Pregenerated sensors for DBF4 (Homo sapiens)
Ensembl gene IDs: ENSG00000006634Ensembl transcript IDs: ENST00000265728.6, ENST00000413643.5, ENST00000430279.5, ENST00000431138.5, ENST00000495067.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATAATCTAATTACTCAGCACCAAAATACTAGCATGGTCCACCAGTaGCCCTCAAGTGTCAATATTTCTGATGATTTCCAGAATTCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: HNLITQHQNTSMVHQ*PSSVNISDDFQNSS Trigger: GCTTGAATTCTGGAAATCATCAGAAATATTGACACTTGAGGGTCACTGGTGGACCATGCTAGTATTTTGGTGCTGAGTAATTAGATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| 3UTR-3UTR CCA 90 bp | GTAGTCTTACTCCTACAAGAACATACTCAAAGGCAAATGCCTTATATCCACAGATCTGGAGGGAGTAGCTaGGACTACAGGCGCATGCCG | + |
|
Preference number: 2 (lower is better) Translates to: VVLLLQEHTQRQMPYIHRSGGSS*DYRRMP Trigger: CGGCATGCGCCTGTAGTCCCAGCTACTCCCTCCAGA...TCTGTGGATATAAGGCATTTGCCTTTGAGTATGTTCTTGTAGGAGTAAGACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCCAGATCAAGGCAATCCTTGTATATATCCCAAAACTGTATCTATAATTCAGGGACTACAGGCGCATaGCGCCATGCCCAGCTAATT | + |
|
Preference number: 2 (lower is better) Translates to: SARSRQSLYISQNCIYNSGTTGA*RHAQLI Trigger: AATTAGCTGGGCATGGCGGCATGCGCCTGTAGTCCC...TGAATTATAGATACAGTTTTGGGATATATACAAGGATTGCCTTGATCTGGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCATGGCTTCCAGTTACCCCTATACATAATCTAATTACTCAGCACCAAAATAGCATGGTCCACCAGTaGCCCTCAAGTGTCAATATT | + |
|
Preference number: 2 (lower is better) Translates to: PSWLPVTPIHNLITQHQNSMVHQ*PSSVNI Trigger: AATATTGACACTTGAGGGTCACTGGTGGACCATGCT...ATTTTGGTGCTGAGTAATTAGATTATGTATAGGGGTAACTGGAAGCCATGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| 3UTR-3UTR GCA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATATACTGGTTACTCTGTaGAAAGTTTCTGTGTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDILVTL*KVSVLL Trigger: GAGCAACACAGAAACTTTGCACAGAGTAACCAGTAT...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| 3UTR-3UTR TCA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATTGCTCACTTAGAAGGTaGGTTTCTAGATCTTCATAT | + |
|
Preference number: 2 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDCSLRR*VSRSSY Trigger: ATATGAAGATCTAGAAACTCACCTTCTAAGTGAGCA...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| 3UTR-3UTR TCA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATATATCATCAACAACTTaGTACTGGTTACTCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDISSTT*YWLLCA Trigger: TGCACAGAGTAACCAGTATCAAGTTGTTGATGATAT...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCCAGATCAAGGCAATCCTTGTATATATCCCAAAACTGTATCTATAATTCATTCCACTTGGTAGCCTaGTTAAGTCCTTCCTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: SARSRQSLYISQNCIYNSFHLVA*LSPSFM Trigger: CATGAAGGAAGGACTTAACCAGGCTACCAAGTGGAA...TGAATTATAGATACAGTTTTGGGATATATACAAGGATTGCCTTGATCTGGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| 3UTR CAA 90 bp | CTTCTCCAAATGCTTGTATCAGTAAGTGCCAGATCAAGGCAATCCTaGTATATATCCCAAAACTGTATCTATAATTCAATGCCATCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLQMLVSVSARSRQS*YISQNCIYNSMPSF Trigger: AAAGGATGGCATTGAATTATAGATACAGTTTTGGGATATATACAAGGATTGCCTTGATCTGGCACTTACTGATACAAGCATTTGGAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATAAATGGCCTATAAAGTaGGCTCATATCTTCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDKWPIK*AHIFHL Trigger: AAGGTGGAAGATATGAGCCAACTTTATAGGCCATTT...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431138.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATAATATCATCAACAACTaGATACTGGTTACTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDNIINN*ILVTLC Trigger: GCACAGAGTAACCAGTATCAAGTTGTTGATGATATT...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR GCA 90 bp | CACTTCCCAGGTTCAAGCAATTCTCAGCCTCTGGAGGGAGTAGCTGGGACTACAGGGACTACAGGCGCATaGCGCCATGCCCAGCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: HFPGSSNSQPLEGVAGTTGTTGA*RHAQLI Trigger: AATTAGCTGGGCATGGCGGCATGCGCCTGTAGTCCC...TGTAGTCCCAGCTACTCCCTCCAGAGGCTGAGAATTGCTTGAACCTGGGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | TTCCACTTGGTAGCCTGGTTAAGTCCTTCCTTCATGGCTTCCAGTTACCCCTATAGTGCTGGGATCCTGTaGCATGAGCCACAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FHLVAWLSPSFMASSYPYSAGIL*HEPQES Trigger: ACTCTCCTGTGGCTCATGCCACAGGATCCCAGCACT...ATAGGGGTAACTGGAAGCCATGAAGGAAGGACTTAACCAGGCTACCAAGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR TCA 90 bp | CACTTCCCAGGTTCAAGCAATTCTCAGCCTCTGGAGGGAGTAGCTGGGACTACATGCAATAGAACCAATTaGATGTCACTGGTGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HFPGSSNSQPLEGVAGTTCNRTN*MSLVVV Trigger: GACTACCACCAGTGACATTCAATTGGTTCTATTGCA...TGTAGTCCCAGCTACTCCCTCCAGAGGCTGAGAATTGCTTGAACCTGGGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR GCA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCCGCCTCCATTCCGTTaGTCTCTCAGTCTCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDPPPFR*SLSLRP Trigger: GGGTCTGAGACTGAGAGAGCAACGGAATGGAGGCGG...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTCGCCGCTTCAGGTCTTaGCGCAGCCTCAGAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLRRFRS*RSLREL Trigger: CAACTCTCTGAGGCTGCGCCAAGACCTGAAGCGGCG...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTTCTCGCGCCTCGCTCTaGCCCTGCAGGTTGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLSRASL*PCRLCF Trigger: GAAACACAACCTGCAGGGCCAGAGCGAGGCGCGAGA...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR TCA 90 bp | TCACTGGTGGTAGTCTTACTCCTACAAGAACATACTCAAAGGCAAATGCCTTATTGGGATCCTGTGGCATaGGCCACAGGAGAGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLVVVLLLQEHTQRQMPYWDPVA*ATGEST Trigger: AGTTGACTCTCCTGTGGCTCATGCCACAGGATCCCA...ATAAGGCATTTGCCTTTGAGTATGTTCTTGTAGGAGTAAGACTACCACCAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | TTCCACTTGGTAGCCTGGTTAAGTCCTTCCTTCATGGCTTCCAGTTACCCCTATACTTGGATTCCACCCTaGAAATGTCCTTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHLVAWLSPSFMASSYPYTWIPP*KCPLLW Trigger: CCACAGTAAAGGACATTTCCAGGGTGGAATCCAAGT...ATAGGGGTAACTGGAAGCCATGAAGGAAGGACTTAACCAGGCTACCAAGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | TTCCACTTGGTAGCCTGGTTAAGTCCTTCCTTCATGGCTTCCAGTTACCCCTATACCAAAATACTAGCATaGTCCACCAGTGACCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FHLVAWLSPSFMASSYPYTKILA*STSDPQ Trigger: TTGAGGGTCACTGGTGGACCATGCTAGTATTTTGGT...ATAGGGGTAACTGGAAGCCATGAAGGAAGGACTTAACCAGGCTACCAAGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAATGTATAATGCTAAGTTTGATATTCCCCAAATTGCACTTCACTGGTGGTTCTGGAGGGAGTAGCTaGGACTACAGGCGCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKCIMLSLIFPKLHFTGGSGGSS*DYRRMP Trigger: CGGCATGCGCCTGTAGTCCCAGCTACTCCCTCCAGA...ACCACCAGTGAAGTGCAATTTGGGGAATATCAAACTTAGCATTATACATTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR TCA 90 bp | TTACTCAGCACCAAAATACTAGCATGGTCCACCAGTGACCCTCAAGTGTCAATAAGCATGGTCCACCAGTaGCCCTCAAGTGTCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LLSTKILAWSTSDPQVSISMVHQ*PSSVNI Trigger: AATATTGACACTTGAGGGTCACTGGTGGACCATGCT...TATTGACACTTGAGGGTCACTGGTGGACCATGCTAGTATTTTGGTGCTGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | TTCCACTTGGTAGCCTGGTTAAGTCCTTCCTTCATGGCTTCCAGTTACCCCTATATTGCACTTCACTGGTaGTTTTCAGTGACAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FHLVAWLSPSFMASSYPYIALHW*FSVTKQ Trigger: TTGCTTTGTCACTGAAAACCACCAGTGAAGTGCAAT...ATAGGGGTAACTGGAAGCCATGAAGGAAGGACTTAACCAGGCTACCAAGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | CTTGATACTGGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGACTTGGATTCCACCCTaGAAATGTCCTTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDTGYSVQSFCVAHLEGETWIPP*KCPLLW Trigger: CCACAGTAAAGGACATTTCCAGGGTGGAATCCAAGT...CTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACCAGTATCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR GCA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCACTACCAACTCTTTTaGCCCCATCTCTTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDHYQLF*PHLLLK Trigger: CTTCAGTAAGAGATGGGGGCAAAAGAGTTGGTAGTG...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR CCA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATACTTGGATTCCACCCTaGAAATGTCCTTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDTWIPP*KCPLLW Trigger: CCACAGTAAAGGACATTTCCAGGGTGGAATCCAAGT...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTTGGACTGCAGGGCTTTaGCTCATATCTTCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLWTAGL*LISSTF Trigger: AAAGGTGGAAGATATGAGCCAAAGCCCTGCAGTCCA...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR TCA 90 bp | TTACTCAGCACCAAAATACTAGCATGGTCCACCAGTGACCCTCAAGTGTCAATATGCTCACTTAGAAGGTaGGTTTCTAGATCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSTKILAWSTSDPQVSICSLRR*VSRSSY Trigger: ATATGAAGATCTAGAAACTCACCTTCTAAGTGAGCA...TATTGACACTTGAGGGTCACTGGTGGACCATGCTAGTATTTTGGTGCTGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR GCA 90 bp | CCTTCATGGCTTCCAGTTACCCCTATACATAATCTAATTACTCAGCACCAAAATCACTACCAACTCTTTTaGCCCCATCTCTTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSWLPVTPIHNLITQHQNHYQLF*PHLLLK Trigger: CTTCAGTAAGAGATGGGGGCAAAAGAGTTGGTAGTG...ATTTTGGTGCTGAGTAATTAGATTATGTATAGGGGTAACTGGAAGCCATGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR GCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTCACTACCAACTCTTTTaGCCCCATCTCTTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLHYQLF*PHLLLK Trigger: CTTCAGTAAGAGATGGGGGCAAAAGAGTTGGTAGTG...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR GCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTCTACATCAAATGGACTaGAGGGCTTTGGCTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLLHQMD*RALAHI Trigger: GATATGAGCCAAAGCCCTGCAGTCCATTTGATGTAG...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTACTTGGATTCCACCCTaGAAATGTCCTTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLTWIPP*KCPLLW Trigger: CCACAGTAAAGGACATTTCCAGGGTGGAATCCAAGT...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR CCA 90 bp | GTAGTCTTACTCCTACAAGAACATACTCAAAGGCAAATGCCTTATATCCACAGATTCCACTTGGTAGCCTaGTTAAGTCCTTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VVLLLQEHTQRQMPYIHRFHLVA*LSPSFM Trigger: CATGAAGGAAGGACTTAACCAGGCTACCAAGTGGAA...TCTGTGGATATAAGGCATTTGCCTTTGAGTATGTTCTTGTAGGAGTAAGACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR TCA 90 bp | CTTGATACTGGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTGCTCACTTAGAAGGTaGGTTTCTAGATCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LDTGYSVQSFCVAHLEGECSLRR*VSRSSY Trigger: ATATGAAGATCTAGAAACTCACCTTCTAAGTGAGCA...CTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACCAGTATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR GCA 90 bp | GTAGTCTTACTCCTACAAGAACATACTCAAAGGCAAATGCCTTATATCCACAGAGCTTGTATCAGTAAGTaGCAGATCAAGGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVLLLQEHTQRQMPYIHRACISK*QIKAIL Trigger: AAGGATTGCCTTGATCTGGCACTTACTGATACAAGC...TCTGTGGATATAAGGCATTTGCCTTTGAGTATGTTCTTGTAGGAGTAAGACTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | TCACTGGTGGTAGTCTTACTCCTACAAGAACATACTCAAAGGCAAATGCCTTATGCCTACTTCAGGTACTaGTATGAAAAACAAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLVVVLLLQEHTQRQMPYAYFRY*YEKQRC Trigger: ACACCTTTGTTTTTCATACCAGTACCTGAAGTAGGC...ATAAGGCATTTGCCTTTGAGTATGTTCTTGTAGGAGTAAGACTACCACCAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR GCA 90 bp | GTAGTCTTACTCCTACAAGAACATACTCAAAGGCAAATGCCTTATATCCACAGAATACTGGTTACTCTGTaGAAAGTTTCTGTGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVLLLQEHTQRQMPYIHRILVTL*KVSVLL Trigger: GAGCAACACAGAAACTTTGCACAGAGTAACCAGTAT...TCTGTGGATATAAGGCATTTGCCTTTGAGTATGTTCTTGTAGGAGTAAGACTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR GCA 90 bp | GGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTACATCAAATGGACTaGAGGGCTTTTCTTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQSFCVAHLEGEFLDLHQMD*RAFLVF Trigger: AAAAACAAGAAAAGCCCTGCAGTCCATTTGATGTAG...ATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430279.5 |
||
| CDS-3UTR TCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTTGCTCACTTAGAAGGTaGGTTTCTAGATCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLCSLRR*VSRSSY Trigger: ATATGAAGATCTAGAAACTCACCTTCTAAGTGAGCA...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR TCA 90 bp | TCTTACTCCTACAAGAACATACTCAAAGGCAAATGCCTTATATCCACAGATTCAATATCATCAACAACTTaGTACTGGTTACTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSYKNILKGKCLISTDSISSTT*YWLLCA Trigger: TGCACAGAGTAACCAGTATCAAGTTGTTGATGATAT...TGAATCTGTGGATATAAGGCATTTGCCTTTGAGTATGTTCTTGTAGGAGTAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR TCA 90 bp | AGTGCCAGATCAAGGCAATCCTTGTATATATCCCAAAACTGTATCTATAATTCATGCAGGAAAAGCATATaGATTAGTCCTGTACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SARSRQSLYISQNCIYNSCRKSI*ISPVLR Trigger: TCTCAGTACAGGACTAATTCATATGCTTTTCCTGCA...TGAATTATAGATACAGTTTTGGGATATATACAAGGATTGCCTTGATCTGGCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR GCA 90 bp | CCTTCATGGCTTCCAGTTACCCCTATACATAATCTAATTACTCAGCACCAAAATATACTCAAAGGCAAATaGCTTATATCCACAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWLPVTPIHNLITQHQNILKGK*LISTDS Trigger: TGAATCTGTGGATATAAGGCATTTGCCTTTGAGTAT...ATTTTGGTGCTGAGTAATTAGATTATGTATAGGGGTAACTGGAAGCCATGAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CCA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTTTCTTCAACTCGATTTaGATTTTTCTGGCCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLFFNSI*IFLACY Trigger: ATAACAGGCCAGAAAAATCCAAATCGAGTTGAAGAA...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431138.5 |
||
| 3UTR CAA 72 bp | ATGCTTGTATCAGTAAGTGCCAGATCAAGGCAATCCTaGTATATATCCCAAAACTGTATCTATAATTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: MLVSVSARSRQS*YISQNCIYNSM Trigger: CATTGAATTATAGATACAGTTTTGGGATATATACAAGGATTGCCTTGATCTGGCACTTACTGATACAAGCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS GCA 90 bp | CCCGCCCCCTCACGCCGCCGTCCTTCTCGCGCCTCGCTCTGGCCCTaGAGGTTGTGTTTCCGCCTCTACCCCGCCTCCATTCCGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAPSRRRPSRASLWP*RLCFRLYPASIPLL Trigger: GAGCAACGGAATGGAGGCGGGGTAGAGGCGGAAACACAACCTGCAGGGCCAGAGCGAGGCGCGAGAAGGACGGCGGCGTGAGGGGGCGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS GCA 90 bp | GGCCCTGCAGGTTGTGTTTCCGCCTCTACCCCGCCTCCATTCCGTTaGTCTCTCAGTCTCAGACCCGGGCTCTCGGTCCGCCGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPAGCVSASTPPPFR*SLSLRPGLSVRRFR Trigger: CCTGAAGCGGCGGACCGAGAGCCCGGGTCTGAGACTGAGAGAGCAACGGAATGGAGGCGGGGTAGAGGCGGAAACACAACCTGCAGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CAA 90 bp | CTTGATACTGGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGCCGCCGCTTCAGGTCTaGGCGCAGCCTCAGAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LDTGYSVQSFCVAHLEGEPPLQV*AQPQRV Trigger: AACTCTCTGAGGCTGCGCCAAGACCTGAAGCGGCGG...CTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACCAGTATCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CAA 90 bp | CTTGATACTGGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGCCCGCCTCCATTCCGTaGCTCTCTCAGTCTCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LDTGYSVQSFCVAHLEGEPASIP*LSQSQT Trigger: GGTCTGAGACTGAGAGAGCAACGGAATGGAGGCGGG...CTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACCAGTATCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CAA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTCTCTGGCCCTGCAGGTaGTGTTTCCGCCTCTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLLWPCR*CFRLYP Trigger: GGGGTAGAGGCGGAAACACAACCTGCAGGGCCAGAG...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CAA 90 bp | CACTTCCCAGGTTCAAGCAATTCTCAGCCTCTGGAGGGAGTAGCTGGGACTACAGTAAAGACTCTTTTATaGAGCCTACTTCAGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: HFPGSSNSQPLEGVAGTTVKTLL*SLLQVL Trigger: CAGTACCTGAAGTAGGCTCAATAAAAGAGTCTTTAC...TGTAGTCCCAGCTACTCCCTCCAGAGGCTGAGAATTGCTTGAACCTGGGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CAA 90 bp | CACTTCCCAGGTTCAAGCAATTCTCAGCCTCTGGAGGGAGTAGCTGGGACTACAAGATCAAGGCAATCCTaGTATATATCCCAAAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: HFPGSSNSQPLEGVAGTTRSRQS*YISQNC Trigger: ACAGTTTTGGGATATATACAAGGATTGCCTTGATCT...TGTAGTCCCAGCTACTCCCTCCAGAGGCTGAGAATTGCTTGAACCTGGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CAA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTATGGACTGCAGGGCTTaGGCTCATATCTTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLMDCRA*AHIFHL Trigger: AAGGTGGAAGATATGAGCCAAAGCCCTGCAGTCCAT...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS-3UTR CAA 90 bp | CTTGATACTGGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGAATATCATCAACAACTaGATACTGGTTACTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LDTGYSVQSFCVAHLEGENIINN*ILVTLC Trigger: GCACAGAGTAACCAGTATCAAGTTGTTGATGATATT...CTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACCAGTATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR CAA 90 bp | CTTGATACTGGTTACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGATTCTTCAACTCGATTaGGATTTTTCTGGCCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LDTGYSVQSFCVAHLEGEILQLD*DFSGLL Trigger: TAACAGGCCAGAAAAATCCAAATCGAGTTGAAGAAT...CTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACCAGTATCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431138.5 |
||
| CDS-3UTR CAA 90 bp | ACCCCTATACATAATCTAATTACTCAGCACCAAAATACTAGCATGGTCCACCAGAATATCATCAACAACTaGATACTGGTTACTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPIHNLITQHQNTSMVHQNIINN*ILVTLC Trigger: GCACAGAGTAACCAGTATCAAGTTGTTGATGATATT...CTGGTGGACCATGCTAGTATTTTGGTGCTGAGTAATTAGATTATGTATAGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS-3UTR CAA 90 bp | TACTCTGTGCAAAGTTTCTGTGTTGCTCACTTAGAAGGTGAGTTTCTAGATCTTAATATCATCAACAACTaGATACTGGTTACTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YSVQSFCVAHLEGEFLDLNIINN*ILVTLC Trigger: GCACAGAGTAACCAGTATCAAGTTGTTGATGATATT...AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413643.5 ENST00000430279.5 ENST00000431138.5 |
||
| CDS-3UTR CAA 90 bp | AGTGCCAGATCAAGGCAATCCTTGTATATATCCCAAAACTGTATCTATAATTCAAAATGGCCTATAAAGTaGGCTCATATCTTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SARSRQSLYISQNCIYNSKWPIK*AHIFHL Trigger: AAGGTGGAAGATATGAGCCAACTTTATAGGCCATTT...TGAATTATAGATACAGTTTTGGGATATATACAAGGATTGCCTTGATCTGGCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265728.6 |
||
| CDS CCA 72 bp | GCCCCCTCACGCCGCCGTCCTTCTCGCGCCTCGCTCTaGCCCTGCAGGTTGTGTTTCCGCCTCTACCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: APSRRRPSRASL*PCRLCFRLYPA Trigger: GGCGGGGTAGAGGCGGAAACACAACCTGCAGGGCCAGAGCGAGGCGCGAGAAGGACGGCGGCGTGAGGGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS CAA 90 bp | CCCTCACGCCGCCGTCCTTCTCGCGCCTCGCTCTGGCCCTGCAGGTaGTGTTTCCGCCTCTACCCCGCCTCCATTCCGTTGCTCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSRRRPSRASLWPCR*CFRLYPASIPLLSQ Trigger: CTGAGAGAGCAACGGAATGGAGGCGGGGTAGAGGCGGAAACACAACCTGCAGGGCCAGAGCGAGGCGCGAGAAGGACGGCGGCGTGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS GCA 72 bp | TCACGCCGCCGTCCTTCTCGCGCCTCGCTCTGGCCCTaGAGGTTGTGTTTCCGCCTCTACCCCGCCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SRRRPSRASLWP*RLCFRLYPASI Trigger: AATGGAGGCGGGGTAGAGGCGGAAACACAACCTGCAGGGCCAGAGCGAGGCGCGAGAAGGACGGCGGCGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS CAA 72 bp | CGCCGTCCTTCTCGCGCCTCGCTCTGGCCCTGCAGGTaGTGTTTCCGCCTCTACCCCGCCTCCATTCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRPSRASLWPCR*CFRLYPASIPL Trigger: CAACGGAATGGAGGCGGGGTAGAGGCGGAAACACAACCTGCAGGGCCAGAGCGAGGCGCGAGAAGGACGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS CAA 90 bp | TGGCCCTGCAGGTTGTGTTTCCGCCTCTACCCCGCCTCCATTCCGTaGCTCTCTCAGTCTCAGACCCGGGCTCTCGGTCCGCCGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPCRLCFRLYPASIP*LSQSQTRALGPPLQ Trigger: CTGAAGCGGCGGACCGAGAGCCCGGGTCTGAGACTGAGAGAGCAACGGAATGGAGGCGGGGTAGAGGCGGAAACACAACCTGCAGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS GCA 72 bp | GGTTGTGTTTCCGCCTCTACCCCGCCTCCATTCCGTTaGTCTCTCAGTCTCAGACCCGGGCTCTCGGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GCVSASTPPPFR*SLSLRPGLSVR Trigger: GCGGACCGAGAGCCCGGGTCTGAGACTGAGAGAGCAACGGAATGGAGGCGGGGTAGAGGCGGAAACACAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413643.5 |
||
| CDS TCA 72 bp | TCTGGAGGACATTCCAACATTACAGTAAGCAGTCAATaGGCAGTTCCACTAGGACAGGGGAGTCTTACACTC | + |
|
Preference number: 6 (lower is better) Translates to: SGGHSNITVSSQ*AVPLGQGSLTL Trigger: GAGTGTAAGACTCCCCTGTCCTAGTGGAACTGCTCATTGACTGCTTACTGTAATGTTGGAATGTCCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495067.1 |
||