Pregenerated sensors for DAPL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163331Ensembl transcript IDs: ENST00000309950.8, ENST00000343761.4, ENST00000409042.5, ENST00000621326.4
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATACAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATaGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGC | + |
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Preference number: 1 (lower is better) Translates to: RYKSCLIYQASAARL*KALALFAKLSDIRG Trigger: GCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR CAA 90 bp | TTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTaGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: FTKQVQHAYGKLWPF*LSCQIFEAAGQTAV Trigger: CACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTTTGATATTCGAGGCAGCTaGCCAGACGGCTGTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: PFLLSCQIFEAAGQTAVFDIRGS*PDGCVL Trigger: TAAAACACAGCCGTCTGGCCAGCTGCCTCGAATATC...AAACACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR CAA 90 bp | AGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTaGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SCLIYQASAARLWKA*ALFAKLSDIRGSWP Trigger: TGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCGATATTCGAGGCAGCTaGCCAGACGGCTGTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: QKLLNLPSKCSTPMESFGDIRGS*PDGCVL Trigger: TAAAACACAGCCGTCTGGCCAGCTGCCTCGAATATC...GCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR-3UTR CAA 90 bp | GCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATAAGCTTTGGCCCTTTTaGCTAAGCTGTCAGATATTC | + |
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Preference number: 3 (lower is better) Translates to: ASAARLWKALALFAKLSDKLWPF*LSCQIF Trigger: GAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTT...ATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR CCA 72 bp | TTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTaGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: FTKQVQHAYGKL*PFLLSCQIFEA Trigger: TGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR-3UTR CAA 90 bp | GCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAAAGCTTTGGCCCTTTTaGCTAAGCTGTCAGATATTC | + |
|
Preference number: 3 (lower is better) Translates to: AARLWKALALFAKLSDIRKLWPF*LSCQIF Trigger: GAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTT...TCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR GCA 72 bp | GGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGTaGAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GKIQKLLNLPSK*STPMESFGPFC Trigger: GCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR CCA 72 bp | AGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATaGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SCLIYQASAARL*KALALFAKLSD Trigger: ATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | GCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTTGTGTGCCAGTGCCAGTaGCAGTGCTGGTGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALFAKLSDIRGSWPDGCVVCQCQ*QCWCSG Trigger: TCCAGAGCACCAGCACTGGCACTGGCACTGGCACAC...AACACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | TGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGATTTGCCATAGCGTGTaGCAGTGCCAGTGCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WPFLLSCQIFEAAGQTAVICHSV*QCQCQC Trigger: GCACTGGCACTGGCACTGGCACACGCTATGGCAAAT...CACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR TCA 90 bp | TACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGGGCAGGAGAACCACTTaGACCCGGGAGGTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: YQASAARLWKALALFAKLGRRTT*TREVEV Trigger: AACCTCCACCTCCCGGGTTCAAGTGGTTCTCCTGCC...CAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | CAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGTGTGCCAGTGCCAGTaGCAGTGCTGGTGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QASAARLWKALALFAKLSVCQCQ*QCWCSG Trigger: TCCAGAGCACCAGCACTGGCACTGGCACTGGCACAC...TGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | TGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGGTTGAGCTTCTCCAGTaGGTCATTCAGGGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WPFLLSCQIFEAAGQTAVVELLQ*VIQGIQ Trigger: CTGGATGCCCTGAATGACGCACTGGAGAAGCTCAAC...CACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309950.8 |
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| CDS-3UTR CCA 90 bp | AAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACCCAGTGCTGGTGCTCTaGAGGCTGAATGCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KALALFAKLSDIRGSWPDPVLVL*RLNASC Trigger: ACAGCTGGCATTCAGCCTCCAGAGCACCAGCACTGG...GTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| 3UTR CAA 72 bp | CAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTaGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVQHAYGKLWPF*LSCQIFEAAGQ Trigger: CTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR TCA 90 bp | TACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGAGGTGGAGGTTGCAGTaGGCTGAGATCGCTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: YQASAARLWKALALFAKLRWRLQ*AEIAPL Trigger: CAATGGAGCGATCTCAGCTCACTGCAACCTCCACCT...CAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | ATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCATAGCGTGTGCCAGTaGCAGTGCCAGTGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IYQASAARLWKALALFAKHSVCQ*QCQCWC Trigger: GCACCAGCACTGGCACTGGCACTGGCACACGCTATG...CTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR TCA 90 bp | ACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTGCAGGTGTGGGTTTTTaGTGCGCCATGTGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKQVQHAYGKLWPFLLSCAGVGF*CAMCTV Trigger: AACAGTGCACATGGCGCATCAAAAACCCACACCTGC...ACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR TCA 90 bp | GCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTTTTAAATCCAGAGGTTGCAGTGAGCTaGGATCGCTCCATTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKLSDIRGSWPDGCVLNPEVAVS*DRSIAF Trigger: GAAAGCAATGGAGCGATCTCAGCTCACTGCAACCTC...TGGATTTAAAACACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | AAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGTCTTGCACTTCATTTaGCATAGCGTGTGCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLWPFLLSCQIFEAAGQTVLHFI*HSVCQC Trigger: GCACTGGCACACGCTATGGCAAATGAAGTGCAAGAC...CGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | CAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCAGTGCTGGTGCTCTaGAGGCTGAATGCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNLPSKCSTPMESFGPVLVL*RLNASC Trigger: ACAGCTGGCATTCAGCCTCCAGAGCACCAGCACTGG...GCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTTTTCCAGAGCAGGTGTaGGTTTTTGATGCGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: LALFAKLSDIRGSWPDGCFPEQV*VFDAPC Trigger: ACATGGCGCATCAAAAACCCACACCTGCTCTGGAAA...ACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | CACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGGGGAGAGCAGGTCTTaGACTTCATTTGCCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: HAYGKLWPFLLSCQIFEAGESRS*TSFAIA Trigger: CGCTATGGCAAATGAAGTGCAAGACCTGCTCTCCCC...TGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | CTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTTTTAGGGGAGAGCAGGTCTTaGACTTCATTTGCCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: LFAKLSDIRGSWPDGCVLGESRS*TSFAIA Trigger: CGCTATGGCAAATGAAGTGCAAGACCTGCTCTCCCC...TAAAACACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | GCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTTGCCTATGGAAAGCTTTaGCCCTTTTTGCTAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALFAKLSDIRGSWPDGCVAYGKL*PFLLSC Trigger: ACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGC...AACACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTAGATCCTTTTCAGTaGAACAACCTTTTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LALFAKLSDIRGSWPDGCVDPFQ*NNLFQS Trigger: GCTCTGGAAAAGGTTGTTCCACTGAAAAGGATCTAC...ACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | TACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGTGCCATAGCGTGTGCCAGTaGCAGTGCCAGTGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: YLKSKGKIQKLLNLPSKCHSVCQ*QCQCWC Trigger: GCACCAGCACTGGCACTGGCACTGGCACACGCTATG...GCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | AAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCGTCTTGCACTTCATTTaGCATAGCGTGTGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: KSCLIYQASAARLWKALAVLHFI*HSVCQC Trigger: GCACTGGCACACGCTATGGCAAATGAAGTGCAAGAC...GGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | AAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGTAGATCCTTTTCAGTaGAACAACCTTTTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KLWPFLLSCQIFEAAGQTVDPFQ*NNLFQS Trigger: GCTCTGGAAAAGGTTGTTCCACTGAAAAGGATCTAC...CGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | GCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCCCAGTGTCTGTATTTTaGCAACATTTGCAATGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ARLWKALALFAKLSDIRGPVSVF*QHLQWH Trigger: GTGCCATTGCAAATGTTGCCAAAATACAGACACTGG...GCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTCATGTGCACTGTTGCTaGAAATTTATAGTTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LALFAKLSDIRGSWPDGCHVHCC*KFIVEL Trigger: AAGCTCAACTATAAATTTCCAGCAACAGTGCACATG...ACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309950.8 |
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| 3UTR CAA 72 bp | ATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTaGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IYQASAARLWKA*ALFAKLSDIRG Trigger: GCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTTATTTTGGCAACATTTaGAATGGCACTTGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LWPFLLSCQIFEAAGQTAYFGNI*NGTCFL Trigger: GAGAAAACAAGTGCCATTGCAAATGTTGCCAAAATA...AGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTTTTCCAGAGCAGGTGTaGGTTTTTGATGCGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: LIYQASAARLWKALALFAFPEQV*VFDAPC Trigger: ACATGGCGCATCAAAAACCCACACCTGCTCTGGAAA...AGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | CAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCGCCATGTGCACTGTTaGTGGAAATTTATAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QKLLNLPSKCSTPMESFGRHVHC*WKFIVE Trigger: CTCAACTATAAATTTCCAGCAACAGTGCACATGGCG...GCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGGCAACATTTGCAATaGCACTTGTTTTCTCGAATC | + |
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Preference number: 4 (lower is better) Translates to: FTKQVQHAYGKLWPFLLSWQHLQ*HLFSRI Trigger: GATTCGAGAAAACAAGTGCCATTGCAAATGTTGCCA...GCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | TACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGGGAAGATACAAAAGCTaGTTAATTTACCAAGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: YQASAARLWKALALFAKLGRYKS*LIYQAS Trigger: ACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCC...CAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGTGCGATATTCGAGGCAGCTaGCCAGACGGCTGTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: YLKSKGKIQKLLNLPSKCDIRGS*PDGCVL Trigger: TAAAACACAGCCGTCTGGCCAGCTGCCTCGAATATC...GCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | CAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCATGTGCACTGTTGCTaGAAATTTATAGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNLPSKCSTPMESFGHVHCC*KFIVEL Trigger: CAGCTCAACTATAAATTTCCAGCAACAGTGCACATG...GCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621326.4 |
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| CDS-3UTR TCA 90 bp | TATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGGCAGGTGTGGGTTTTTaGTGCGCCATGTGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YYLKSKGKIQKLLNLPSKAGVGF*CAMCTV Trigger: AACAGTGCACATGGCGCATCAAAAACCCACACCTGC...CTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | AGATACAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTCGCCATGTGCACTGTTaGTGGAAATTTATAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: RYKSCLIYQASAARLWKARHVHC*WKFIVE Trigger: CTCAACTATAAATTTCCAGCAACAGTGCACATGGCG...AGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGTGCAGTGCAGCACGCCTATaGAAAGCTTTGGCCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: YLKSKGKIQKLLNLPSKCSAARL*KALALF Trigger: AAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACT...GCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGGATATTCGAGGCAGCTaGCCAGACGGCTGTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: YYLKSKGKIQKLLNLPSKDIRGS*PDGCVL Trigger: TAAAACACAGCCGTCTGGCCAGCTGCCTCGAATATC...CTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | CTTTATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAGTGCAGCACGCCTATaGAAAGCTTTGGCCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LYYLKSKGKIQKLLNLPSSAARL*KALALF Trigger: AAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACT...GCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | TATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGGCCTATGGAAAGCTTTaGCCCTTTTTGCTAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YYLKSKGKIQKLLNLPSKAYGKL*PFLLSC Trigger: ACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGC...CTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | TACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGTGCTATTTTGGCAACATTTaGAATGGCACTTGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YLKSKGKIQKLLNLPSKCYFGNI*NGTCFL Trigger: GAGAAAACAAGTGCCATTGCAAATGTTGCCAAAATA...GCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CCA 90 bp | CTTTATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCTGGCAACATTTGCAATaGCACTTGTTTTCTCGAATC | + |
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Preference number: 4 (lower is better) Translates to: LYYLKSKGKIQKLLNLPSWQHLQ*HLFSRI Trigger: GATTCGAGAAAACAAGTGCCATTGCAAATGTTGCCA...GCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR GCA 90 bp | CTTTATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCGGAAGATACAAAAGCTaGTTAATTTACCAAGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LYYLKSKGKIQKLLNLPSGRYKS*LIYQAS Trigger: ACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCC...GCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATAAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS GCA 90 bp | TTTACTGCAGGAGGATGTCCCCCTTTCCGAGGGGAGAGCAGGTCTTaGACTTCATTTGCCATAGCGTGTGCCAGTGCCAGTGCCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: FTAGGCPPFRGESRS*TSFAIACASASASA Trigger: AGCACTGGCACTGGCACTGGCACACGCTATGGCAAATGAAGTGCAAGACCTGCTCTCCCCTCGGAAAGGGGGACATCCTCCTGCAGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000309950.8 ENST00000409042.5 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | TGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGGCTGAGATCGCTCCATaGCTTTCCAGCCTGGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: WPFLLSCQIFEAAGQTAVAEIAP*LSSLGK Trigger: TTTGCCCAGGCTGGAAAGCAATGGAGCGATCTCAGC...CACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | GCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTTAGGGGAGAGCAGGTCTaGCACTTCATTTGCCATAGC | + |
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Preference number: 5 (lower is better) Translates to: ALFAKLSDIRGSWPDGCVRGEQV*HFICHS Trigger: GCTATGGCAAATGAAGTGCAAGACCTGCTCTCCCCT...AACACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | AAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGAGGGGAGAGCAGGTCTaGCACTTCATTTGCCATAGC | + |
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Preference number: 5 (lower is better) Translates to: KQVQHAYGKLWPFLLSCQRGEQV*HFICHS Trigger: GCTATGGCAAATGAAGTGCAAGACCTGCTCTCCCCT...CTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | GCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTTTTAAATCCAAGCAGGTGTGGGTTTTaGATGCGCCATGTGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: AKLSDIRGSWPDGCVLNPSRCGF*MRHVHC Trigger: ACAGTGCACATGGCGCATCAAAAACCCACACCTGCT...TGGATTTAAAACACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | GGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGCGCCTATGGAAAGCTTaGGCCCTTTTTGCTAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GKLWPFLLSCQIFEAAGQRLWKA*ALFAKL Trigger: CAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCG...CTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS GCA 90 bp | CTGGATCCTCTGAGCTTGTGTCAAATCCACTTGTTTCCTTCCAGCTaGAACCATGGTGAAAAGGCTGGACCTGCCTTTCATTCCTCACTC | + |
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Preference number: 5 (lower is better) Translates to: LDPLSLCQIHLFPSS*NHGEKAGPAFHSSL Trigger: GAGTGAGGAATGAAAGGCAGGTCCAGCCTTTTCACCATGGTTGCAGCTGGAAGGAAACAAGTGGATTTGACACAAGCTCAGAGGATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343761.4 |
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| CDS-3UTR CAA 90 bp | TGGCCCTTTTTGCTAAGCTGTCAGATATTCGAGGCAGCTGGCCAGACGGCTGTGTCCAGTGTCTGTATTTaGGCAACATTTGCAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WPFLLSCQIFEAAGQTAVSSVCI*ATFAMA Trigger: TGCCATTGCAAATGTTGCCAAAATACAGACACTGGA...CACAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS GCA 90 bp | TGTGTCTTGGACACCTTGTGTCAAATCCACTTGTTTCCTTCCAGCTaGAACCATGGTGAAAAGGCTGGACCTGCCTTTCATTCCTCACTC | + |
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Preference number: 5 (lower is better) Translates to: CVLDTLCQIHLFPSS*NHGEKAGPAFHSSL Trigger: GAGTGAGGAATGAAAGGCAGGTCCAGCCTTTTCACCATGGTTGCAGCTGGAAGGAAACAAGTGGATTTGACACAAGGTGTCCAAGACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409042.5 |
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| CDS-3UTR CAA 90 bp | CAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCAGCAGGTGTGGGTTTTaGATGCGCCATGTGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: QKLLNLPSKCSTPMESFGSRCGF*MRHVHC Trigger: ACAGTGCACATGGCGCATCAAAAACCCACACCTGCT...GCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | GTTTGGATGCTTTATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATAGGCAGGAGAACCACTaGAACCCGGGAGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: VWMLYYLKSKGKIQKLLNRQENH*NPGGGG Trigger: ACCTCCACCTCCCGGGTTCAAGTGGTTCTCCTGCCT...ATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATAAAGCATCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | GCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTGCTAAGCTGTCAGATATTCGACATTTGCAATGGCACTaGTTTTCTCGAATCCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: AARLWKALALFAKLSDIRHLQWH*FSRILF Trigger: AAACAGGATTCGAGAAAACAAGTGCCATTGCAAATG...TCGAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | TGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCTTTGGCCCTTTTTAAGCTTTGGCCCTTTTaGCTAAGCTGTCAGATATTC | + |
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Preference number: 5 (lower is better) Translates to: CLIYQASAARLWKALALFKLWPF*LSCQIF Trigger: GAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTT...AAAAAGGGCCAAAGCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | AAGATACAAAAGCTGCTTAATTTACCAAGCAAGTGCAGCACGCCTATGGAAAGCCATTTGCAATGGCACTaGTTTTCTCGAATCCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: KIQKLLNLPSKCSTPMESHLQWH*FSRILF Trigger: AAACAGGATTCGAGAAAACAAGTGCCATTGCAAATG...GCTTTCCATAGGCGTGCTGCACTTGCTTGGTAAATTAAGCAGCTTTTGTATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | CTTTATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCCGCCTATGGAAAGCTTaGGCCCTTTTTGCTAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LYYLKSKGKIQKLLNLPSRLWKA*ALFAKL Trigger: CAGCTTAGCAAAAAGGGCCAAAGCTTTCCATAGGCG...GCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS-3UTR CAA 90 bp | TATTACCTAAAGTCAAAGGGGAAGATACAAAAGCTGCTTAATTTACCAAGCAAGAAGCTTTGGCCCTTTTaGCTAAGCTGTCAGATATTC | + |
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Preference number: 5 (lower is better) Translates to: YYLKSKGKIQKLLNLPSKKLWPF*LSCQIF Trigger: GAATATCTGACAGCTTAGCAAAAAGGGCCAAAGCTT...CTTGCTTGGTAAATTAAGCAGCTTTTGTATCTTCCCCTTTGACTTTAGGTAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000309950.8 ENST00000621326.4 |
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| CDS GCA 72 bp | GGAGAGCAGGTCTTGCACTTCATTTGCCATAGCGTGTaGCAGTGCCAGTGCCAGTGCTGGTGCTCTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GEQVLHFICHSV*QCQCQCWCSGG Trigger: GCCTCCAGAGCACCAGCACTGGCACTGGCACTGGCACACGCTATGGCAAATGAAGTGCAAGACCTGCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000309950.8 ENST00000409042.5 ENST00000621326.4 |
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| CDS GCA 72 bp | GGAGGATGTCCCCCTTTCCGAGGGGAGAGCAGGTCTTaGACTTCATTTGCCATAGCGTGTGCCAGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GGCPPFRGESRS*TSFAIACASAS Trigger: ACTGGCACTGGCACACGCTATGGCAAATGAAGTGCAAGACCTGCTCTCCCCTCGGAAAGGGGGACATCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000309950.8 ENST00000409042.5 ENST00000621326.4 |
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| CDS CAA 72 bp | AGGAGGATGTCCCCCTTTCCGAGGGGAGAGCAGGTCTaGCACTTCATTTGCCATAGCGTGTGCCAGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRMSPFPRGEQV*HFICHSVCQCQ Trigger: CTGGCACTGGCACACGCTATGGCAAATGAAGTGCAAGACCTGCTCTCCCCTCGGAAAGGGGGACATCCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000309950.8 ENST00000409042.5 ENST00000621326.4 |
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| CDS CAA 90 bp | TTGAGCTTCTCCAGTGCGTCATTCAGGGCATCCAGTGTCTGTATTTaGGCAACATTTGCAATGGCACTTGTTTTCTCGAATCCTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LSFSSASFRASSVCI*ATFAMALVFSNPVF Trigger: AAAAACAGGATTCGAGAAAACAAGTGCCATTGCAAATGTTGCCAAAATACAGACACTGGATGCCCTGAATGACGCACTGGAGAAGCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309950.8 |
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| CDS CAA 90 bp | TGTTCCTTCTCCAGTGCGTCATTCAGGGCATCCAGTGTCTGTATTTaGGCAACATTTGCAATGGCACTTGTTTTCTCGAATCCTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: CSFSSASFRASSVCI*ATFAMALVFSNPVF Trigger: AAAAACAGGATTCGAGAAAACAAGTGCCATTGCAAATGTTGCCAAAATACAGACACTGGATGCCCTGAATGACGCACTGGAGAAGGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343761.4 ENST00000409042.5 |
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| CDS CAA 90 bp | AAACTCTTCTCCAGTGCGTCATTCAGGGCATCCAGTGTCTGTATTTaGGCAACATTTGCAATGGCACTTGTTTTCTCGAATCCTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: KLFSSASFRASSVCI*ATFAMALVFSNPVF Trigger: AAAAACAGGATTCGAGAAAACAAGTGCCATTGCAAATGTTGCCAAAATACAGACACTGGATGCCCTGAATGACGCACTGGAGAAGAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621326.4 |
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