RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DARS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000117593

Ensembl transcript IDs: ENST00000471476.2, ENST00000647645.1, ENST00000647730.1, ENST00000647788.1, ENST00000648055.1, ENST00000648271.1, ENST00000648458.1, ENST00000648807.1, ENST00000648960.1, ENST00000649067.1, ENST00000649106.1, ENST00000649689.2, ENST00000650297.1

Found 797 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGCCTTTTTGGGCTCAGTGTACAGGAGATGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: RAFLGSVYRRCMSLG*GAVNGWWADSSSLG
Trigger: TCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTGAGCCCAAAAAGGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
3UTR CCA 90 bp TCCTCCTTTTTGGGCTCAGTGTACAGGAGATGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: SSFLGSVYRRCMSLG*GAVNGWWADSSSLG
Trigger: TCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTGAGCCCAAAAAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471476.2
3UTR CCA 90 bp GGCCGATTCCAGCTCTCTGGGATTTTCCTCCTTGGGCAGGAAGAGTaGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACG +
Preference number: 1 (lower is better)
Translates to: GRFQLSGIFLLGQEE*EIYHPKEREQSGVT
Trigger: CGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR CCA 90 bp GCAGGAAGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTCCTCTTGTTTCTAGAAGGTCAGCAC +
Preference number: 1 (lower is better)
Translates to: AGRVGNLPPKGKRTE*GHGAPLLLFLEGQH
Trigger: GTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR CCA 90 bp GACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTaGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAA +
Preference number: 1 (lower is better)
Translates to: DSDMIGLQFLRRDRI*GIAHEVMSPEGLWE
Trigger: TTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR CCA 90 bp AGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAG +
Preference number: 1 (lower is better)
Translates to: RIWGIAHEVMSPEGL*EGYDISDAWRSSDK
Trigger: CTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR CCA 90 bp CATGGTATGCATGATTCAATGAGCTCTTTCTGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGG +
Preference number: 1 (lower is better)
Translates to: HGMHDSMSSFCFGVC*LGDSDMIGLQFLRR
Trigger: CCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATACCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR GCA 90 bp ACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTaGTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATT +
Preference number: 1 (lower is better)
Translates to: TGIFLFSYKLNIMEQ*FPDSNECVCEAMGI
Trigger: AATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CCA 90 bp AACCCATGCAGATTACAGAGATATTCCCGCATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTATACTGCATTTGGAAACTACGCAAG +
Preference number: 1 (lower is better)
Translates to: NPCRLQRYSRIFMTI*DLSRRLYCIWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR TCA 90 bp TATCCACAAACCCATGCAGATTACAGAGATATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTCGCAGGTTATACTGCATTTGGAAAC +
Preference number: 1 (lower is better)
Translates to: YPQTHADYRDIPAFS*PSGTSVAGYTAFGN
Trigger: GTTTCCAAATGCAGTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCATGGGTTTGTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR TCA 90 bp ATGGCAATCAGAAGGACACTGGCATCTTCCTGTTTTCATACAAGCTaGACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTAT +
Preference number: 1 (lower is better)
Translates to: MAIRRTLASSCFHTS*TLWSSAFQTPMSAY
Trigger: ATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR GCA 90 bp AAGCTCAACTTTCTGCATGGTATGCATGATTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTT +
Preference number: 1 (lower is better)
Translates to: KLNFLHGMHDSMSSF*FGVCWLGDSDMIGL
Trigger: AAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATACCATGCAGAAAGTTGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR TCA 90 bp CGTTGTGGTGAAGAATGTTGCCTGGATTCCTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAGAACTCTAGATCTGACTTTAGCCTT +
Preference number: 1 (lower is better)
Translates to: RCGEECCLDSFHLKT*LLDLWQNSRSDFSL
Trigger: AAGGCTAAAGTCAGATCTAGAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR GCA 90 bp GCAGCTCTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTaGCATTTAAAACCAAGTCATAGTGTTGGCTACGGGCCTTTTTGG +
Preference number: 1 (lower is better)
Translates to: AALHCEFELNHLLFH*HLKPSHSVGYGPFW
Trigger: CCAAAAAGGCCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
3UTR GCA 90 bp AAAGGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGTaGTTGGCAGGGAACTCCATAAACACAGAAGGAAGTCCCTGTTGT +
Preference number: 1 (lower is better)
Translates to: KGLLKALKQIQQCIW*LAGNSINTEGSPCC
Trigger: ACAACAGGGACTTCCTTCTGTGTTTATGGAGTTCCCTGCCAAGCACCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CCA 90 bp GCTTTATTGTGCTCTCCAGCAGTTAGTAGGACCACATCTTCCTCTTaGGTCTCCATTAGTCTGATTAATTCCAGTCTTTGTGACTCCATT +
Preference number: 1 (lower is better)
Translates to: ALLCSPAVSRTTSSS*VSISLINSSLCDSI
Trigger: AATGGAGTCACAAAGACTGGAATTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCCTACTAACTGCTGGAGAGCACAATAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR TCA 90 bp CAAAGAGGACAAAACCTAAAAGCTCAACTTTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTGCTTTGGAGTCTGTTGGCTTGGAGA +
Preference number: 1 (lower is better)
Translates to: QRGQNLKAQLSAWYA*FNELFLLWSLLAWR
Trigger: TCTCCAAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATACCATGCAGAAAGTTGAGCTTTTAGGTTTTGTCCTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR TCA 90 bp AATCAAGTCAAAATTGGGTATCTTTTATCTGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTT +
Preference number: 1 (lower is better)
Translates to: NQVKIGYLLSVSSLW*RMLPGFLPSKDLIV
Trigger: AACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGAAACAGATAAAAGATACCCAATTTTGACTTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR CCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGGAGCAGTAAATGGGTaGTGGGCCGATTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWGAVNG*WADSSS
Trigger: AGAGCTGGAATCGGCCCACCACCCATTTACTGCTCC...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTGTGGGGAGCAGTAAATaGGTGGTGGGCCGATTCCAG +
Preference number: 2 (lower is better)
Translates to: HEVMSPEGLWEGYDISDAVGSSK*VVGRFQ
Trigger: CTGGAATCGGCCCACCACCCATTTACTGCTCCCCAC...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGTGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 2 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 2 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 2 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 2 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCCCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 2 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGTGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 2 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR CAA 90 bp GTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAATCTACCACCCAAAGGAAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: VNGWWADSSSLGFSS*GRKSGKSTTQRKEN
Trigger: GTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGACTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 2 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGCAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCCAGACTCCAATGAGTaGGTATGTGAGGCCATGGGG +
Preference number: 2 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPPDSNE*VCEAMG
Trigger: CCCCATGGCCTCACATACGCACTCATTGGAGTCTGG...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CCA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGACCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 2 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGTATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTC +
Preference number: 2 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPGKRTE*GHGAPL
Trigger: GAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCC...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGCTTGGGCAGGAAGAGTaGGAAATCTACCACCCAAAG +
Preference number: 2 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQLGQEE*EIYHPK
Trigger: CTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAG...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATCCGATTCCAGCTCTCTaGGATTTTCCTCCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADPIPAL*DFPPWA
Trigger: TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGATGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 2 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 2 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKASPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR GCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 2 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGTATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp AACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGCAGTAAATGGGTGGTaGGCCGATTCCAGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: NIMEQCFPDSNECVCEAMAVNGW*ADSSSL
Trigger: CAGAGAGCTGGAATCGGCCCACCACCCATTTACTGC...CATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 2 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR TCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 2 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR GCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTTGGATTCTCTTGTCCTaGAGGACGGGAAATGACTGT +
Preference number: 2 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLWILLS*RTGNDC
Trigger: ACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCA...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 2 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACCCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 2 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 2 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCCGATTCCAGCTCTCTaGGATTTTCCTCCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHPIPAL*DFPPWA
Trigger: TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471476.2
ENST00000647730.1
3UTR-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGTGGGGAGCAGTAAATaGGTGGTGGGCCGATTCCAG +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHVGSSK*VVGRFQ
Trigger: CTGGAATCGGCCCACCACCCATTTACTGCTCCCCAC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000471476.2
ENST00000647730.1
3UTR-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTTGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATG +
Preference number: 2 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPCFGVC*LGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCA...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR CAA 90 bp CCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCACATTCCAGTCGTAATTTTCCTAACA +
Preference number: 2 (lower is better)
Translates to: PKGKRTEWGHGAPLL*FLEGQHIPVVIFLT
Trigger: TGTTAGGAAAATTACGACTGGAATGTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 2 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACACTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 2 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTLSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 2 (lower is better)
Translates to: HEVMSPEGLWEGYDISDASRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 2 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGATTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 2 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 2 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCATATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: APSGIHMAFTVPWGLLSAYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCAAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 2 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGASLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 2 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 2 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKAMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAAACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 2 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 2 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCACCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 2 (lower is better)
Translates to: APSGIHMAFTVPWGLLSAPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTTTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 2 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR CAA 90 bp GGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGTGCTaGGCAGGGAACTCCATAAACACAGAAGGAAGTCCCTGTTGTTGG +
Preference number: 2 (lower is better)
Translates to: GLLKALKQIQQCIWC*AGNSINTEGSPCCW
Trigger: CCAACAACAGGGACTTCCTTCTGTGTTTATGGAGTTCCCTGCCAAGCACCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR TCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 2 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 2 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR GCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 2 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 2 (lower is better)
Translates to: HEVMSPEGLWEGYDISDAMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 2 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR GCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGTGTGGTGAAGAATGTTaGCTGGATTCCTTCCATCTA +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRCGEEC*LDSFHL
Trigger: TAGATGGAAGGAATCCAGGCAACATTCTTCACCACA...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTCTTTGGCACCCCCTaGGGTCCTCTTAAACAATGT +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLFGTP*GPLKQC
Trigger: ACATTGTTTAAGAGGACCCCAGGGGGTGCCAAAGAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCATTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 2 (lower is better)
Translates to: APSGIHMAFTVPWGLLSALGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 2 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR TCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGTACCTCTGTCCTAAGTaGATAATCTACTATCTGGGT +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRYLCPK*IIYYLG
Trigger: ACCCAGATAGTAGATTATTCACTTAGGACAGAGGTA...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000649067.1
3UTR-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR GCA 90 bp GTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTCAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: VTAISVPSKGLLKALKQIQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...AATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAACACTAATCGCTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648271.1
3UTR-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTGTGGTGAAGAATGTTaGCTGGATTCCTTCCATCTA +
Preference number: 2 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHCGEEC*LDSFHL
Trigger: TAGATGGAAGGAATCCAGGCAACATTCTTCACCACA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 2 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGTGTTCACATGCTACTTaGATTGTCACAGCGATTAGT +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRCSHAT*IVTAIS
Trigger: ACTAATCGCTGTGACAATCCAAGTAGCATGTGAACA...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CAA 90 bp GCAAAAGTCATAGTAGGAAAAGGAACAACCACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGCAAACCCTCAATTAAACTCTGGATC +
Preference number: 2 (lower is better)
Translates to: AKVIVGKGTTTGSLS*GQEYWSKPSIKLWI
Trigger: GATCCAGAGTTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGTTCCTTTTCCTACTATGACTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 2 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CCA 90 bp TATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: YFAPSGIHMAFTVPWGLLIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CCA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGATGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 2 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAAAAACTTACATTCTCATaGAACTCTTGGACTCATCCT +
Preference number: 2 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQKLTFS*NSWTHP
Trigger: AGGATGAGTCCAAGAGTTCCATGAGAATGTAAGTTT...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000649067.1
3UTR-3UTR GCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 2 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTGTGGTGAAGAATGTTaGCTGGATTCCTTCCATCTA +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHCGEEC*LDSFHL
Trigger: TAGATGGAAGGAATCCAGGCAACATTCTTCACCACA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR CCA 90 bp TCTTTAACAAACTGTAGCCAACCATCGTTCCCTACCTTTTTAGAGAACTTTTGTCTCTTTGGCACCCCCTaGGGTCCTCTTAAACAATGT +
Preference number: 2 (lower is better)
Translates to: SLTNCSQPSFPTFLENFCLFGTP*GPLKQC
Trigger: ACATTGTTTAAGAGGACCCCAGGGGGTGCCAAAGAG...ACAAAAGTTCTCTAAAAAGGTAGGGAACGATGGTTGGCTACAGTTTGTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648271.1
3UTR-3UTR CCA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAATTCAACAGTGTATTTaGTGCTTGGCAGGGAACTCC +
Preference number: 2 (lower is better)
Translates to: SHATWIVTAISVPSKGLLIQQCI*CLAGNS
Trigger: GGAGTTCCCTGCCAAGCACCAAATACACTGTTGAAT...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CAA 90 bp AGGTTGCCAGGATATAACGCTGCAGCTCTGCATTGTGAATTCGAATaGAACCACCTCCTATTTCATTGCCATTTAAAACCAAGTCATAGT +
Preference number: 2 (lower is better)
Translates to: RLPGYNAAALHCEFE*NHLLFHCHLKPSHS
Trigger: ACTATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGCTGCAGCGTTATATCCTGGCAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTACCTCTGTCCTAAGTaGATAATCTACTATCTGGGT +
Preference number: 2 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHYLCPK*IIYYLG
Trigger: ACCCAGATAGTAGATTATTCACTTAGGACAGAGGTA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 2 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000649067.1
3UTR-3UTR CCA 90 bp TATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 2 (lower is better)
Translates to: YFAPSGIHMAFTVPWGLLTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR CAA 90 bp GCCTCTGTTTTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCAGCTGTTTTAACTTTGATTTCAATC +
Preference number: 2 (lower is better)
Translates to: ASVFFTKFLISKGSF*QAFRSSAVLTLISI
Trigger: GATTGAAATCAAAGTTAAAACAGCTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAAAACAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CCA 90 bp CTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTGCCATTTAAAACCAGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 2 (lower is better)
Translates to: LHCEFELNHLLFHCHLKPAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...TGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
3UTR CAA 90 bp GATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCATCTaGAAGAAATCCAATCTCTGTGTTTCTAAACACATCACTGATATC +
Preference number: 2 (lower is better)
Translates to: DTYGFHSSMGLTKCI*KKSNLCVSKHITDI
Trigger: GATATCAGTGATGTGTTTAGAAACACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 3 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR TCA 72 bp GTTCCTCAGGAGGGACAGAATCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTA +
Preference number: 3 (lower is better)
Translates to: VPQEGQNLGYCS*GHVPGRTLGRL
Trigger: TAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCTCCTGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 3 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 3 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCAAAGAGCATGCTTTATaGTGCTCTCCAGCAGTTAGT +
Preference number: 3 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSKEHAL*CSPAVS
Trigger: ACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTT...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: HEVMSPEGLWEGYDISDALGFSS*GRKSGK
Trigger: TTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAG...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 3 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CAA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGATCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 3 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 3 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKATTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAAACCAAGTCATAGTGTaGGCTACGGGCCTTTTTGGG +
Preference number: 3 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGNQVIV*ATGLFG
Trigger: CCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTT...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
3UTR CCA 72 bp GGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCTGATGCTTGGAGATCC +
Preference number: 3 (lower is better)
Translates to: GIAHEVMSPEGL*EGYDISDAWRS
Trigger: GGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CAA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 3 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACATCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 3 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 3 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR CCA 72 bp GTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTCCTCTTGTTTCTAGAA +
Preference number: 3 (lower is better)
Translates to: VGNLPPKGKRTE*GHGAPLLLFLE
Trigger: TTCTAGAAACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 3 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 3 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 3 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 3 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 3 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 3 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLTTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR TCA 72 bp GCATTTTTGGATTCTCTTGTCCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCACCACAGATTCCACAG +
Preference number: 3 (lower is better)
Translates to: AFLDSLVLQDGK*LYQTLAPQIPQ
Trigger: CTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGCATTGTGAATTCGAATaGAACCACCTCCTATTTCAT +
Preference number: 3 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGHCEFE*NHLLFH
Trigger: ATGAAATAGGAGGTGGTTCAATTCGAATTCACAATG...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 3 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CAA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 3 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCAC +
Preference number: 3 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHGAPLL*FLEGQH
Trigger: GTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471476.2
ENST00000647730.1
3UTR-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCCTCCTTTAGTAAGGTaGCCAGGATATAACGCTGCA +
Preference number: 3 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHPPLVR*PGYNAA
Trigger: TGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647730.1
3UTR TCA 72 bp ACCCATGCAGATTACAGAGATATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTCGCAGGTTATACTGCA +
Preference number: 3 (lower is better)
Translates to: THADYRDIPAFS*PSGTSVAGYTA
Trigger: TGCAGTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 3 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CAA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCACACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: VAGYTAFGNYASLSSDTAHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCATTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 3 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGAFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp TATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 3 (lower is better)
Translates to: YFAPSGIHMAFTVPWGLLTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAAAAAGAGCATGCTTTATaGTGCTCTCCAGCAGTTAGT +
Preference number: 3 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQKEHAL*CSPAVS
Trigger: ACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTT...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648271.1
3UTR CCA 72 bp GGCCAGGAATACTGGAGCAAACCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACAAATGACATCTCTATG +
Preference number: 3 (lower is better)
Translates to: GQEYWSKPSIKL*IPVWSTNDISM
Trigger: CATAGAGATGTCATTTGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGGTTTGCTCCAGTATTCCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGAACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 3 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR TCA 72 bp AGAAGGACACTGGCATCTTCCTGTTTTCATACAAGCTaGACATTATGGAGCAGTGCTTTCCAGACTCCAATG +
Preference number: 3 (lower is better)
Translates to: RRTLASSCFHTS*TLWSSAFQTPM
Trigger: CATTGGAGTCTGGAAAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR GCA 72 bp TTTCTGCATGGTATGCATGATTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTTGGAGACTCGGATATG +
Preference number: 3 (lower is better)
Translates to: FLHGMHDSMSSF*FGVCWLGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATACCATGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CAA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 3 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 3 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR TCA 72 bp GAAGAATGTTGCCTGGATTCCTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAGAACTCTAGATCTGAC +
Preference number: 3 (lower is better)
Translates to: EECCLDSFHLKT*LLDLWQNSRSD
Trigger: GTCAGATCTAGAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR TCA 72 bp ATGTTATCTCCTCTGATTCCAGCAATAACAGCCCGGTaGGGTAGCCAGGGCAAGTATGTATTTTACACATTA +
Preference number: 3 (lower is better)
Translates to: MLSPLIPAITAR*GSQGKYVFYTL
Trigger: TAATGTGTAAAATACATACTTGCCCTGGCTACCTCACCGGGCTGTTATTGCTGGAATCAGAGGAGATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR CCA 72 bp AGATTACAGAGATATTCCCGCATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTATACTGCATTTGGAAA +
Preference number: 3 (lower is better)
Translates to: RLQRYSRIFMTI*DLSRRLYCIWK
Trigger: TTTCCAAATGCAGTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR TCA 72 bp TTCTTACTCTTCCTTGCTTTGACAAAACAAGCAAAGTaGGTAACCATGGCAATCAGAAGGACACTGGCATCT +
Preference number: 3 (lower is better)
Translates to: FLLFLALTKQAK*VTMAIRRTLAS
Trigger: AGATGCCAGTGTCCTTCTGATTGCCATGGTTACTCACTTTGCTTGTTTTGTCAAAGCAAGGAAGAGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR-3UTR CAA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 3 (lower is better)
Translates to: VCLVLNLHLDNIGQPENIFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTTACTAAGTGCATCTaGAAGAAATCCAATCTCTGT +
Preference number: 3 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLTKCI*KKSNLC
Trigger: ACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
3UTR-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGAATTCCAGTTTCTATaGGCGTTAAGGAATACAGGT +
Preference number: 3 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISEFQFL*ALRNTG
Trigger: ACCTGTATTCCTTAACGCCAATAGAAACTGGAATTC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471476.2
ENST00000647730.1
3UTR GCA 72 bp CATTGTGAATTCGAATTGAACCACCTCCTATTTCATTaGCATTTAAAACCAAGTCATAGTGTTGGCTACGGG +
Preference number: 3 (lower is better)
Translates to: HCEFELNHLLFH*HLKPSHSVGYG
Trigger: CCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
3UTR GCA 72 bp ACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAATCTCTGTGTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: TYGFHSSMGLTK*ILKKSNLCVSK
Trigger: TTTAGAAACACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
3UTR TCA 72 bp AAAATTGGGTATCTTTTATCTGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTCCTTCCATCTAAAGAC +
Preference number: 3 (lower is better)
Translates to: KIGYLLSVSSLW*RMLPGFLPSKD
Trigger: GTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGAAACAGATAAAAGATACCCAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR TCA 72 bp AGTGCGTATGTGAGGCCATGGGGATTTGAACAATATTaGCTTAAGATCTGCAGTTTTAAGCTATTAATGATC +
Preference number: 3 (lower is better)
Translates to: SAYVRPWGFEQY*LKICSFKLLMI
Trigger: GATCATTAATAGCTTAAAACTGCAGATCTTAAGTCAATATTGTTCAAATCCCCATGGCCTCACATACGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCC +
Preference number: 4 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSVGWSF*WVWINP
Trigger: GGGGTTTATCCAGACCCATCAGAAGGACCACCCAAC...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGAGTGGGGAGCAGTAAATaGGTGGTGGGCCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRVGSSK*VVGRFQ
Trigger: CTGGAATCGGCCCACCACCCATTTACTGCTCCCCAC...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCC +
Preference number: 4 (lower is better)
Translates to: RRCMSLGWGAVNGWWADSVGWSF*WVWINP
Trigger: GGGGTTTATCCAGACCCATCAGAAGGACCACCCAAC...GGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGGGTCTCTGGGGTGCTTaGTGGGGTGGAGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGGLWGA*WGGDKG
Trigger: TCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACC...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp AGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCCCAGACTCCAATGAGTaGGTATGTGAGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RRCMSLGWGAVNGWWADSPDSNE*VCEAMG
Trigger: CCCCATGGCCTCACATACGCACTCATTGGAGTCTGG...GGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648271.1
CDS-3UTR TCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCC +
Preference number: 4 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGVGWSF*WVWINP
Trigger: GGGGTTTATCCAGACCCATCAGAAGGACCACCCAAC...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCTCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSSIHTR*LLGLSE
Trigger: CTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGA...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGGTCTCTGGGGTGCTTaGTGGGGTGGAGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWGLWGA*WGGDKG
Trigger: TCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACC...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGGGTCTCTGGGGTGCTTaGTGGGGTGGAGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQGLWGA*WGGDKG
Trigger: TCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACC...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR CAA 72 bp TGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAATCTACCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: WWADSSSLGFSS*GRKSGKSTTQR
Trigger: CCTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGGCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
3UTR CAA 72 bp GGCTTCAGTTCCTCAGGAGGGACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: GFSSSGGTESGV*LMRSCPRKDFG
Trigger: CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCTCCTGAGGAACTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: HEVMSPEGLWEGYDISDALGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGTTCAAGCAAACCTCATaGCTCAGCCTCCCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWFKQTS*LSLPSG
Trigger: GCCACTCGGGAGGCTGAGGCATGAGGTTTGCTTGAA...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR CCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGATCTCGCAGACCTGCTaGCCGATTTCGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGISQTC*PISSLL
Trigger: CAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGAT...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCNLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKANLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTC +
Preference number: 4 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQGKRTE*GHGAPL
Trigger: GAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCC...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGCCGATTCCAGCTCTCTaGGATTTTCCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGPIPAL*DFPPWA
Trigger: TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTGGAGCAGTAAATGGGTaGTGGGCCGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCGAVNG*WADSSS
Trigger: AGAGCTGGAATCGGCCCACCACCCATTTACTGCTCC...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATGTGGGGAGCAGTAAATaGGTGGTGGGCCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADVGSSK*VVGRFQ
Trigger: CTGGAATCGGCCCACCACCCATTTACTGCTCCCCAC...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGAACACAGATCGCCGCTaGGGTCCAAGCGCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWNTDRR*GPSALQ
Trigger: TTGAAGGGCGCTTGGACCCCAGCGGCGATCTGTGTT...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647730.1
ENST00000647788.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCCGATTTCGAGTCTTCTaGAAGAGGAAGGCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RRCMSLGWGAVNGWWADSRFRVF*KRKASK
Trigger: TTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCG...GGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGAAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGTGCCGACTTCGGTACTaGATCCATCCACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMCRLRY*IHPHKV
Trigger: CACCTTGTGTGGATGGATTCAGTACCGAAGTCGGCA...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGTGCCGACTTCGGTACTaGATCCATCCACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWCRLRY*IHPHKV
Trigger: CACCTTGTGTGGATGGATTCAGTACCGAAGTCGGCA...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACACTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATGGATTCTCTTGTCCTaGAGGACGGGAAATGACTGT +
Preference number: 4 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRWILLS*RTGNDC
Trigger: ACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCA...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGATCTCGCAGACCTGCTaGCCGATTTCGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQISQTC*PISSLL
Trigger: CAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGAT...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGNLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDNLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADEPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGGAGCAGTAAATGGGTaGTGGGCCGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGGAVNG*WADSSS
Trigger: AGAGCTGGAATCGGCCCACCACCCATTTACTGCTCC...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCC +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPVGWSF*WVWINP
Trigger: GGGGTTTATCCAGACCCATCAGAAGGACCACCCAAC...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGTCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAG +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMSIHTR*LLGLSE
Trigger: CTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGA...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTCAAATCTCGCAGACCTaGTGGCCGATTTCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCQISQT*WPISSL
Trigger: AAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTG...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTCAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCTGTGGTGAAGAATGTTaGCTGGATTCCTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSCGEEC*LDSFHL
Trigger: TAGATGGAAGGAATCCAGGCAACATTCTTCACCACA...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTNLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTCACATCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: FTSSAPSGIHMAFTVPWGEPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR CCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGCTTGGGCAGGAAGAGTaGGAAATCTACCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMLGQEE*EIYHPK
Trigger: CTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAG...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAGGAGCAGTAAATGGGTaGTGGGCCGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTGAVNG*WADSSS
Trigger: AGAGCTGGAATCGGCCCACCACCCATTTACTGCTCC...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATTGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATCACATCCTCCTTTTTaGGCTCAGTGTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRSHPPF*AQCTGD
Trigger: ATCTCCTGTACACTGAGCCCAAAAAGGAGGATGTGA...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471476.2
CDS-3UTR CCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWSPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGTGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 4 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAAAACACAGATCGCCGCTaGGGTCCAAGCGCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQNTDRR*GPSALQ
Trigger: TTGAAGGGCGCTTGGACCCCAGCGGCGATCTGTGTT...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649067.1
CDS-3UTR CCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACGGCTACGGGCCTTTTTaGGCTCAGTGTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDGYGPF*AQCTGD
Trigger: ATCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCC...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKAKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRCMSLGWGAVNGWWADSGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...GGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADTSWPK*DERNSP
Trigger: TGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGT...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWTSWPK*DERNSP
Trigger: TGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGT...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAG +
Preference number: 4 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRSIHTR*LLGLSE
Trigger: CTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGA...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACATGCCGACTTCGGTACTaGATCCATCCACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTCRLRY*IHPHKV
Trigger: CACCTTGTGTGGATGGATTCAGTACCGAAGTCGGCA...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGTGCTTGGAGATCCAGTaGCAAGGCATATCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWCLEIQ*QGISVC
Trigger: ACAGACTGATATGCCTTGTCACTGGATCTCCAAGCA...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACCAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGAAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 4 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCATCTCGCAGACCTGCTaGCCGATTTCGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTISQTC*PISSLL
Trigger: CAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGAT...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGTATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCAGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTC +
Preference number: 4 (lower is better)
Translates to: APSGIHMAFTVPWGLLSAGKRTE*GHGAPL
Trigger: GAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCC...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCCGATTCCAGCTCTCTaGGATTTTCCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPPIPAL*DFPPWA
Trigger: TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCAGCAGTAAATGGGTGGTaGGCCGATTCCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: APSGIHMAFTVPWGLLSAAVNGW*ADSSSL
Trigger: CAGAGAGCTGGAATCGGCCCACCACCCATTTACTGC...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGTGGGGAGCAGTAAATaGGTGGTGGGCCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHVGSSK*VVGRFQ
Trigger: CTGGAATCGGCCCACCACCCATTTACTGCTCCCCAC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGTGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 4 (lower is better)
Translates to: LLAWRLGYDRASVPQEGQWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTTGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 4 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKAWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTCGATTTCGAGTCTTCTaGAAGAGGAAGGCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: HEVMSPEGLWEGYDISDARFRVF*KRKASK
Trigger: TTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCG...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGGKTSP*VLKHQS
Trigger: AGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCC...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCAGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGAGKTSP*VLKHQS
Trigger: AGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCC...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCC +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHVGWSF*WVWINP
Trigger: GGGGTTTATCCAGACCCATCAGAAGGACCACCCAAC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAGGTCTCTGGGGTGCTTaGTGGGGTGGAGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTAGLWGA*WGGDKG
Trigger: TCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACC...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGGTCTCTGGGGTGCTTaGTGGGGTGGAGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELGLWGA*WGGDKG
Trigger: TCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGATTCTCTTGTCCTaGAGGACGGGAAATGACTGT +
Preference number: 4 (lower is better)
Translates to: HEVMSPEGLWEGYDISDAWILLS*RTGNDC
Trigger: ACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCA...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHNLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHEPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAACTCTCCACATGTGTTaGTCCGGACAACAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRTLHMC*SGQQSY
Trigger: GTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGT...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCTCTTTGGCACCCCCTaGGGTCCTCTTAAACAATGT +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPLFGTP*GPLKQC
Trigger: ACATTGTTTAAGAGGACCCCAGGGGGTGCCAAAGAG...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTCCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 4 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKAPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGCCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HEVMSPEGLWEGYDISDAQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTC +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHGKRTE*GHGAPL
Trigger: GAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCCGATTCCAGCTCTCTaGGATTTTCCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRPIPAL*DFPPWA
Trigger: TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCACCGATTCCAGCTCTCTaGGATTTTCCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: APSGIHMAFTVPWGLLSAPIPAL*DFPPWA
Trigger: TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGCAGTAAATGGGTGGTaGGCCGATTCCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHAVNGW*ADSSSL
Trigger: CAGAGAGCTGGAATCGGCCCACCACCCATTTACTGC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTGGAGCAGTAAATGGGTaGTGGGCCGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPGAVNG*WADSSS
Trigger: AGAGCTGGAATCGGCCCACCACCCATTTACTGCTCC...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAATGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTAGGAGGGACAGAATCTaGGGTATTGCTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPRRDRI*GIAHEV
Trigger: GACCTCATGAGCAATACCCCAGATTCTGTCCCTCCT...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTAGGAGGGACAGAATCTaGGGTATTGCTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLRRDRI*GIAHEV
Trigger: GACCTCATGAGCAATACCCCAGATTCTGTCCCTCCT...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCATGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 4 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGAWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCATGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATG +
Preference number: 4 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGACFGVC*LGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCA...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAACACAGATCGCCGCTaGGGTCCAAGCGCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELNTDRR*GPSALQ
Trigger: TTGAAGGGCGCTTGGACCCCAGCGGCGATCTGTGTT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATGGCTACGGGCCTTTTTaGGCTCAGTGTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHGYGPF*AQCTGD
Trigger: ATCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCC...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAGTCGGCAGCCAAAAGTaGCGACGAGAGAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: SHATWIVTAISVPSKGLLVGSQK*RRESDS
Trigger: GGAGTCGCTCTCTCGTCGTCACTTTTGGCTGCCGAC...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTGCCGACTTCGGTACTaGATCCATCCACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHCRLRY*IHPHKV
Trigger: CACCTTGTGTGGATGGATTCAGTACCGAAGTCGGCA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
CDS-3UTR TCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSAPSGIHMAFTVPWGLLIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR TCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAAATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 4 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGALSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGAGTCTGTCTAACCCTGTaGGTAAAATACAAAGATAAC +
Preference number: 4 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRVCLTL*VKYKDN
Trigger: GTTATCTTTGTATTTTACTCACAGGGTTAGACAGAC...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648271.1
CDS-3UTR GCA 90 bp TTTAAGTATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCGGTCTCTGGGGTGCTTaGTGGGGTGGAGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: FKYFAPSGIHMAFTVPWGGLWGA*WGGDKG
Trigger: TCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACC...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACCAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCTTCTTCACAGAGGCTaGCGACTCATCCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHLLHRG*RLILGN
Trigger: ATTCCCCAGGATGAGTCGGCAGCCTCTGTGAAGAAG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTCCAGACTCCAATGAGTaGGTATGTGAGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLPDSNE*VCEAMG
Trigger: CCCCATGGCCTCACATACGCACTCATTGGAGTCTGG...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGAACATTATGGAGCAGTaGTTTCCAGACTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMNIMEQ*FPDSNE
Trigger: CTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATGTTGGAGCCACACGATaGCGAAAAACAATCACGAAA +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADVGATR*RKTITK
Trigger: TTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAAC...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELEPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCACTCTCCACATGTGTTaGTCCGGACAACAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTTLHMC*SGQQSY
Trigger: GTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGT...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTCACATCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCACTCTCCACATGTGTTaGTCCGGACAACAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: FTSSAPSGIHMAFTVPWGTLHMC*SGQQSY
Trigger: GTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGT...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR CCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCTCTTTGGCACCCCCTaGGGTCCTCTTAAACAATGT +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRLFGTP*GPLKQC
Trigger: ACATTGTTTAAGAGGACCCCAGGGGGTGCCAAAGAG...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCACTCTTTGGCACCCCCTaGGGTCCTCTTAAACAATGT +
Preference number: 4 (lower is better)
Translates to: APSGIHMAFTVPWGLLSALFGTP*GPLKQC
Trigger: ACATTGTTTAAGAGGACCCCAGGGGGTGCCAAAGAG...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTTATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTTATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTC +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELGKRTE*GHGAPL
Trigger: GAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTGGAAAGAGAACAGAGTaGGGTCACGGAGCACCACTC +
Preference number: 4 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLGKRTE*GHGAPL
Trigger: GAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCC...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGGAGCAGTAAATGGGTaGTGGGCCGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELGAVNG*WADSSS
Trigger: AGAGCTGGAATCGGCCCACCACCCATTTACTGCTCC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTTGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATG +
Preference number: 4 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLCFGVC*LGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCA...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
3UTR CAA 72 bp AAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCACATTCCAGTCGTAATT +
Preference number: 4 (lower is better)
Translates to: KRTEWGHGAPLL*FLEGQHIPVVI
Trigger: AATTACGACTGGAATGTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCC +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHVGWSF*WVWINP
Trigger: GGGGTTTATCCAGACCCATCAGAAGGACCACCCAAC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPTSWPK*DERNSP
Trigger: TGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGT...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHTSWPK*DERNSP
Trigger: TGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTATGCTTGGAGATCCAGTaGCAAGGCATATCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSAPSGIHMAFTVPWGLLCLEIQ*QGISVC
Trigger: ACAGACTGATATGCCTTGTCACTGGATCTCCAAGCA...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR TCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCATGCTTGGAGATCCAGTaGCAAGGCATATCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: APSGIHMAFTVPWGLLSACLEIQ*QGISVC
Trigger: ACAGACTGATATGCCTTGTCACTGGATCTCCAAGCA...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCATCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGASAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTTACCTCTGTCCTAAGTaGATAATCTACTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKAYLCPK*IIYYLG
Trigger: ACCCAGATAGTAGATTATTCACTTAGGACAGAGGTA...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000649067.1
CDS-3UTR GCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTCAAATCTCGCAGACCTaGTGGCCGATTTCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPQISQT*WPISSL
Trigger: AAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTG...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGGTCTCTGGGGTGCTTaGTGGGGTGGAGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISGLWGA*WGGDKG
Trigger: TCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGATCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTTCTTCACAGAGGCTaGCGACTCATCCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLLHRG*RLILGN
Trigger: ATTCCCCAGGATGAGTCGGCAGCCTCTGTGAAGAAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCATCTCGCAGACCTGCTaGCCGATTTCGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELISQTC*PISSLL
Trigger: CAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGAT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCATCTCGCAGACCTGCTaGCCGATTTCGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VCLVLNLHLDNIGQPENIISQTC*PISSLL
Trigger: CAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGAT...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHNLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGTGCAAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: APSGIHMAFTVPWGLLSAKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...TGCACTTAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHEPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCTCTTTGGCACCCCCTaGGGTCCTCTTAAACAATGT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHLFGTP*GPLKQC
Trigger: ACATTGTTTAAGAGGACCCCAGGGGGTGCCAAAGAG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCCCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 4 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGTTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAATATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTCACATCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: FTSSAPSGIHMAFTVPWGAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCCGATTCCAGCTCTCTaGGATTTTCCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELPIPAL*DFPPWA
Trigger: TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTTAAGTATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCGCAGTAAATGGGTGGTaGGCCGATTCCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FKYFAPSGIHMAFTVPWGAVNGW*ADSSSL
Trigger: CAGAGAGCTGGAATCGGCCCACCACCCATTTACTGC...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGCAGTAAATGGGTGGTaGGCCGATTCCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHAVNGW*ADSSSL
Trigger: CAGAGAGCTGGAATCGGCCCACCACCCATTTACTGC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGTGGGGAGCAGTAAATaGGTGGTGGGCCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISVGSSK*VVGRFQ
Trigger: CTGGAATCGGCCCACCACCCATTTACTGCTCCCCAC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCTGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: VCLVLNLHLDNIGQPENICMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHSPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAGGAGGGACAGAATCTaGGGTATTGCTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHRRDRI*GIAHEV
Trigger: GACCTCATGAGCAATACCCCAGATTCTGTCCCTCCT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGTGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATG +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRCFGVC*LGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCA...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGTGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATG +
Preference number: 4 (lower is better)
Translates to: NIMEQCFPDSNECVCEAMCFGVC*LGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCA...CATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAACACAGATCGCCGCTaGGGTCCAAGCGCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISNTDRR*GPSALQ
Trigger: TTGAAGGGCGCTTGGACCCCAGCGGCGATCTGTGTT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGGCTACGGGCCTTTTTaGGCTCAGTGTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELGYGPF*AQCTGD
Trigger: ATCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGCAATCAGAAGGACACTaGCATCTTCCTGTTTTCATA +
Preference number: 4 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWQSEGH*HLPVFI
Trigger: TATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTG...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGCAATCAGAAGGACACTaGCATCTTCCTGTTTTCATA +
Preference number: 4 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMQSEGH*HLPVFI
Trigger: TATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTG...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAATTCAACAGTGTATTTaGTGCTTGGCAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTIQQCI*CLAGNS
Trigger: GGAGTTCCCTGCCAAGCACCAAATACACTGTTGAAT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCC +
Preference number: 4 (lower is better)
Translates to: SHATWIVTAISVPSKGLLVGWSF*WVWINP
Trigger: GGGGTTTATCCAGACCCATCAGAAGGACCACCCAAC...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: VCLVLNLHLDNIGQPENITSWPK*DERNSP
Trigger: TGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGT...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELTSWPK*DERNSP
Trigger: TGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAG +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTASIHTR*LLGLSE
Trigger: CTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGA...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELSIHTR*LLGLSE
Trigger: CTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTAIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACCTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 4 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYLSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRLSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTTGCTTGGAGATCCAGTaGCAAGGCATATCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPCLEIQ*QGISVC
Trigger: ACAGACTGATATGCCTTGTCACTGGATCTCCAAGCA...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTGCTTGGAGATCCAGTaGCAAGGCATATCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHCLEIQ*QGISVC
Trigger: ACAGACTGATATGCCTTGTCACTGGATCTCCAAGCA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGCTGGGGTATTGCTCATaGGGTCATGTCCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPSKGLLKALKQIQQCIWLGYCS*GHVPGR
Trigger: CCTTCCGGGGACATGACCTCATGAGCAATACCCCAG...CCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACATGGGGAATGATAACTTaGACAAGCCCATCGAAATCT +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTWGMIT*TSPSKS
Trigger: AGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCA...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649067.1
CDS-3UTR TCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGTTTTCATACAAGCTaGACATTATGGAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: HEVMSPEGLWEGYDISDACFHTS*TLWSSA
Trigger: AGCACTGCTCCATAATGTTCAGCTTGTATGAAAACA...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAACAAAACAAGCAAAGTaGGTAACCATGGCAATCAGA +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGTKQAK*VTMAIR
Trigger: TCTGATTGCCATGGTTACTCACTTTGCTTGTTTTGT...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCAAATCTCGCAGACCTaGTGGCCGATTTCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELQISQT*WPISSL
Trigger: AAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATCTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADLKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTCTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: HEVMSPEGLWEGYDISDALKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTATVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTGGATTCTCTTGTCCTaGAGGACGGGAAATGACTGT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHWILLS*RTGNDC
Trigger: ACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTCACATCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FTSSAPSGIHMAFTVPWGSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR GCA 90 bp AAAGTGAGTAACCATGGCAATCAGAAGGACACTGGCATCTTCCTGTTTTCATACCTTCTTCACAGAGGCTaGCGACTCATCCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KVSNHGNQKDTGIFLFSYLLHRG*RLILGN
Trigger: ATTCCCCAGGATGAGTCGGCAGCCTCTGTGAAGAAG...GTATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTGCCATGGTTACTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649067.1
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISNLQGL*GACWGG
Trigger: TCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGAGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQREPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISEPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAAATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTCTTTGGCACCCCCTaGGGTCCTCTTAAACAATGT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLFGTP*GPLKQC
Trigger: ACATTGTTTAAGAGGACCCCAGGGGGTGCCAAAGAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTTTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTTGGGCAGGAAGAGTaGGAAATCTACCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLGQEE*EIYHPK
Trigger: CTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGGAGCAGTAAATGGGTaGTGGGCCGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISGAVNG*WADSSS
Trigger: AGAGCTGGAATCGGCCCACCACCCATTTACTGCTCC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTATGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: YFAPSGIHMAFTVPWGLLCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGGCTACGGGCCTTTTTaGGCTCAGTGTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHGYGPF*AQCTGD
Trigger: ATCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGTTCTCATGGAACTCTTaGACTCATCCTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRFSWNS*THPSTS
Trigger: AGAGGTGGAAGGATGAGTCCAAGAGTTCCATGAGAA...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGATTCAACAGTGTATTTaGTGCTTGGCAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: NIMEQCFPDSNECVCEAMIQQCI*CLAGNS
Trigger: GGAGTTCCCTGCCAAGCACCAAATACACTGTTGAAT...CATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTCGATTTCGAGTCTTCTaGAAGAGGAAGGCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLRFRVF*KRKASK
Trigger: TTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCG...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELGKTSP*VLKHQS
Trigger: AGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLGKTSP*VLKHQS
Trigger: AGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCC...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHTSWPK*DERNSP
Trigger: TGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHSIHTR*LLGLSE
Trigger: CTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTGCAGGACGGGAAATaGCTGTACCAGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLQDGK*LYQTLA
Trigger: TGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHLSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTTGCTTGGAGATCCAGTaGCAAGGCATATCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLCLEIQ*QGISVC
Trigger: ACAGACTGATATGCCTTGTCACTGGATCTCCAAGCA...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGGTCTGTCTAACCCTGTaGGTAAAATACAAAGATAAC +
Preference number: 4 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWVCLTL*VKYKDN
Trigger: GTTATCTTTGTATTTTACTCACAGGGTTAGACAGAC...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCCAAATCTCGCAGACCTaGTGGCCGATTTCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFQISQT*WPISSL
Trigger: AAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTG...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPLKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACACTGTACCAGACACTTaGACCACAGATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHTVPDT*TTDSTG
Trigger: CCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTGGATTCTCTTGTCCTaGAGGACGGGAAATGACTGT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELWILLS*RTGNDC
Trigger: ACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACATATCCACAAACCCATaGAGATTACAGAGATATTCC +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDISTNP*RLQRYS
Trigger: GGAATATCTCTGTAATCTGCATGGGTTTGTGGATAT...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTTCTTCACAGAGGCTaGCGACTCATCCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLLHRG*RLILGN
Trigger: ATTCCCCAGGATGAGTCGGCAGCCTCTGTGAAGAAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGAACATTATGGAGCAGTaGTTTCCAGACTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRNIMEQ*FPDSNE
Trigger: CTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGTTGGAGCCACACGATaGCGAAAAACAATCACGAAA +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHVGATR*RKTITK
Trigger: TTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAAC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCACTCTCCACATGTGTTaGTCCGGACAACAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELTLHMC*SGQQSY
Trigger: GTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCACAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTAQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AAGCTGAACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: KLNIMEQCFPDSNECVCEAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...CTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTTCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTTGGGCAGGAAGAGTaGGAAATCTACCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLGQEE*EIYHPK
Trigger: CTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISCMSLG*GAVNGW
Trigger: CCACCCATTTACTGCTCCCCACCCCAGTGACATACA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFSPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 4 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSSPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHSPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCAGGAGGGACAGAATCTaGGGTATTGCTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFRRDRI*GIAHEV
Trigger: GACCTCATGAGCAATACCCCAGATTCTGTCCCTCCT...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCTGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 4 (lower is better)
Translates to: VCLVLNLHLDNIGQPENIWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCTGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATG +
Preference number: 4 (lower is better)
Translates to: VCLVLNLHLDNIGQPENICFGVC*LGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCA...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAAAACTTACATTCTCATaGAACTCTTGGACTCATCCT +
Preference number: 4 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGKLTFS*NSWTHP
Trigger: AGGATGAGTCCAAGAGTTCCATGAGAATGTAAGTTT...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CAA 72 bp AAGGCCCTAAAACAGATTCAACAGTGTATTTGGTGCTaGGCAGGGAACTCCATAAACACAGAAGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KALKQIQQCIWC*AGNSINTEGSP
Trigger: GGGACTTCCTTCTGTGTTTATGGAGTTCCCTGCCAAGCACCAAATACACTGTTGAATCTGTTTTAGGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCGATTTCGAGTCTTCTaGAAGAGGAAGGCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHRFRVF*KRKASK
Trigger: TTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: YFAPSGIHMAFTVPWGLLGKTSP*VLKHQS
Trigger: AGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCC...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHGKTSP*VLKHQS
Trigger: AGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGAATTCCCGCATTTTCATaGCCATCTGGGACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRIPAFS*PSGTSV
Trigger: GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAAT...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCACTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTALSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTGCTTGGAGATCCAGTaGCAAGGCATATCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHCLEIQ*QGISVC
Trigger: ACAGACTGATATGCCTTGTCACTGGATCTCCAAGCA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp AAGCTGAACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KLNIMEQCFPDSNECVCESAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...CTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTTCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AAGCTGAACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KLNIMEQCFPDSNECVCEFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...CTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTTCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTGTTTCTTCGTTGTGGTaGAGAATGTTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLVSSLW*RMLPGF
Trigger: GAATCCAGGCAACATTCTTCACCACAACGAAGAAAC...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTGGGGAATGATAACTTaGACAAGCCCATCGAAATCT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHWGMIT*TSPSKS
Trigger: AGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTTTTGCCTTCGGTACTaGATCCATCCACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHFCLRY*IHPHKV
Trigger: CACCTTGTGTGGATGGATTCAGTACCGAAGGCAAAA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACTCTACCAACACAAACTaGGAACCTGAATTTGAGACA +
Preference number: 4 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYSTNTN*EPEFET
Trigger: TGTCTCAAATTCAGGTTCTCAGTTTGTGTTGGTAGA...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648271.1
CDS-3UTR TCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAATCTACCAACACAAACTaGGAACCTGAATTTGAGACA +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQSTNTN*EPEFET
Trigger: TGTCTCAAATTCAGGTTCTCAGTTTGTGTTGGTAGA...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAATGTTTTCATACAAGCTaGACATTATGGAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQCFHTS*TLWSSA
Trigger: AGCACTGCTCCATAATGTTCAGCTTGTATGAAAACA...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATACAAAACAAGCAAAGTaGGTAACCATGGCAATCAGA +
Preference number: 4 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHTKQAK*VTMAIR
Trigger: TCTGATTGCCATGGTTACTCACTTTGCTTGTTTTGT...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACAAATCTCGCAGACCTaGTGGCCGATTTCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISQISQT*WPISSL
Trigger: AAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTACAAAGGGCAGCTTCTTaGAGGCATTCAGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SHATWIVTAISVPSKGLLQRAAS*RHSEAQ
Trigger: CTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTATATCCACAAACCCATaGAGATTACAGAGATATTCC +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPISTNP*RLQRYS
Trigger: GGAATATCTCTGTAATCTGCATGGGTTTGTGGATAT...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAATATCCACAAACCCATaGAGATTACAGAGATATTCC +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTISTNP*RLQRYS
Trigger: GGAATATCTCTGTAATCTGCATGGGTTTGTGGATAT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTTGTGGTGAAGAATGTTaGCTGGATTCCTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPCGEEC*LDSFHL
Trigger: TAGATGGAAGGAATCCAGGCAACATTCTTCACCACA...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTCACCTCCTATTTCATTaGCATTTAAAACCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: HEVMSPEGLWEGYDISDAHLLFH*HLKPSH
Trigger: ATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTG...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTGGACTAATGTTCACATaGTACTTGGATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TAFGNYASLSSDTATEEPGLMFT*YLDCHS
Trigger: GCTGTGACAATCCAAGTAGCATGTGAACATTAGTCC...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648271.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGTTGGAGCCACACGATaGCGAAAAACAATCACGAAA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELVGATR*RKTITK
Trigger: TTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAAC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: YFAPSGIHMAFTVPWGLLKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TCTTTAACAAACTGTAGCCAACCATCGTTCCCTACCTTTTTAGAGAACTTTTGTGAACCCCAGATCGGTTaGGTGGTCCTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: SLTNCSQPSFPTFLENFCEPQIG*VVLLMG
Trigger: ACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC...ACAAAAGTTCTCTAAAAAGGTAGGGAACGATGGTTGGCTACAGTTTGTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: RKDFGKAMTSLMLGDPVTRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...TGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCTATCAGTTCCATAGGTaGCCAGCACCTCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSYQFHR*PAPQQK
Trigger: CTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATA...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGCTTTCACAGTTCCATaGGGCTTACTAAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELAFTVP*GLLSAS
Trigger: AGATGCACTTAGTAAGCCCCATGGAACTGTGAAAGC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTTGGGCAGGAAGAGTaGGAAATCTACCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLGQEE*EIYHPK
Trigger: CTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGACATCTCTGATGCTTaGAGATCCAGTGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHDISDA*RSSDKA
Trigger: TGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISSPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAGGAGGGACAGAATCTaGGGTATTGCTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISRRDRI*GIAHEV
Trigger: GACCTCATGAGCAATACCCCAGATTCTGTCCCTCCT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTAGGAGGGACAGAATCTaGGGTATTGCTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: VTAISVPSKGLLKALKQIRRDRI*GIAHEV
Trigger: GACCTCATGAGCAATACCCCAGATTCTGTCCCTCCT...AATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAACACTAATCGCTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATTGTTCACATGCTACTTaGATTGTCACAGCGATTAGT +
Preference number: 4 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHCSHAT*IVTAIS
Trigger: ACTAATCGCTGTGACAATCCAAGTAGCATGTGAACA...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CAA 72 bp AAAGTCATAGTAGGAAAAGGAACAACCACAGGATCTTaGTCATTGGGCCAGGAATACTGGAGCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: KVIVGKGTTTGS*SLGQEYWSKPS
Trigger: TGAGGGTTTGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGTTCCTTTTCCTACTATGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACGATTTCGAGTCTTCTaGAAGAGGAAGGCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISRFRVF*KRKASK
Trigger: TTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISGKTSP*VLKHQS
Trigger: AGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISKPLYS*LNQEGK
Trigger: CTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCATTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTAFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATTTTGCCTTCGGTACTaGATCCATCCACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISFCLRY*IHPHKV
Trigger: CACCTTGTGTGGATGGATTCAGTACCGAAGGCAAAA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHLKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATATATCCACAAACCCATaGAGATTACAGAGATATTCC +
Preference number: 4 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHISTNP*RLQRYS
Trigger: GGAATATCTCTGTAATCTGCATGGGTTTGTGGATAT...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTGTGGTGAAGAATGTTaGCTGGATTCCTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELCGEEC*LDSFHL
Trigger: TAGATGGAAGGAATCCAGGCAACATTCTTCACCACA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGTTGGAGCCACACGATaGCGAAAAACAATCACGAAA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHVGATR*RKTITK
Trigger: TTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAAC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAA +
Preference number: 4 (lower is better)
Translates to: VTAISVPSKGLLKALKQIKGSTC*SHTMAK
Trigger: TTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTT...AATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAACACTAATCGCTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTACTCTCCACATGTGTTaGTCCGGACAACAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: VTAISVPSKGLLKALKQITLHMC*SGQQSY
Trigger: GTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGT...AATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAACACTAATCGCTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTRRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACATTTTCATGACCATCTaGGACCTCAGTCGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHIFMTI*DLSRRL
Trigger: TAACCTGCGACTGAGGTCCCAGATGGTCATGAAAAT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCTTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: VCLVLNLHLDNIGQPENILGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACAGGATCTTTGTCATTaGGCCAGGAATACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISQDLCH*ARNTGA
Trigger: TGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGTCCCCGGAAGGACTTTaGGAAGGCTATGACATCTCT +
Preference number: 4 (lower is better)
Translates to: VPSKGLLKALKQIQQCIWSPEGL*EGYDIS
Trigger: AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGA...CCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATGGAGTCTGTTGGCTTaGAGACTCGGATATGATAGG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISWSLLA*RLGYDR
Trigger: CCTATCATATCCGAGTCTCCAAGCCAACAGACTCCA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATGCTTTGGAGTCTGTTaGCTTGGAGACTCGGATATG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISCFGVC*LGDSDM
Trigger: CATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCTTCTCATGGAACTCTTaGACTCATCCTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSFSWNS*THPSTS
Trigger: AGAGGTGGAAGGATGAGTCCAAGAGTTCCATGAGAA...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648271.1
3UTR CAA 72 bp CTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTaGGTGCTTGGCAGGGAACTCCATAAACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LTKGPKTDSTVY*VLGRELHKHRR
Trigger: CCTTCTGTGTTTATGGAGTTCCCTGCCAAGCACCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp AAAGTGAGTAACCATGGCAATCAGAAGGACACTGGCATCTTCCTGTTTTCATACGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KVSNHGNQKDTGIFLFSYGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...GTATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTGCCATGGTTACTCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTGTCTGTCTGGTCTTaGACCTTCATCTCGATAACA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLSVWS*TFISIT
Trigger: TGTTATCGAGATGAAGGTTCAAGACCAGACAGACAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAGTCTGGTCTACAAATaGCATCTCTATGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELSLVYK*HLYVNL
Trigger: CAGATTGACATAGAGATGTCATTTGTAGACCAGACT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCTTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTACCTCTGTCCTAAGTaGATAATCTACTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELYLCPK*IIYYLG
Trigger: ACCCAGATAGTAGATTATTCACTTAGGACAGAGGTA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTGGGGAATGATAACTTaGACAAGCCCATCGAAATCT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHWGMIT*TSPSKS
Trigger: AGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGTTTTGCCTTCGGTACTaGATCCATCCACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPSKGLLKALKQIQQCIWFCLRY*IHPHKV
Trigger: CACCTTGTGTGGATGGATTCAGTACCGAAGGCAAAA...CCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649067.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACATATCCACAAACCCATaGAGATTACAGAGATATTCC +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHISTNP*RLQRYS
Trigger: GGAATATCTCTGTAATCTGCATGGGTTTGTGGATAT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp AACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: NIMEQCFPDSNECVCEAMKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...CATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAACACCTCCTATTTCATTaGCATTTAAAACCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQHLLFH*HLKPSH
Trigger: ATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTG...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGTTGGAGCCACACGATaGCGAAAAACAATCACGAAA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISVGATR*RKTITK
Trigger: TTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAAC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAACCTGTTGGCATTTTTaGATTCTCTTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISTCWHF*ILLSCR
Trigger: CCTGCAGGACAAGAGAATCCAAAAATGCCAACAGGT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CATTTTCACATCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: HFHILCSFRDTYGFHSSMTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...CATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGATGTGAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISPSIKL*IPVWST
Trigger: TGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TCTTTAACAAACTGTAGCCAACCATCGTTCCCTACCTTTTTAGAGAACTTTTGTCTTGGGCAGGAAGAGTaGGAAATCTACCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: SLTNCSQPSFPTFLENFCLGQEE*EIYHPK
Trigger: CTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAG...ACAAAAGTTCTCTAAAAAGGTAGGGAACGATGGTTGGCTACAGTTTGTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CAA 72 bp ATAGTAGGAAAAGGAACAACCACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: IVGKGTTTGSLS*GQEYWSKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGTTCCTTTTCCTACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGGACAACAAAGCTACTaGATTCTGGAATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISGQQSY*ILEFSS
Trigger: AGAGGAGAATTCCAGAATTCAGTAGCTTTGTTGTCC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATCTGCATGGTATGCATaGTTCAATGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISSAWYA*FNELFL
Trigger: CAGAAAGAGCTCATTGAATCATGCATACCATGCAGA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATTCCATCTAAAGACTTaGTTGTTAGACCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISFHLKT*LLDLWQ
Trigger: CTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCTACCTCTGTCCTAAGTaGATAATCTACTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSYLCPK*IIYYLG
Trigger: ACCCAGATAGTAGATTATTCACTTAGGACAGAGGTA...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
CDS-3UTR TCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCTACCTCTGTCCTAAGTaGATAATCTACTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFYLCPK*IIYYLG
Trigger: ACCCAGATAGTAGATTATTCACTTAGGACAGAGGTA...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATGGGGAATGATAACTTaGACAAGCCCATCGAAATCT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISWGMIT*TSPSKS
Trigger: AGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCTACTCTTCCTTGCTTTaGCAAAACAAGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFYSSLL*QNKQSE
Trigger: CTCACTTTGCTTGTTTTGTCAAAGCAAGGAAGAGTA...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648271.1
CDS-3UTR GCA 90 bp TTTAAGTATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCCTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: FKYFAPSGIHMAFTVPWGLKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCCTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFLKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAGTCGCAGGTTATACTaGATTTGGAAACTACGCAAG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISSRRLY*IWKLRK
Trigger: CTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATCAATGAGCTCTTTCTaGTTTGGAGTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISSMSSF*FGVCWL
Trigger: AAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp GTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTTGTGGTGAAGAATGTTaGCTGGATTCCTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: VTAISVPSKGLLKALKQICGEEC*LDSFHL
Trigger: TAGATGGAAGGAATCCAGGCAACATTCTTCACCACA...AATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAACACTAATCGCTGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCATTTTCACATCCTCTaGTCCTTCAGGGATACATAT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHHFHIL*SFRDTY
Trigger: ATATGTATCCCTGAAGGAGCAGAGGATGTGAAAATG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR GCA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTAGGACTAATGTTCACATaGTACTTGGATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SHATWIVTAISVPSKGLLGLMFT*YLDCHS
Trigger: GCTGTGACAATCCAAGTAGCATGTGAACATTAGTCC...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGGTTGGAGCCACACGATaGCGAAAAACAATCACGAAA +
Preference number: 4 (lower is better)
Translates to: VPSKGLLKALKQIQQCIWVGATR*RKTITK
Trigger: TTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAAC...CCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATACCTCTGTCCTAAGTaGATAATCTACTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISYLCPK*IIYYLG
Trigger: ACCCAGATAGTAGATTATTCACTTAGGACAGAGGTA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR TCA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTATACTCTTCCTTGCTTTaGCAAAACAAGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: SHATWIVTAISVPSKGLLYSSLL*QNKQSE
Trigger: CTCACTTTGCTTGTTTTGTCAAAGCAAGGAAGAGTA...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR TCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAATTTTCACATCCTCCTaGTTAAAATGGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISIFTSS*LKWSAA
Trigger: TGCAGCTGACCATTTTAATCAGGAGGATGTGAAAAT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648960.1
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTTAAAGCATCAGTCTaGACTTCTACTCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLKASV*TSTQQV
Trigger: GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCATATCCACAAACCCATaGAGATTACAGAGATATTCC +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFISTNP*RLQRYS
Trigger: GGAATATCTCTGTAATCTGCATGGGTTTGTGGATAT...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACATATCCACAAACCCATaGAGATTACAGAGATATTCC +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHISTNP*RLQRYS
Trigger: GGAATATCTCTGTAATCTGCATGGGTTTGTGGATAT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp AAAGTGAGTAACCATGGCAATCAGAAGGACACTGGCATCTTCCTGTTTTCATACATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: KVSNHGNQKDTGIFLFSYMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...GTATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTGCCATGGTTACTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: VAGYTAFGNYASLSSDTAKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR GCA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCACCTCCTATTTCATTaGCATTTAAAACCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELHLLFH*HLKPSH
Trigger: ATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
3UTR CAA 72 bp GGATATAACGCTGCAGCTCTGCATTGTGAATTCGAATaGAACCACCTCCTATTTCATTGCCATTTAAAACCA +
Preference number: 4 (lower is better)
Translates to: GYNAAALHCEFE*NHLLFHCHLKP
Trigger: TGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGCTGCAGCGTTATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR GCA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGAATGGGGCTTACTAAGTaGATCTTGAAGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRMGLTK*ILKKSN
Trigger: ATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCAT...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp TTTAAGTATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: FKYFAPSGIHMAFTVPWGKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR GCA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCACCTCCTATTTCATTaGCATTTAAAACCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHHLLFH*HLKPSH
Trigger: ATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGAAGGTTATACTGCATTTaGAAACTACGCAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRRLYCI*KLRKSK
Trigger: CTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCT...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp GTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: VPSKGLLKALKQIQQCIWTFQVP*MVLKTL
Trigger: AAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...CCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TCTTTAACAAACTGTAGCCAACCATCGTTCCCTACCTTTTTAGAGAACTTTTGTTTGGGCCAGGAATACTaGAGCAAACCCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: SLTNCSQPSFPTFLENFCLGQEY*SKPSIK
Trigger: TTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAA...ACAAAAGTTCTCTAAAAAGGTAGGGAACGATGGTTGGCTACAGTTTGTTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CCA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGAAAACTTACATTCTCATaGAACTCTTGGACTCATCCT +
Preference number: 4 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRKLTFS*NSWTHP
Trigger: AGGATGAGTCCAAGAGTTCCATGAGAATGTAAGTTT...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
3UTR CAA 72 bp AAAGTATTCAGGACTAATGTTCACATGCTACTTGGATaGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: KVFRTNVHMLLG*SQRLVFLVKAY
Trigger: GTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAAAAGCTCAACTTTCTaGATGGTATGCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISKSSTF*MVCMIQ
Trigger: TTGAATCATGCATACCATGCAGAAAGTTGAGCTTTT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CCA 90 bp TCTTTAACAAACTGTAGCCAACCATCGTTCCCTACCTTTTTAGAGAACTTTTGTTGTTCACATGCTACTTaGATTGTCACAGCGATTAGT +
Preference number: 4 (lower is better)
Translates to: SLTNCSQPSFPTFLENFCCSHAT*IVTAIS
Trigger: ACTAATCGCTGTGACAATCCAAGTAGCATGTGAACA...ACAAAAGTTCTCTAAAAAGGTAGGGAACGATGGTTGGCTACAGTTTGTTAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR GCA 90 bp CTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTGCCATTTAAAACCACACCTCCTATTTCATTaGCATTTAAAACCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LHCEFELNHLLFHCHLKPHLLFH*HLKPSH
Trigger: ATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTG...TGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCGAAGGGAAGTACATGTaGGAGCCACACGATGGCGAA +
Preference number: 5 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSEGKYM*EPHDGE
Trigger: TTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTC...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS CCA 90 bp GGTACCTTTTTGGGCTCAGTGTACAGGAGATGTATGTCACTGGGGTaGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: GTFLGSVYRRCMSLG*GAVNGWWADSSSLG
Trigger: TCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTGAGCCCAAAAAGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650297.1
CDS-3UTR CAA 90 bp AGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCGAAGGGAAGTACATGTaGGAGCCACACGATGGCGAA +
Preference number: 5 (lower is better)
Translates to: RRCMSLGWGAVNGWWADSEGKYM*EPHDGE
Trigger: TTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTC...GGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGAGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRGAPLL*FLEGQH
Trigger: GTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCC...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGACTCCTCCGCACAACATaGGAGTACACGTGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRLLRTT*EYTCLE
Trigger: TTCTAGACACGTGTACTCCAATGTTGTGCGGAGGAG...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGLGFSS*GRKSGK
Trigger: TTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAG...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCTTCACATCCTCCTTTTaGGGCTCAGTGTACAGGAGA +
Preference number: 5 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSFTSSF*GSVYRR
Trigger: TCTCCTGTACACTGAGCCCAAAAAGGAGGATGTGAA...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471476.2
CDS-3UTR CAA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp AGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCCACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RRCMSLGWGAVNGWWADSHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...GGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGAGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 5 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWGAPLL*FLEGQH
Trigger: GTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCC...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS TCA 90 bp CTCTGGGGTGCTTGCTGGGGTGGAGATAAGGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCTGCACTTCTACTCAACAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LWGACWGGDKGKTSP*VLKHQSALLLNKSA
Trigger: TGCCGACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCCCTTATCTCCACCCCAGCAAGCACCCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS TCA 90 bp GGTTGGGTGGTCCTTCTGATGGGTCTGGATAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAGTACATGTTGGAGCCACACGATGGC +
Preference number: 5 (lower is better)
Translates to: GWVVLLMGLDKPLYS*LNQEGKYMLEPHDG
Trigger: GCCATCGTGTGGCTCCAACATGTACTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTTATCCAGACCCATCAGAAGGACCACCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS TCA 90 bp TCGCGTTTCAAATCTCGCAGACCTGCTGGCCGATTTCGAGTCTTCTaGAAGAGGAAGGCGAGCAAAGCCAAAATTCTCCCAGAGCGCGAA +
Preference number: 5 (lower is better)
Translates to: SRFKSRRPAGRFRVF*KRKASKAKILPERE
Trigger: TTCGCGCTCTGGGAGAATTTTGGCTTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTGAAACGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACCACTCCTCTTGTCTCCTCCGCACAACATaGGAGTACACGTGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: YHPKEREQSGVTEHHSSCLLRTT*EYTCLE
Trigger: TTCTAGACACGTGTACTCCAATGTTGTGCGGAGGAG...ACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: HEVMSPEGLWEGYDISDAGAPLL*FLEGQH
Trigger: GTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCC...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGACACATGCTACTTGGATaGTCACAGCGATTAGTGTTC +
Preference number: 5 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRHMLLG*SQRLVF
Trigger: GAACACTAATCGCTGTGACAATCCAAGTAGCATGTG...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648271.1
CDS TCA 90 bp TTCACAGAGGCTGCCGACTTCGGTACTGAATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAGACGAACGCAACTCTCCACATGTGT +
Preference number: 5 (lower is better)
Translates to: FTEAADFGTESIHTR*LLGLSETNATLHMC
Trigger: ACACATGTGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGATTCAGTACCGAAGTCGGCAGCCTCTGTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS TCA 90 bp CTTCGAAACTACCTACTGGATTCTCTTGTCCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCACCACAGATTCCACAGGGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LRNYLLDSLVLQDGK*LYQTLAPQIPQGLH
Trigger: GTGAAGCCCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTAGTTTCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS GCA 90 bp ACCGGAAAACAAGGAGTAACAGTCGCGTTTCAAATCTCGCAGACCTaGTGGCCGATTTCGAGTCTTCTGAAAGAGGAAGGCGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: TGKQGVTVAFQISQT*WPISSLLKEEGEQS
Trigger: GCTTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTGAAACGCGACTGTTACTCCTTGTTTTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 5 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 5 (lower is better)
Translates to: SGVLLMRSCPRKDFGKAMAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...CATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACTGGCTACGGGCCTTTTaGGGCTCAGTGTACAGGAGA +
Preference number: 5 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYWLRAF*GSVYRR
Trigger: TCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCA...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAATGGCTACGGGCCTTTTaGGGCTCAGTGTACAGGAGA +
Preference number: 5 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQWLRAF*GSVYRR
Trigger: TCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCA...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTAACCAAGTCATAGTGTaGGCTACGGGCCTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: HEVMSPEGLWEGYDISDANQVIV*ATGLFG
Trigger: CCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTT...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS TCA 90 bp ACAGACTTCTGTAGAGAGAACCCCAGATCGGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCCTGTACAGCTGACTTAACCAAGAAG +
Preference number: 5 (lower is better)
Translates to: TDFCRENPRSVGWSF*WVWINPCTADLTKK
Trigger: CTTCTTGGTTAAGTCAGCTGTACAGGGGTTTATCCAGACCCATCAGAAGGACCACCCAACCGATCTGGGGTTCTCTCTACAGAAGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS CCA 90 bp GGAAAACAAGGAGTAACAGTCGCGTTTCAAATCTCGCAGACCTGCTaGCCGATTTCGAGTCTTCTGAAAGAGGAAGGCGAGCAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: GKQGVTVAFQISQTC*PISSLLKEEGEQSQ
Trigger: TTGGCTTTGCTCGCCTTCCTCTTTCAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTGAAACGCGACTGTTACTCCTTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTCTCCTCCGCACAACATaGGAGTACACGTGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLLLRTT*EYTCLE
Trigger: TTCTAGACACGTGTACTCCAATGTTGTGCGGAGGAG...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp AACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGAAGGGAAGTACATGTaGGAGCCACACGATGGCGAA +
Preference number: 5 (lower is better)
Translates to: NIMEQCFPDSNECVCEAMEGKYM*EPHDGE
Trigger: TTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTC...CATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CATTTTCACATCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: HFHILCSFRDTYGFHSSMRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...CATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGATGTGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAAACTCTCCACATGTGTaGGTCCGGACAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGNSPHV*VRTTKL
Trigger: TAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTT...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTAACTCTCCACATGTGTaGGTCCGGACAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: HEVMSPEGLWEGYDISDANSPHV*VRTTKL
Trigger: TAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTT...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGACACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp GGGTGGGGAGCAGTAAATGGGTGGTGGGCCGATTCCAGCTCTCTGGGATTTTCCTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: GWGAVNGWWADSSSLGFSFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...GGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 5 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRTTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAAGAGCATGCTTTATaGTGCTCTCCAGCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGKEHAL*CSPAVS
Trigger: ACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTT...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp AGGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGCTGGGGAATGATAACTaGAACAAGCCCATCGAAATC +
Preference number: 5 (lower is better)
Translates to: RDRIWGIAHEVMSPEGLWLGNDN*NKPIEI
Trigger: GATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAG...CCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649067.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTGGCTACGGGCCTTTTaGGGCTCAGTGTACAGGAGA +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHWLRAF*GSVYRR
Trigger: TCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGACCTCCTTTAGTAAGGTaGCCAGGATATAACGCTGCA +
Preference number: 5 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRPPLVR*PGYNAA
Trigger: TGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGG...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647730.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACATTCTCATGGAACTCTaGGACTCATCCTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDILMEL*DSSFHL
Trigger: GAGGTGGAAGGATGAGTCCAAGAGTTCCATGAGAAT...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGACAGTGTATTTGGTGCTaGGCAGGGAACTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: CWLGDSDMIGLQFLRRDRQCIWC*AGNSIN
Trigger: GTTTATGGAGTTCCCTGCCAAGCACCAAATACACTG...TCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTGATTCAACAGTGTATTaGGTGCTTGGCAGGGAACTC +
Preference number: 5 (lower is better)
Translates to: HEVMSPEGLWEGYDISDADSTVY*VLGREL
Trigger: GAGTTCCCTGCCAAGCACCAAATACACTGTTGAATC...AGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGAAGGGAAGTACATGTaGGAGCCACACGATGGCGAA +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHEGKYM*EPHDGE
Trigger: TTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAACCGAAGAGCCTGAAGGGAAGTACATGTaGGAGCCACACGATGGCGAA +
Preference number: 5 (lower is better)
Translates to: TAFGNYASLSSDTATEEPEGKYM*EPHDGE
Trigger: TTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTC...AGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCTTACTAAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: YFAPSGIHMAFTVPWGLLRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...TAGTAAGCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTAACTCTCCACATGTGTaGGTCCGGACAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLNSPHV*VRTTKL
Trigger: TAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTT...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 5 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTCACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 5 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp AACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: NIMEQCFPDSNECVCEAMTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...CATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTCACATCCTCTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 5 (lower is better)
Translates to: FTSSAPSGIHMAFTVPWGTTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAGAGGATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647788.1
CDS-3UTR CAA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGACTTACTAAGTGCATCTaGAAGAAATCCAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRLTKCI*KKSNLC
Trigger: ACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAG...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGCATACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: DFGKAMTSLMLGDPVTRHTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...ATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACCTGCTTTGGAGTCTGTaGGCTTGGAGACTCGGATAT +
Preference number: 5 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYLLWSL*AWRLGY
Trigger: ATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTCTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: ESGVLLMRSCPRKDFGKALPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...AGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTGGCTACGGGCCTTTTaGGGCTCAGTGTACAGGAGA +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELWLRAF*GSVYRR
Trigger: TCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GTACAGGAGATGTATGTCACTGGGGTGGGGAGCAGTAAATGGGTGGTGGGCCGACATTGTGAATTCGAATaGAACCACCTCCTATTTCAT +
Preference number: 5 (lower is better)
Translates to: VQEMYVTGVGSSKWVVGRHCEFE*NHLLFH
Trigger: ATGAAATAGGAGGTGGTTCAATTCGAATTCACAATG...TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCCCTCCTTTAGTAAGGTaGCCAGGATATAACGCTGCA +
Preference number: 5 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTPPLVR*PGYNAA
Trigger: TGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGG...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS TCA 90 bp CCAAGAATGTGTTTTGCCTTCGGTACTGAATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAGACGAACGCAACTCTCCACATGTGT +
Preference number: 5 (lower is better)
Translates to: PRMCFAFGTESIHTR*LLGLSETNATLHMC
Trigger: ACACATGTGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGATTCAGTACCGAAGGCAAAACACATTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000647645.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS CCA 90 bp ATAAACCCCTGTACAGCTGACTTAACCAAGAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAAAACAATCACGAAATCCCACGCTGC +
Preference number: 5 (lower is better)
Translates to: INPCTADLTKKGSTC*SHTMAKNNHEIPRC
Trigger: GCAGCGTGGGATTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 5 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CTGCTTTGGAGTCTGTTGGCTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: LLWSLLAWRLGYDRASVPANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...AGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GGGACAGAATCTGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTGGGCTTACTAAGTGCATCTaGAAGAAATCCAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: GTESGVLLMRSCPRKDFGLTKCI*KKSNLC
Trigger: ACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAG...CCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp GTCGCAGGTTATACTGCATTTGGAAACTACGCAAGTCTAAGTAGCGATACTGCAGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: VAGYTAFGNYASLSSDTAGAPLL*FLEGQH
Trigger: GTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCC...TGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLGFSS*GRKSGK
Trigger: TTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VCLVLNLHLDNIGQPENILGFSS*GRKSGK
Trigger: TTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAG...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp AGAGTGGGAAATCTACCACCCAAAGGAAAGAGAACAGAGTGGGGTCACGGAGCACTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RVGNLPPKGKRTEWGHGALPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...TGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp AGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGACTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RSCPRKDFGKAMTSLMLGLPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...TCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCTGGCTACGGGCCTTTTaGGGCTCAGTGTACAGGAGA +
Preference number: 5 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSWLRAF*GSVYRR
Trigger: TCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCA...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAACCAAGTCATAGTGTaGGCTACGGGCCTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHNQVIV*ATGLFG
Trigger: CCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp AGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGGGATTTGAACAACCTCCTTTAGTAAGGTaGCCAGGATATAACGCTGCA +
Preference number: 5 (lower is better)
Translates to: SAFQTPMSAYVRPWGFEQPPLVR*PGYNAA
Trigger: TGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGG...TTGTTCAAATCCCCATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp ATGAGGTCATGTCCCCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTCACATGCTACTTGGATaGTCACAGCGATTAGTGTTC +
Preference number: 5 (lower is better)
Translates to: MRSCPRKDFGKAMTSLMLHMLLG*SQRLVF
Trigger: GAACACTAATCGCTGTGACAATCCAAGTAGCATGTG...AAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTCCTCCGCACAACATaGGAGTACACGTGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLLRTT*EYTCLE
Trigger: TTCTAGACACGTGTACTCCAATGTTGTGCGGAGGAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCCTCCTCCGCACAACATaGGAGTACACGTGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: VCLVLNLHLDNIGQPENILLRTT*EYTCLE
Trigger: TTCTAGACACGTGTACTCCAATGTTGTGCGGAGGAG...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGAAGGGAAGTACATGTaGGAGCCACACGATGGCGAA +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHEGKYM*EPHDGE
Trigger: TTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GTCTGTCTGGTCTTGAACCTTCATCTCGATAACATCGGGCAACCTGAAAATATCTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: VCLVLNLHLDNIGQPENISKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...GATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp CAGAGATATTCCCGCATTTTCATGACCATCTGGGACCTCAGTCGCAGGTTATACGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: QRYSRIFMTIWDLSRRLYANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...GTATAACCTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp AACATTATGGAGCAGTGCTTTCCAGACTCCAATGAGTGCGTATGTGAGGCCATGGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: NIMEQCFPDSNECVCEAMANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...CATGGCCTCACATACGCACTCATTGGAGTCTGGAAAGCACTGCTCCATAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CCGGAAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACGAATTCCAGTTTCTATaGGCGTTAAGGAATACAGGT +
Preference number: 5 (lower is better)
Translates to: PEGLWEGYDISDAWRSSDEFQFL*ALRNTG
Trigger: ACCTGTATTCCTTAACGCCAATAGAAACTGGAATTC...GTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLGFSS*GRKSGK
Trigger: TTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTGCTTTGGAGTCTGTaGGCTTGGAGACTCGGATAT +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLLWSL*AWRLGY
Trigger: ATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTCTGCTTTGGAGTCTGTaGGCTTGGAGACTCGGATAT +
Preference number: 5 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLLLWSL*AWRLGY
Trigger: ATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAACCAAGTCATAGTGTaGGCTACGGGCCTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELNQVIV*ATGLFG
Trigger: CCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACATTCTCATGGAACTCTaGGACTCATCCTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHILMEL*DSSFHL
Trigger: GAGGTGGAAGGATGAGTCCAAGAGTTCCATGAGAAT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649067.1
CDS TCA 90 bp TGTCTTTCTCAATTTACCTTCGGTACTGAATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAGACGAACGCAACTCTCCACATGTGT +
Preference number: 5 (lower is better)
Translates to: CLSQFTFGTESIHTR*LLGLSETNATLHMC
Trigger: ACACATGTGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGATTCAGTACCGAAGGTAAATTGAGAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGAAGGGAAGTACATGTaGGAGCCACACGATGGCGAA +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISEGKYM*EPHDGE
Trigger: TTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTGCCATTTAAAACCAAGAACCCCAGATCGGTaGGGTGGTCCTTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LHCEFELNHLLFHCHLKPRTPDR*GGPSDG
Trigger: CCCATCAGAAGGACCACCCAACCGATCTGGGGTTCT...TGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAACTCTCCACATGTGTaGGTCCGGACAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELNSPHV*VRTTKL
Trigger: TAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CTTGGAGACTCGGATATGATAGGGCTTCAGTTCCTCAGGAGGGACAGAATCTGGTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: LGDSDMIGLQFLRRDRIWFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...CCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACACAGGATCTTTGTCATaGGGCCAGGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHTGSLS*GQEYWS
Trigger: GCTCCAGTATTCCTGGCCCAATGACAAAGATCCTGT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 5 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLTTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CTAAGGCAATTCCTCCATGAGGGGGTGCCCCATAATCTAAAGCCTGGAGCAGATCTTACTAAGTGCATCTaGAAGAAATCCAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: LRQFLHEGVPHNLKPGADLTKCI*KKSNLC
Trigger: ACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAG...ATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGGAGCACCACTCCTCTaGTTTCTAGAAGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISGAPLL*FLEGQH
Trigger: GTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTTAAGTATTTTGCTCCTTCAGGGATACATATGGCTTTCACAGTTCCATGGGGCACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: FKYFAPSGIHMAFTVPWGTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...GCCCCATGGAACTGTGAAAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCCTGCTTTGGAGTCTGTaGGCTTGGAGACTCGGATAT +
Preference number: 5 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSLLWSL*AWRLGY
Trigger: ATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTGCTTTGGAGTCTGTaGGCTTGGAGACTCGGATAT +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLLWSL*AWRLGY
Trigger: ATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCTGGGGAATGATAACTaGAACAAGCCCATCGAAATC +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHLGNDN*NKPIEI
Trigger: GATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GGACACTGGCATCTTCCTGTTTTCATACAAGCTGAACATTATGGAGCAGTGCTTCAGTGTATTTGGTGCTaGGCAGGGAACTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: GHWHLPVFIQAEHYGAVLQCIWC*AGNSIN
Trigger: GTTTATGGAGTTCCCTGCCAAGCACCAAATACACTG...AAGCACTGCTCCATAATGTTCAGCTTGTATGAAAACAGGAAGATGCCAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS GCA 90 bp AATTACACAGATATCTTCGAAACTACCTACTGGATTCTCTTGTCCTaGAGGACGGGAAATGACTGTACCAGACACTTGCACCACAGATTC +
Preference number: 5 (lower is better)
Translates to: NYTDIFETTYWILLS*RTGNDCTRHLHHRF
Trigger: GAATCTGTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTAGTTTCGAAGATATCTGTGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS CCA 90 bp TTGTCATTGGGCCAGGAATACTGGAGCAAACCCTCAATTAAACTCTaGATCCCAGTCTGGTCTACAAATGACATCTCTATGTCAATCCCT +
Preference number: 5 (lower is better)
Translates to: LSLGQEYWSKPSIKL*IPVWSTNDISMSIP
Trigger: AGGGATTGACATAGAGATGTCATTTGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649106.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACAACTCTCCACATGTGTaGGTCCGGACAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHNSPHV*VRTTKL
Trigger: TAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATCAAAGGGCAGCTTCTaGCAGGCATTCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISSKGSF*QAFRSS
Trigger: TGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp AAAGTGAGTAACCATGGCAATCAGAAGGACACTGGCATCTTCCTGTTTTCATACGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 5 (lower is better)
Translates to: KVSNHGNQKDTGIFLFSYAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...GTATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTGCCATGGTTACTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACGCTGTCTGTCTGGTCTaGAACCTTCATCTCGATAAC +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHAVCLV*NLHLDN
Trigger: GTTATCGAGATGAAGGTTCAAGACCAGACAGACAGC...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHTTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTTGGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCCTTACTAAGTGCATCTaGAAGAAATCCAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: FGFSCPAGREMTVPDTCTLTKCI*KKSNLC
Trigger: ACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAG...GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp AAGGACTTTGGGAAGGCTATGACATCTCTGATGCTTGGAGATCCAGTGACAAGGGAATTCCAGTTTCTATaGGCGTTAAGGAATACAGGT +
Preference number: 5 (lower is better)
Translates to: KDFGKAMTSLMLGDPVTREFQFL*ALRNTG
Trigger: ACCTGTATTCCTTAACGCCAATAGAAACTGGAATTC...CCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACAAAGAGCATGCTTTATaGTGCTCTCCAGCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHKEHAL*CSPAVS
Trigger: ACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTT...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GTTCCTAGTAAAGGCTTACTAAAGGCCCTAAAACAGATTCAACAGTGTATTTGGCTGGGATTTTCCTCCTaGGGCAGGAAGAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VPSKGLLKALKQIQQCIWLGFSS*GRKSGK
Trigger: TTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAG...CCAAATACACTGTTGAATCTGTTTTAGGGCCTTTAGTAAGCCTTTACTAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAACAGAATCTGGGGTATaGCTCATGAGGTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISTESGV*LMRSCP
Trigger: GGGACATGACCTCATGAGCAATACCCCAGATTCTGT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTGCTTTGGAGTCTGTaGGCTTGGAGACTCGGATAT +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLLWSL*AWRLGY
Trigger: ATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTACTGCTTTGGAGTCTGTaGGCTTGGAGACTCGGATAT +
Preference number: 5 (lower is better)
Translates to: SHATWIVTAISVPSKGLLLLWSL*AWRLGY
Trigger: ATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAG...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHLPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp AAAGTGAGTAACCATGGCAATCAGAAGGACACTGGCATCTTCCTGTTTTCATACGATTCAACAGTGTATTaGGTGCTTGGCAGGGAACTC +
Preference number: 5 (lower is better)
Translates to: KVSNHGNQKDTGIFLFSYDSTVY*VLGREL
Trigger: GAGTTCCCTGCCAAGCACCAAATACACTGTTGAATC...GTATGAAAACAGGAAGATGCCAGTGTCCTTCTGATTGCCATGGTTACTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS GCA 90 bp GCAGCTCTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTaGCATTTAAAACCAAGTCATAGTGTTGGCTACGGGCCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: AALHCEFELNHLLFH*HLKPSHSVGYGPRR
Trigger: TCTTCTAGGCCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650297.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TCACATGCTACTTGGATTGTCACAGCGATTAGTGTTCCTAGTAAAGGCTTACTACACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SHATWIVTAISVPSKGLLHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...TAGTAAGCCTTTACTAGGAACACTAATCGCTGTGACAATCCAAGTAGCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTGTTGGCATTTTaGGATTCTCTTGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISHLLAF*DSLVLQ
Trigger: CTGCAGGACAAGAGAATCCAAAAATGCCAACAGGTG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISTTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACGAATTCCAGTTTCTATaGGCGTTAAGGAATACAGGT +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHEFQFL*ALRNTG
Trigger: ACCTGTATTCCTTAACGCCAATAGAAACTGGAATTC...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCAAAGAGCATGCTTTATaGTGCTCTCCAGCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELKEHAL*CSPAVS
Trigger: ACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTT...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCCTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELLPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACCTGGGGAATGATAACTaGAACAAGCCCATCGAAATC +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHLGNDN*NKPIEI
Trigger: GATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAG...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACCTCCTTTAGTAAGGTaGCCAGGATATAACGCTGCA +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISPPLVR*PGYNAA
Trigger: TGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS CCA 90 bp GAACTCTTCAGTCTTAGTAAGCCCAGTATCATTTCAGTCCACTGGTaGATCAAGCTTCGTTGTTATACCCTTCAACAGATGTTACTGAGA +
Preference number: 5 (lower is better)
Translates to: ELFSLSKPSIISVHW*IKLRCYTLQQMLLR
Trigger: TCTCAGTAACATCTGTTGAAGGGTATAACAACGAAGCTTGATCCACCAGTGGACTGAAATGATACTGGGCTTACTAAGACTGAAGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS CCA 90 bp ATGCATACAAGCAAAAATTACACAGATATCTTCGAAACTACCTACTaGATTCTCTTGTCCTGCAGGACGGGAAATGACTGTACCAGACAC +
Preference number: 5 (lower is better)
Translates to: MHTSKNYTDIFETTY*ILLSCRTGNDCTRH
Trigger: GTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTAGTTTCGAAGATATCTGTGTAATTTTTGCTTGTATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACATTTTTGGATTCTCTaGTCCTGCAGGACGGGAAAT +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISHFWIL*SCRTGN
Trigger: ATTTCCCGTCCTGCAGGACAAGAGAATCCAAAAATG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCAGCCAACCATCAGAAGTaGCTTAAACTGTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISANHQK*LKLLRT
Trigger: AGTCCTCAACAGTTTAAGCAACTTCTGATGGTTGGC...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCGAATTCCAGTTTCTATaGGCGTTAAGGAATACAGGT +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELEFQFL*ALRNTG
Trigger: ACCTGTATTCCTTAACGCCAATAGAAACTGGAATTC...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000648271.1
ENST00000649689.2
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACAAAGAGCATGCTTTATaGTGCTCTCCAGCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHKEHAL*CSPAVS
Trigger: ACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTT...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000649689.2
CDS-3UTR CAA 90 bp GTAGCGATACTGCAACCGAAGAGCCTCTGTTTTCTTCACGAAGTTCTTAATTTCCTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: VAILQPKSLCFLHEVLNFLPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...GAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTGGGGAATGATAACTaGAACAAGCCCATCGAAATC +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLGNDN*NKPIEI
Trigger: GATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TCTTTAACAAACTGTAGCCAACCATCGTTCCCTACCTTTTTAGAGAACTTTTGTAACCAAGTCATAGTGTaGGCTACGGGCCTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: SLTNCSQPSFPTFLENFCNQVIV*ATGLFG
Trigger: CCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTT...ACAAAAGTTCTCTAAAAAGGTAGGGAACGATGGTTGGCTACAGTTTGTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp TTAGCAGGAAGGGAGGCTAAGCGAGGTTTATGTAACTTACTCAGGCTGAAACACCATTGTGAATTCGAATaGAACCACCTCCTATTTCAT +
Preference number: 5 (lower is better)
Translates to: LAGREAKRGLCNLLRLKHHCEFE*NHLLFH
Trigger: ATGAAATAGGAGGTGGTTCAATTCGAATTCACAATG...GTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647645.1
ENST00000647730.1
ENST00000648807.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp TTGCCTGGATTCCTTCCATCTAAAGACTTGATTGTTAGACCTGTGGCAGAACTCTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: LPGFLPSKDLIVRPVAELFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...GAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTGCCATTTAAAACCAACAACCACAGGATCTTaGTCATTGGGCCAGGAATAC +
Preference number: 5 (lower is better)
Translates to: LHCEFELNHLLFHCHLKPTTTGS*SLGQEY
Trigger: GTATTCCTGGCCCAATGACAAAGATCCTGTGGTTGT...TGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGAAAAGAGCATGCTTTATaGTGCTCTCCAGCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRKEHAL*CSPAVS
Trigger: ACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTT...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648271.1
CDS-3UTR CAA 90 bp TTCTTCACGAAGTTCTTAATTTCAAAGGGCAGCTTCTTGCAGGCATTCAGAAGCTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: FFTKFLISKGSFLQAFRSFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...GCTTCTGAATGCCTGCAAGAAGCTGCCCTTTGAAATTAAGAACTTCGTGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS-3UTR CAA 90 bp ATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACACTTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: MLHQLTSLQGQAFSYISHFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...GTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS GCA 90 bp ATGTCCAGTCATGTGTTGCCAGAATGTGTACACAGATGGTGCAAATaGATACAAGCAAAAATTACACAGATATCTTCGAAACTACCTACT +
Preference number: 5 (lower is better)
Translates to: MSSHVLPECVHRWCK*IQAKITQISSKLPT
Trigger: AGTAGGTAGTTTCGAAGATATCTGTGTAATTTTTGCTTGTATGCATTTGCACCATCTGTGTACACATTCTGGCAACACATGACTGGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS GCA 90 bp TGCCTAATGTCCAGTCATGTGTTGCCAGAATGTGTACACAGATGGTaGAAATGCATACAAGCAAAAATTACACAGATATCTTCGAAACTA +
Preference number: 5 (lower is better)
Translates to: CLMSSHVLPECVHRW*KCIQAKITQISSKL
Trigger: TAGTTTCGAAGATATCTGTGTAATTTTTGCTTGTATGCATTTGCACCATCTGTGTACACATTCTGGCAACACATGACTGGACATTAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCATTTCAATCTCACCTGTaGGCATTTTTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISFQSHL*AFLDSL
Trigger: AAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAA...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CAAATGCTCCATCAACTCACTAGTTTACAGGGGCAAGCATTTTCCTACATTTCACTTACTAAGTGCATCTaGAAGAAATCCAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: QMLHQLTSLQGQAFSYISLTKCI*KKSNLC
Trigger: ACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAG...TGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS-3UTR CAA 90 bp CTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTGCCATTTAAAACCACTTCCATCTAAAGACTaGATTGTTAGACCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LHCEFELNHLLFHCHLKPLPSKD*IVRPVA
Trigger: TGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAG...TGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS-3UTR CAA 90 bp TCTGGAAAAGTATTCAGGACTAATGTTCACATGCTACTTGGATTGTCACAGCGACATTGTGAATTCGAATaGAACCACCTCCTATTTCAT +
Preference number: 5 (lower is better)
Translates to: SGKVFRTNVHMLLGLSQRHCEFE*NHLLFH
Trigger: ATGAAATAGGAGGTGGTTCAATTCGAATTCACAATG...TCGCTGTGACAATCCAAGTAGCATGTGAACATTAGTCCTGAATACTTTTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648271.1
ENST00000649067.1
CDS-3UTR CAA 90 bp CTGCATTGTGAATTCGAATTGAACCACCTCCTATTTCATTGCCATTTAAAACCAGAATTCCAGTTTCTATaGGCGTTAAGGAATACAGGT +
Preference number: 5 (lower is better)
Translates to: LHCEFELNHLLFHCHLKPEFQFL*ALRNTG
Trigger: ACCTGTATTCCTTAACGCCAATAGAAACTGGAATTC...TGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647730.1
ENST00000648271.1
CDS CCA 72 bp TTCTCCCAGAGCGCGAACCCAAACACAGATCGCCGCTaGGGTCCAAGCGCCCTTCAACTCCGCCCGCTAGTG +
Preference number: 6 (lower is better)
Translates to: FSQSANPNTDRR*GPSALQLRPLV
Trigger: CACTAGCGGGCGGAGTTGAAGGGCGCTTGGACCCCAGCGGCGATCTGTGTTTGGGTTCGCGCTCTGGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648807.1
ENST00000648960.1
CDS TCA 72 bp GCTGCCGACTTCGGTACTGAATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAGACGAACGCAACTCTC +
Preference number: 6 (lower is better)
Translates to: AADFGTESIHTR*LLGLSETNATL
Trigger: GAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGATTCAGTACCGAAGTCGGCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471476.2
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
CDS TCA 72 bp GGAGGATGGCTTAAGCACAGGAGACTGAGATTGCAGTaGGCTATGAATGCACCAGTAGACACCTGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GGWLKHRRLRLQ*AMNAPVDTCLG
Trigger: ACCCAGGCAGGTGTCTACTGGTGCATTCATAGCTCACTGCAATCTCAGTCTCCTGTGCTTAAGCCATCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650297.1
CDS CCA 72 bp GGAGTAACAGTCGCGTTTCAAATCTCGCAGACCTGCTaGCCGATTTCGAGTCTTCTGAAAGAGGAAGGCGAG +
Preference number: 6 (lower is better)
Translates to: GVTVAFQISQTC*PISSLLKEEGE
Trigger: CTCGCCTTCCTCTTTCAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTGAAACGCGACTGTTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS TCA 72 bp TGTAGAGAGAACCCCAGATCGGTTGGGTGGTCCTTCTaGTGGGTCTGGATAAACCCCTGTACAGCTGACTTA +
Preference number: 6 (lower is better)
Translates to: CRENPRSVGWSF*WVWINPCTADL
Trigger: TAAGTCAGCTGTACAGGGGTTTATCCAGACCCATCAGAAGGACCACCCAACCGATCTGGGGTTCTCTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS GCA 72 bp CAAGGAGTAACAGTCGCGTTTCAAATCTCGCAGACCTaGTGGCCGATTTCGAGTCTTCTGAAAGAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: QGVTVAFQISQT*WPISSLLKEEG
Trigger: GCCTTCCTCTTTCAGAAGACTCGAAATCGGCCAGCAGGTCTGCGAGATTTGAAACGCGACTGTTACTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648271.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
CDS CCA 72 bp CACGTGTCTAGAAACAAGACAAATCTCCAAGGTCTCTaGGGTGCTTGCTGGGGTGGAGATAAGGGAAAGACC +
Preference number: 6 (lower is better)
Translates to: HVSRNKTNLQGL*GACWGGDKGKT
Trigger: GGTCTTTCCCTTATCTCCACCCCAGCAAGCACCCCAGAGACCTTGGAGATTTGTCTTGTTTCTAGACACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS TCA 72 bp GCTTGCTGGGGTGGAGATAAGGGAAAGACCTCTCCCTaGGTCTTAAAGCATCAGTCTGCACTTCTACTCAAC +
Preference number: 6 (lower is better)
Translates to: ACWGGDKGKTSP*VLKHQSALLLN
Trigger: GTTGAGTAGAAGTGCAGACTGATGCTTTAAGACTCAGGGAGAGGTCTTTCCCTTATCTCCACCCCAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS TCA 72 bp TACCTACTGGATTCTCTTGTCCTGCAGGACGGGAAATaGCTGTACCAGACACTTGCACCACAGATTCCACAG +
Preference number: 6 (lower is better)
Translates to: YLLDSLVLQDGK*LYQTLAPQIPQ
Trigger: CTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS TCA 72 bp GTCCTTCTGATGGGTCTGGATAAACCCCTGTACAGCTaGCTTAACCAAGAAGGGAAGTACATGTTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: VLLMGLDKPLYS*LNQEGKYMLEP
Trigger: TGGCTCCAACATGTACTTCCCTTCTTGGTTAAGTCAGCTGTACAGGGGTTTATCCAGACCCATCAGAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS TCA 72 bp TGTTTTGCCTTCGGTACTGAATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAGACGAACGCAACTCTC +
Preference number: 6 (lower is better)
Translates to: CFAFGTESIHTR*LLGLSETNATL
Trigger: GAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGATTCAGTACCGAAGGCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000647645.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS TCA 72 bp CAATTTACCTTCGGTACTGAATCCATCCACACAAGGTaGCTTCTTGGCCTAAGTGAGACGAACGCAACTCTC +
Preference number: 6 (lower is better)
Translates to: QFTFGTESIHTR*LLGLSETNATL
Trigger: GAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCTTGTGTGGATGGATTCAGTACCGAAGGTAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS TCA 72 bp ACAGAGGCTGCCGACTCATCCTGGGGAATGATAACTTaGACAAGCCCATCGAAATCTCTTAGGACCAAGAAT +
Preference number: 6 (lower is better)
Translates to: TEAADSSWGMIT*TSPSKSLRTKN
Trigger: ATTCTTGGTCCTAAGAGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAGGATGAGTCGGCAGCCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000647645.1
ENST00000648055.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS GCA 72 bp GATATCTTCGAAACTACCTACTGGATTCTCTTGTCCTaGAGGACGGGAAATGACTGTACCAGACACTTGCAC +
Preference number: 6 (lower is better)
Translates to: DIFETTYWILLS*RTGNDCTRHLH
Trigger: GTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTAGTTTCGAAGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS CAA 72 bp CCTACATGGAATAAGATGAGCTTTTCCCCCATGCTATaGGAGTTTAACAGCTGGTTTATAGGAGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: PTWNKMSFSPML*EFNSWFIGGWP
Trigger: GGGCCAGCCTCCTATAAACCAGCTGTTAAACTCCAATAGCATGGGGGAAAAGCTCATCTTATTCCATGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS TCA 72 bp ATGGGCTTAAGAGCCACCTCACCTGGATTCAAATCCTaGCTCTGCTTACTTTTGTACTGTCACTTTGGCAAG +
Preference number: 6 (lower is better)
Translates to: MGLRATSPGFKS*LCLLLYCHFGK
Trigger: CTTGCCAAAGTGACAGTACAAAAGTAAGCAGAGTCAGGATTTGAATCCAGGTGAGGTGGCTCTTAAGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650297.1
CDS CAA 72 bp TACACAGATATCTTCGAAACTACCTACTGGATTCTCTaGTCCTGCAGGACGGGAAATGACTGTACCAGACAC +
Preference number: 6 (lower is better)
Translates to: YTDIFETTYWIL*SCRTGNDCTRH
Trigger: GTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTAGTTTCGAAGATATCTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS CAA 90 bp AGCAAAAATTACACAGATATCTTCGAAACTACCTACTGGATTCTCTaGTCCTGCAGGACGGGAAATGACTGTACCAGACACTTGCACCAC +
Preference number: 6 (lower is better)
Translates to: SKNYTDIFETTYWIL*SCRTGNDCTRHLHH
Trigger: GTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTAGTTTCGAAGATATCTGTGTAATTTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS CCA 72 bp TGTACAGCTGACTTAACCAAGAAGGGAAGTACATGTTaGAGCCACACGATGGCGAAAAACAATCACGAAATC +
Preference number: 6 (lower is better)
Translates to: CTADLTKKGSTC*SHTMAKNNHEI
Trigger: GATTTCGTGATTGTTTTTCGCCATCGTGTGGCTCCAACATGTACTTCCCTTCTTGGTTAAGTCAGCTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000471476.2
ENST00000647645.1
ENST00000647730.1
ENST00000647788.1
ENST00000648055.1
ENST00000648271.1
ENST00000648458.1
ENST00000648807.1
ENST00000648960.1
ENST00000649067.1
ENST00000649689.2
ENST00000650297.1
CDS CCA 72 bp TTCAGTCTTAGTAAGCCCAGTATCATTTCAGTCCACTaGTGGATCAAGCTTCGTTGTTATACCCTTCAACAG +
Preference number: 6 (lower is better)
Translates to: FSLSKPSIISVH*WIKLRCYTLQQ
Trigger: CTGTTGAAGGGTATAACAACGAAGCTTGATCCACCAGTGGACTGAAATGATACTGGGCTTACTAAGACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS TCA 72 bp ATTCTTAGACTGTCTTTCTCAATTTACCTTCGGTACTaGATCCATCCACACAAGGTGACTTCTTGGCCTAAG +
Preference number: 6 (lower is better)
Translates to: ILRLSFSIYLRY*IHPHKVTSWPK
Trigger: CTTAGGCCAAGAAGTCACCTTGTGTGGATGGATTCAGTACCGAAGGTAAATTGAGAAAGACAGTCTAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS CCA 72 bp AGCATCAGGAACAGGTACAGAAACCCTCTTCAGATTTaGGTTCAGGAAACAGTCACTAAACTTATGGGAAAA +
Preference number: 6 (lower is better)
Translates to: SIRNRYRNPLQI*VQETVTKLMGK
Trigger: TTTTCCCATAAGTTTAGTGACTGTTTCCTGAACCCAAATCTGAAGAGGGTTTCTGTACCTGTTCCTGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS CCA 72 bp AGCAAAAATTACACAGATATCTTCGAAACTACCTACTaGATTCTCTTGTCCTGCAGGACGGGAAATGACTGT +
Preference number: 6 (lower is better)
Translates to: SKNYTDIFETTY*ILLSCRTGNDC
Trigger: ACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAGTAGGTAGTTTCGAAGATATCTGTGTAATTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648055.1
CDS TCA 72 bp TCAAGCTTCGTTGTTATACCCTTCAACAGATGTTACTaGGATGTACCTACTGAGAATGACATTTGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: SSFVVIPFNRCY*DVPTENDIWVF
Trigger: AAAGACCCAAATGTCATTCTCAGTAGGTACATCTCAGTAACATCTGTTGAAGGGTATAACAACGAAGCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648055.1