90 bp TCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGCAGAGCTCTTCCGATTaGGCAAACTCCTCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: SSSSGTGSASQHVMSISVQSSSD*ANSSSC
Trigger: ACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTG...CACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR TCA 90 bp ATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGGAGTTAGGGTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTG +
Preference number: 2 (lower is better)
Translates to: IPACDVDLCGVRKGEELGSSSCD*LKYPSL
Trigger: CAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGA...CCCTAACTCCTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR GCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGGTGCCAGGCGGAGCTaGTGCGAATGCAGGCACGGC +
Preference number: 2 (lower is better)
Translates to: NYQREESQSTVQVSYQLFGARRS*CECRHG
Trigger: GCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR TCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAAAACTCCTCCTCCTGTaGTTGACTGAAGTACCCCTC +
Preference number: 2 (lower is better)
Translates to: SSGTGSASQHVMSISVALKLLLL*LTEVPL
Trigger: GAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTT...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR GCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGGAATCCGGAGTGGGTaGCAGGCGGAGCTGCTGCGA +
Preference number: 2 (lower is better)
Translates to: NYQREESQSTVQVSYQLFGIRSG*QAELLR
Trigger: TCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR CCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGACCAGGGAAGGAGGGGTaGAATTTGCAACAGCGTCTC +
Preference number: 2 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGPGKEG*NLQQRL
Trigger: GAGACGCTGTTGCAAATTCCACCCCTCCTTCCCTGG...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR GCA 72 bp CCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTaGTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: PGPESGVGARRS*CECRHGGPSGQ
Trigger: CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR GCA 72 bp GCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTaGCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGG +
Preference number: 3 (lower is better)
Translates to: AKSPARAGIRSG*QAELLRMQARR
Trigger: CCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR CCA 72 bp AGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTaGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACG +
Preference number: 3 (lower is better)
Translates to: SGQVPSQGRNPE*VPGGAAANAGT
Trigger: CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR GCA 72 bp GAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATaGAGGCACGGCGGGCCGTCTGGCCAGAGGCTGATG +
Preference number: 3 (lower is better)
Translates to: ESGVGARRSCCE*RHGGPSGQRLM
Trigger: CATCAGCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
3UTR-3UTR CAA 90 bp GGGTGGCTACCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATAAAGCATCAGGTCACTaGGCCCCACCCAGCAGGACT +
Preference number: 3 (lower is better)
Translates to: GWLPTLKSSPRTQIPPHHKASGH*APPSRT
Trigger: AGTCCTGCTGGGTGGGGCCAAGTGACCTGATGCTTT...ATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGGTAGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR CAA 90 bp TGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGACAGGAGGCGGAGCCTaGGCACAGAGCTCTTCCGAT +
Preference number: 3 (lower is better)
Translates to: WVCIPACDVDLCGVRKGETGGGA*AQSSSD
Trigger: ATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGT...CTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR CCA 72 bp CTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTaGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCT +
Preference number: 3 (lower is better)
Translates to: LEACCRTQEAEP*HRALPIGQTPP
Trigger: AGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR CAA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCACAGAGCTCTTCCGATaGGGCAAACTCCTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGTELFR*GKLLLL
Trigger: CAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGT...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR TCA 72 bp CTTCCGATTGGGCAAACTCCTCCTCCTGTGATTGACTaGAGTACCCCTCACTGGCCTGCAGGGGAAAGCATC +
Preference number: 3 (lower is better)
Translates to: LPIGQTPPPVID*STPHWPAGESI
Trigger: GATGCTTTCCCCTGCAGGCCAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTTGCCCAATCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR TCA 72 bp AGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTGGCCTGCAGGGGAAAG +
Preference number: 3 (lower is better)
Translates to: SSSDWANSSSCD*LKYPSLACRGK
Trigger: CTTTCCCCTGCAGGCCAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR CCA 72 bp CCCAAATTCCTCCCCATCATCCAGCCCAGTACTACCTaGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTT +
Preference number: 3 (lower is better)
Translates to: PKFLPIIQPSTT*RLVVEHRRRSL
Trigger: AAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTACTGGGCTGGATGATGGGGAGGAATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
3UTR-3UTR CAA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGAAGGAGGGGTGGAATTaGCAACAGCGTCTCAACTAC +
Preference number: 3 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKKEGWN*QQRLNY
Trigger: GTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCAGTCCTCTGCAGGGCTaGCTGGCCCCCGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCSPLQG*LAPGEA
Trigger: CGCCTCCCCGGGGGCCAGGCAGCCCTGCAGAGGACT...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGTCCTCTGCAGGGCTaGCTGGCCCCCGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQSPLQG*LAPGEA
Trigger: CGCCTCCCCGGGGGCCAGGCAGCCCTGCAGAGGACT...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGAGGCCCCAAGCAGGGTaGGGCCTCCAACCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELRPQAG*GLQPGQ
Trigger: CTGGCCGGGTTGGAGGCCTCACCCTGCTTGGGGCCT...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGGCCAGGCGGAGCTGCTaGGAATGCAGGCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQARRSC*ECRHGG
Trigger: CCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGC...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGGCGTGGGGATGGGAGTaGGCGCCATCCTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQAWGWE*APSSGG
Trigger: GCCACCGGAGGATGGCGCCCACTCCCATCCCCACGC...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGCGTGGGGATGGGAGTaGGCGCCATCCTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCAWGWE*APSSGG
Trigger: GCCACCGGAGGATGGCGCCCACTCCCATCCCCACGC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGTACCCGAGGGTGGCGTaGGGGCCCTGGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQYPRVA*GPWAHP
Trigger: AGGGTGAGCCCAGGGCCCCCACGCCACCCTCGGGTA...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTCAGTACCCGAGGGTaGCGTGGGGGCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELLSTRG*RGGPGL
Trigger: GAGCCCAGGGCCCCCACGCCACCCTCGGGTACTGAG...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCCCGCCTCGGAGCCTCTaGAGCGTCGCGAGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: WVGKRPSPQPGPESGVGAPPRSL*SVASRA
Trigger: CGCTCGGCTCGCGACGCTGCAGAGGCTCCGAGGCGG...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGGGCACAGCCTTCGCCTaGTGGCAGCAGTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWGTAFA*WQQWLR
Trigger: CCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCC...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGGGTGCCAGGCGGAGCTaGTGCGAATGCAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELGARRS*CECRHG
Trigger: GCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACC...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTTGGGCACCTTCCCCCTaGCTCCTCCGCGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSWAPSP*LLRDPR
Trigger: CCGCGGGTCGCGGAGGAGGCAGGGGGAAGGTGCCCA...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR GCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGAGTCCCCACCTGGCTaGCCTCCCAGTGTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGESPPG*PPSVRV
Trigger: CACCCGCACACTGGGAGGGCAGCCAGGTGGGGACTC...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGGGTGCAGCACAGGGCTaGAGAGTCGCGCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELGAAQG*RVAPAR
Trigger: ACGGGCTGGCGCGACTCTCCAGCCCTGTGCTGCACC...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCAGACGGGCTCCGCGTaGGGATGGGAGTGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEQTGSA*GWEWAP
Trigger: TGGCGCCCACTCCCATCCCCACGCGGAGCCCGTCTG...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGGTCTCTTGGGCTGGTaGGGGTGGCGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGGLLGW*GWRWQW
Trigger: CCACTGCCACCGCCACCCCCACCAGCCCAAGAGACC...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGGTCTCTTGGGCTGGTaGGGGTGGCGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEGLLGW*GWRWQW
Trigger: CCACTGCCACCGCCACCCCCACCAGCCCAAGAGACC...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGTACCCGAGGGTGGCGTaGGGGCCCTGGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEYPRVA*GPWAHP
Trigger: AGGGTGAGCCCAGGGCCCCCACGCCACCCTCGGGTA...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGGCACGGCGGGCCGTCTaGCCAGAGGCTGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELARRAV*PEADAG
Trigger: ACCTGCATCAGCCTCTGGCCAGACGGCCCGCCGTGC...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGACGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGTCCATAGCCCTGACCTaGACCGCGCCTAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWSIALT*TAPRAS
Trigger: GGAGGCCCTAGGCGCGGTTCAGGTCAGGGCTATGGA...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGCCGTTAGAGAGCCGCTaGCCGATGGCACCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQPLESR*PMAPAS
Trigger: AGACGCGGGTGCCATCGGGCAGCGGCTCTCTAACGG...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCCGCTCCTCTTGCTCCTaGCGCTCCTGCTCCATCCGC +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCRSSCS*RSCSIR
Trigger: GCGGATGGAGCAGGAGCGGCAGGAGCAAGAGGAGCG...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGCCAGGCGGAGCTGCTaGGAATGCAGGCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVARRSC*ECRHGG
Trigger: CCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGC...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGGGAATCCGGAGTGGGTaGCAGGCGGAGCTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWGIRSG*QAELLR
Trigger: TCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCC...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGGGTGCAGCACAGGGCTaGAGAGTCGCGCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEGAAQG*RVAPAR
Trigger: ACGGGCTGGCGCGACTCTCCAGCCCTGTGCTGCACC...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGGGCGCCATCCTCCGGTaGCTGTCCAGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEGAILR*LSRWLP
Trigger: AGGCAGCCACCTGGACAGCCACCGGAGGATGGCGCC...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGCTCCGCGTGGGGATaGGAGTGGGCGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSGSAWG*EWAPSS
Trigger: GGAGGATGGCGCCCACTCCCATCCCCACGCGGAGCC...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGGTGGCGGTGGCAGTaGTGGAGGCTGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARGWRWQ*WRLRGG
Trigger: ACCTCCTCGCAGCCTCCACCACTGCCACCGCCACCC...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGACTGGGTCTCTTGGGCTaGTGGGGGTGGCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARLGLLG*WGWRWQ
Trigger: CTGCCACCGCCACCCCCACCAGCCCAAGAGACCCAG...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCTCCTGGGTCTCTTaGGCTGGTGGGGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARGSWVS*AGGGGG
Trigger: ACCGCCACCCCCACCAGCCCAAGAGACCCAGGAGCC...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGCTCACCCTGGAGTGTaGAGGCCCCTTCCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCAHPGV*RPLPRC
Trigger: GCAACGGGGAAGGGGCCTCCACACTCCAGGGTGAGC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGCCCTGGGCTCACCCTaGAGTGTGGAGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARALGSP*SVEAPS
Trigger: GGAAGGGGCCTCCACACTCCAGGGTGAGCCCAGGGC...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGCTCCTGCTCGAACCTaGGCCTCTCATCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCAPART*ASHPGP
Trigger: AGGCCCTGGATGAGAGGCTCAGGTTCGAGCAGGAGC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGCAGGCCATAGGTCAATaGGGCTGGTGGCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVQAIGQ*GWWRRG
Trigger: CCCCCGCCGCCACCAGCCTCATTGACCTATGGCCTG...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTAGGCCCCAAGCAGGGTaGGGCCTCCAACCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGRPQAG*GLQPGQ
Trigger: CTGGCCGGGTTGGAGGCCTCACCCTGCTTGGGGCCT...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCCGTTAGAGAGCCGCTaGCCGATGGCACCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEPLESR*PMAPAS
Trigger: AGACGCGGGTGCCATCGGGCAGCGGCTCTCTAACGG...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCGCAGCCGCAGTCGGTaGAGCACAGGGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAERSRSR*STGLES
Trigger: ACTCTCCAGCCCTGTGCTGCACCGACTGCGGCTGCG...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGGGTGCCCACGGGCTCTaGGTTCTCATCCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQGAHGL*VLILSQ
Trigger: CTGCGAGAGGATGAGAACGCAGAGCCCGTGGGCACC...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGGTGCCCACGGGCTCTaGGTTCTCATCCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGGAHGL*VLILSQ
Trigger: CTGCGAGAGGATGAGAACGCAGAGCCCGTGGGCACC...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGAGGGCCCGCTCTATCTaGTCAGCGACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELRARSI*SATGVE
Trigger: CTCCACCCCTGTCGCTGAGCAGATAGAGCGGGCCCT...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGGGCAGTGGTGGAGGCTaGGAGGAGGTGACCTCATCC +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWGSGGG*EEVTSS
Trigger: GGATGAGGTCACCTCCTCGCAGCCTCCACCACTGCC...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGGGCCTGAGGGGCTGCTaGTCTGGTCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQGLRGC*SGLLTV
Trigger: GACAGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCC...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGGCCTGAGGGGCTGCTaGTCTGGTCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCGLRGC*SGLLTV
Trigger: GACAGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCTGGGGCTCCGGCTCCTaGTCTTGCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGWGSGS*SCSSSS
Trigger: TGAGGAGCTGGAGCAAGAGCAGGAGCCGGAGCCCCA...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGTGGGGCTCCGGCTCCTaGTCTTGCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWWGSGS*SCSSSS
Trigger: TGAGGAGCTGGAGCAAGAGCAGGAGCCGGAGCCCCA...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGCGGAGCTGCTGCGAATaGAGGCACGGCGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTRSCCE*RHGGPS
Trigger: AGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCG...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCCGGTGGCTGTCCAGGTaGCTGCCTGGTCGATGGTTG +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGRWLSR*LPGRWL
Trigger: CAACCATCGACCAGGCAGCCACCTGGACAGCCACCG...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTCAGACGGGCTCCGCGTaGGGATGGGAGTGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGQTGSA*GWEWAP
Trigger: TGGCGCCCACTCCCATCCCCACGCGGAGCCCGTCTG...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGGTGGCGGTGGCAGTaGTGGAGGCTGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVGWRWQ*WRLRGG
Trigger: ACCTCCTCGCAGCCTCCACCACTGCCACCGCCACCC...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGGGTGGCGGTGGCAGTaGTGGAGGCTGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTGWRWQ*WRLRGG
Trigger: ACCTCCTCGCAGCCTCCACCACTGCCACCGCCACCC...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGGCTCCTGGGTCTCTTaGGCTGGTGGGGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANGSWVS*AGGGGG
Trigger: ACCGCCACCCCCACCAGCCCAAGAGACCCAGGAGCC...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAATGGGGCTGGGCTCCTaGGTCTCTTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARMGLGS*VSWAGG
Trigger: CCCACCAGCCCAAGAGACCCAGGAGCCCAGCCCCAT...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGGCTCACCCTGGAGTGTaGAGGCCCCTTCCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEAHPGV*RPLPRC
Trigger: GCAACGGGGAAGGGGCCTCCACACTCCAGGGTGAGC...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCCCTGGGCTCACCCTaGAGTGTGGAGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANALGSP*SVEAPS
Trigger: GGAAGGGGCCTCCACACTCCAGGGTGAGCCCAGGGC...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTCTCAGTACCCGAGGGTaGCGTGGGGGCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGLSTRG*RGGPGL
Trigger: GAGCCCAGGGCCCCCACGCCACCCTCGGGTACTGAG...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCTGGGTCACAGAAGGTaGCTGGCGGCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWLGHRR*LAAQAA
Trigger: AGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAG...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGGGTGGTCTCGCCATTaGTTAGCAGGTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGGWSRH*LAGGAP
Trigger: CGGAGCCCCACCTGCTAACCAATGGCGAGACCACCC...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTACCCCTCACTGGCCTaGGTCCCCTCCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELYPSLA*VPSFWV
Trigger: CACCCAGAAGGAGGGGACCCAGGCCAGTGAGGGGTA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGTACCCCTCACTGGCCTaGGTCCCCTCCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEYPSLA*VPSFWV
Trigger: CACCCAGAAGGAGGGGACCCAGGCCAGTGAGGGGTA...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGCACGGCGGGCCGTCTaGCCAGAGGCTGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVARRAV*PEADAG
Trigger: ACCTGCATCAGCCTCTGGCCAGACGGCCCGCCGTGC...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGGCCGGAATCCGGAGTaGGTGCCAGGCGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTGRNPE*VPGGAA
Trigger: AGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCC...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGGGGTGCGGTGGCAGGTaGTATAGGGAAAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQGCGGR*YRERES
Trigger: GGACTCCCTTTCCCTATATCACCTGCCACCGCACCC...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR GCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGCGCAGCCGCAGTCGGTaGAGCACAGGGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTRSRSR*STGLES
Trigger: ACTCTCCAGCCCTGTGCTGCACCGACTGCGGCTGCG...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGCGCTCCTCTTGCTCCTaGCGCTCCTGCTCCATCCGC +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTRSSCS*RSCSIR
Trigger: GCGGATGGAGCAGGAGCGGCAGGAGCAAGAGGAGCG...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGGGCCTGAGGGGCTGCTaGTCTGGTCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEGLRGC*SGLLTV
Trigger: GACAGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCC...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTCCGGCTCCTGCTCTTaGTCCAGCTCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELSGSCS*SSSSRA
Trigger: AGCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGCTGGCTGCTGGCCAGTaGTGCAGTACCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPELAAGQ*CSTMPW
Trigger: CCATGGCATGGTACTGCAGCACTGGCCAGCAGCCAG...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGCCACCTTAGCCACGTaGCTGGCACAAGCGCACTTG +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGATLAT*LAQAHL
Trigger: CAAGTGCGCTTGTGCCAGCCACGTGGCTAAGGTGGC...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGAGAGCCGCTGCCCGATaGCACCCGCGTCTATGTCTT +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPERAAAR*HPRLCL
Trigger: AAGACATAGACGCGGGTGCCATCGGGCAGCGGCTCT...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCATGGGGCTGGGCTCCTaGGTCTCTTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: WVGKRPSPQPGPESGVGAMGLGS*VSWAGG
Trigger: CCCACCAGCCCAAGAGACCCAGGAGCCCAGCCCCAT...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGACAGCCTTCGCCTGCTaGCAGCAGTGGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVTAFAC*QQWLRS
Trigger: GCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGT...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTACAGCCTTCGCCTGCTaGCAGCAGTGGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSTAFAC*QQWLRS
Trigger: GCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGT...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGGCCGGAATCCGGAGTaGGTGCCAGGCGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGGRNPE*VPGGAA
Trigger: AGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCC...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGCTCCTGCTCGAACCTaGGCCTCTCATCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSAPART*ASHPGP
Trigger: AGGCCCTGGATGAGAGGCTCAGGTTCGAGCAGGAGC...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGCTCCTGCTCGAACCTaGGCCTCTCATCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVAPART*ASHPGP
Trigger: AGGCCCTGGATGAGAGGCTCAGGTTCGAGCAGGAGC...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTGCCTGGTCGATGGTTaGAGGGCGAGGGTACATCAC +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELCLVDG*RARVHH
Trigger: GTGATGTACCCTCGCCCTTCAACCATCGACCAGGCA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR TCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCACCTCTGCCAGGGTaGCCTCAGTACCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGAPLPG*PQYPRV
Trigger: CACCCTCGGGTACTGAGGTCACCCTGGCAGAGGTGC...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGCCCGCAGAGGCCGATaGGACTCTTTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARARRGR*DSFLLL
Trigger: AAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGC...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATAGGGCCCGCTCTATCTaGTCAGCGACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANRARSI*SATGVE
Trigger: CTCCACCCCTGTCGCTGAGCAGATAGAGCGGGCCCT...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGCCAGGCCTGAGGGGCTaGTGCTCTGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTPGLRG*CSGLLT
Trigger: AGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCCTGG...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGGCAGGGCCAGCACCCTaGTCAGCCCCCACTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLAPPLITTLEALLLFWAGPAP*SAPTPS
Trigger: GGAGGGAGTGGGGGCTGAGCAGGGTGCTGGCCCTGC...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTCCGTCTTCTGGTAGGTaGTGCCCACGGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSPSSGR*CPRALR
Trigger: ACGCAGAGCCCGTGGGCACCACCTACCAGAAGACGG...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGGGTTGTCAGGCCGCTaGGCAATAATAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCGLSGR*AIIAAA
Trigger: GGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCTTGAAGAACTCCCTTaGGTTGTCAGGCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWLEELP*VVRPLG
Trigger: GCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAG...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTGGCTGCCTGGTCGATaGTTGAAGGGCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELWLPGR*LKGEGT
Trigger: TGTACCCTCGCCCTTCAACCATCGACCAGGCAGCCA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGACCTCACTGTCTAGGATaGGGCTGGGCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARPHCLG*GWAPGS
Trigger: AGACCCAGGAGCCCAGCCCCATCCTAGACAGTGAGG...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCATCGTGGATCTCCGTaGCGTCAGCTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEHRGSP*RQLWQA
Trigger: AGCCTGCCACAGCTGACGCCACGGAGATCCACGATG...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGTGTCAGCTGCATCGTaGATCTCCGTGGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEVSAAS*ISVASA
Trigger: AGCTGACGCCACGGAGATCCACGATGCAGCTGACAC...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGGGTGGTCTCGCCATTaGTTAGCAGGTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTGWSRH*LAGGAP
Trigger: CGGAGCCCCACCTGCTAACCAATGGCGAGACCACCC...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGTACCCCTCACTGGCCTaGGTCCCCTCCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTYPSLA*VPSFWV
Trigger: CACCCAGAAGGAGGGGACCCAGGCCAGTGAGGGGTA...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGGCCTGCTACTTCCTTTaGGCCAGACAGGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWACYFL*ARQEGV
Trigger: GACCCCTTCCTGTCTGGCCCAAAGGAAGTAGCAGGC...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGCAGTACGGACGACCTaGTCGATGGTTGAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGAVRTT*SMVEGR
Trigger: TCGCCCTTCAACCATCGACCAGGTCGTCCGTACTGC...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR TCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGCAGCTTGGGAGTCCTTaGCACTGCAGAAGCCGTACA +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEQLGSP*HCRSRT
Trigger: TGTACGGCTTCTGCAGTGTCAAGGACTCCCAAGCTG...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCCAGCTTGGGAGTCCTTaGCACTGCAGAAGCCGTACA +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGQLGSP*HCRSRT
Trigger: TGTACGGCTTCTGCAGTGTCAAGGACTCCCAAGCTG...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGCTCCACCTCCGACTCTaGCTTCTTCATGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPELHLRL*LLHVGL
Trigger: GAGACCCACATGAAGAAGTCAGAGTCGGAGGTGGAG...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGGCCTGCTCCCAGAACTaGTCTCGGTTAATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELACSQN*SRLIRF
Trigger: GAAGCGGATTAACCGAGAGCAGTTCTGGGAGCAGGC...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCCTGCTCCCAGAACTaGTCTCGGTTAATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEACSQN*SRLIRF
Trigger: GAAGCGGATTAACCGAGAGCAGTTCTGGGAGCAGGC...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGGCAATAATAGCTGCTaGCTCCTCCACCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEGNNSC*LLHLRL
Trigger: GAGTCGGAGGTGGAGGAGGCAGCAGCTATTATTGCC...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGGGCAATAATAGCTaGTGCCTCCTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELLGNNS*CLLHLR
Trigger: TCGGAGGTGGAGGAGGCAGCAGCTATTATTGCCCAG...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTCAGCAGGGGCACCTCTaGCAGGGTGACCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGQQGHL*QGDLST
Trigger: GGTACTGAGGTCACCCTGGCAGAGGTGCCCCTGCTG...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AAAGAAGGGCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGGCCAGGCGGAGCTGCTaGGAATGCAGGCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: KEGRGGGPREPEPTSHLLARRSC*ECRHGG
Trigger: CCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGC...CAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGCCCTTCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGAGTGCTGCAGTACCATaGCATGGATGCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELSAAVP*HGCPAI
Trigger: GATGGCTGGGCATCCATGGCATGGTACTGCAGCACT...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTGTCTTCCACGCTGCTaGCGTTCACGATCACGTCGA +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELCLPRC*RSRSRR
Trigger: TCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGTCCAGGTGGCTGCCTaGTCGATGGTTGAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSVQVAA*SMVEGR
Trigger: TCGCCCTTCAACCATCGACCAGGCAGCCACCTGGAC...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGGGTCTCTTGGGCTGGTaGGGGTGGCGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LGLAPPLITTLEALLLFWGLLGW*GWRWQW
Trigger: CCACTGCCACCGCCACCCCCACCAGCCCAAGAGACC...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGTCACAGAAGGTGGCTaGCGGCTCAGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSVTEGG*RLRQLI
Trigger: GATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGAC...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGTGGGTCCCCTCCTTCTaGGTGGTCTCGCCATTGGTT +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEWVPSF*VVSPLV
Trigger: AACCAATGGCGAGACCACCCAGAAGGAGGGGACCCA...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGCCCTCCTCCTCTTCTaGAACTGGGTCTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARALLLF*NWVCIP
Trigger: TGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGC...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGGGAAGGAGGGGTaGAATTTGCAACAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWPGKEG*NLQQRL
Trigger: GAGACGCTGTTGCAAATTCCACCCCTCCTTCCCTGG...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATTGCCTGGTCGATGGTTaGAGGGCGAGGGTACATCAC +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANCLVDG*RARVHH
Trigger: GTGATGTACCCTCGCCCTTCAACCATCGACCAGGCA...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR TCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCAGCTCATCAAAGTTaGGAAGGGTGGCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEAAHQS*EGWHSL
Trigger: AAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGC...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWSSSCD*LKYPSL
Trigger: CAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGA...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGACTGCATCCCAGCATGTaGTGTCGATCTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARLHPSM*CRSLEA
Trigger: AGCCTCCAGAGATCGACATCACATGCTGGGATGCAG...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGACCTGGTCGATGGTTaGAGGGCGAGGGTACATCAC +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSDLVDG*RARVHH
Trigger: GTGATGTACCCTCGCCCTTCAACCATCGACCAGGTC...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTATGTCTTCCACGCTaGTGGCGTTCACGATCACGT +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELLCLPR*WRSRSR
Trigger: ACGTGATCGTGAACGCCAGCAGCGTGGAAGACATAG...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGACTCTTTCCTGCTaGTTGAAGAACTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GCQAELLRMQARRAVWPEATLSC*LKNSLG
Trigger: CCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGC...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGGTGGCTACCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATAGTCCTCTGCAGGGCTaGCTGGCCCCCGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GWLPTLKSSPRTQIPPHHSPLQG*LAPGEA
Trigger: CGCCTCCCCGGGGGCCAGGCAGCCCTGCAGAGGACT...ATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGGTAGCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCTTCAATGGTGTCAGCTaGATCGTGGATCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGFNGVS*IVDLRG
Trigger: GCCACGGAGATCCACGATGCAGCTGACACCATTGAA...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGTTCAATGGTGTCAGCTaGATCGTGGATCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQFNGVS*IVDLRG
Trigger: GCCACGGAGATCCACGATGCAGCTGACACCATTGAA...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGTACCATGCCATGGATaGCCAGCCATCTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCVPCHG*PAISSS
Trigger: AGAGGATGAGATGGCTGGGCATCCATGGCATGGTAC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR GCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGCTGCTGGCCAGTGCTaGAGTACCATGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVAAGQC*STMPWM
Trigger: CATCCATGGCATGGTACTGCAGCACTGGCCAGCAGC...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTTTGGCAGAGCAGCTTaGGAGTCCTTGACACTGCAG +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELFGRAA*ESLTLQ
Trigger: CTGCAGTGTCAAGGACTCCCAAGCTGCTCTGCCAAA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCATCACGTCGACACCCTaGAAGAACTCCGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCITSTP*KNSATL
Trigger: TAAGGTGGCGGAGTTCTTCCAGGGTGTCGACGTGAT...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATCTTGAAGAACTCCCTTaGGTTGTCAGGCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANLEELP*VVRPLG
Trigger: GCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAG...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATTGGCTGCCTGGTCGATaGTTGAAGGGCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANWLPGR*LKGEGT
Trigger: TGTACCCTCGCCCTTCAACCATCGACCAGGCAGCCA...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CCA 90 bp AAAGAAGGGCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGGGTCTCTTGGGCTGGTaGGGGTGGCGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KEGRGGGPREPEPTSHLLGLLGW*GWRWQW
Trigger: CCACTGCCACCGCCACCCCCACCAGCCCAAGAGACC...CAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGCCCTTCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTCCTCACTGTCTAGGATaGGGCTGGGCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGPHCLG*GWAPGS
Trigger: AGACCCAGGAGCCCAGCCCCATCCTAGACAGTGAGG...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACCCGAGGGTGGCGTaGGGGCCCTGGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQYPRVA*GPWAHP
Trigger: AGGGTGAGCCCAGGGCCCCCACGCCACCCTCGGGTA...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATTGGGTCCCCTCCTTCTaGGTGGTCTCGCCATTGGTT +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANWVPSF*VVSPLV
Trigger: AACCAATGGCGAGACCACCCAGAAGGAGGGGACCCA...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGCAGAGCTCTTCCGATTaGGCAAACTCCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQQSSSD*ANSSSC
Trigger: ACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTG...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTAAGAGCTACAATCTaGACCAGGGAAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELLRATI*TREGGV
Trigger: CACCCCTCCTTCCCTGGTCCAGATTGTAGCTCTTAG...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGCAGCTTGGGAGTCCTTaGCACTGCAGAAGCCGTACA +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTQLGSP*HCRSRT
Trigger: TGTACGGCTTCTGCAGTGTCAAGGACTCCCAAGCTG...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTCTCCACCTCCGACTCTaGCTTCTTCATGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSLHLRL*LLHVGL
Trigger: GAGACCCACATGAAGAAGTCAGAGTCGGAGGTGGAG...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGCAGGCCATAGGTCAATaGGGCTGGTGGCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVQAIGQ*GWWRRG
Trigger: CCCCCGCCGCCACCAGCCTCATTGACCTATGGCCTG...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAAACTCCTCCTCCTGTaGTTGACTGAAGTACCCCTC +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQKLLLL*LTEVPL
Trigger: GAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTT...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCTGGCACAAGCGCACTTaGGGGCATCAGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: WVGKRPSPQPGPESGVGAWHKRT*GHQAHL
Trigger: AAGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCA...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTTCTTCCTTCTTGGCCTaGTCCCAGAACTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSSSFLA*SQNCSR
Trigger: CCGAGAGCAGTTCTGGGAGCAGGCCAAGAAGGAAGA...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGGCAATAATAGCTGCTaGCTCCTCCACCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANGNNSC*LLHLRL
Trigger: GAGTCGGAGGTGGAGGAGGCAGCAGCTATTATTGCC...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGCTGGGCAATAATAGCTaGTGCCTCCTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVLGNNS*CLLHLR
Trigger: TCGGAGGTGGAGGAGGCAGCAGCTATTATTGCCCAG...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGCCAGGCCTGAGGGGCTaGTGCTCTGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LGLAPPLITTLEALLLFWPGLRG*CSGLLT
Trigger: AGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCCTGG...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCCAGGACAGCCTGCTCTaGAGACTCCATGAACATCAA +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGQDSLL*RLHEHQ
Trigger: TTGATGTTCATGGAGTCTGCAGAGCAGGCTGTCCTG...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGCAGCAGGGGCACCTCTaGCAGGGTGACCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: LGLAPPLITTLEALLLFWQQGHL*QGDLST
Trigger: GGTACTGAGGTCACCCTGGCAGAGGTGCCCCTGCTG...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGTGGGGCTCCGGCTCCTaGTCTTGCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGLAPPLITTLEALLLFWWGSGS*SCSSSS
Trigger: TGAGGAGCTGGAGCAAGAGCAGGAGCCGGAGCCCCA...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCTTCTGGAACTGGGTCTaGATCCCAGCATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGFWNWV*IPACDV
Trigger: GACATCACATGCTGGGATGCAGACCCAGTTCCAGAA...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTTCTGGAACTGGGTCTaGATCCCAGCATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELFWNWV*IPACDV
Trigger: GACATCACATGCTGGGATGCAGACCCAGTTCCAGAA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCCCACTGTCCGATaGCTTTATGAAAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: VGARRSCCECRHGGPSGQRPTVR*LYERAV
Trigger: TACTGCCCTTTCATAAAGGCATCGGACAGTGGGCCT...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR GCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTCCCTCCCAAATGCCTaGTCCCCACCCGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQSLPNA*SPPGGQ
Trigger: CTGGCCCCCGGGTGGGGAGCAGGCATTTGGGAGGGA...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGTGTCTTCCACGCTGCTaGCGTTCACGATCACGTCGA +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTCLPRC*RSRSRR
Trigger: TCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACA...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGACCTTCAACCGCCTCTTaGCCTCTTCCGCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARPSTAS*PLPLLK
Trigger: CTTTAGAAGCGGAAGAGGCCAAGAGGCGGTTGAAGG...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCTCCTCCTCATCCCGATaGTCACCAAAGATAGACTGC +
Preference number: 4 (lower is better)
Translates to: VPGGAAANAGTAGRLARGSSSSR*SPKIDC
Trigger: GCAGTCTATCTTTGGTGACCATCGGGATGAGGAGGA...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGCTGGGTCTCTTGGGCTaGTGGGGGTGGCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVLGLLG*WGWRWQ
Trigger: CTGCCACCGCCACCCCCACCAGCCCAAGAGACCCAG...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGTTCGCGGTCGCCATGTaGCAGCAAACATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVFAVAM*QQTSFH
Trigger: GTGGAAGGATGTTTGCTGCCACATGGCGACCGCGAA...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGGAGGAAGAGAGGTTTaGGGTGCGGTGGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGGGREV*GAVAGD
Trigger: ATCACCTGCCACCGCACCCCAAACCTCTCTTCCTCC...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR TCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTG +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANSSSCD*LKYPSL
Trigger: CAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGA...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGATGCGACTCTTTCCTaGTGCTTGAAGAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: RPSPQPGPESGVGARRSCDATLS*CLKNSL
Trigger: AAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTTGGGGCTCCGGCTCCTaGTCTTGCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGRGSQGARAHEPFIAMFWGSGS*SCSSSS
Trigger: TGAGGAGCTGGAGCAAGAGCAGGAGCCGGAGCCCCA...AAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp AAAGAAGGGCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGGGCCCCAGCTGGGCCTaGTACTTCCTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KEGRGGGPREPEPTSHLLGPSWA*YFLWAR
Trigger: TCTGGCCCAAAGGAAGTAGCAGGCCCAGCTGGGGCC...CAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGCCCTTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCACCAGGCAGTCCCTaGCGCACCTGGGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPPPGSP*RTWVPS
Trigger: GGAGGGGACCCAGGTGCGGCAGGGACTGCCTGGTGG...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCCGTACATCACCTTCTaGTTCTCAAAGTGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELPYITF*FSKCPE
Trigger: TTCGGGACACTTTGAGAACCAGAAGGTGATGTACGG...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATTTTGGCAGAGCAGCTTaGGAGTCCTTGACACTGCAG +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANFGRAA*ESLTLQ
Trigger: CTGCAGTGTCAAGGACTCCCAAGCTGCTCTGCCAAA...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTTTTGGCAGAGCAGCTTaGGAGTCCTTGACACTGCAG +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSFGRAA*ESLTLQ
Trigger: CTGCAGTGTCAAGGACTCCCAAGCTGCTCTGCCAAA...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGGATGAGCACGTATTTTaGCAGAGCAGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEDEHVF*QSSLGV
Trigger: GACTCCCAAGCTGCTCTGCCAAAATACGTGCTCATC...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCTCTTCTTCCTTCTTaGCCTGCTCCCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANALLPS*PAPRTA
Trigger: AGCAGTTCTGGGAGCAGGCCAAGAAGGAAGAAGAGC...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGGTGGCTACCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCGTGGCGTCAGCTGTaGCAGGCTCCACGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GWLPTLKSSPRTQIPPHHPWRQL*QAPREQ
Trigger: CTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGG...ATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGGTAGCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCAGTGTCAGTTTCAATaGTGTCAGCTGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: RSGCQAELLRMQARRAVWQCQFQ*CQLHRG
Trigger: TCCACGATGCAGCTGACACCATTGAAACTGACACTG...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCAGTGGTGTCAGCAGTaGCAGTGTCAGTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEQWCQQ*QCQFQW
Trigger: CCATTGAAACTGACACTGCCACTGCTGACACCACTG...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGCTCCTCTTCTGGAACTaGGTCTGCATCCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVLLFWN*VCIPAC
Trigger: ACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATTGCAGTACCATGCCATaGATGCCCAGCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANCSTMP*MPSHLI
Trigger: GATGAGATGGCTGGGCATCCATGGCATGGTACTGCA...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR TCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTCGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGGGCAGTGGTGGAGGCTaGGAGGAGGTGACCTCATCC +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQGSGGG*EEVTSS
Trigger: GGATGAGGTCACCTCCTCGCAGCCTCCACCACTGCC...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCTTCTGGAACTGGGTCTaGATCCCAGCATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: WVGKRPSPQPGPESGVGAFWNWV*IPACDV
Trigger: GACATCACATGCTGGGATGCAGACCCAGTTCCAGAA...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGAGGGGTGGAATTTaGAACAGCGTCTCAACTACC +
Preference number: 4 (lower is better)
Translates to: WVGKRPSPQPGPESGVGARRGGI*NSVSTT
Trigger: GGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCT...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTTCCTCCTCATCCCGATaGTCACCAAAGATAGACTGC +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSSSSSR*SPKIDC
Trigger: GCAGTCTATCTTTGGTGACCATCGGGATGAGGAGGA...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGCGGTGGCTGTCCAGGTaGCTGCCTGGTCGATGGTTG +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQRWLSR*LPGRWL
Trigger: CAACCATCGACCAGGCAGCCACCTGGACAGCCACCG...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TACTACCTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTGGCACAGAGCTGCGTGGGGATGGGAGTaGGCGCCATCCTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: YYLEACCRTQEAEPWHRAAWGWE*APSSGG
Trigger: GCCACCGGAGGATGGCGCCCACTCCCATCCCCACGC...AGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTGGGTGGCGGTGGCAGTaGTGGAGGCTGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTGWRWQ*WRLRGG
Trigger: ACCTCCTCGCAGCCTCCACCACTGCCACCGCCACCC...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTGGCTCCTGGGTCTCTTaGGCTGGTGGGGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTGSWVS*AGGGGG
Trigger: ACCGCCACCCCCACCAGCCCAAGAGACCCAGGAGCC...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGACAGTGTCAGTTTCAATaGTGTCAGCTGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: WVPGGAAANAGTAGRLARQCQFQ*CQLHRG
Trigger: TCCACGATGCAGCTGACACCATTGAAACTGACACTG...TCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATCAGTGGTGTCAGCAGTaGCAGTGTCAGTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANQWCQQ*QCQFQW
Trigger: CCATTGAAACTGACACTGCCACTGCTGACACCACTG...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTCTCAGTACCCGAGGGTaGCGTGGGGGCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PSSSSGTGSASQHVMSISLSTRG*RGGPGL
Trigger: GAGCCCAGGGCCCCCACGCCACCCTCGGGTACTGAG...AGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATACAGCCTTCGCCTGCTaGCAGCAGTGGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SPPSKPSSSSGTGSASQHTAFAC*QQWLRS
Trigger: GCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGT...ATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGCTGGGTCACAGAAGGTaGCTGGCGGCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVLGHRR*LAAQAA
Trigger: AGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAG...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTGTGATGTCGATCTCTaGAGGCTTGTTGTAGAACAC +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELCDVDL*RLVVEH
Trigger: GTGTTCTACAACAAGCCTCCAGAGATCGACATCACA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGCTCCACCTCCGACTCTaGCTTCTTCATGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGLAPPLITTLEALLLFWLHLRL*LLHVGL
Trigger: GAGACCCACATGAAGAAGTCAGAGTCGGAGGTGGAG...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTGCACCTCTGCCAGGGTaGCCTCAGTACCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPAPLPG*PQYPRV
Trigger: CACCCTCGGGTACTGAGGTCACCCTGGCAGAGGTGC...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTTCGTGCAAAATATCTaGAGCCCTGGACAGAGAATA +
Preference number: 4 (lower is better)
Translates to: AAKSPARAGIRSGCQAELFVQNI*SPGQRI
Trigger: TATTCTCTGTCCAGGGCTTCAGATATTTTGCACGAA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCAGCAGGACTGGGGCTaGCCTATCAGGCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPQQDWG*PIRPEP
Trigger: GGGCTCAGGCCTGATAGGTCAGCCCCAGTCCTGCTG...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTCTTCATTTCCACAGCTaGATCCGTCTTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSLHFHS*IRLLVG
Trigger: ACCTACCAGAAGACGGATGCAGCTGTGGAAATGAAG...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGTCACCAAAGATAGACTaGTCCTTCAACCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTSPKID*SFNRLL
Trigger: CAAGAGGCGGTTGAAGGAGCAGTCTATCTTTGGTGA...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCTCACCAAAGATAGACTaGTCCTTCAACCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WVGKRPSPQPGPESGVGASPKID*SFNRLL
Trigger: CAAGAGGCGGTTGAAGGAGCAGTCTATCTTTGGTGA...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGATGCGACTCTTTCCTaGTGCTTGAAGAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTDATLS*CLKNSL
Trigger: AAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATC...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGCCGTACATCACCTTCTaGTTCTCAAAGTGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVPYITF*FSKCPE
Trigger: TTCGGGACACTTTGAGAACCAGAAGGTGATGTACGG...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTGGGTTGTCAGGCCGCTaGGCAATAATAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGRGSQGARAHEPFIAMFGLSGR*AIIAAA
Trigger: GGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCC...AAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGGGCTCCGCGTGGGGATaGGAGTGGGCGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALEREGSAWG*EWAPSS
Trigger: GGAGGATGGCGCCCACTCCCATCCCCACGCGGAGCC...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGCCTCACTGTCTAGGATaGGGCTGGGCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVPHCLG*GWAPGS
Trigger: AGACCCAGGAGCCCAGCCCCATCCTAGACAGTGAGG...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTCAGTGTCAGTTTCAATaGTGTCAGCTGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSQCQFQ*CQLHRG
Trigger: TCCACGATGCAGCTGACACCATTGAAACTGACACTG...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CTAGGGCTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGTCCCCTCCTTCTGGGTaGTCTCGCCATTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: LGLAPPLITTLEALLLFWSPPSG*SRHWLA
Trigger: TGCTAACCAATGGCGAGACCACCCAGAAGGAGGGGA...CCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTCAGGAGGCGGAGCCTTaGCACAGAGCTCTTCCGATT +
Preference number: 4 (lower is better)
Translates to: AGRGSQGARAHEPFIAMFQEAEP*HRALPI
Trigger: AATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTG...AAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTAGTCCCTGCCGCACCTaGGTCCCCTCCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPSPCRT*VPSFWV
Trigger: CACCCAGAAGGAGGGGACCCAGGTGCGGCAGGGACT...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp AAAGAAGGGCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCTGCATCCCAGCATGTaGTGTCGATCTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KEGRGGGPREPEPTSHLLLHPSM*CRSLEA
Trigger: AGCCTCCAGAGATCGACATCACATGCTGGGATGCAG...CAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGCCCTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR TCA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGTTCGTGCAAAATATCTaGAGCCCTGGACAGAGAATA +
Preference number: 4 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEFVQNI*SPGQRI
Trigger: TATTCTCTGTCCAGGGCTTCAGATATTTTGCACGAA...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp TCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATCTGACCTATCAGGCCTaGGCCCGTTTCCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SPPSKPSSSSGTGSASQHLTYQA*ARFPSN
Trigger: GTTGCTGGGGAAACGGGCTCAGGCCTGATAGGTCAG...ATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp GCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTTCTTCCTTCTTGGCCTaGTCCCAGAACTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: AGRGSQGARAHEPFIAMFSSFLA*SQNCSR
Trigger: CCGAGAGCAGTTCTGGGAGCAGGCCAAGAAGGAAGA...AAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTAGGGCCCGCTCTATCTaGTCAGCGACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTRARSI*SATGVE
Trigger: CTCCACCCCTGTCGCTGAGCAGATAGAGCGGGCCCT...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGTACCCCTCACTGGCCTaGAGGGGAAAGCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVYPSLA*RGKHQV
Trigger: GACCTGATGCTTTCCCCTGCAGGCCAGTGAGGGGTA...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AAAGAAGGGCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGTGTCTTCCACGCTGCTaGCGTTCACGATCACGTCGA +
Preference number: 4 (lower is better)
Translates to: KEGRGGGPREPEPTSHLLCLPRC*RSRSRR
Trigger: TCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACA...CAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGCCCTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGCTTGAAGAACTCCCTTaGGTTGTCAGGCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVLEELP*VVRPLG
Trigger: GCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAG...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTTAAAAGGCGCCATCCTCCGGTaGCTGTCCAGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EGVPGSQSPRAIYCHVLKGAILR*LSRWLP
Trigger: AGGCAGCCACCTGGACAGCCACCGGAGGATGGCGCC...TTTTAAAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGCAGACGGGCTCCGCGTaGGGATGGGAGTGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQQTGSA*GWEWAP
Trigger: TGGCGCCCACTCCCATCCCCACGCGGAGCCCGTCTG...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTACAGACGGGCTCCGCGTaGGGATGGGAGTGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SSGTGSASQHVMSISVALQTGSA*GWEWAP
Trigger: TGGCGCCCACTCCCATCCCCACGCGGAGCCCGTCTG...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTTAAAACCGTGGCGTCAGCTGTaGCAGGCTCCACGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EGVPGSQSPRAIYCHVLKPWRQL*QAPREQ
Trigger: CTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGG...TTTTAAAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGCTCACCCTGGAGTGTaGAGGCCCCTTCCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGAHPGV*RPLPRC
Trigger: GCAACGGGGAAGGGGCCTCCACACTCCAGGGTGAGC...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGGCCCTGGGCTCACCCTaGAGTGTGGAGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALEREALGSP*SVEAPS
Trigger: GGAAGGGGCCTCCACACTCCAGGGTGAGCCCAGGGC...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTGGGTGGTCTCGCCATTaGTTAGCAGGTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPGWSRH*LAGGAP
Trigger: CGGAGCCCCACCTGCTAACCAATGGCGAGACCACCC...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGTGGGTCCCCTCCTTCTaGGTGGTCTCGCCATTGGTT +
Preference number: 4 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVWVPSF*VVSPLV
Trigger: AACCAATGGCGAGACCACCCAGAAGGAGGGGACCCA...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGGGGGGCCAGGCCCTCTaGTTTCCAGCTGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALEREGGQAL*FPAAAW
Trigger: CCACGCTGCAGCTGGAAACCAGAGGGCCTGGCCCCC...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTCTCCAAGCCTCAGCATaGGAGACTGGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTLQASA*ETGLPP
Trigger: GGGAGGGAGGCCAGTCTCCCATGCTGAGGCTTGGAG...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGCTGCATCCCAGCATGTaGTGTCGATCTCTGTGGCGT +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQLHPSM*CRSLWR
Trigger: ACGCCACAGAGATCGACATCACATGCTGGGATGCAG...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTGCCCGCAGAGGCCGATaGGACTCTTTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTARRGR*DSFLLL
Trigger: AAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGC...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGGCCTGAGGGGCTGCTaGTCTGGTCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: PSSSSGTGSASQHVMSISGLRGC*SGLLTV
Trigger: GACAGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCC...AGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGGCACAGCCTTCGCCTaGTGGCAGCAGTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SSGTGSASQHVMSISVALGTAFA*WQQWLR
Trigger: CCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCC...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGCGGAGCTGCTGCGAATaGAGGCACGGCGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQRSCCE*RHGGPS
Trigger: AGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCG...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGAGCAGCTCCAGGCGGTaGCCGCTGAAGCTGACGCCG +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQSSSRR*PLKLTP
Trigger: CGGCGTCAGCTTCAGCGGCCACCGCCTGGAGCTGCT...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAGGTGCAGCACAGGGCTaGAGAGTCGCGCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSGAAQG*RVAPAR
Trigger: ACGGGCTGGCGCGACTCTCCAGCCCTGTGCTGCACC...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGGCGCCATCCTCCGGTaGCTGTCCAGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSGTGSASQHVMSISVALGAILR*LSRWLP
Trigger: AGGCAGCCACCTGGACAGCCACCGGAGGATGGCGCC...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCACTGGGTCTCTTGGGCTaGTGGGGGTGGCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSLGLLG*WGWRWQ
Trigger: CTGCCACCGCCACCCCCACCAGCCCAAGAGACCCAG...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGATGGGGCTGGGCTCCTaGGTCTCTTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSSSGTGSASQHVMSISVMGLGS*VSWAGG
Trigger: CCCACCAGCCCAAGAGACCCAGGAGCCCAGCCCCAT...CACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTCATCGTGGATCTCCGTaGCGTCAGCTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTHRGSP*RQLWQA
Trigger: AGCCTGCCACAGCTGACGCCACGGAGATCCACGATG...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCGCCCGCTCGAAGGTaGCGAAGGTGCCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQSPARR*RRCPWP
Trigger: CGGCCAAGGGCACCTTCGCCACCTTCGAGCGGGCGA...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR TCA 90 bp GCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTAAACTCCTCCTCCTGTaGTTGACTGAAGTACCCCTC +
Preference number: 4 (lower is better)
Translates to: AGRGSQGARAHEPFIAMFKLLLL*LTEVPL
Trigger: GAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTT...AAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR TCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTGTACTGGTGCAAGCATaGGGAATGCAGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPVLVQA*GMQGQH
Trigger: GTGCTGGCCCTGCATTCCTCATGCTTGCACCAGTAC...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp ATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGGAGTTAGGGTGTCCCCAGCCTCTGTaGGCGGTGGGTAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IPACDVDLCGVRKGEELGCPQPL*AVGSGG
Trigger: CCCACCACTACCCACCGCTCACAGAGGCTGGGGACA...CCCTAACTCCTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCACCGTTAGAGAGCCGCTaGCCGATGGCACCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSPLESR*PMAPAS
Trigger: AGACGCGGGTGCCATCGGGCAGCGGCTCTCTAACGG...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGGTGGCTACCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATGGCAATAATAGCTGCTaGCTCCTCCACCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: GWLPTLKSSPRTQIPPHHGNNSC*LLHLRL
Trigger: GAGTCGGAGGTGGAGGAGGCAGCAGCTATTATTGCC...ATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGGTAGCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAATGGGGCTGGGCTCCTaGGTCTCTTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSMGLGS*VSWAGG
Trigger: CCCACCAGCCCAAGAGACCCAGGAGCCCAGCCCCAT...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTTACCCGAGGGTGGCGTaGGGGCCCTGGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSYPRVA*GPWAHP
Trigger: AGGGTGAGCCCAGGGCCCCCACGCCACCCTCGGGTA...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGCTCCTCTTCTGGAACTaGGTCTGCATCCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQLLFWN*VCIPAC
Trigger: ACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp CCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTTGCCTGGTCGATGGTTaGAGGGCGAGGGTACATCAC +
Preference number: 4 (lower is better)
Translates to: PSSSSGTGSASQHVMSISCLVDG*RARVHH
Trigger: GTGATGTACCCTCGCCCTTCAACCATCGACCAGGCA...AGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCAGGCCATAGGTCAATaGGGCTGGTGGCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSQAIGQ*GWWRRG
Trigger: CCCCCGCCGCCACCAGCCTCATTGACCTATGGCCTG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGAAACTCCTCCTCCTGTaGTTGACTGAAGTACCCCTC +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQKLLLL*LTEVPL
Trigger: GAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTT...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGTCCGGCTCCTGCTCTTaGTCCAGCTCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: WVCIPACDVDLCGVRKGESGSCS*SSSSRA
Trigger: AGCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGA...CTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTGGTGCCAGGCGGAGCTaGTGCGAATGCAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSGARRS*CECRHG
Trigger: GCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACC...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTCCACGAGCCATTTATTaGCATGTTTTAAAATTCGTG +
Preference number: 4 (lower is better)
Translates to: GPVGREAAKSPARAGIRSPRAIY*HVLKFV
Trigger: CACGAATTTTAAAACATGGCAATAAATGGCTCGTGG...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTTAAAAGCCACCTTAGCCACGTaGCTGGCACAAGCGCACTTG +
Preference number: 4 (lower is better)
Translates to: EGVPGSQSPRAIYCHVLKATLAT*LAQAHL
Trigger: CAAGTGCGCTTGTGCCAGCCACGTGGCTAAGGTGGC...TTTTAAAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp TACTACCTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTGGCACAGAGCTTGGCTGCCTGGTCGATaGTTGAAGGGCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: YYLEACCRTQEAEPWHRAWLPGR*LKGEGT
Trigger: TGTACCCTCGCCCTTCAACCATCGACCAGGCAGCCA...AGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGTCCAGGTGGCTGCCTaGTCGATGGTTGAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSSSGTGSASQHVMSISVVQVAA*SMVEGR
Trigger: TCGCCCTTCAACCATCGACCAGGCAGCCACCTGGAC...CACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGCGGTGGCTGTCCAGGTaGCTGCCTGGTCGATGGTTG +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQRWLSR*LPGRWL
Trigger: CAACCATCGACCAGGCAGCCACCTGGACAGCCACCG...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCGTGGCGTCAGCTGTaGCAGGCTCCACGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSPWRQL*QAPREQ
Trigger: CTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGGTCACAGAAGGTGGCTaGCGGCTCAGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALEREVTEGG*RLRQLI
Trigger: GATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGAC...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCACTGGGTCACAGAAGGTaGCTGGCGGCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSLGHRR*LAAQAA
Trigger: AGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAG...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTCAGGAGGCGGAGCCTTaGCACAGAGCTCTTCCGATT +
Preference number: 4 (lower is better)
Translates to: PSSSSGTGSASQHVMSISQEAEP*HRALPI
Trigger: AATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTG...AGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGCCCAGGGAGGGAGGGTaGGATGGACTTCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALEREPREGG*DGLPLK
Trigger: TTTGAGGGGAAGTCCATCCCACCCTCCCTCCCTGGG...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTAGGCCCCAAGCAGGGTaGGGCCTCCAACCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTRPQAG*GLQPGQ
Trigger: CTGGCCGGGTTGGAGGCCTCACCCTGCTTGGGGCCT...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCCGATGGTCACCTGTaGGATGTAGACATCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPPDGHL*DVDIKS
Trigger: GGACTTGATGTCTACATCTCACAGGTGACCATCGGG...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTCTGGGCAATAATAGCTaGTGCCTCCTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: PSSSSGTGSASQHVMSISLGNNS*CLLHLR
Trigger: TCGGAGGTGGAGGAGGCAGCAGCTATTATTGCCCAG...AGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CCCACACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGGATGCGACTCTTTCCTaGTGCTTGAAGAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: PTLKSSPRTQIPPHHPAQDATLS*CLKNSL
Trigger: AAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATC...CTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp TCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATTTCTGGAACTGGGTCTaGATCCCAGCATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SPPSKPSSSSGTGSASQHFWNWV*IPACDV
Trigger: GACATCACATGCTGGGATGCAGACCCAGTTCCAGAA...ATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp TCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGATTCCATCAGTGGTTaGCAGGGAAACAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: SPPSKPSSSSGTGSASQHDSISG*QGNKDA
Trigger: GGCATCCTTGTTTCCCTGGCAACCACTGATGGAATC...ATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGAGGGGCTGCTGCTCTaGTCTCCTCACTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: SSSSGTGSASQHVMSISVEGLLL*SPHCLG
Trigger: TCCTAGACAGTGAGGAGACCAGAGCAGCAGCCCCTC...CACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTGGCCACCAAAGCCCCTaGGCCCCATCCATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSGHQSP*APSIAL
Trigger: CAGGGCTATGGATGGGGCCCAGGGGCTTTGGTGGCC...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCTGGGTAGTGGTGGGGTaGCTACCCACACTCAAATCC +
Preference number: 4 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGWVVVG*LPTLKS
Trigger: GGATTTGAGTGTGGGTAGCCACCCCACCACTACCCA...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAAGCCTCTGTGAGCGGTaGGTAGTGGTGGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: SSGTGSASQHVMSISVALSLCER*VVVGWL
Trigger: TAGCCACCCCACCACTACCCACCGCTCACAGAGGCT...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGCGACTCTTTCCTGCTaGTTGAAGAACTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGATLSC*LKNSLG
Trigger: CCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGC...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp CCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTTTCAATGGTGTCAGCTaGATCGTGGATCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PSSSSGTGSASQHVMSISFNGVS*IVDLRG
Trigger: GCCACGGAGATCCACGATGCAGCTGACACCATTGAA...AGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGGCACAGCCTTCGCCTaGTGGCAGCAGTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQGTAFA*WQQWLR
Trigger: CCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCC...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGGCACAGCCTTCGCCTaGTGGCAGCAGTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTGTAFA*WQQWLR
Trigger: CCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAACGGAGCTGCTGCGAATaGAGGCACGGCGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQRSCCE*RHGGPS
Trigger: AGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCG...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAACGAAGGTGGCGAAGGTaGCCTTGGCCGCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQRRWRR*PWPPRA
Trigger: TGCACGGGGCGGCCAAGGGCACCTTCGCCACCTTCG...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGGGTTGTCAGGCCGCTaGGCAATAATAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSGTGSASQHVMSISVALGLSGR*AIIAAA
Trigger: GGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCC...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGCGTGGGGATGGGAGTaGGCGCCATCCTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFAWGWE*APSSGG
Trigger: GCCACCGGAGGATGGCGCCCACTCCCATCCCCACGC...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AAAACAGTTACTAAACGTGAAAAAGGAACCCAAGCAAAGAGGAAGGAGTTGGGGGGCTCCGCGTGGGGATaGGAGTGGGCGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: KTVTKREKGTQAKRKELGGSAWG*EWAPSS
Trigger: GGAGGATGGCGCCCACTCCCATCCCCACGCGGAGCC...CCCCAACTCCTTCCTCTTTGCTTGGGTTCCTTTTTCACGTTTAGTAACTGTTTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGCTGGGTCTCTTGGGCTaGTGGGGGTGGCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKLGLLG*WGWRWQ
Trigger: CTGCCACCGCCACCCCCACCAGCCCAAGAGACCCAG...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGGCTCCTGGGTCTCTTaGGCTGGTGGGGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTGSWVS*AGGGGG
Trigger: ACCGCCACCCCCACCAGCCCAAGAGACCCAGGAGCC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGGAGGGGCTGCTGCTCTaGTCTCCTCACTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQEGLLL*SPHCLG
Trigger: TCCTAGACAGTGAGGAGACCAGAGCAGCAGCCCCTC...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp ATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGGAGTTAGGGGTGTCAGCTGCATCGTaGATCTCCGTGGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: IPACDVDLCGVRKGEELGVSAAS*ISVASA
Trigger: AGCTGACGCCACGGAGATCCACGATGCAGCTGACAC...CCCTAACTCCTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGCCCTGGGCTCACCCTaGAGTGTGGAGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTALGSP*SVEAPS
Trigger: GGAAGGGGCCTCCACACTCCAGGGTGAGCCCAGGGC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCATGGGTCCCCTCCTTCTaGGTGGTCTCGCCATTGGTT +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSWVPSF*VVSPLV
Trigger: AACCAATGGCGAGACCACCCAGAAGGAGGGGACCCA...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp ATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGGAGTTAGGGGCCCTCCTCCTCTTCTaGAACTGGGTCTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: IPACDVDLCGVRKGEELGALLLF*NWVCIP
Trigger: TGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGC...CCCTAACTCCTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCGGTGGCTGTCCAGGTaGCTGCATGGGAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSRWLSR*LHGREE
Trigger: TTCCTCCCTCCCATGCAGCCACCTGGACAGCCACCG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTACTCAGCATGGGAGACTaGCCTCCCTCCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: SSGTGSASQHVMSISVALLSMGD*PPSQMP
Trigger: AGGCATTTGGGAGGGAGGCCAGTCTCCCATGCTGAG...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CCCTCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGGAGGGAGGGTGGGATaGACTTCCCCTCAAATAATG +
Preference number: 4 (lower is better)
Translates to: PSSSSGTGSASQHVMSISGGRVG*TSPQIM
Trigger: CATTATTTGAGGGGAAGTCCATCCCACCCTCCCTCC...AGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCAGCCCAGTACTACCTaGAGGCTTGTTGTAGAACAC +
Preference number: 4 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPQPSTT*RLVVEH
Trigger: GTGTTCTACAACAAGCCTCCAGGTAGTACTGGGCTG...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTCAGGCCATAGGTCAATaGGGCTGGTGGCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFQAIGQ*GWWRRG
Trigger: CCCCCGCCGCCACCAGCCTCATTGACCTATGGCCTG...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGCACCTCTGCCAGGGTaGCCTCAGTACCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQAPLPG*PQYPRV
Trigger: CACCCTCGGGTACTGAGGTCACCCTGGCAGAGGTGC...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGGCAGCTCATCAAAGTTaGGAAGGGTGGCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALEREAAHQS*EGWHSL
Trigger: AAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGC...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp TGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTG +
Preference number: 4 (lower is better)
Translates to: WVCIPACDVDLCGVRKGESSSCD*LKYPSL
Trigger: CAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGA...CTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCACTGCATCCCAGCATGTaGTGTCGATCTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSLHPSM*CRSLEA
Trigger: AGCCTCCAGAGATCGACATCACATGCTGGGATGCAG...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp TACTACCTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTGGCACAGAGCTTTCCCCAGCAACCAATaGTTCCATCAGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: YYLEACCRTQEAEPWHRAFPSNQ*FHQWLP
Trigger: TGGCAACCACTGATGGAATCATTGGTTGCTGGGGAA...AGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGGCCTGCTCCCAGAACTaGTCTCGGTTAATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQACSQN*SRLIRF
Trigger: GAAGCGGATTAACCGAGAGCAGTTCTGGGAGCAGGC...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTGCCCGCAGAGGCCGATaGGACTCTTTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSARRGR*DSFLLL
Trigger: AAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGC...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGAAGGGGGTACTGGTaGAAGCATGAGGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALERERRGYW*KHEECR
Trigger: CCTGCATTCCTCATGCTTGCACCAGTACCCCCTTCT...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGGCTCCGCGTGGGGATaGGAGTGGGCGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFGSAWG*EWAPSS
Trigger: GGAGGATGGCGCCCACTCCCATCCCCACGCGGAGCC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCATCGTGGATCTCCGTaGCGTCAGCTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSHRGSP*RQLWQA
Trigger: AGCCTGCCACAGCTGACGCCACGGAGATCCACGATG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTGCTCACCCTGGAGTGTaGAGGCCCCTTCCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLAHPGV*RPLPRC
Trigger: GCAACGGGGAAGGGGCCTCCACACTCCAGGGTGAGC...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCTCAGTACCCGAGGGTaGCGTGGGGGCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFLSTRG*RGGPGL
Trigger: GAGCCCAGGGCCCCCACGCCACCCTCGGGTACTGAG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTGTCACAGAAGGTGGCTaGCGGCTCAGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSVTEGG*RLRQLI
Trigger: GATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGAC...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGCTAGGGCCTCCAACCTaGGACCTGCCCGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKLGPPT*DLPGRR
Trigger: TCTCCTGCCGGGCAGGTCCCAGGTTGGAGGCCCTAG...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp TGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGCAGAGAAGGGGGTACTaGTGCAAGCATGAGGAATGC +
Preference number: 4 (lower is better)
Translates to: WVCIPACDVDLCGVRKGEQRRGY*CKHEEC
Trigger: GCATTCCTCATGCTTGCACCAGTACCCCCTTCTCTG...CTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp CACTCAAATCCAGCCCCCGCACCCAAATTCCTCCCCATCATCCAGCCCAGTACTTCCCCTCAAATAATGTaGGTCACAGAGAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: HSNPAPAPKFLPIIQPSTSPQIM*VTEKGV
Trigger: TACCCCCTTCTCTGTGACCCACATTATTTGAGGGGA...AGTACTGGGCTGGATGATGGGGAGGAATTTGGGTGCGGGGGCTGGATTTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR TCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAGCAGCTCATCAAAGTTaGGAAGGGTGGCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSAAHQS*EGWHSL
Trigger: AAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGC...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTCGCTCCTCTTGCTCCTaGCGCTCCTGCTCCATCCGC +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFRSSCS*RSCSIR
Trigger: GCGGATGGAGCAGGAGCGGCAGGAGCAAGAGGAGCG...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGCCAGGCCTGAGGGGCTaGTGCTCTGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKPGLRG*CSGLLT
Trigger: AGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCCTGG...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTCCAGGCCTGAGGGGCTaGTGCTCTGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLPGLRG*CSGLLT
Trigger: AGTGAGGAGACCAGAGCAGCAGCCCCTCAGGCCTGG...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGCAGCAGGGGCACCTCTaGCAGGGTGACCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKQQGHL*QGDLST
Trigger: GGTACTGAGGTCACCCTGGCAGAGGTGCCCCTGCTG...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGGAATCCGGAGTGGGTaGCAGGCGGAGCTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFGIRSG*QAELLR
Trigger: TCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCC...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTAGCAGCTCCAGGCGGTaGCCGCTGAAGCTGACGCCG +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFSSSRR*PLKLTP
Trigger: CGGCGTCAGCTTCAGCGGCCACCGCCTGGAGCTGCT...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTCCGTCTTCTGGTAGGTaGTGCCCACGGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTPSSGR*CPRALR
Trigger: ACGCAGAGCCCGTGGGCACCACCTACCAGAAGACGG...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCACCTTCAACCGCCTCTTaGCCTCTTCCGCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSPSTAS*PLPLLK
Trigger: CTTTAGAAGCGGAAGAGGCCAAGAGGCGGTTGAAGG...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCCGTGGCGTCAGCTGTaGCAGGCTCCACGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFPWRQL*QAPREQ
Trigger: CTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCCAGTGTCAGTTTCAATaGTGTCAGCTGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGQCQFQ*CQLHRG
Trigger: TCCACGATGCAGCTGACACCATTGAAACTGACACTG...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp ATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGGAGTTAGGGCAGAGCTCTTCCGATTaGGCAAACTCCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: IPACDVDLCGVRKGEELGQSSSD*ANSSSC
Trigger: ACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTG...CCCTAACTCCTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGCTCCTCTTCTGGAACTaGGTCTGCATCCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQLLFWN*VCIPAC
Trigger: ACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGGCCGGAATCCGGAGTaGGTGCCAGGCGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFGRNPE*VPGGAA
Trigger: AGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCCGAGGGGCCCCAGCTaGGCCTGCTACTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFPRGPS*ACYFLW
Trigger: CCAAAGGAAGTAGCAGGCCCAGCTGGGGCCCCTCGG...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTGGCGCCATCCTCCGGTaGCTGTCCAGGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFGAILR*LSRWLH
Trigger: ATGCAGCCACCTGGACAGCCACCGGAGGATGGCGCC...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR CCA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGTCCTCCTCATCCCGATaGTCACCTGTGAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: TGSASQHVMSISVALERESSSSR*SPVRCR
Trigger: TCTACATCTCACAGGTGACCATCGGGATGAGGAGGA...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTAGGGCCCGCTCTATCTaGTCAGCGACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFRARSI*SATGVE
Trigger: CTCCACCCCTGTCGCTGAGCAGATAGAGCGGGCCCT...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTGGCAGTGGTGGAGGCTaGGAGGAGGTGACCTCATCC +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFGSGGG*EEVTSS
Trigger: GGATGAGGTCACCTCCTCGCAGCCTCCACCACTGCC...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTACAGGACAGCCTGCTCTaGAGACTCCATGAACATCAA +
Preference number: 4 (lower is better)
Translates to: SSGTGSASQHVMSISVALQDSLL*RLHEHQ
Trigger: TTGATGTTCATGGAGTCTGCAGAGCAGGCTGTCCTG...TAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR GCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAATCCGGCTCCTGCTCTTaGTCCAGCTCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQSGSCS*SSSSRA
Trigger: AGCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGA...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTCCGGCTCCTGCTCTTaGTCCAGCTCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTSGSCS*SSSSRA
Trigger: AGCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGA...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGAGGAGGGGTGGAATTTaGAACAGCGTCTCAACTACC +
Preference number: 4 (lower is better)
Translates to: KEGWNLQQRLNYQREESQRRGGI*NSVSTT
Trigger: GGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCT...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGAACCTGTTCCCATCTaGCAGCAGGGAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTEPVPI*QQGEEA
Trigger: GGCCTCCTCTCCCTGCTGGCAGATGGGAACAGGTTC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR GCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTGGGGTCCCTCAGACCTaGCCTCCTCTTTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLGVPQT*PPLCLS
Trigger: ACTGAGGCAAAGAGGAGGGCAGGTCTGAGGGACCCC...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR GCA 90 bp TGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGGGAAACAAGGATGCCTaGCTTGGGAACAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: WVCIPACDVDLCGVRKGEGNKDA*LGNKSR
Trigger: TCTGCTTTTGTTCCCAAGGCAGGCATCCTTGTTTCC...CTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAAGAGCCGCTGCCCGATaGCACCCGCGTCTATGTCTT +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQRAAAR*HPRLCL
Trigger: AAGACATAGACGCGGGTGCCATCGGGCAGCGGCTCT...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGTCCAGGTGGCTGCCTaGTCGATGGTTGAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTVQVAA*SMVEGR
Trigger: TCGCCCTTCAACCATCGACCAGGCAGCCACCTGGAC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAACCTCACTGTCTAGGATaGGGCTGGGCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQPHCLG*GWAPGS
Trigger: AGACCCAGGAGCCCAGCCCCATCCTAGACAGTGAGG...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTCATCGTGGATCTCCGTaGCGTCAGCTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTHRGSP*RQLWQA
Trigger: AGCCTGCCACAGCTGACGCCACGGAGATCCACGATG...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp ATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGGAGTTAGGGCAGTGGTGTCAGCAGTaGCAGTGTCAGTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: IPACDVDLCGVRKGEELGQWCQQ*QCQFQW
Trigger: CCATTGAAACTGACACTGCCACTGCTGACACCACTG...CCCTAACTCCTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTACAGCCTTCGCCTGCTaGCAGCAGTGGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFTAFAC*QQWLRS
Trigger: GCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGT...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCACAGAAGGTGGCTaGCGGCTCAGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQVTEGG*RLRQLI
Trigger: GATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGAC...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTCTGGGTCACAGAAGGTaGCTGGCGGCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFLGHRR*LAAQAA
Trigger: AGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAG...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTGGCCTAGGAACCAGATaGGCACCTTCCCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFGLGTR*APSPCL
Trigger: GAGGCAGGGGGAAGGTGCCCATCTGGTTCCTAGGCC...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCCATCCCTCCAGGCCTaGCTGCTGGCCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFPSLQA*LLASAA
Trigger: TGCAGCACTGGCCAGCAGCCAGGCCTGGAGGGATGG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR TCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCTGATGCTGCAAGCTTaGGGTCATCGGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSLMLQA*GHRSHL
Trigger: AAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTCAAGCCCCCTTCTCCTaGTGCTGCAAGCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTQAPFS*CCKLEV
Trigger: GACCTCAAGCTTGCAGCATCAGGAGAAGGGGGCTTG...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGACGTCTGGCCAGAGGCTaGTGCAGGTGGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGRLARG*CRWAAL
Trigger: CAAGGCCGCCCACCTGCATCAGCCTCTGGCCAGACG...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGGTGCCCACGGGCTCTaGGTTCTCATCCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFGAHGL*VLILSQ
Trigger: CTGCGAGAGGATGAGAACGCAGAGCCCGTGGGCACC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTGCGACTCTTTCCTGCTaGTTGAAGAACTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSATLSC*LKNSLG
Trigger: CCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGC...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGCCCGCAGAGGCCGATaGGACTCTTTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFARRGR*DSFLLL
Trigger: AAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGC...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTTTCAATGGTGTCAGCTaGATCGTGGATCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSFNGVS*IVDLRG
Trigger: GCCACGGAGATCCACGATGCAGCTGACACCATTGAA...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCACCGTACATCACCTTCTaGTTCTCAAAGTGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: EGWNLQQRLNYQREESQSPYITF*FSKCPE
Trigger: TTCGGGACACTTTGAGAACCAGAAGGTGATGTACGG...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGCCACCTTAGCCACGTaGCTGGCACAAGCGCACTTG +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFATLAT*LAQAHL
Trigger: CAAGTGCGCTTGTGCCAGCCACGTGGCTAAGGTGGC...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCCGTCTTCTGGTAGGTaGTGCCCACGGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFPSSGR*CPRALR
Trigger: ACGCAGAGCCCGTGGGCACCACCTACCAGAAGACGG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGAGGGGCTGCTGCTCTaGTCTCCTCACTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQEGLLL*SPHCLG
Trigger: TCCTAGACAGTGAGGAGACCAGAGCAGCAGCCCCTC...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTGTGTCAGCTGCATCGTaGATCTCCGTGGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLVSAAS*ISVASA
Trigger: AGCTGACGCCACGGAGATCCACGATGCAGCTGACAC...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCTAAGAGCTACAATCTaGACCAGGGAAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSLRATI*TREGGV
Trigger: CACCCCTCCTTCCCTGGTCCAGATTGTAGCTCTTAG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCAAGCCCCCTTCTCCTaGTGCTGCAAGCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFQAPFS*CCKLEV
Trigger: GACCTCAAGCTTGCAGCATCAGGAGAAGGGGGCTTG...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGCACCTCTGCCAGGGTaGCCTCAGTACCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGAPLPG*PQYPRV
Trigger: CACCCTCGGGTACTGAGGTCACCCTGGCAGAGGTGC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGGCACAAGCGCACTTaGGGGCATCAGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLWHKRT*GHQAHL
Trigger: AAGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCA...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGACGCAGCCGCAGTCGGTaGAGCACAGGGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGRSRSR*STGLES
Trigger: ACTCTCCAGCCCTGTGCTGCACCGACTGCGGCTGCG...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGCTGGGCAATAATAGCTaGTGCCTCCTCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKLGNNS*CLLHLR
Trigger: TCGGAGGTGGAGGAGGCAGCAGCTATTATTGCCCAG...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR GCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGGAATCCGGAGTGGGTaGCAGGCGGAGCTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGGIRSG*QAELLR
Trigger: TCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTAGAGCCGCTGCCCGATaGCACCCGCGTCTATGTCTT +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFRAAAR*HPRLCL
Trigger: AAGACATAGACGCGGGTGCCATCGGGCAGCGGCTCT...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCAGTGGTGTCAGCAGTaGCAGTGTCAGTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: CNSVSTTNERKASQLYKSQWCQQ*QCQFQW
Trigger: CCATTGAAACTGACACTGCCACTGCTGACACCACTG...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CGAAGGGATCTGGATTTCTTTATTAACAGACATGAGCACGACCCGTTACAGAAGTCCCCTCCTTCTGGGTaGTCTCGCCATTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: RRDLDFFINRHEHDPLQKSPPSG*SRHWLA
Trigger: TGCTAACCAATGGCGAGACCACCCAGAAGGAGGGGA...CTTCTGTAACGGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGCCCTCCTCCTCTTCTaGAACTGGGTCTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFALLLF*NWVCIP
Trigger: TGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGC...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTCCAGGGAAGGAGGGGTaGAATTTGCAACAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTPGKEG*NLQQRL
Trigger: GAGACGCTGTTGCAAATTCCACCCCTCCTTCCCTGG...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTCTGATGCTGCAAGCTTaGGGTCATCGGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLLMLQA*GHRSHL
Trigger: AAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAG...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCTTCCTTCTTGGCCTaGTCCCAGAACTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFSSFLA*SQNCSR
Trigger: CCGAGAGCAGTTCTGGGAGCAGGCCAAGAAGGAAGA...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGGCAGTGGTGGAGGCTaGGAGGAGGTGACCTCATCC +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGGSGGG*EEVTSS
Trigger: GGATGAGGTCACCTCCTCGCAGCCTCCACCACTGCC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGACAGCAGGGGCACCTCTaGCAGGGTGACCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGQQGHL*QGDLST
Trigger: GGTACTGAGGTCACCCTGGCAGAGGTGCCCCTGCTG...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTGCTCTTCTTCCTTCTTaGCCTGCTCCCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLALLPS*PAPRTA
Trigger: AGCAGTTCTGGGAGCAGGCCAAGAAGGAAGAAGAGC...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCTTGAAGAACTCCCTTaGGTTGTCAGGCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFLEELP*VVRPLG
Trigger: GCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGAGGGGCTGCTGCTCTaGTCTCCTCACTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFEGLLL*SPHCLG
Trigger: TCCTAGACAGTGAGGAGACCAGAGCAGCAGCCCCTC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGTGTCAGCTGCATCGTaGATCTCCGTGGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFVSAAS*ISVASA
Trigger: AGCTGACGCCACGGAGATCCACGATGCAGCTGACAC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGGGTGGTCTCGCCATTaGTTAGCAGGTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGGWSRH*LAGGAP
Trigger: CGGAGCCCCACCTGCTAACCAATGGCGAGACCACCC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCCCCTCCTTCTGGGTaGTCTCGCCATTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFSPPSG*SRHWLA
Trigger: TGCTAACCAATGGCGAGACCACCCAGAAGGAGGGGA...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAACAGAGCTCTTCCGATTaGGCAAACTCCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQQSSSD*ANSSSC
Trigger: ACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTG...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCAGGAGGCGGAGCCTTaGCACAGAGCTCTTCCGATT +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFQEAEP*HRALPI
Trigger: AATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTCTCCTCTTCTGGAACTaGGTCTGCATCCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTLLFWN*VCIPAC
Trigger: ACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGCCCTCCTCCTCTTCTaGAACTGGGTCTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFALLLF*NWVCIP
Trigger: TGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGC...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCCAGGGAAGGAGGGGTaGAATTTGCAACAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFPGKEG*NLQQRL
Trigger: GAGACGCTGTTGCAAATTCCACCCCTCCTTCCCTGG...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCAAAGAGGAAGGAGTTaGGGAGGGGCCACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFQRGRS*GGATKA
Trigger: GGCTTTGGTGGCCCCTCCCCAACTCCTTCCTCTTTG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR TCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCTGATGCTGCAAGCTTaGGGTCATCGGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFLMLQA*GHRSHL
Trigger: AAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAG...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTAAACTCCTCCTCCTGTaGTTGACTGAAGTACCCCTC +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTKLLLL*LTEVPL
Trigger: GAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTT...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTGTCCGATGCCTTTATaGAAGGGCAGTACGGACGAC +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFCPMPL*KGSTDD
Trigger: GTCGTCCGTACTGCCCTTTCATAAAGGCATCGGACA...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR GCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGCGACTCTTTCCTGCTaGTTGAAGAACTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFATLSC*LKNSLG
Trigger: CCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGC...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTACCTGCCCTCCTCTTTaGCTCAGTTTCCTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLTCPPL*LSFLKK
Trigger: CTTCTTGAGGAAACTGAGGCAAAGAGGAGGGCAGGT...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTGATGAGCACGTATTTTaGCAGAGCAGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLDEHVF*QSSLGV
Trigger: GACTCCCAAGCTGCTCTGCCAAAATACGTGCTCATC...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTCCTCCTCATCCCGATaGTCACCAAAGATAGACTGC +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTSSSSR*SPKIDC
Trigger: GCAGTCTATCTTTGGTGACCATCGGGATGAGGAGGA...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCAGAGCTCTTCCGATTaGGCAAACTCCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFQSSSD*ANSSSC
Trigger: ACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTG...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTG +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFSSSCD*LKYPSL
Trigger: CAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGA...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAACTTCATTTCCACAGCTaGATCCGTCTTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQLHFHS*IRLLVG
Trigger: ACCTACCAGAAGACGGATGCAGCTGTGGAAATGAAG...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTCACCAAAGATAGACTaGTCCTTCAACCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLSPKID*SFNRLL
Trigger: CAAGAGGCGGTTGAAGGAGCAGTCTATCTTTGGTGA...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGATGCGACTCTTTCCTaGTGCTTGAAGAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTDATLS*CLKNSL
Trigger: AAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTCAGGACAGCCTGCTCTaGAGACTCCATGAACATCAA +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFQDSLL*RLHEHQ
Trigger: TTGATGTTCATGGAGTCTGCAGAGCAGGCTGTCCTG...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTGATGAGCACGTATTTTaGCAGAGCAGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: STTNERKASQLYKSPINFDEHVF*QSSLGV
Trigger: GACTCCCAAGCTGCTCTGCCAAAATACGTGCTCATC...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTATCACGTCGACACCCTaGAAGAACTCCGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFITSTP*KNSATL
Trigger: TAAGGTGGCGGAGTTCTTCCAGGGTGTCGACGTGAT...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCCTTCAACCGCCTCTTaGCCTCTTCCGCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFPSTAS*PLPLLK
Trigger: CTTTAGAAGCGGAAGAGGCCAAGAGGCGGTTGAAGG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGGACGACCTGGTCGATaGTTGAAGGGCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGGRPGR*LKGEGT
Trigger: TGTACCCTCGCCCTTCAACCATCGACCAGGTCGTCC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR TCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGACTCCACCTCCGACTCTaGCTTCTTCATGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGLHLRL*LLHVGL
Trigger: GAGACCCACATGAAGAAGTCAGAGTCGGAGGTGGAG...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGATGGCACAAGCGCACTTaGGGGCATCAGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGWHKRT*GHQAHL
Trigger: AAGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCA...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCTTCATTTCCACAGCTaGATCCGTCTTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFLHFHS*IRLLVG
Trigger: ACCTACCAGAAGACGGATGCAGCTGTGGAAATGAAG...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGATCCCCTCCTTCTGGGTaGTCTCGCCATTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGSPPSG*SRHWLA
Trigger: TGCTAACCAATGGCGAGACCACCCAGAAGGAGGGGA...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGCAGCTCATCAAAGTTaGGAAGGGTGGCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGAAHQS*EGWHSL
Trigger: AAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR TCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTCGTGCAAAATATCTaGAGCCCTGGACAGAGAATA +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLFVQNI*SPGQRI
Trigger: TATTCTCTGTCCAGGGCTTCAGATATTTTGCACGAA...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGCTCTTCTTCCTTCTTaGCCTGCTCCCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGALLPS*PAPRTA
Trigger: AGCAGTTCTGGGAGCAGGCCAAGAAGGAAGAAGAGC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTGTGATGTCGATCTCTaGAGGCTTGTTGTAGAACAC +
Preference number: 4 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFCDVDL*RLVVEH
Trigger: GTGTTCTACAACAAGCCTCCAGAGATCGACATCACA...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGACTAAGAGCTACAATCTaGACCAGGGAAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGLRATI*TREGGV
Trigger: CACCCCTCCTTCCCTGGTCCAGATTGTAGCTCTTAG...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CCA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTTGTGATGTCGATCTCTaGAGGCTTGTTGTAGAACAC +
Preference number: 4 (lower is better)
Translates to: NYQREESQSTVQVSYQLFCDVDL*RLVVEH
Trigger: GTGTTCTACAACAAGCCTCCAGAGATCGACATCACA...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAACCACGAGCCATTTATTaGCATGTTTTAAAATTCGTG +
Preference number: 4 (lower is better)
Translates to: NLQQRLNYQREESQSTVQPRAIY*HVLKFV
Trigger: CACGAATTTTAAAACATGGCAATAAATGGCTCGTGG...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR GCA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTCCACGAGCCATTTATTaGCATGTTTTAAAATTCGTG +
Preference number: 4 (lower is better)
Translates to: LNYQREESQSTVQVSYQLPRAIY*HVLKFV
Trigger: CACGAATTTTAAAACATGGCAATAAATGGCTCGTGG...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS GCA 90 bp GGCCCCCAGCCCGCTCCGCTCCTCCCCCGCCCTCGCTTTCCTTTGTaGTGTGGCCGGGCCGGGCTGAGCCGGGCAGGCTGCGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GPQPAPLLPRPRFPL*CGRAGLSRAGCAGS
Trigger: GGAGCCAGCGCAGCCTGCCCGGCTCAGCCCGGCCCGGCCACAGCACAAAGGAAAGCGAGGGCGGGGGAGGAGCGGAGCGGGCTGGGGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS TCA 90 bp TCCTCCCCCGCCCTCGCTTTCCTTTGTGCTGTGGCCGGGCCGGGCTaGGCCGGGCAGGCTGCGCTGGCTCCGCTAGCTCGGTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: SSPALAFLCAVAGPG*AGQAALAPLARSPP
Trigger: GGGCGGGGACCGAGCTAGCGGAGCCAGCGCAGCCTGCCCGGCTCAGCCCGGCCCGGCCACAGCACAAAGGAAAGCGAGGGCGGGGGAGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CAA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGTGGCGAAGGTGCCCTaGGCCGCCCCGTGCACACCT +
Preference number: 5 (lower is better)
Translates to: GCQAELLRMQARRAVWPEVAKVP*AAPCTP
Trigger: AGGTGTGCACGGGGCGGCCAAGGGCACCTTCGCCAC...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS TCA 90 bp GTGGCTCCGGAGCCACCTCATCCAGCAGGGGCACCTCTGCCAGGGTaGCCTCAGTACCCGAGGGTGGCGTGGGGGCCCTGGGCTCACCCT +
Preference number: 5 (lower is better)
Translates to: VAPEPPHPAGAPLPG*PQYPRVAWGPWAHP
Trigger: AGGGTGAGCCCAGGGCCCCCACGCCACCCTCGGGTACTGAGGTCACCCTGGCAGAGGTGCCCCTGCTGGATGAGGTGGCTCCGGAGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS GCA 90 bp TGGCAGCAGTGGCTCCGGAGCCACCTCATCCAGCAGGGGCACCTCTaGCAGGGTGACCTCAGTACCCGAGGGTGGCGTGGGGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: WQQWLRSHLIQQGHL*QGDLSTRGWRGGPG
Trigger: CCCAGGGCCCCCACGCCACCCTCGGGTACTGAGGTCACCCTGGCAGAGGTGCCCCTGCTGGATGAGGTGGCTCCGGAGCCACTGCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS GCA 90 bp CATCCAGGGCCCGCTCTATCTGCTCAGCGACAGGGGTGGAGGCGGTaGTGGAGTCAGACGGGCTCCGCGTGGGGATGGGAGTGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: HPGPALSAQRQGWRR*WSQTGSAWGWEWAP
Trigger: TGGCGCCCACTCCCATCCCCACGCGGAGCCCGTCTGACTCCAGCACCGCCTCCACCCCTGTCGCTGAGCAGATAGAGCGGGCCCTGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS-3UTR CAA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTCCGGCTCCTGCTCTaGCTCCAGCTCCTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: EAAKSPARAGIRSGCQAELRLLL*LQLLKG
Trigger: GCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGAG...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS GCA 90 bp GTGCCCACGGGCTCTGCGTTCTCATCCTCTCGCAGCCGCAGTCGGTaGAGCACAGGGCTGGAGAGTCGCGCCAGCCCGTTAGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: VPTGSAFSSSRSRSR*STGLESRASPLESR
Trigger: GCGGCTCTCTAACGGGCTGGCGCGACTCTCCAGCCCTGTGCTGCACCGACTGCGGCTGCGAGAGGATGAGAACGCAGAGCCCGTGGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000471767.1
ENST00000472831.5
ENST00000477391.6
CDS CCA 90 bp TCCCTCCCACCAGGCAGTCCCTGCCGCACCTGGGTCCCCTCCTTCTaGGTGGTCTCGCCATTGGTTAGCAGGTGGGGCTCCGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SLPPGSPCRTWVPSF*VVSPLVSRWGSGSC
Trigger: GCAGGAGCCGGAGCCCCACCTGCTAACCAATGGCGAGACCACCCAGAAGGAGGGGACCCAGGTGCGGCAGGGACTGCCTGGTGGGAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CAA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGGCACAAGCGCACTaGCGGGCATCAGGCACATCT +
Preference number: 5 (lower is better)
Translates to: AAKSPARAGIRSGCQAELLAQAH*RASGTS
Trigger: AGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCAG...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGTGGGTGGTCTCGCCATaGGTTAGCAGGTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: EAAKSPARAGIRSGCQAEWVVSP*VSRWGS
Trigger: GGAGCCCCACCTGCTAACCAATGGCGAGACCACCCA...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGACAGGAGGCGGAGCCTaGGCACAGAGCTCTTCCGAT +
Preference number: 5 (lower is better)
Translates to: GCQAELLRMQARRAVWPETGGGA*AQSSSD
Trigger: ATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGT...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCGCAGCTTGGGAGTCCTaGACACTGCAGAAGCCGTAC +
Preference number: 5 (lower is better)
Translates to: RPSPQPGPESGVGARRSCAAWES*TLQKPY
Trigger: GTACGGCTTCTGCAGTGTCAAGGACTCCCAAGCTGC...GCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGGCACAAGCGCACTaGCGGGCATCAGGCACATCT +
Preference number: 5 (lower is better)
Translates to: EAAKSPARAGIRSGCQAELAQAH*RASGTS
Trigger: AGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCAG...CTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GGCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGAGGCCCCTTCCCCGTaGCCAGGCCATAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: GPVGREAAKSPARAGIRSEAPSP*PGHRSM
Trigger: CATTGACCTATGGCCTGGCAACGGGGAAGGGGCCTC...ACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCGACCTGGTCGATGGTaGAAGGGCGAGGGTACATCA +
Preference number: 5 (lower is better)
Translates to: RSGCQAELLRMQARRAVWRPGRW*KGEGTS
Trigger: TGATGTACCCTCGCCCTTCAACCATCGACCAGGTCG...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS GCA 90 bp TGCAGCACAGGGCTGGAGAGTCGCGCCAGCCCGTTAGAGAGCCGCTaGCCGATGGCACCCGCGTCTATGTCTTCCACGCTGCTGGCGTTC +
Preference number: 5 (lower is better)
Translates to: CSTGLESRASPLESR*PMAPASMSSTLLAF
Trigger: GAACGCCAGCAGCGTGGAAGACATAGACGCGGGTGCCATCGGGCAGCGGCTCTCTAACGGGCTGGCGCGACTCTCCAGCCCTGTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000506117.5
CDS-3UTR CAA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCTGATGCTGCAAGCTaGAGGTCATCGGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: RSGCQAELLRMQARRAVWPDAAS*RSSEPS
Trigger: AGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGG...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGCCTGATGCTGCAAGCTaGAGGTCATCGGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: VGARRSCCECRHGGPSGQPDAAS*RSSEPS
Trigger: AGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGG...CTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGAGCTCTTCTTCCTTCTaGGCCTGCTCCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: GCQAELLRMQARRAVWPESSSSF*ACSQNC
Trigger: GCAGTTCTGGGAGCAGGCCAAGAAGGAAGAAGAGCT...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGGGCAGCTCATCAAAGTaGAGAAGGGTGGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: RSGCQAELLRMQARRAVWGSSSK*RRVAQP
Trigger: AGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCC...CCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCGGCAGCTCATCAAAGTaGAGAAGGGTGGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: VPGGAAANAGTAGRLARGGSSSK*RRVAQP
Trigger: AGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCC...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGACAGAGCTCTTCCGATaGGGCAAACTCCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GCQAELLRMQARRAVWPETELFR*GKLLLL
Trigger: CAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGT...CTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS GCA 90 bp TGGCGTTCACGATCACGTCGACACCCTTCCGCAAGAAGACGGCAGTaGTCAGGCGGCACCATCCTCCCGCCATCCCCACCCCAGCACGCA +
Preference number: 5 (lower is better)
Translates to: WRSRSRRHPSARRRQ*SGGTILPPSPPQHA
Trigger: TGCGTGCTGGGGTGGGGATGGCGGGAGGATGGTGCCGCCTGAGCACTGCCGTCTTCTTGCGGAAGGGTGTCGACGTGATCGTGAACGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472831.5
CDS-3UTR CAA 90 bp TGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCGCAGCTTGGGAGTCCTaGACACTGCAGAAGCCGTAC +
Preference number: 5 (lower is better)
Translates to: WVGKRPSPQPGPESGVGAAAWES*TLQKPY
Trigger: GTACGGCTTCTGCAGTGTCAAGGACTCCCAAGCTGC...GGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGTCTTCGCCCACCCAGTaGATGAGCACGTATTTTGGC +
Preference number: 5 (lower is better)
Translates to: AAKSPARAGIRSGCQAELSSPTQ*MSTYFG
Trigger: GCCAAAATACGTGCTCATCAACTGGGTGGGCGAAGA...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS CCA 90 bp CTGCAGGACACGAGAGCTTGTCTCTCGCGTCCATCCCTCCAGGCCTaGCTGCTGGCCAGTGCTGCAGTACCATGCCATGGATGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LQDTRACLSRPSLQA*LLASAAVPCHGCPA
Trigger: GGCTGGGCATCCATGGCATGGTACTGCAGCACTGGCCAGCAGCCAGGCCTGGAGGGATGGACGCGAGAGACAAGCTCTCGTGTCCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS-3UTR CAA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGCCTGATGCTGCAAGCTaGAGGTCATCGGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVPDAAS*RSSEPS
Trigger: AGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGG...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATAGCTCTTCTTCCTTCTaGGCCTGCTCCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANSSSSF*ACSQNC
Trigger: GCAGTTCTGGGAGCAGGCCAAGAAGGAAGAAGAGCT...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGAAGAACTCCCTTGGGTaGTCAGGCCGCTGGGCAATA +
Preference number: 5 (lower is better)
Translates to: QGRNPEWVPGGAAANAGTKNSLG*SGRWAI
Trigger: TATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTT...CGTGCCTGCATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTCTGCCTGGTCGATGGTaGAAGGGCGAGGGTACATCA +
Preference number: 5 (lower is better)
Translates to: LWVGKRPSPQPGPESGVGLPGRW*KGEGTS
Trigger: TGATGTACCCTCGCCCTTCAACCATCGACCAGGCAG...ACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CAA 90 bp GCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGAAGGAGGGGTGGAATTaGCAACAGCGTCTCAACTAC +
Preference number: 5 (lower is better)
Translates to: AAKSPARAGIRSGCQAELKEGWN*QQRLNY
Trigger: GTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT...CAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS TCA 90 bp CTGGGTCACAGAAGGTGGCTGGCGGCTCAGGCAGCTCATCAAAGTTaGGAAGGGTGGCACAGCCTTCGCCTGCTGGCAGCAGTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LGHRRWLAAQAAHQS*EGWHSLRLLAAVAP
Trigger: CGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS GCA 90 bp CTCAGGCAGCTCATCAAAGTTGAGAAGGGTGGCACAGCCTTCGCCTaGTGGCAGCAGTGGCTCCGGAGCCACCTCATCCAGCAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LRQLIKVEKGGTAFA*WQQWLRSHLIQQGH
Trigger: GTGCCCCTGCTGGATGAGGTGGCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS CCA 90 bp AGAGCCGCTGCCCGATGGCACCCGCGTCTATGTCTTCCACGCTGCTaGCGTTCACGATCACGTCGACACCCTGGAAGAACTCCGCCACCT +
Preference number: 5 (lower is better)
Translates to: RAAARWHPRLCLPRC*RSRSRRHPGRTPPP
Trigger: AGGTGGCGGAGTTCTTCCAGGGTGTCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACATAGACGCGGGTGCCATCGGGCAGCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000477391.6
ENST00000506117.5
CDS CCA 90 bp AGGCAGCTCATCAAAGTTGAGAAGGGTGGCACAGCCTTCGCCTGCTaGCAGCAGTGGCTCCGGAGCCACCTCATCCAGCAGGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: RQLIKVEKGGTAFAC*QQWLRSHLIQQGHL
Trigger: GAGGTGCCCCTGCTGGATGAGGTGGCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS CCA 90 bp AGAGCCGCTGCCCGATGGCACCCGCGTCTATGTCTTCCACGCTGCTaGCGTTCACGATCACGTCGACACCCTTCCGCAAGAAGACGGCAG +
Preference number: 5 (lower is better)
Translates to: RAAARWHPRLCLPRC*RSRSRRHPSARRRQ
Trigger: CTGCCGTCTTCTTGCGGAAGGGTGTCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACATAGACGCGGGTGCCATCGGGCAGCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472831.5
CDS-3UTR CAA 90 bp GTCCCCAGCCAGGGCCGGAATCCGGAGTGGGTGCCAGGCGGAGCTGCTGCGAATTTTTGGCAGAGCAGCTaGGGAGTCCTTGACACTGCA +
Preference number: 5 (lower is better)
Translates to: VPSQGRNPEWVPGGAAANFWQSS*GVLDTA
Trigger: TGCAGTGTCAAGGACTCCCAAGCTGCTCTGCCAAAA...ATTCGCAGCAGCTCCGCCTGGCACCCACTCCGGATTCCGGCCCTGGCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGTTTTGGCAGAGCAGCTaGGGAGTCCTTGACACTGCA +
Preference number: 5 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVFWQSS*GVLDTA
Trigger: TGCAGTGTCAAGGACTCCCAAGCTGCTCTGCCAAAA...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GCCCTGTGGGTAGGGAAGCGGCCAAGTCCCCAGCCAGGGCCGGAATCCGGAGTGTCCTTCAACCGCCTCTaGGCCTCTTCCGCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: ALWVGKRPSPQPGPESGVSFNRL*ASSASK
Trigger: TTTAGAAGCGGAAGAGGCCAAGAGGCGGTTGAAGGA...CACTCCGGATTCCGGCCCTGGCTGGGGACTTGGCCGCTTCCCTACCCACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS GCA 90 bp TTGTCTCTCGCGTCCATCCCTCCAGGCCTGGCTGCTGGCCAGTGCTaGAGTACCATGCCATGGATGCCCAGCCATCTCATCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSLASIPPGLAAGQC*STMPWMPSHLILSS
Trigger: GGAGGAGAGGATGAGATGGCTGGGCATCCATGGCATGGTACTGCAGCACTGGCCAGCAGCCAGGCCTGGAGGGATGGACGCGAGAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS CCA 90 bp GAGGTTTGGGGTGCGGTGGCAGGTGATATAGGGAAAGGGAGTCCGTaGAGGGGAGGAGGAGGAAGAGGAGGAGGAGGAAGGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: EVWGAVAGDIGKGSP*RGGGGRGGGGRPTV
Trigger: GACAGTGGGCCTTCCTCCTCCTCCTCTTCCTCCTCCTCCCCTCCACGGACTCCCTTTCCCTATATCACCTGCCACCGCACCCCAAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS GCA 90 bp GGTGAGGCCAGCCCAAGCGGGGTCCCTCAGACCTGCCCTCCTCTTTaGCTCAGTTTCCTCAAGAAGAACCTGTTCCCATCTGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GEASPSGVPQTCPPL*LSFLKKNLFPSASR
Trigger: CCTGCTGGCAGATGGGAACAGGTTCTTCTTGAGGAAACTGAGGCAAAGAGGAGGGCAGGTCTGAGGGACCCCGCTTGGGCTGGCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS CCA 90 bp TTTCAATGGTGTCAGCTGCATCGTGGATCTCCGTGGCGTCAGCTGTaGCAGGCTCCACGGGAGCAGCCAGGACAGCCTGCTCTGCAGACT +
Preference number: 5 (lower is better)
Translates to: FQWCQLHRGSPWRQL*QAPREQPGQPALQT
Trigger: AGTCTGCAGAGCAGGCTGTCCTGGCTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CCA 90 bp TGGCAGTGTCAGTTTCAATGGTGTCAGCTGCATCGTGGATCTCCGTaGCGTCAGCTGTGGCAGGCTCCACGGGAGCAGCCAGGACAGCCT +
Preference number: 5 (lower is better)
Translates to: WQCQFQWCQLHRGSP*RQLWQAPREQPGQP
Trigger: AGGCTGTCCTGGCTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAACTGACACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CCA 90 bp GTGTCAGCAGTGGCAGTGTCAGTTTCAATGGTGTCAGCTGCATCGTaGATCTCCGTGGCGTCAGCTGTGGCAGGCTCCACGGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VSAVAVSVSMVSAAS*ISVASAVAGSTGAA
Trigger: GGCTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAACTGACACTGCCACTGCTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CCA 90 bp AGCCAGGGACTCCCCTTCCACTTCCTCTGGGTCACAGAAGGTGGCTaGCGGCTCAGGCAGCTCATCAAAGTTGAGAAGGGTGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: SQGLPFHFLWVTEGG*RLRQLIKVEKGGTA
Trigger: GGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAGAGGAAGTGGAAGGGGAGTCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS-3UTR CAA 90 bp AGAACACAGGAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCTCCGGCTCCTGCTCTaGCTCCAGCTCCTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: RTQEAEPWHRALPIGQTPLRLLL*LQLLKG
Trigger: GCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGAG...AGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CAA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGACAGGAGGCGGAGCCTaGGCACAGAGCTCTTCCGAT +
Preference number: 5 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVTGGGA*AQSSSD
Trigger: ATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGT...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS GCA 90 bp GAAGAACTCCCTTGGGTTGTCAGGCCGCTGGGCAATAATAGCTGCTaGCTCCTGAGGGCACGAGGAAAAGGTTGGGGCTGGGCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: EELPWVVRPLGNNSC*LLRARGKGWGWARQ
Trigger: TTGCCTGGCCCAGCCCCAACCTTTTCCTCGTGCCCTCAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467054.2
CDS GCA 90 bp CTTGAAGAACTCCCTTGGGTTGTCAGGCCGCTGGGCAATAATAGCTaGTGCCTCCTGAGGGCACGAGGAAAAGGTTGGGGCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LEELPWVVRPLGNNS*CLLRARGKGWGWAR
Trigger: CCTGGCCCAGCCCCAACCTTTTCCTCGTGCCCTCAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467054.2
CDS CCA 90 bp CTGGCGCCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTaGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LAPPLITTLEALLLF*NWVCIPACDVDLWR
Trigger: CCTCCAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGGCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS CCA 90 bp CTGGGCAATAATAGCTGCTGCCTCCTGAGGGCACGAGGAAAAGGTTaGGGCTGGGCCAGGCAAGCTGAGATAGCCCTGTCTGCCTCACCT +
Preference number: 5 (lower is better)
Translates to: LGNNSCCLLRARGKG*GWARQAEIALSASP
Trigger: AGGTGAGGCAGACAGGGCTATCTCAGCTTGCCTGGCCCAGCCCCAACCTTTTCCTCGTGCCCTCAGGAGGCAGCAGCTATTATTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467054.2
CDS-3UTR CAA 90 bp GTGCCAGGCGGAGCTGCTGCGAATGCAGGCACGGCGGGCCGTCTGGCCAGAGGCCCCACGAGCCATTTATaGCCATGTTTTAAAATTCGT +
Preference number: 5 (lower is better)
Translates to: VPGGAAANAGTAGRLARGPTSHL*PCFKIR
Trigger: ACGAATTTTAAAACATGGCAATAAATGGCTCGTGGG...GCCTCTGGCCAGACGGCCCGCCGTGCCTGCATTCGCAGCAGCTCCGCCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GAGGCGGAGCCTTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGAAAGCATCAGGTCACTaGGCCCCACCCAGCAGGACT +
Preference number: 5 (lower is better)
Translates to: EAEPWHRALPIGQTPPPVKASGH*APPSRT
Trigger: AGTCCTGCTGGGTGGGGCCAAGTGACCTGATGCTTT...CACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS GCA 90 bp GAGGGTACATCACAGCTGCCCGCAGAGGCCGATGCGACTCTTTCCTaGTGCTTGAAGAACTCCCTTGGGTTGTCAGGCCGCTGGGCAATA +
Preference number: 5 (lower is better)
Translates to: EGTSQLPAEADATLS*CLKNSLGLSGRWAI
Trigger: TATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGCAGCTGTGATGTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS GCA 90 bp AACAGTGGTGTCAGCAGTGGCAGTGTCAGTTTCAATGGTGTCAGCTaGATCGTGGATCTCCGTGGCGTCAGCTGTGGCAGGCTCCACGGG +
Preference number: 5 (lower is better)
Translates to: NSGVSSGSVSFNGVS*IVDLRGVSCGRLHG
Trigger: CCCGTGGAGCCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAACTGACACTGCCACTGCTGACACCACTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS GCA 90 bp GCAACCAATGATTCCATCAGTGGTTGCCAGGGAAACAAGGATGCCTaGCTTGGGAACAAAAGCAGAGCCGGCCCAGGGAGGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: ATNDSISGCQGNKDA*LGNKSRAGPGREGG
Trigger: CCCACCCTCCCTCCCTGGGCCGGCTCTGCTTTTGTTCCCAAGGCAGGCATCCTTGTTTCCCTGGCAACCACTGATGGAATCATTGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS CCA 90 bp CGCAGAGGCCGATGCGACTCTTTCCTGCTGCTTGAAGAACTCCCTTaGGTTGTCAGGCCGCTGGGCAATAATAGCTGCTGCCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RRGRCDSFLLLEELP*VVRPLGNNSCCLLH
Trigger: GTGGAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS CCA 90 bp CGCAGAGGCCGATGCGACTCTTTCCTGCTGCTTGAAGAACTCCCTTaGGTTGTCAGGCCGCTGGGCAATAATAGCTGCTGCCTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: RRGRCDSFLLLEELP*VVRPLGNNSCCLLR
Trigger: CCTCAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467054.2
CDS-3UTR CAA 90 bp AAAGAAGGGCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGTCCTTCAACCGCCTCTaGGCCTCTTCCGCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: KEGRGGGPREPEPTSHLLSFNRL*ASSASK
Trigger: TTTAGAAGCGGAAGAGGCCAAGAGGCGGTTGAAGGA...CAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGCCCTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CAA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCTGGGTGGTCTCGCCATaGGTTAGCAGGTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGWVVSP*VSRWGS
Trigger: GGAGCCCCACCTGCTAACCAATGGCGAGACCACCCA...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS TCA 90 bp TTGGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTGGCCTGGGTCCCCTCCTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LAQSSSDWANSSSCD*LKYPSLAWVPSFWV
Trigger: CACCCAGAAGGAGGGGACCCAGGCCAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS GCA 90 bp CTGCTCCCAGAACTGCTCTCGGTTAATCCGCTTCATTTCCACAGCTaGATCCGTCTTCTGGTAGGTGGTGCCCACGGGCTCTGCGTTCTC +
Preference number: 5 (lower is better)
Translates to: LLPELLSVNPLHFHS*IRLLVGGAHGLCVL
Trigger: GAGAACGCAGAGCCCGTGGGCACCACCTACCAGAAGACGGATGCAGCTGTGGAAATGAAGCGGATTAACCGAGAGCAGTTCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000471767.1
ENST00000472831.5
ENST00000477391.6
CDS GCA 90 bp ATGGTTGAAGGGCGAGGGTACATCACAGCTGCCCGCAGAGGCCGATaGGACTCTTTCCTGCTGCTTGAAGAACTCCCTTGGGTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: MVEGRGYITAARRGR*DSFLLLEELPWVVR
Trigger: CCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGCAGCTGTGATGTACCCTCGCCCTTCAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS GCA 90 bp AGGGGAGGAGGAGGAAGAGGAGGAGGAGGAAGGCCCACTGTCCGATaGCTTTATGAAAGGGCAGTACGGACGACCTGGTCGATGGTTGAA +
Preference number: 5 (lower is better)
Translates to: RGGGGRGGGGRPTVR*LYERAVRTTWSMVE
Trigger: TTCAACCATCGACCAGGTCGTCCGTACTGCCCTTTCATAAAGGCATCGGACAGTGGGCCTTCCTCCTCCTCCTCTTCCTCCTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS-3UTR CAA 90 bp TCCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGAGGCCCCTTCCCCGTaGCCAGGCCATAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: SSSSGTGSASQHVMSISVEAPSP*PGHRSM
Trigger: CATTGACCTATGGCCTGGCAACGGGGAAGGGGCCTC...CACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CAA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGCTCCGGCTCCTGCTCTaGCTCCAGCTCCTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: KEGWNLQQRLNYQREESQLRLLL*LQLLKG
Trigger: GCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGAG...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS TCA 90 bp CCTGTTGGAGGCTCAGCCTCAGAAGTCCAACATTCAACAAGGCTCTaGGATTCCTCCCCACCCTGGGGACACAGGGATGACTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PVGGSASEVQHSTRL*DSSPPWGHRDDWRK
Trigger: CTTCCTCCAGTCATCCCTGTGTCCCCAGGGTGGGGAGGAATCTCAGAGCCTTGTTGAATGTTGGACTTCTGAGGCTGAGCCTCCAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS GCA 90 bp GGTACATCACAGCTGCCCGCAGAGGCCGATGCGACTCTTTCCTGCTaGTTGAAGAACTCCCTTGGGTTGTCAGGCCGCTGGGCAATAATA +
Preference number: 5 (lower is better)
Translates to: GTSQLPAEADATLSC*LKNSLGLSGRWAII
Trigger: TATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGCAGCTGTGATGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS CCA 90 bp CGTTGTTGGCAACAGTGGTGTCAGCAGTGGCAGTGTCAGTTTCAATaGTGTCAGCTGCATCGTGGATCTCCGTGGCGTCAGCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RCWQQWCQQWQCQFQ*CQLHRGSPWRQLWQ
Trigger: CTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAACTGACACTGCCACTGCTGACACCACTGTTGCCAACAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CCA 90 bp CCACCGCTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAACTaGGTCTGCATCCCAGCATGTGATGTCGATCTCTGGAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: PPLITTLEALLLFWN*VCIPACDVDLWRLV
Trigger: AACAAGCCTCCAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS-3UTR CAA 90 bp GAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCATGGGTGGTCTCGCCATaGGTTAGCAGGTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: EGWNLQQRLNYQREESQSWVVSP*VSRWGS
Trigger: GGAGCCCCACCTGCTAACCAATGGCGAGACCACCCA...TGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS TCA 90 bp CGGCGAGGGAATGGCTGGAATTCCTACCTCCTGATGCTGCAAGCTTaGGGTCATCGGAGCCATCTTCATATGTGTACAGAGCCCAGTCGG +
Preference number: 5 (lower is better)
Translates to: RRGNGWNSYLLMLQA*GHRSHLHMCTEPSR
Trigger: CCGACTGGGCTCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGTAGGAATTCCAGCCATTCCCTCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS TCA 90 bp GGGGGTGGAGAAGGCGGCGAGGGAATGGCTGGAATTCCTACCTCCTaGTGCTGCAAGCTTGAGGTCATCGGAGCCATCTTCATATGTGTA +
Preference number: 5 (lower is better)
Translates to: GGGEGGEGMAGIPTS*CCKLEVIGAIFICV
Trigger: TACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGTAGGAATTCCAGCCATTCCCTCGCCGCCTTCTCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS GCA 90 bp AGGCCTGAGCCCGTTTCCCCAGCAACCAATGATTCCATCAGTGGTTaGCAGGGAAACAAGGATGCCTGCCTTGGGAACAAAAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: RPEPVSPATNDSISG*QGNKDACLGNKSRA
Trigger: GGCTCTGCTTTTGTTCCCAAGGCAGGCATCCTTGTTTCCCTGGCAACCACTGATGGAATCATTGGTTGCTGGGGAAACGGGCTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS CCA 90 bp ACTCTTTCCTGCTGCTTGAAGAACTCCCTTGGGTTGTCAGGCCGCTaGGCAATAATAGCTGCTGCCTCCTCCACCTCCGACTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: TLSCCLKNSLGLSGR*AIIAAASSTSDSDF
Trigger: GAAGTCAGAGTCGGAGGTGGAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS-3UTR CAA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCAAGAACTCCCTTGGGTaGTCAGGCCGCTGGGCAATA +
Preference number: 5 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGKNSLG*SGRWAI
Trigger: TATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTT...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CAA 90 bp ACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGCTGCCTGGTCGATGGTaGAAGGGCGAGGGTACATCA +
Preference number: 5 (lower is better)
Translates to: TGSASQHVMSISVALERELPGRW*KGEGTS
Trigger: TGATGTACCCTCGCCCTTCAACCATCGACCAGGCAG...CTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CAA 90 bp CTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGGCAGCTCATCAAAGTaGAGAAGGGTGGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: LLFWNWVCIPACDVDLCGGSSSK*RRVAQP
Trigger: AGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCC...GCCACAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CAA 90 bp TACTACCTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTGGCACAGAGCTACAAGGATGCCTGCCTaGGGAACAAAAGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: YYLEACCRTQEAEPWHRATRMPA*GTKAEP
Trigger: CGGCTCTGCTTTTGTTCCCAAGGCAGGCATCCTTGT...AGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS CCA 90 bp TGTCGATCTCTGGAGGCTTGTTGTAGAACACAGGAGGCGGAGCCTTaGCACAGAGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: CRSLEACCRTQEAEP*HRALPIGQTPPPVI
Trigger: AATCACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGAGATCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS-3UTR CAA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTTGGGTGGTCTCGCCATaGGTTAGCAGGTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: CNSVSTTNERKASQLYKSWVVSP*VSRWGS
Trigger: GGAGCCCCACCTGCTAACCAATGGCGAGACCACCCA...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp TGGGTCTGCATCCCAGCATGTGATGTCGATCTCTGTGGCGTTAGAAAGGGAGAGACAGAGCTCTTCCGATaGGGCAAACTCCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: WVCIPACDVDLCGVRKGETELFR*GKLLLL
Trigger: CAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGT...CTCTCCCTTTCTAACGCCACAGAGATCGACATCACATGCTGGGATGCAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS GCA 90 bp CTAATCACCACCCTCGAAGCCCTCCTCCTCTTCTGGAACTGGGTCTaGATCCCAGCATGTGATGTCGATCTCTGGAGGCTTGTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LITTLEALLLFWNWV*IPACDVDLWRLVVE
Trigger: TTCTACAACAAGCCTCCAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGGAGGGCTTCGAGGGTGGTGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS-3UTR CAA 90 bp AAGGAGGGGTGGAATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGAAGAACTCCCTTGGGTaGTCAGGCCGCTGGGCAATA +
Preference number: 5 (lower is better)
Translates to: KEGWNLQQRLNYQREESQKNSLG*SGRWAI
Trigger: TATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTT...CTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp GCGGGGAGGGGGTCCCAGGGAGCCAGAGCCCACGAGCCATTTATTGCCATGTTTCCCACGAGCCATTTATaGCCATGTTTTAAAATTCGT +
Preference number: 5 (lower is better)
Translates to: AGRGSQGARAHEPFIAMFPTSHL*PCFKIR
Trigger: ACGAATTTTAAAACATGGCAATAAATGGCTCGTGGG...AAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACCCCCTCCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CAA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTGCAGGACACGAGAGCTaGTCTCTCGCGTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: CNSVSTTNERKASQLYKSAGHES*SLASIP
Trigger: AGGGATGGACGCGAGAGACAAGCTCTCGTGTCCTGC...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS CCA 90 bp ATAATAGCTGCTGCCTCCTCCACCTCCGACTCTGACTTCTTCATGTaGGTCTCTTCCTCCTCATCCCGATGGTCACCAAAGATAGACTGC +
Preference number: 5 (lower is better)
Translates to: IIAAASSTSDSDFFM*VSSSSSRWSPKIDC
Trigger: GCAGTCTATCTTTGGTGACCATCGGGATGAGGAGGAAGAGACCCACATGAAGAAGTCAGAGTCGGAGGTGGAGGAGGCAGCAGCTATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
CDS CCA 90 bp ATAATAGCTGCTGCCTCCTCCACCTCCGACTCTGACTTCTTCATGTaGGTCTCTTCCTCCTCATCCCGATGGTCACCTGTGAGATGTAGA +
Preference number: 5 (lower is better)
Translates to: IIAAASSTSDSDFFM*VSSSSSRWSPVRCR
Trigger: TCTACATCTCACAGGTGACCATCGGGATGAGGAGGAAGAGACCCACATGAAGAAGTCAGAGTCGGAGGTGGAGGAGGCAGCAGCTATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS-3UTR CAA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGAGGCCCCTTCCCCGTaGCCAGGCCATAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTEAPSP*PGHRSM
Trigger: CATTGACCTATGGCCTGGCAACGGGGAAGGGGCCTC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTCTCCGGCTCCTGCTCTaGCTCCAGCTCCTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: STTNERKASQLYKSPINFLRLLL*LQLLKG
Trigger: GCCCTTGAGGAGCTGGAGCAAGAGCAGGAGCCGGAG...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AAAACAGTTACTAAACGTGAAAAAGGAACCCAAGCAAAGAGGAAGGAGTTGGGGGAGGCCCCTTCCCCGTaGCCAGGCCATAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: KTVTKREKGTQAKRKELGEAPSP*PGHRSM
Trigger: CATTGACCTATGGCCTGGCAACGGGGAAGGGGCCTC...CCCCAACTCCTTCCTCTTTGCTTGGGTTCCTTTTTCACGTTTAGTAACTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CAA 90 bp TGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTACAGAGCTCTTCCGATaGGGCAAACTCCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: CNSVSTTNERKASQLYKSTELFR*GKLLLL
Trigger: CAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGT...AGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTACAGGAGGCGGAGCCTaGGCACAGAGCTCTTCCGAT +
Preference number: 5 (lower is better)
Translates to: LNYQREESQSTVQVSYQLTGGGA*AQSSSD
Trigger: ATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGT...AAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS CCA 90 bp CAAAGTGTCCCAGCTGTGTGGCTTCAGATAAGTCACTTTCCCTGTTaGAGGCTCAGCCTCAGAAGTCCAACATTCAACAAGGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: QSVPAVWLQISHFPC*RLSLRSPTFNKALR
Trigger: TCTCAGAGCCTTGTTGAATGTTGGACTTCTGAGGCTGAGCCTCCAACAGGGAAAGTGACTTATCTGAAGCCACACAGCTGGGACACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS-3UTR CAA 90 bp TCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTCTGCCTGGTCGATGGTaGAAGGGCGAGGGTACATCA +
Preference number: 5 (lower is better)
Translates to: STTNERKASQLYKSPINFLPGRW*KGEGTS
Trigger: TGATGTACCCTCGCCCTTCAACCATCGACCAGGCAG...AAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292385.9
ENST00000309007.9
CDS-3UTR CAA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTGGCAGCTCATCAAAGTaGAGAAGGGTGGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTGSSSK*RRVAQP
Trigger: AGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCC...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTACAGGAGGCGGAGCCTaGGCACAGAGCTCTTCCGAT +
Preference number: 5 (lower is better)
Translates to: NYQREESQSTVQVSYQLFTGGGA*AQSSSD
Trigger: ATCGGAAGAGCTCTGTGCCAAGGCTCCGCCTCCTGT...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp TCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTCTTCGCCCACCCAGTaGATGAGCACGTATTTTGGC +
Preference number: 5 (lower is better)
Translates to: SQLPTRGKPVNCTSLLSTSSPTQ*MSTYFG
Trigger: GCCAAAATACGTGCTCATCAACTGGGTGGGCGAAGA...AGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AAAACAGTTACTAAACGTGAAAAAGGAACCCAAGCAAAGAGGAAGGAGTTGGGGAGCTCTTCTTCCTTCTaGGCCTGCTCCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: KTVTKREKGTQAKRKELGSSSSF*ACSQNC
Trigger: GCAGTTCTGGGAGCAGGCCAAGAAGGAAGAAGAGCT...CCCCAACTCCTTCCTCTTTGCTTGGGTTCCTTTTTCACGTTTAGTAACTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CAA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAATCCTTCAACCGCCTCTaGGCCTCTTCCGCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: NLQQRLNYQREESQSTVQSFNRL*ASSASK
Trigger: TTTAGAAGCGGAAGAGGCCAAGAGGCGGTTGAAGGA...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTAAGAACTCCCTTGGGTaGTCAGGCCGCTGGGCAATA +
Preference number: 5 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFKNSLG*SGRWAI
Trigger: TATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTT...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp CAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTTTTGGCAGAGCAGCTaGGGAGTCCTTGACACTGCA +
Preference number: 5 (lower is better)
Translates to: QLPTRGKPVNCTSLLSTFFWQSS*GVLDTA
Trigger: TGCAGTGTCAAGGACTCCCAAGCTGCTCTGCCAAAA...AAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTG
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGACTGGCACAAGCGCACTaGCGGGCATCAGGCACATCT +
Preference number: 5 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGLAQAH*RASGTS
Trigger: AGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCAG...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AATTTGCAACAGCGTCTCAACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAAAGGAGGGGTGGAATTaGCAACAGCGTCTCAACTAC +
Preference number: 5 (lower is better)
Translates to: NLQQRLNYQREESQSTVQKEGWN*QQRLNY
Trigger: GTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT...TTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTTGAGACGCTGTTGCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAGGCCTGCTACTTCCTTaGGGCCAGACAGGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGGLLLP*GQTGRG
Trigger: ACCCCTTCCTGTCTGGCCCAAAGGAAGTAGCAGGCC...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309007.9
CDS-3UTR CAA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAACAGAGCTCTTCCGATaGGGCAAACTCCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGTELFR*GKLLLL
Trigger: CAGGAGGAGGAGTTTGCCCAATCGGAAGAGCTCTGT...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AGCCCTGGACAGAGAATACAAAGTGATATTTTCCCAAGAAACATAAAACTAGGAAAGGAGGGGTGGAATTaGCAACAGCGTCTCAACTAC +
Preference number: 5 (lower is better)
Translates to: SPGQRIQSDIFPRNIKLGKEGWN*QQRLNY
Trigger: GTAGTTGAGACGCTGTTGCAAATTCCACCCCTCCTT...TCCTAGTTTTATGTTTCTTGGGAAAATATCACTTTGTATTCTCTGTCCAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS-3UTR CAA 90 bp AACTACCAACGAGAGGAAAGCCAGTCAACTGTACAAGTCTCCTATCAACTTTTTCCCACGAGCCATTTATaGCCATGTTTTAAAATTCGT +
Preference number: 5 (lower is better)
Translates to: NYQREESQSTVQVSYQLFPTSHL*PCFKIR
Trigger: ACGAATTTTAAAACATGGCAATAAATGGCTCGTGGG...AAAAAGTTGATAGGAGACTTGTACAGTTGACTGGCTTTCCTCTCGTTGGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
CDS GCA 72 bp CCTCCAGAAGCCCCCAGGTCAGAGTCCCCACCTGGCTaGCCTCCCAGTGTGCGGGTGAGGCCAGCCCAAGCG +
Preference number: 6 (lower is better)
Translates to: PPEAPRSESPPG*PPSVRVRPAQA
Trigger: CGCTTGGGCTGGCCTCACCCGCACACTGGGAGGGCAGCCAGGTGGGGACTCTGACCTGGGGGCTTCTGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292385.9
CDS CCA 72 bp AGGCGGTGCTGGAGTCAGACGGGCTCCGCGTGGGGATaGGAGTGGGCGCCATCCTCCGGTGGCTGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: RRCWSQTGSAWG*EWAPSSGGCPG
Trigger: ACCTGGACAGCCACCGGAGGATGGCGCCCACTCCCATCCCCACGCGGAGCCCGTCTGACTCCAGCACCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp GGGCTGGAGAGTCGCGCCAGCCCGTTAGAGAGCCGCTaGCCGATGGCACCCGCGTCTATGTCTTCCACGCTG +
Preference number: 6 (lower is better)
Translates to: GLESRASPLESR*PMAPASMSSTL
Trigger: CAGCGTGGAAGACATAGACGCGGGTGCCATCGGGCAGCGGCTCTCTAACGGGCTGGCGCGACTCTCCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000506117.5
CDS CCA 72 bp CTCCGCGTGGGGATGGGAGTGGGCGCCATCCTCCGGTaGCTGTCCAGGTGGCTGCCTGGTCGATGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: LRVGMGVGAILR*LSRWLPGRWLK
Trigger: CTTCAACCATCGACCAGGCAGCCACCTGGACAGCCACCGGAGGATGGCGCCCACTCCCATCCCCACGCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CCA 72 bp GCAGTCCCTGCCGCACCTGGGTCCCCTCCTTCTGGGTaGTCTCGCCATTGGTTAGCAGGTGGGGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: AVPAAPGSPPSG*SRHWLAGGAPA
Trigger: AGCCGGAGCCCCACCTGCTAACCAATGGCGAGACCACCCAGAAGGAGGGGACCCAGGTGCGGCAGGGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS GCA 72 bp GGCTCTGCGTTCTCATCCTCTCGCAGCCGCAGTCGGTaGAGCACAGGGCTGGAGAGTCGCGCCAGCCCGTTA +
Preference number: 6 (lower is better)
Translates to: GSAFSSSRSRSR*STGLESRASPL
Trigger: TAACGGGCTGGCGCGACTCTCCAGCCCTGTGCTGCACCGACTGCGGCTGCGAGAGGATGAGAACGCAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000471767.1
ENST00000472831.5
ENST00000477391.6
CDS GCA 72 bp AGCCTGCTCTGCAGACTCCATGAACATCAAGTCCTCTaGAGGGCTGCCTGGCCCCCGGGGAGGCGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: SLLCRLHEHQVL*RAAWPPGRRLC
Trigger: GCACAGGCGCCTCCCCGGGGGCCAGGCAGCCCTGCAGAGGACTTGATGTTCATGGAGTCTGCAGAGCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp CGATCACGTCGACACCCTTCCGCAAGAAGACGGCAGTaGTCAGGCGGCACCATCCTCCCGCCATCCCCACCC +
Preference number: 6 (lower is better)
Translates to: RSRRHPSARRRQ*SGGTILPPSPP
Trigger: GGGTGGGGATGGCGGGAGGATGGTGCCGCCTGAGCACTGCCGTCTTCTTGCGGAAGGGTGTCGACGTGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472831.5
CDS CCA 72 bp CTCCCATCCCTCCCACCAGGCAGTCCCTGCCGCACCTaGGTCCCCTCCTTCTGGGTGGTCTCGCCATTGGTT +
Preference number: 6 (lower is better)
Translates to: LPSLPPGSPCRT*VPSFWVVSPLV
Trigger: AACCAATGGCGAGACCACCCAGAAGGAGGGGACCCAGGTGCGGCAGGGACTGCCTGGTGGGAGGGATGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS GCA 72 bp TGCGAGGAGGTGACCTCATCCAGGGCCCGCTCTATCTaGTCAGCGACAGGGGTGGAGGCGGTGCTGGAGTCA +
Preference number: 6 (lower is better)
Translates to: CEEVTSSRARSI*SATGVEAVLES
Trigger: TGACTCCAGCACCGCCTCCACCCCTGTCGCTGAGCAGATAGAGCGGGCCCTGGATGAGGTCACCTCCTCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CCA 72 bp TGTCAGCTGCATCGTGGATCTCCGTGGCGTCAGCTGTaGCAGGCTCCACGGGAGCAGCCAGGACAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: CQLHRGSPWRQL*QAPREQPGQPA
Trigger: AGCAGGCTGTCCTGGCTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp GCTGCCCGATGGCACCCGCGTCTATGTCTTCCACGCTaGTGGCGTTCACGATCACGTCGACACCCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: AARWHPRLCLPR*WRSRSRRHPSA
Trigger: TGCGGAAGGGTGTCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACATAGACGCGGGTGCCATCGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472831.5
CDS CAA 72 bp TCCGCCACCTTAGCCACGTGGCTGGCACAAGCGCACTaGCGGGCATCAGGCACATCTTCGCCCACCCAGTTG +
Preference number: 6 (lower is better)
Translates to: SATLATWLAQAH*RASGTSSPTQL
Trigger: CAACTGGGTGGGCGAAGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCAGCCACGTGGCTAAGGTGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000506117.5
ENST00000514833.1
CDS CAA 90 bp TCTGGGTCACAGAAGGTGGCTGGCGGCTCAGGCAGCTCATCAAAGTaGAGAAGGGTGGCACAGCCTTCGCCTGCTGGCAGCAGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SGSQKVAGGSGSSSK*RRVAQPSPAGSSGS
Trigger: GGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp GCTGCCCGATGGCACCCGCGTCTATGTCTTCCACGCTaGTGGCGTTCACGATCACGTCGACACCCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: AARWHPRLCLPR*WRSRSRRHPGR
Trigger: TCTTCCAGGGTGTCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACATAGACGCGGGTGCCATCGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000477391.6
ENST00000506117.5
CDS GCA 72 bp CAGCTGCCCGCAGAGGCCGATGCGACTCTTTCCTGCTaGTTGAAGAACTCCCTTGGGTTGTCAGGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: QLPAEADATLSC*LKNSLGLSGRW
Trigger: CCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS CCA 72 bp GGTGCGGTGGCAGGTGATATAGGGAAAGGGAGTCCGTaGAGGGGAGGAGGAGGAAGAGGAGGAGGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GAVAGDIGKGSP*RGGGGRGGGGR
Trigger: CCTTCCTCCTCCTCCTCTTCCTCCTCCTCCCCTCCACGGACTCCCTTTCCCTATATCACCTGCCACCGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393565.5
CDS CCA 72 bp GCCCGATGGCACCCGCGTCTATGTCTTCCACGCTGCTaGCGTTCACGATCACGTCGACACCCTTCCGCAAGA +
Preference number: 6 (lower is better)
Translates to: ARWHPRLCLPRC*RSRSRRHPSAR
Trigger: TCTTGCGGAAGGGTGTCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACATAGACGCGGGTGCCATCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472831.5
CDS CAA 72 bp CAGAAGGTGGCTGGCGGCTCAGGCAGCTCATCAAAGTaGAGAAGGGTGGCACAGCCTTCGCCTGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: QKVAGGSGSSSK*RRVAQPSPAGS
Trigger: GCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCCTGAGCCGCCAGCCACCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS CAA 90 bp TGGAAGAACTCCGCCACCTTAGCCACGTGGCTGGCACAAGCGCACTaGCGGGCATCAGGCACATCTTCGCCCACCCAGTTGATGAGCACG +
Preference number: 6 (lower is better)
Translates to: WKNSATLATWLAQAH*RASGTSSPTQLMST
Trigger: CGTGCTCATCAACTGGGTGGGCGAAGATGTGCCTGATGCCCGCAAGTGCGCTTGTGCCAGCCACGTGGCTAAGGTGGCGGAGTTCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000506117.5
ENST00000514833.1
CDS TCA 72 bp AGAAGGTGGCTGGCGGCTCAGGCAGCTCATCAAAGTTaGGAAGGGTGGCACAGCCTTCGCCTGCTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: RRWLAAQAAHQS*EGWHSLRLLAA
Trigger: TGCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGATGAGCTGCCTGAGCCGCCAGCCACCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp TCACAGCTGCCCGCAGAGGCCGATGCGACTCTTTCCTaGTGCTTGAAGAACTCCCTTGGGTTGTCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: SQLPAEADATLS*CLKNSLGLSGR
Trigger: GCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGCAGCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS GCA 72 bp GGGCGAGGGTACATCACAGCTGCCCGCAGAGGCCGATaGGACTCTTTCCTGCTGCTTGAAGAACTCCCTTGG +
Preference number: 6 (lower is better)
Translates to: GRGYITAARRGR*DSFLLLEELPW
Trigger: CCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCGGGCAGCTGTGATGTACCCTCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS GCA 72 bp GCTGTGGCAGGCTCCACGGGAGCAGCCAGGACAGCCTaGTCTGCAGACTCCATGAACATCAAGTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: AVAGSTGAARTA*SADSMNIKSSA
Trigger: TGCAGAGGACTTGATGTTCATGGAGTCTGCAGAGCAGGCTGTCCTGGCTGCTCCCGTGGAGCCTGCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp CTCATCAAAGTTGAGAAGGGTGGCACAGCCTTCGCCTaGTGGCAGCAGTGGCTCCGGAGCCACCTCATCCAG +
Preference number: 6 (lower is better)
Translates to: LIKVEKGGTAFA*WQQWLRSHLIQ
Trigger: CTGGATGAGGTGGCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp CCTTGGGTTGTCAGGCCGCTGGGCAATAATAGCTGCTaGCTCCTGAGGGCACGAGGAAAAGGTTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PWVVRPLGNNSC*LLRARGKGWGW
Trigger: CCAGCCCCAACCTTTTCCTCGTGCCCTCAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467054.2
CDS GCA 72 bp CTCCCTTGGGTTGTCAGGCCGCTGGGCAATAATAGCTaGTGCCTCCTGAGGGCACGAGGAAAAGGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: LPWVVRPLGNNS*CLLRARGKGWG
Trigger: GCCCCAACCTTTTCCTCGTGCCCTCAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467054.2
CDS CCA 72 bp GCCCGATGGCACCCGCGTCTATGTCTTCCACGCTGCTaGCGTTCACGATCACGTCGACACCCTGGAAGAACT +
Preference number: 6 (lower is better)
Translates to: ARWHPRLCLPRC*RSRSRRHPGRT
Trigger: AGTTCTTCCAGGGTGTCGACGTGATCGTGAACGCCAGCAGCGTGGAAGACATAGACGCGGGTGCCATCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000477391.6
ENST00000506117.5
CDS CCA 72 bp CAGTTTCAATGGTGTCAGCTGCATCGTGGATCTCCGTaGCGTCAGCTGTGGCAGGCTCCACGGGAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: QFQWCQLHRGSP*RQLWQAPREQP
Trigger: TGGCTGCTCCCGTGGAGCCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CCA 72 bp ATCAAAGTTGAGAAGGGTGGCACAGCCTTCGCCTGCTaGCAGCAGTGGCTCCGGAGCCACCTCATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: IKVEKGGTAFAC*QQWLRSHLIQQ
Trigger: CTGCTGGATGAGGTGGCTCCGGAGCCACTGCTGCCAGCAGGCGAAGGCTGTGCCACCCTTCTCAACTTTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000512501.1
CDS CAA 72 bp CCATCAGTGGTTGCCAGGGAAACAAGGATGCCTGCCTaGGGAACAAAAGCAGAGCCGGCCCAGGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: PSVVARETRMPA*GTKAEPAQGGR
Trigger: CCTCCCTCCCTGGGCCGGCTCTGCTTTTGTTCCCAAGGCAGGCATCCTTGTTTCCCTGGCAACCACTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS CCA 72 bp GTGGCAGTGTCAGTTTCAATGGTGTCAGCTGCATCGTaGATCTCCGTGGCGTCAGCTGTGGCAGGCTCCACG +
Preference number: 6 (lower is better)
Translates to: VAVSVSMVSAAS*ISVASAVAGST
Trigger: CGTGGAGCCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAACTGACACTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS CAA 90 bp GAGGCCGATGCGACTCTTTCCTGCTGCTTGAAGAACTCCCTTGGGTaGTCAGGCCGCTGGGCAATAATAGCTGCTGCCTCCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: EADATLSCCLKNSLG*SGRWAIIAAASSTS
Trigger: GGAGGTGGAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS CAA 90 bp CCAATGATTCCATCAGTGGTTGCCAGGGAAACAAGGATGCCTGCCTaGGGAACAAAAGCAGAGCCGGCCCAGGGAGGGAGGGTGGGATGG +
Preference number: 6 (lower is better)
Translates to: PMIPSVVARETRMPA*GTKAEPAQGGRVGW
Trigger: CCATCCCACCCTCCCTCCCTGGGCCGGCTCTGCTTTTGTTCCCAAGGCAGGCATCCTTGTTTCCCTGGCAACCACTGATGGAATCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS TCA 72 bp AGCTCTTCCGATTGGGCAAACTCCTCCTCCTGTGATTaGCTGAAGTACCCCTCACTGGCCTGGGTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSDWANSSSCD*LKYPSLAWVPS
Trigger: GGAGGGGACCCAGGCCAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTTGCCCAATCGGAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS GCA 72 bp GTCAGCAGTGGCAGTGTCAGTTTCAATGGTGTCAGCTaGATCGTGGATCTCCGTGGCGTCAGCTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: VSSGSVSFNGVS*IVDLRGVSCGR
Trigger: CCTGCCACAGCTGACGCCACGGAGATCCACGATGCAGCTGACACCATTGAAACTGACACTGCCACTGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000512501.1
CDS GCA 72 bp GATTCCATCAGTGGTTGCCAGGGAAACAAGGATGCCTaGCTTGGGAACAAAAGCAGAGCCGGCCCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: DSISGCQGNKDA*LGNKSRAGPGR
Trigger: CCTCCCTGGGCCGGCTCTGCTTTTGTTCCCAAGGCAGGCATCCTTGTTTCCCTGGCAACCACTGATGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS CCA 72 bp TGCTGCTTGAAGAACTCCCTTGGGTTGTCAGGCCGCTaGGCAATAATAGCTGCTGCCTCCTCCACCTCCGAC +
Preference number: 6 (lower is better)
Translates to: CCLKNSLGLSGR*AIIAAASSTSD
Trigger: GTCGGAGGTGGAGGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS TCA 72 bp CTTCCGATTGGGCAAACTCCTCCTCCTGTGATTGACTaGAGTACCCCTCACTGGCCTGGGTCCCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LPIGQTPPPVID*STPHWPGSPPS
Trigger: AGAAGGAGGGGACCCAGGCCAGTGAGGGGTACTTCAGTCAATCACAGGAGGAGGAGTTTGCCCAATCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS TCA 72 bp GAAGGCGGCGAGGGAATGGCTGGAATTCCTACCTCCTaGTGCTGCAAGCTTGAGGTCATCGGAGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: EGGEGMAGIPTS*CCKLEVIGAIF
Trigger: GAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGTAGGAATTCCAGCCATTCCCTCGCCGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS TCA 72 bp GGCTCAGCCTCAGAAGTCCAACATTCAACAAGGCTCTaGGATTCCTCCCCACCCTGGGGACACAGGGATGAC +
Preference number: 6 (lower is better)
Translates to: GSASEVQHSTRL*DSSPPWGHRDD
Trigger: GTCATCCCTGTGTCCCCAGGGTGGGGAGGAATCTCAGAGCCTTGTTGAATGTTGGACTTCTGAGGCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS GCA 72 bp GAACTGCTCTCGGTTAATCCGCTTCATTTCCACAGCTaGATCCGTCTTCTGGTAGGTGGTGCCCACGGGCTC +
Preference number: 6 (lower is better)
Translates to: ELLSVNPLHFHS*IRLLVGGAHGL
Trigger: GAGCCCGTGGGCACCACCTACCAGAAGACGGATGCAGCTGTGGAAATGAAGCGGATTAACCGAGAGCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000471767.1
ENST00000472831.5
ENST00000477391.6
CDS CAA 72 bp GCGACTCTTTCCTGCTGCTTGAAGAACTCCCTTGGGTaGTCAGGCCGCTGGGCAATAATAGCTGCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: ATLSCCLKNSLG*SGRWAIIAAAS
Trigger: GGAGGCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS CAA 90 bp GCGGCGAGGGAATGGCTGGAATTCCTACCTCCTGATGCTGCAAGCTaGAGGTCATCGGAGCCATCTTCATATGTGTACAGAGCCCAGTCG +
Preference number: 6 (lower is better)
Translates to: AAREWLEFLPPDAAS*RSSEPSSYVYRAQS
Trigger: CGACTGGGCTCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGTAGGAATTCCAGCCATTCCCTCGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS CCA 72 bp CGATGCGACTCTTTCCTGCTGCTTGAAGAACTCCCTTaGGTTGTCAGGCCGCTGGGCAATAATAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RCDSFLLLEELP*VVRPLGNNSCC
Trigger: GCAGCAGCTATTATTGCCCAGCGGCCTGACAACCCAAGGGAGTTCTTCAAGCAGCAGGAAAGAGTCGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000467054.2
ENST00000472831.5
ENST00000477391.6
ENST00000512501.1
CDS TCA 72 bp GCTCCTGCAAGCCCCCTTCTCCTGATGCTGCAAGCTTaGGGTCATCGGAGCCATCTTCATATGTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: APASPLLLMLQA*GHRSHLHMCTE
Trigger: CTCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGAAGGGGGCTTGCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000506117.5
ENST00000514833.1
CDS TCA 72 bp CCTCCTCTTCTGGAACTGGGTCTGCATCCCAGCATGTaGTGTCGATCTCTGGAGGCTTGTTGTAGAACACAG +
Preference number: 6 (lower is better)
Translates to: PPLLELGLHPSM*CRSLEACCRTQ
Trigger: CTGTGTTCTACAACAAGCCTCCAGAGATCGACATCACATGCTGGGATGCAGACCCAGTTCCAGAAGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
CDS TCA 72 bp AAAGCTCCTGCAAGCCCCCTCCTGATGCTGCAAGCTTaGGGTCATCGGAGCCATCTTCATATGTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: KAPASPLLMLQA*GHRSHLHMCTE
Trigger: CTCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGGGGCTTGCAGGAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477391.6
CDS GCA 72 bp CCCGTTTCCCCAGCAACCAATGATTCCATCAGTGGTTaGCAGGGAAACAAGGATGCCTGCCTTGGGAACAAA +
Preference number: 6 (lower is better)
Translates to: PVSPATNDSISG*QGNKDACLGNK
Trigger: TTTGTTCCCAAGGCAGGCATCCTTGTTTCCCTGGCAACCACTGATGGAATCATTGGTTGCTGGGGAAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512501.1
CDS CAA 72 bp AGCTCCTGCAAGCCCCCTTCTCCTGATGCTGCAAGCTaGAGGTCATCGGAGCCATCTTCATATGTGTACAGA +
Preference number: 6 (lower is better)
Translates to: SSCKPPSPDAAS*RSSEPSSYVYR
Trigger: TCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGAAGGGGGCTTGCAGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292385.9
ENST00000309007.9
ENST00000393565.5
ENST00000472831.5
ENST00000506117.5
ENST00000514833.1
CDS CAA 72 bp GAAAGCTCCTGCAAGCCCCCTCCTGATGCTGCAAGCTaGAGGTCATCGGAGCCATCTTCATATGTGTACAGA +
Preference number: 6 (lower is better)
Translates to: ESSCKPPPDAAS*RSSEPSSYVYR
Trigger: TCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGGGGCTTGCAGGAGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477391.6
CDS CAA 90 bp CCAAAGTGTCCCAGCTGTGTGGCTTCAGATAAGTCACTTTCCCTGTaGGAGGCTCAGCCTCAGAAGTCCAACATTCAACAAGGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: PKCPSCVASDKSLSL*EAQPQKSNIQQGSE
Trigger: CTCAGAGCCTTGTTGAATGTTGGACTTCTGAGGCTGAGCCTCCAACAGGGAAAGTGACTTATCTGAAGCCACACAGCTGGGACACTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS TCA 72 bp AATGGCTGGAATTCCTACCTCCTGATGCTGCAAGCTTaGGGTCATCGGAGCCATCTTCATATGTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: NGWNSYLLMLQA*GHRSHLHMCTE
Trigger: CTCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGTAGGAATTCCAGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505550.1
CDS CAA 72 bp GAATGGCTGGAATTCCTACCTCCTGATGCTGCAAGCTaGAGGTCATCGGAGCCATCTTCATATGTGTACAGA +
Preference number: 6 (lower is better)
Translates to: EWLEFLPPDAAS*RSSEPSSYVYR
Trigger: TCTGTACACATATGAAGATGGCTCCGATGACCTCAAGCTTGCAGCATCAGGAGGTAGGAATTCCAGCCATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505550.1