RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAPK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000167657

Ensembl transcript IDs: ENST00000301264.7, ENST00000545797.7, ENST00000593844.1, ENST00000594894.1, ENST00000595279.1, ENST00000596311.5, ENST00000601824.1

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATaGGGCTCGCGGAGGAGTCCGCAGCAGGGCACCCCACACCCGGGG +
Preference number: 1 (lower is better)
Translates to: GCRGPLLPRRPQARR*GSRRSPQQGTPHPG
Trigger: CCCCGGGTGTGGGGTGCCCTGCTGCGGACTCCTCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR CCA 90 bp CCGGGCCTGAACCAGGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTaGGTCCCAACCCTCACGGTGCCACAGGCCACGCTGCCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: PGLNQGCIRAASAPR*VPTLTVPQATLPGG
Trigger: CCCTCCAGGCAGCGTGGCCTGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR CCA 90 bp GCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTaGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCACG +
Preference number: 1 (lower is better)
Translates to: AHSGRPHQARRHPAA*GLPVRRPSHPPRPT
Trigger: CGTGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 90 bp AAACCCTCCTCCGGGCCTGAACCAGGGCTGCATTCGGGCCGCCTCTaGGCCTCGGTGGGTCCCAACCCTCACGGTGCCACAGGCCACGCT +
Preference number: 1 (lower is better)
Translates to: KPSSGPEPGLHSGRL*ASVGPNPHGATGHA
Trigger: AGCGTGGCCTGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGTTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR TCA 90 bp CCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTaGACCAGGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCC +
Preference number: 1 (lower is better)
Translates to: PPNCPCNYPQTLLRA*TRAAFGPPLRLGGS
Trigger: GGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 90 bp TCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCAGGGCTaGATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACG +
Preference number: 1 (lower is better)
Translates to: SVQLPANPPPGLNQG*IRAASAPRWVPTLT
Trigger: CGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 90 bp CCTGGCCCCAGGAGTCAGCCCCGTTGGACACACACCAGCCAAGGATaGCACCAGGTCTGTCGGGTGCTGGACATCCCACGCCCAGGACCC +
Preference number: 1 (lower is better)
Translates to: PGPRSQPRWTHTSQG*HQVCRVLDIPRPGP
Trigger: GGGTCCTGGGCGTGGGATGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCTGGGGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR GCA 90 bp CCCGTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGTCGGGTaGTGGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCT +
Preference number: 1 (lower is better)
Translates to: PVGHTPAKDATRSVG*WTSHAQDPTPATQA
Trigger: AGCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR CCA 90 bp GTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGTCGGGTGCTaGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCTCAC +
Preference number: 1 (lower is better)
Translates to: VGHTPAKDATRSVGC*TSHAQDPTPATQAH
Trigger: GTGAGCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR TCA 90 bp GAACTGAGGTTCAGGGGCTCATCCGGCAGCAGAGTCAACGCCTCGTaGCGGAGACTGCCCAGCCCGACGCAAAGCCGAGAGTGCTCTCTC +
Preference number: 1 (lower is better)
Translates to: ELRFRGSSGSRVNAS*RRLPSPTQSRECSL
Trigger: GAGAGAGCACTCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTGCCGGATGAGCCCCTGAACCTCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR GCA 90 bp TCAGGGGCTCATCCGGCAGCAGAGTCAACGCCTCGTGACGGAGACTaGCCAGCCCGACGCAAAGCCGAGAGTGCTCTCTCGAGAAAAACG +
Preference number: 1 (lower is better)
Translates to: SGAHPAAESTPRDGD*PARRKAESALSRKT
Trigger: CGTTTTTCTCGAGAGAGCACTCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTGCCGGATGAGCCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR-3UTR CCA 90 bp GGCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCCGCCTCCAGCCTGGTaGCGCTGGGCAAGGACAGGC +
Preference number: 2 (lower is better)
Translates to: GCRGPLLPRRPQARRWGSPPPAW*RWARTG
Trigger: GCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGGCGG...CGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR TCA 90 bp GCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGAACCCTCCTCCGGGCCTaGACCAGGGCTGCATTCGGG +
Preference number: 2 (lower is better)
Translates to: AEGRSCLGVHRRDDGARGTLLRA*TRAAFG
Trigger: CCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGT...TCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp GCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCACAGGCCACGCTGCCTaGAGGGTCCCAGGGTCACCG +
Preference number: 2 (lower is better)
Translates to: AAEGRSCLGVHRRDDGARTGHAA*RVPGSP
Trigger: CGGTGACCCTGGGACCCTCCAGGCAGCGTGGCCTGT...GCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp GCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGAGCCTCTGCGCCTCGGTaGGTCCCAACCCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: AEGRSCLGVHRRDDGARGASAPR*VPTLTV
Trigger: CACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGC...TCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp TGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGGCCTCTGCGCCTCGGTaGGTCCCAACCCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: CRGPLLPRRPQARRWGSRASAPR*VPTLTV
Trigger: CACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGC...CCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR GCA 90 bp CAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCACGAACACCCACCCCTGCCTaGGAACTTACGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: QQRGDCLSAVHPTLPVPRTPTPA*ELTGLA
Trigger: AGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGT...TCGTGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR GCA 90 bp CACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCTCCCAACCCTCACGGTaGCACAGGCCACGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: HTVEDPTKPGATQQRGDCSQPSR*HRPRCL
Trigger: CAGGCAGCGTGGCCTGTGGCACCGTGAGGGTTGGGA...GCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCAGGCACCCGGGCGATaGGAGGCGCAGCGTCCACAG +
Preference number: 2 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGQAPGR*EAQRPQ
Trigger: CTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCAGCCTGGTGGCGCTaGGCAAGGACAGGCACCCGG +
Preference number: 2 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGPAWWR*ARTGTR
Trigger: CCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR GCA 90 bp CACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCACACCCACCCCTGCCTaGGAACTTACGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: HTVEDPTKPGATQQRGDCTPTPA*ELTGLA
Trigger: AGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGT...GCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGACAGGCCACGCTGCCTaGAGGGTCCCAGGGTCACCG +
Preference number: 2 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGTGHAA*RVPGSP
Trigger: CGGTGACCCTGGGACCCTCCAGGCAGCGTGGCCTGT...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp GCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCCCCACGACCTCCTCCTaGGCTAATGGCAGCAACAGG +
Preference number: 2 (lower is better)
Translates to: AAEGRSCLGVHRRDDGARPTTSS*ANGSNR
Trigger: CCTGTTGCTGCCATTAGCCCAGGAGGAGGTCGTGGG...GCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR GCA 90 bp AGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGTCCCACACCCACCCCTaGCTGCGAACTTACGGGCCT +
Preference number: 2 (lower is better)
Translates to: RRAHSGRPHQARRHPAAWSHTHP*LRTYGP
Trigger: AGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGTGGGA...CCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR GCA 90 bp AGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACAGGGTCACCGACGATaGAGGGGTGAAGGTGAAGGC +
Preference number: 2 (lower is better)
Translates to: RAHSGRPHQARRHPAAWGQGHRR*RGEGEG
Trigger: GCCTTCACCTTCACCCCTGCATCGTCGGTGACCCTG...TCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp GCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCAGGCACCCGGGCGATaGGAGGCGCAGCGTCCACAG +
Preference number: 2 (lower is better)
Translates to: ATGSTPPNCPCNYPQTLLQAPGR*EAQRPQ
Trigger: CTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTG...GAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp CAGCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCCCGCCTCCAGCCTGGTaGCGCTGGGCAAGGACAGGC +
Preference number: 2 (lower is better)
Translates to: QQQAAPRRIVRATTRKPSPPPAW*RWARTG
Trigger: GCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGGCGG...GGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp AGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGCGAACTTACGGGCCTaGCTCCAGCTCCTCCCACTC +
Preference number: 2 (lower is better)
Translates to: RRAHSGRPHQARRHPAAWANLRA*LQLLPL
Trigger: GAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGC...CCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR GCA 90 bp CAGCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCCAACCCTCACGGTaGCACAGGCCACGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QQQAAPRRIVRATTRKPSSQPSR*HRPRCL
Trigger: CAGGCAGCGTGGCCTGTGGCACCGTGAGGGTTGGGA...GGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR GCA 90 bp CCGACGCAAAGCCGAGAGTGCTCTCTCGAGAAAAACGCTGCGGCCCTGGCCCCAACCAGGTCTGTCGGGTaGTGGACATCCCACGCCCAG +
Preference number: 2 (lower is better)
Translates to: PTQSRECSLEKNAAALAPTRSVG*WTSHAQ
Trigger: CTGGGCGTGGGATGTCCAGCACCCGACAGACCTGGT...TGGGGCCAGGGCCGCAGCGTTTTTCTCGAGAGAGCACTCTCGGCTTTGCGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR-3UTR CCA 90 bp CCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCAGCGAACTTACGGGCCTaGCTCCAGCTCCTCCCACTC +
Preference number: 2 (lower is better)
Translates to: PRRIVRATTRKPSSGPEPANLRA*LQLLPL
Trigger: GAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGC...TGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp CGGCAGCAGAGTCAACGCCTCGTGACGGAGACTGCCCAGCCCGACGCAAAGCCGACCCTCCCCAGCCACTaGGGGTTGTCACATCCACAA +
Preference number: 2 (lower is better)
Translates to: RQQSQRLVTETAQPDAKPTLPSH*GLSHPQ
Trigger: TTGTGGATGTGACAACCCCCAGTGGCTGGGGAGGGT...CGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR-3UTR GCA 90 bp GCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCTCCCACACCCACCCCTaGCTGCGAACTTACGGGCCT +
Preference number: 2 (lower is better)
Translates to: ATGSTPPNCPCNYPQTLLSHTHP*LRTYGP
Trigger: AGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGTGGGA...GAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CCA 90 bp TCTGGAAGCCAGTATTTTATTTCTCTTGGCTGCAGAGGGCCGCTCTTGCCTAGGGAGAAGGGCACACAGTaGAAGACCCCACCAAGCCCG +
Preference number: 2 (lower is better)
Translates to: SGSQYFISLGCRGPLLPREKGTQ*KTPPSP
Trigger: CGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTC...CCTAGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACTGGCTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 72 bp CCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTaGCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCA +
Preference number: 3 (lower is better)
Translates to: PTKPGATQQRGD*LSAVHPTLPVP
Trigger: TGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR CCA 72 bp GGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTaGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCC +
Preference number: 3 (lower is better)
Translates to: GRPHQARRHPAA*GLPVRRPSHPP
Trigger: GGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR CCA 72 bp ACCCGGGGGACCGGCCTCGGCGAGAAGGGCACACAGTaGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: TRGTGLGEKGTQ*KTPPSPAPPSS
Trigger: GCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCCCCCGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR CCA 72 bp GGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATaGGGCTCGCGGAGGAGTCCGCAGCAGGGCACCCCA +
Preference number: 3 (lower is better)
Translates to: GPLLPRRPQARR*GSRRSPQQGTP
Trigger: TGGGGTGCCCTGCTGCGGACTCCTCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 72 bp TCCGGGCCTGAACCAGGGCTGCATTCGGGCCGCCTCTaGGCCTCGGTGGGTCCCAACCCTCACGGTGCCACA +
Preference number: 3 (lower is better)
Translates to: SGPEPGLHSGRL*ASVGPNPHGAT
Trigger: TGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 72 bp CTACCCGCAAACCCTCCTCCGGGCCTGAACCAGGGCTaGATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: LPANPPPGLNQG*IRAASAPRWVP
Trigger: TGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR CCA 72 bp AACCAGGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTaGGTCCCAACCCTCACGGTGCCACAGGCCACGCTG +
Preference number: 3 (lower is better)
Translates to: NQGCIRAASAPR*VPTLTVPQATL
Trigger: CAGCGTGGCCTGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR-3UTR CAA 90 bp TGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGCAGCACCCCGCCGAATaGTCCGTGCAACTACCCGCA +
Preference number: 3 (lower is better)
Translates to: CRGPLLPRRPQARRWGSRQHPAE*SVQLPA
Trigger: TGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTG...CCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR TCA 72 bp TGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTaGACCAGGGCTGCATTCGGGCCGCCTCTGCGCCTC +
Preference number: 3 (lower is better)
Translates to: CPCNYPQTLLRA*TRAAFGPPLRL
Trigger: GAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 72 bp GCCACGCTGCCTGGAGGGTCCCAGGGTCACCGACGATaGAGGGGTGAAGGTGAAGGCCAGCGTGGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: ATLPGGSQGHRR*RGEGEGQRGGC
Trigger: ACAGCCTCCACGCTGGCCTTCACCTTCACCCCTGCATCGTCGGTGACCCTGGGACCCTCCAGGCAGCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR GCA 72 bp CACACACCAGCCAAGGATGCCACCAGGTCTGTCGGGTaGTGGACATCCCACGCCCAGGACCCAACCCCCGCC +
Preference number: 3 (lower is better)
Translates to: HTPAKDATRSVG*WTSHAQDPTPA
Trigger: GGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR CCA 72 bp ACACCAGCCAAGGATGCCACCAGGTCTGTCGGGTGCTaGACATCCCACGCCCAGGACCCAACCCCCGCCACA +
Preference number: 3 (lower is better)
Translates to: TPAKDATRSVGC*TSHAQDPTPAT
Trigger: TGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR TCA 72 bp TTCAGGGGCTCATCCGGCAGCAGAGTCAACGCCTCGTaGCGGAGACTGCCCAGCCCGACGCAAAGCCGAGAG +
Preference number: 3 (lower is better)
Translates to: FRGSSGSRVNAS*RRLPSPTQSRE
Trigger: CTCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTGCCGGATGAGCCCCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR GCA 72 bp CATCCGGCAGCAGAGTCAACGCCTCGTGACGGAGACTaGCCAGCCCGACGCAAAGCCGAGAGTGCTCTCTCG +
Preference number: 3 (lower is better)
Translates to: HPAAESTPRDGD*PARRKAESALS
Trigger: CGAGAGAGCACTCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTGCCGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR CCA 72 bp AAACGCTGCGGCCCTGGCCCCAGGAGTCAGCCCCGTTaGACACACACCAGCCAAGGATGCCACCAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: KRCGPGPRSQPR*THTSQGCHQVC
Trigger: ACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCTGGGGCCAGGGCCGCAGCGTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR GCA 72 bp AGGAGTCAGCCCCGTTGGACACACACCAGCCAAGGATaGCACCAGGTCTGTCGGGTGCTGGACATCCCACGC +
Preference number: 3 (lower is better)
Translates to: RSQPRWTHTSQG*HQVCRVLDIPR
Trigger: GCGTGGGATGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp GCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGCCTCCACGTCCTCGTaGCAGAGCCGCCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: APGRWEAQRPQEAPPPQAASTSS*QSRRLR
Trigger: GCGCAGCCGGCGGCTCTGCCACGAGGACGTGGAGGC...GGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCGCCGCCGCTCGGGCTTaGGGCCGCTGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: GRWEAQRPQEAPPPQAELAAARA*GRCPHH
Trigger: GTGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGC...GAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCCTCCACGTCCTCGTaGCAGAGCCGCCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGAASTSS*QSRRLR
Trigger: GCGCAGCCGGCGGCTCTGCCACGAGGACGTGGAGGC...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCACCAGCAGCGCGCCCTTaGCCTCCTCCTGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGAPAARP*PPPAPA
Trigger: GGCAGGCGCAGGAGGAGGCCAAGGGCGCGCTGCTGG...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCCCGCCTCCAGCCTGGTaGCGCTGGGCAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GRWEAQRPQEAPPPQAELPPPAW*RWARTG
Trigger: GCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGGCGG...GAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp GGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCCCACGTCCTCCTGCCTaGACGTGGACATGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GRWEAQRPQEAPPPQAELPRPPA*TWTWRP
Trigger: CGGCCGCCATGTCCACGTTCAGGCAGGAGGACGTGG...GAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp ATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACAGGCCGCCGCCGCTCGGGCTTaGGGCCGCTGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: IRAASAPRWVPTLTVPQAAAARA*GRCPHH
Trigger: GTGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGC...GGCCTGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTTGGCCTCCTCCTaGGCCTGCCGCTTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: PSPAPPSSVGTACPPSIPPLASS*ACRLSA
Trigger: GGCGCTCAAGCGGCAGGCGCAGGAGGAGGCCAAGGG...TGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCCCCTGCAGCTTCTCCTaGTCCAGGGCGCGCACGAGG +
Preference number: 4 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPPCSFS*SRARTR
Trigger: CCTCGTGCGCGCCCTGGAGCAGGAGAAGCTGCAGGG...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
73% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCACAGGCCACGCTGCCTaGAGGGTCCCAGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: GRWEAQRPQEAPPPQAELTGHAA*RVPGSP
Trigger: CGGTGACCCTGGGACCCTCCAGGCAGCGTGGCCTGT...GAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCACGCCACCCAGCAGCGTaGGGACTGCCTGTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGARHPAA*GLPVRR
Trigger: ACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCG...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCCCCTTGGCCTCCTCCTaGGCCTGCCGCTTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GLGEKGTQWKTPPSPAPPPLASS*ACRLSA
Trigger: GGCGCTCAAGCGGCAGGCGCAGGAGGAGGCCAAGGG...GGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGCGCGCACGAGGTCCTaGACGAAGCGCATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPARTRS*TKRISE
Trigger: CTCCGAGATGCGCTTCGTGCAGGACCTCGTGCGCGC...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCCAGCAGCGCGCCCTTaGCCTCCTCCTGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AHSGRPHQARRHPAAWGLPAARP*PPPAPA
Trigger: GGCAGGCGCAGGAGGAGGCCAAGGGCGCGCTGCTGG...CAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCAGGCACCCGGGCGATaGGAGGCGCAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GPASARRAHSGRPHQARRQAPGR*EAQRPQ
Trigger: CTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTG...GCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGACCAGCCTGGTGGCGCTaGGCAAGGACAGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: AEGRSCLGVHRRDDGARGPAWWR*ARTGTR
Trigger: CCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGG...TCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCCCAGCCTGGTGGCGCTaGGCAAGGACAGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: AAEGRSCLGVHRRDDGARPAWWR*ARTGTR
Trigger: CCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGG...GCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAACCGCCTCCAGCCTGGTaGCGCTGGGCAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GAGQGQAPGRWEAQRPQEPPPAW*RWARTG
Trigger: GCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGGCGG...TTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCCGCCACCCAGCAGCGTaGGGACTGCCTGTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: AAEGRSCLGVHRRDDGARRHPAA*GLPVRR
Trigger: ACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCG...GCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp ATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACAGGCCCCACAGGCGCGACGATaGGGCTCGCGGAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: IRAASAPRWVPTLTVPQAPQARR*GSRRSP
Trigger: CGGACTCCTCCGCGAGCCCCATCGTCGCGCCTGTGG...GGCCTGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp GGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCCACGTCCTCCTGCCTaGACGTGGACATGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GPASARRAHSGRPHQARRPRPPA*TWTWRP
Trigger: CGGCCGCCATGTCCACGTTCAGGCAGGAGGACGTGG...GCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACGAGCAGCCGGCGAATaGAGTCCTTGGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSPAPPSSVGTACPPSIPRAAGE*SPWPAR
Trigger: GCGAGCTGGCCAAGGACTTCATTCGCCGGCTGCTCG...TGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCCGTACTCCTTGCCCGTaGCCTTCTGCCGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: GRWEAQRPQEAPPPQAELRTPCP*PSAGTS
Trigger: GGAAGTGCCGGCAGAAGGGCACGGGCAAGGAGTACG...GAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCCCCTGCAGCTTCTCCTaGTCCAGGGCGCGCACGAGG +
Preference number: 4 (lower is better)
Translates to: DRPRREGHTVEDPTKPGAPCSFS*SRARTR
Trigger: CCTCGTGCGCGCCCTGGAGCAGGAGAAGCTGCAGGG...GGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCTCCCACACCCACCCCTaGCTGCGAACTTACGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRWEAQRPQEAPPPQAELSHTHP*LRTYGP
Trigger: AGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGTGGGA...GAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCTCCCAACCCTCACGGTaGCACAGGCCACGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GQGQAPGRWEAQRPQEAPSQPSR*HRPRCL
Trigger: CAGGCAGCGTGGCCTGTGGCACCGTGAGGGTTGGGA...GGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAACATTCGGGCCGCCTCTaGGCCTCGGTGGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: GAGQGQAPGRWEAQRPQEHSGRL*ASVGPN
Trigger: GTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATG...TTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCACGAGGCCTGAACCAGGGCTaGATTCGGGCCGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: QQRGDCLSAVHPTLPVPRGLNQG*IRAASA
Trigger: CGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCC...TCGTGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCACGAGCAGAGGGCCGCTCTTaGCTAGGCGTCCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: QQRGDCLSAVHPTLPVPRAEGRS*LGVHRR
Trigger: GCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC...TCGTGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCCACTCCGCCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGTCACCCCACGCCGGCTaGATGACAGGCGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTPPPAWWRWARTGTRAMSPHAG*MTGGAS
Trigger: AGAAGCGCCGCCTGTCATCCAGCCGGCGTGGGGTGA...CATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGGCGGAGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCACTCCTTCAGACGCGTaGTCTTCAGGCGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GRWEAQRPQEAPPPQAELTPSDA*SSGAAA
Trigger: AGCGGCGGCGCCTGAAGACCACGCGTCTGAAGGAGT...GAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGGCCTGAACCAGGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACAGCCTCCGCAGGTCCTaGCCCAGGCTGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPEPGLHSGRLCASVGPNSLRRS*PRLSLS
Trigger: GGAGAGCGACAGCCTGGGCCAGGACCTGCGGAGGCT...GTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp TGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACACGAGCAGCCGGCGAATaGAGTCCTTGGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: WWRWARTGTRAMGGAASTRAAGE*SPWPAR
Trigger: GCGAGCTGGCCAAGGACTTCATTCGCCGGCTGCTCG...TGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CCACCCCTGCCTGCGAACTTACGGGCCTGGCTCCAGCTCCTCCCACTCCGCCTCACCCTCCTCCGGGCCTaGACCAGGGCTGCATTCGGG +
Preference number: 4 (lower is better)
Translates to: PPLPANLRAWLQLLPLRLTLLRA*TRAAFG
Trigger: CCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGT...GAGGCGGAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp ACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCAACCCTCCTCCGGGCCTaGACCAGGGCTGCATTCGGG +
Preference number: 4 (lower is better)
Translates to: TGLGEKGTQWKTPPSPAPTLLRA*TRAAFG
Trigger: CCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGT...TGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCCCCGCCTCGATCTTGTaGGCGATGCCGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPPASIL*AMPKSM
Trigger: CATCGACTTCGGCATCGCGCACAAGATCGAGGCGGG...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCATCCCACACCCACCCCTaGCTGCGAACTTACGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGASHTHP*LRTYGP
Trigger: AGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGTGGGA...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAATCCCAACCCTCACGGTaGCACAGGCCACGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GAGQGQAPGRWEAQRPQESQPSR*HRPRCL
Trigger: CAGGCAGCGTGGCCTGTGGCACCGTGAGGGTTGGGA...TTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCACCCCTGCCTGCGAACTTACGGGCCTGGCTCCAGCTCCTCCCACTCCGCCTCCATTCGGGCCGCCTCTaGGCCTCGGTGGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: PPLPANLRAWLQLLPLRLHSGRL*ASVGPN
Trigger: GTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATG...GAGGCGGAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp TGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACACGCACGATCGCAAACTaGCCGCTGCCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WWRWARTGTRAMGGAASTRTIAN*PLPSSS
Trigger: GGAGGAGCTGGGCAGCGGCCAGTTTGCGATCGTGCG...TGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGACGCACGATCGCAAACTaGCCGCTGCCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AEGRSCLGVHRRDDGARGRTIAN*PLPSSS
Trigger: GGAGGAGCTGGGCAGCGGCCAGTTTGCGATCGTGCG...TCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCACCTTCTCCTCGTAGATaGCGGCCAGCGCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGAPSPRR*RPAPPR
Trigger: ACGTGGAGGCGCTGGCCGCCATCTACGAGGAGAAGG...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCACCCCTGCCTGCGAACTTACGGGCCTGGCTCCAGCTCCTCCCACTCCGCCTCACAGGCCACGCTGCCTaGAGGGTCCCAGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: PPLPANLRAWLQLLPLRLTGHAA*RVPGSP
Trigger: CGGTGACCCTGGGACCCTCCAGGCAGCGTGGCCTGT...GAGGCGGAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp AGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGAGCCTCTGCGCCTCGGTaGGTCCCAACCCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: RAHSGRPHQARRHPAAWGASAPR*VPTLTV
Trigger: CACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGC...TCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp GTCTGTCGGGTGCTGGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCCGAGCAGCCGGCGAATaGAGTCCTTGGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: VCRVLDIPRPGPNPRHTGRAAGE*SPWPAR
Trigger: GCGAGCTGGCCAAGGACTTCATTCGCCGGCTGCTCG...GCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCAGCACCCGACAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR GCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCATCCTCCACGTCCTCCTaGCTGAACGTGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGASSTSS*LNVDMA
Trigger: CGCCATGTCCACGTTCAGGCAGGAGGACGTGGAGGA...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACATGGCTGCGTACTCCTTaGCCGTGCCCTTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LHSGRLCASVGPNPHGATWLRTP*PCPSAG
Trigger: GCCGGCAGAAGGGCACGGGCAAGGAGTACGCAGCCA...TGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAACGCCGTCCAGGATCTaGTTGAGGAACTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGATPSRI*LRNWVA
Trigger: GGCCACCCAGTTCCTCAAGCAGATCCTGGACGGCGT...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCCGCCTCGATCTTGTaGGCGATGCCGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: GQGQAPGRWEAQRPQEAPPASIL*AMPKSM
Trigger: CATCGACTTCGGCATCGCGCACAAGATCGAGGCGGG...GGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGCCCAGGAACGGGGATaGACCGCTCAGGAGGATATA +
Preference number: 4 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPAQERG*TAQEDI
Trigger: TATATCCTCCTGAGCGGTGCATCCCCGTTCCTGGGC...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGTCTTGAGCAGCTCCTaGCGTAGCCTCCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AAEGRSCLGVHRRDDGARVLSSS*RSLRRS
Trigger: GGACCTGCGGAGGCTACGGCAGGAGCTGCTCAAGAC...GCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp ACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCAGCGCGCACGAGGTCCTaGACGAAGCGCATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: TGLGEKGTQWKTPPSPAPARTRS*TKRISE
Trigger: CTCCGAGATGCGCTTCGTGCAGGACCTCGTGCGCGC...TGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCCGCACTCCACGCCCTaGAGCTTCTCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RREGHTVEDPTKPGATQQPHSTP*SFSCSR
Trigger: CCTGGAGCAGGAGAAGCTGCAGGGCGTGGAGTGCGG...CTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCCCGCACTCCACGCCCTaGAGCTTCTCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HTVEDPTKPGATQQRGDCPHSTP*SFSCSR
Trigger: CCTGGAGCAGGAGAAGCTGCAGGGCGTGGAGTGCGG...GCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCCAGCAGCGTGGGGACTaGCTGTCCGCCGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: GSTPPNCPCNYPQTLLRAQQRGD*LSAVHP
Trigger: GGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG...GGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCGCAGAGGGCCGCTCTTaGCTAGGCGTCCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: GSTPPNCPCNYPQTLLRAAEGRS*LGVHRR
Trigger: GCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC...GGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGTCACCCCACGCCGGCTaGATGACAGGCGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AHSGRPHQARRHPAAWGLSPHAG*MTGGAS
Trigger: AGAAGCGCCGCCTGTCATCCAGCCGGCGTGGGGTGA...CAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGACGGCGTAGCTGTTGTTaGGCGGCAAGCTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: AEGRSCLGVHRRDDGARGRRSCC*AASWSA
Trigger: CGCACTCCAGCTTGCCGCCCAACAACAGCTACGCCG...TCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCGGAGGCTACTTGCTTaGCCAGCGCCTCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: GPASARRAHSGRPHQARRRRLLA*PAPRSG
Trigger: ACCGCTACGAGGCGCTGGCCAAGCAAGTAGCCTCCG...GCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCCGGAGGCTACTTGCTTaGCCAGCGCCTCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: AAEGRSCLGVHRRDDGARRRLLA*PAPRSG
Trigger: ACCGCTACGAGGCGCTGGCCAAGCAAGTAGCCTCCG...GCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp GGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCAGACCAGCTCCAGGATaGGGACCACGTCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GLHSGRLCASVGPNPHGARPAPG*GPRPSC
Trigger: ACAAGACGGACGTGGTCCTCATCCTGGAGCTGGTCT...GGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp AAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGTTGCCCGTGCCCTTCTaGCGGCACTTCCGCACGATC +
Preference number: 4 (lower is better)
Translates to: KGTQWKTPPSPAPPSSVGLPVPF*RHFRTI
Trigger: GATCGTGCGGAAGTGCCGGCAGAAGGGCACGGGCAA...CCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp AAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGCGTACTCCTTGCCCGTaGCCTTCTGCCGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: KGTQWKTPPSPAPPSSVGRTPCP*PSAGTS
Trigger: GGAAGTGCCGGCAGAAGGGCACGGGCAAGGAGTACG...CCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGGCTGCGTACTCCTTaGCCGTGCCCTTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GSTPPNCPCNYPQTLLRAWLRTP*PCPSAG
Trigger: GCCGGCAGAAGGGCACGGGCAAGGAGTACGCAGCCA...GGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCCCAGGAACGGGGATaGACCGCTCAGGAGGATATA +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGAAQERG*TAQEDI
Trigger: TATATCCTCCTGAGCGGTGCATCCCCGTTCCTGGGC...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CACCCGGGGGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGACACCCACCCCTGCCTaGGAACTTACGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HPGDRPRREGHTVEDPTKTPTPA*ELTGLA
Trigger: AGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGT...CTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCCCCCGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCCAGGGTCACCGACGATaGAGGGGTGAAGGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLGEKGTQWKTPPSPAPPQGHRR*RGEGEG
Trigger: GCCTTCACCTTCACCCCTGCATCGTCGGTGACCCTG...GGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCAGCAGCGTGGGGACTaGCTGTCCGCCGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGQQRGD*LSAVHP
Trigger: GGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp TCTGTCGGGTGCTGGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCTCCTCGTGACGGAGACTaGCCAGCCCGACGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SVGCWTSHAQDPTPATQAPRDGD*PARRKA
Trigger: GGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGG...AGCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCAGCACCCGACAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp CCACCCCTGCCTGCGAACTTACGGGCCTGGCTCCAGCTCCTCCCACTCCGCCTCCGGCGTAGCTGTTGTTaGGCGGCAAGCTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: PPLPANLRAWLQLLPLRLRRSCC*AASWSA
Trigger: CGCACTCCAGCTTGCCGCCCAACAACAGCTACGCCG...GAGGCGGAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp AAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGCCTTCTCCTCGTAGATaGCGGCCAGCGCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: KGTQWKTPPSPAPPSSVGPSPRR*RPAPPR
Trigger: ACGTGGAGGCGCTGGCCGCCATCTACGAGGAGAAGG...CCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CACCCGGGGGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGGCGAACTTACGGGCCTaGCTCCAGCTCCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: HPGDRPRREGHTVEDPTKANLRA*LQLLPL
Trigger: GAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGC...CTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCCCCCGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp AGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGAGCGAACTTACGGGCCTaGCTCCAGCTCCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: RAHSGRPHQARRHPAAWGANLRA*LQLLPL
Trigger: GAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGC...TCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCCACGCCGGCTGGATaGCAGGCGGCGCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGPTPAG*QAALLD
Trigger: ATCAAGAAGCGCCGCCTGTCATCCAGCCGGCGTGGG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp GCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCTCTTGTCCAGCAGCATaGTGTTTTCCGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: APGRWEAQRPQEAPPPQASCPAA*CFPASG
Trigger: ACCTGAAGCCGGAAAACATCATGCTGCTGGACAAGA...GGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCATGCCGAAGATGTTCTTaGACTCGTTCCCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGACRRCS*TRSPPR
Trigger: TCGAGGCGGGGAACGAGTTCAAGAACATCTTCGGCA...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCACCCCTGCCTGCGAACTTACGGGCCTGGCTCCAGCTCCTCCCACTCCGCCTCCCACTCCAGGGAAAGTaGAGTCACCGCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPLPANLRAWLQLLPLRLPLQGK*SHRSLE
Trigger: CTCCAGGCTGCGGTGACTGCACTTTCCCTGGAGTGG...GAGGCGGAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp AAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACGCCGTCCAGGATCTaGTTGAGGAACTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KGTQWKTPPSPAPPSSVGTPSRI*LRNWVA
Trigger: GGCCACCCAGTTCCTCAAGCAGATCCTGGACGGCGT...CCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCTTGGTGAGCGTCTCCTaGTTGGTCTCGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GPASARRAHSGRPHQARRLVSVS*LVSPRN
Trigger: GTTCCTGGGCGAGACCAAGCAGGAGACGCTCACCAA...GCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp AGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGACACCCACCCCTGCCTaGGAACTTACGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RRAHSGRPHQARRHPAAWTPTPA*ELTGLA
Trigger: AGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGGGTGT...CCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCAGGCCTGAACCAGGGCTaGATTCGGGCCGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PRRIVRATTRKPSSGPEPGLNQG*IRAASA
Trigger: CGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCC...TGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCCGCCGAATTGTCCGTaGAACTACCCGCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: GCRGPLLPRRPQARRWGSPPNCP*NYPQTL
Trigger: GAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGG...CGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGATGAGCTTGATTCGTaGGTTGGGCACGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: APGRWEAQRPQEAPPPQADELDS*VGHVLV
Trigger: GACAAGAACGTGCCCAACCCACGAATCAAGCTCATC...GGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACACCCACGACCTCCTCCTaGGCTAATGGCAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LHSGRLCASVGPNPHGATPTTSS*ANGSNR
Trigger: CCTGTTGCTGCCATTAGCCCAGGAGGAGGTCGTGGG...TGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CACCCGGGGGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCACGACCTCCTCCTaGGCTAATGGCAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: HPGDRPRREGHTVEDPTKPTTSS*ANGSNR
Trigger: CCTGTTGCTGCCATTAGCCCAGGAGGAGGTCGTGGG...CTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCCCCCGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGGAGAAGGGCACACAGTaGAAGACCCCACCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: RREGHTVEDPTKPGATQQEKGTQ*KTPPSP
Trigger: CGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTC...CTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp AAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGGAGAAGGGCACACAGTaGAAGACCCCACCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: KGTQWKTPPSPAPPSSVGEKGTQ*KTPPSP
Trigger: CGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTC...CCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACACGGCTGAGATGTTGGTaGGCGTCTCCTGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LHSGRLCASVGPNPHGATRLRCW*ASPAWS
Trigger: AGACCAAGCAGGAGACGCTCACCAACATCTCAGCCG...TGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CACCCGGGGGACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCGGCTGAGATGTTGGTaGGCGTCTCCTGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HPGDRPRREGHTVEDPTKRLRCW*ASPAWS
Trigger: AGACCAAGCAGGAGACGCTCACCAACATCTCAGCCG...CTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTCCCCCGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp TGGCCCCAGGAGTCAGCCCCGTTGGACACACACCAGCCAAGGATGCCACCAGGTAGAGTCAACGCCTCGTaGCGGAGACTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: WPQESAPLDTHQPRMPPGRVNAS*RRLPSP
Trigger: CGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCT...ACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCTGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR GCA 90 bp GGGCCTGAACCAGGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCTTGATGAACTTGGCTaGGTACTCCTTGCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GPEPGLHSGRLCASVGPNLDELG*VLLARA
Trigger: GGCACGGGCAAGGAGTACGCAGCCAAGTTCATCAAG...GTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCCTTCAGGTCAAAGTGTaGGATGCGCTTAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPLQVKV*DALRVQ
Trigger: CTGCACTCTAAGCGCATCGCACACTTTGACCTGAAG...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp AAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGGGCGGCAAGCTGGAGTaGGACTTGATGGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: KGTQWKTPPSPAPPSSVGGGKLE*DLMVYS
Trigger: GGAGTACACCATCAAGTCGCACTCCAGCTTGCCGCC...CCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGGTCTTGAGCAGCTCCTaGCGTAGCCTCCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGVLSSS*RSLRRS
Trigger: GGACCTGCGGAGGCTACGGCAGGAGCTGCTCAAGAC...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACACCGCCGAATTGTCCGTaGAACTACCCGCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: LHSGRLCASVGPNPHGATPPNCP*NYPQTL
Trigger: GAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGG...TGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCCGGCTGTCCTGGGGTTTATTTCTCTTGGCTaGAGAGGGCCGCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AASTGSAPTAGRAPAVLGFISLG*RGPLLP
Trigger: AGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAA...CCCCAGGACAGCCGGAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp TGGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCTCACTCCTCTGGGCACACCAGCCAAGGATaGCACCAGGTCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: WTSHAQDPTPATQAHSSGHTSQG*HQVCRV
Trigger: CACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTG...CCCAGAGGAGTGAGCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp CACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCATCTGCTTGAGGAACTaGGTGGCCTCGTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: HTVEDPTKPGATQQRGDCICLRN*VASSSV
Trigger: GACGGAGGACGAGGCCACCCAGTTCCTCAAGCAGAT...GCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGAATGTTCCAGGCTCTaGGCAATGGTCATTCTCCGC +
Preference number: 4 (lower is better)
Translates to: PPAWWRWARTGTRAMGGAECSRL*AMVILR
Trigger: GCGGAGAATGACCATTGCCCAGAGCCTGGAACATTC...TGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CACCGACGATGCAGGGGTGAAGGTGAAGGCCAGCGTGGAGGCTGTGTAGAGAAGCAGGCACCCGGGCGATaGGAGGCGCAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HRRCRGEGEGQRGGCVEKQAPGR*EAQRPQ
Trigger: CTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTG...CTTCTCTACACAGCCTCCACGCTGGCCTTCACCTTCACCCCTGCATCGTCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CCCACTCCGCCTCCAGCCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGTCTTGTCCAGCAGCATaGTGTTTTCCGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PTPPPAWWRWARTGTRAMSCPAA*CFPASG
Trigger: ACCTGAAGCCGGAAAACATCATGCTGCTGGACAAGA...CATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGGCTGGAGGCGGAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGTGCCGAAGATGTTCTTaGACTCGTTCCCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: RREGHTVEDPTKPGATQQCRRCS*TRSPPR
Trigger: TCGAGGCGGGGAACGAGTTCAAGAACATCTTCGGCA...CTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCACTCCAGGGAAAGTaGAGTCACCGCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGPLQGK*SHRSLE
Trigger: CTCCAGGCTGCGGTGACTGCACTTTCCCTGGAGTGG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CTACCCGCAAACCCTCCTCCGGGCCTGAACCAGGGCTGCATTCGGGCCGCCTCTGTGATGATGTTGGGGTaGCGGATCTCCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LPANPPPGLNQGCIRAASVMMLG*RISRRM
Trigger: CATCCTGCGGGAGATCCGGCACCCCAACATCATCAC...AGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp TGGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCTCACTCCTCTGGGTTGGTGAGCGTCTCCTaGTTGGTCTCGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WTSHAQDPTPATQAHSSGLVSVS*LVSPRN
Trigger: GTTCCTGGGCGAGACCAAGCAGGAGACGCTCACCAA...CCCAGAGGAGTGAGCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR GCA 90 bp GGTTCAGGGGCTCATCCGGCAGCAGAGTCAACGCCTCGTGACGGAGACTGCCCAACCAGGTCTGTCGGGTaGTGGACATCCCACGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSGAHPAAESTPRDGDCPTRSVG*WTSHAQ
Trigger: CTGGGCGTGGGATGTCCAGCACCCGACAGACCTGGT...TGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTGCCGGATGAGCCCCTGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594894.1
3UTR CAA 72 bp TGGGCTAATGGCAGCAACAGGCAGCACCCCGCCGAATaGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: WANGSNRQHPAE*SVQLPANPPPG
Trigger: GCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGCTGCCATTAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CACCGACGATGCAGGGGTGAAGGTGAAGGCCAGCGTGGAGGCTGTGTAGAGAAGCCCACGCCGGCTGGATaGCAGGCGGCGCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: HRRCRGEGEGQRGGCVEKPTPAG*QAALLD
Trigger: ATCAAGAAGCGCCGCCTGTCATCCAGCCGGCGTGGG...CTTCTCTACACAGCCTCCACGCTGGCCTTCACCTTCACCCCTGCATCGTCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp GGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCGCTCGCTGGTGTTGCTaGAGTACTCCTCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: GSTPPNCPCNYPQTLLRAARWCC*STPRRS
Trigger: ACTTCGACGAGGAGTACTTCAGCAACACCAGCGAGC...GGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp TGGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCTCACTCCTCTGGGGCTCGCTGGTGTTGCTaGAGTACTCCTCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: WTSHAQDPTPATQAHSSGARWCC*STPRRS
Trigger: ACTTCGACGAGGAGTACTTCAGCAACACCAGCGAGC...CCCAGAGGAGTGAGCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR GCA 90 bp GGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCCTTGATGAACTTGGCTaGGTACTCCTTGCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GSTPPNCPCNYPQTLLRALDELG*VLLARA
Trigger: GGCACGGGCAAGGAGTACGCAGCCAAGTTCATCAAG...GGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp ATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACAGGCCGATGAGCTTGATTCGTaGGTTGGGCACGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: IRAASAPRWVPTLTVPQADELDS*VGHVLV
Trigger: GACAAGAACGTGCCCAACCCACGAATCAAGCTCATC...GGCCTGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCATAGTTCACAATCTCTaGGGCCACAAACTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GLGEKGTQWKTPPSPAPPIVHNL*GHKLRG
Trigger: ACCCCGGAGTTTGTGGCCCCAGAGATTGTGAACTAT...GGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp AGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGCCAGGCTCTGGGCAATaGTCATTCTCCGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RRAHSGRPHQARRHPAAWPGSGQ*SFSAWD
Trigger: ATCCCAAGCGGAGAATGACCATTGCCCAGAGCCTGG...CCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCACTCCTTCAGACGCGTaGTCTTCAGGCGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: ATGSTPPNCPCNYPQTLLTPSDA*SSGAAA
Trigger: AGCGGCGGCGCCTGAAGACCACGCGTCTGAAGGAGT...GAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTATTTTATTTCTCTTaGCTGCAGAGGGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPVFYFS*LQRAAL
Trigger: AAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATAC...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp GCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCTCCTCCACGTCCTCCTaGCTGAACGTGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: ATGSTPPNCPCNYPQTLLSSTSS*LNVDMA
Trigger: CGCCATGTCCACGTTCAGGCAGGAGGACGTGGAGGA...GAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACATTTATTTCTCTTGGCTaGAGAGGGCCGCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LHSGRLCASVGPNPHGATFISLG*RGPLLP
Trigger: AGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAA...TGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CAGGAGTCAGCCCCGTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGTCGTCTCGAGAAAAACGCTaGGGCCCTGGCCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: QESAPLDTHQPRMPPGLSSREKR*GPGPRS
Trigger: ACTCCTGGGGCCAGGGCCGCAGCGTTTTTCTCGAGA...CGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp CCCACCCTCCCCGTCCCACGACCTCCTCCTGGGCTAATGGCAGCAACAGGCAGCGAATGTTCCAGGCTCTaGGCAATGGTCATTCTCCGC +
Preference number: 4 (lower is better)
Translates to: PTLPVPRPPPGLMAATGSECSRL*AMVILR
Trigger: GCGGAGAATGACCATTGCCCAGAGCCTGGAACATTC...GCTGCCTGTTGCTGCCATTAGCCCAGGAGGAGGTCGTGGGACGGGGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCTCGTGACGGAGACTGCCCAGCCCGACGCAAAGCCGAGAGTGCTCTCTCGAGAACCCTCCCCAGCCACTaGGGGTTGTCACATCCACAA +
Preference number: 4 (lower is better)
Translates to: PRDGDCPARRKAESALSRTLPSH*GLSHPQ
Trigger: TTGTGGATGTGACAACCCCCAGTGGCTGGGGAGGGT...TCTCGAGAGAGCACTCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp CCCCAGGAGTCAGCCCCGTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGAGGAGTCAGCCCCGTTaGACACACACCAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PQESAPLDTHQPRMPPGLRSQPR*THTSQG
Trigger: TCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCT...CAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR TCA 90 bp CCGTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGTCGGGTGCTGGACATCCTGCCAGTGTGAACTaGGGTTCAGGGGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: PLDTHQPRMPPGLSGAGHPASVN*GSGAHP
Trigger: CGGATGAGCCCCTGAACCTCAGTTCACACTGGCAGG...ATGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR GCA 90 bp CCCACCCTCCCCGTCCCACGACCTCCTCCTGGGCTAATGGCAGCAACAGGCAGCTTCTCGAAGATGTCGTaGAGGGTGATGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PTLPVPRPPPGLMAATGSFSKMS*RVMMLG
Trigger: CCCCAACATCATCACCCTGCACGACATCTTCGAGAA...GCTGCCTGTTGCTGCCATTAGCCCAGGAGGAGGTCGTGGGACGGGGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CACCGACGATGCAGGGGTGAAGGTGAAGGCCAGCGTGGAGGCTGTGTAGAGAAGCAGGGTCACCGACGATaGAGGGGTGAAGGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: HRRCRGEGEGQRGGCVEKQGHRR*RGEGEG
Trigger: GCCTTCACCTTCACCCCTGCATCGTCGGTGACCCTG...CTTCTCTACACAGCCTCCACGCTGGCCTTCACCTTCACCCCTGCATCGTCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCACCAGGCTCTGGGCAATaGTCATTCTCCGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PRRIVRATTRKPSSGPEPPGSGQ*SFSAWD
Trigger: ATCCCAAGCGGAGAATGACCATTGCCCAGAGCCTGG...TGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CGGAGACTGCCCAGCCCGACGCAAAGCCGAGAGTGCTCTCTCGAGAAAAACGCTCGGCTGAGATGTTGGTaGGCGTCTCCTGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RRLPSPTQSRECSLEKNARLRCW*ASPAWS
Trigger: AGACCAAGCAGGAGACGCTCACCAACATCTCAGCCG...AGCGTTTTTCTCGAGAGAGCACTCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR TCA 90 bp GCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCGTCGTAGTTCACGGCTaGGATGTTGGTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: ATGSTPPNCPCNYPQTLLVVVHG*DVGERL
Trigger: GAGACGCTCACCAACATCTCAGCCGTGAACTACGAC...GAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CCCGTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGTCGGGTGCTGGACAGTCGTAGTTCACGGCTaGGATGTTGGTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: PVGHTPAKDATRSVGCWTVVVHG*DVGERL
Trigger: GAGACGCTCACCAACATCTCAGCCGTGAACTACGAC...TGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR GCA 90 bp CGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCAGGGCTGCATTCGGGCCTTCAGGTCAAAGTGTaGGATGCGCTTAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RATTRKPSSGPEPGLHSGLQVKV*DALRVQ
Trigger: CTGCACTCTAAGCGCATCGCACACTTTGACCTGAAG...GCCCGAATGCAGCCCTGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CACCGACGATGCAGGGGTGAAGGTGAAGGCCAGCGTGGAGGCTGTGTAGAGAAGTTGGTGAGCGTCTCCTaGTTGGTCTCGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HRRCRGEGEGQRGGCVEKLVSVS*LVSPRN
Trigger: GTTCCTGGGCGAGACCAAGCAGGAGACGCTCACCAA...CTTCTCTACACAGCCTCCACGCTGGCCTTCACCTTCACCCCTGCATCGTCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCCGTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGTCGGGTGCTGGACACCAGGCTCTGGGCAATaGTCATTCTCCGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PVGHTPAKDATRSVGCWTPGSGQ*SFSAWD
Trigger: ATCCCAAGCGGAGAATGACCATTGCCCAGAGCCTGG...TGTCCAGCACCCGACAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp GGTTCAGGGGCTCATCCGGCAGCAGAGTCAACGCCTCGTGACGGAGACTGCCCAGAATGTTCCAGGCTCTaGGCAATGGTCATTCTCCGC +
Preference number: 4 (lower is better)
Translates to: GSGAHPAAESTPRDGDCPECSRL*AMVILR
Trigger: GCGGAGAATGACCATTGCCCAGAGCCTGGAACATTC...TGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTGCCGGATGAGCCCCTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp TCTGGAAGCCAGTATTTTATTTCTCTTGGCTGCAGAGGGCCGCTCTTGCCTAGGCCACAGGCGCGACGATaGGGCTCGCGGAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: SGSQYFISLGCRGPLLPRPQARR*GSRRSP
Trigger: CGGACTCCTCCGCGAGCCCCATCGTCGCGCCTGTGG...CCTAGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACTGGCTTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp CCACCCCTGCCTGCGAACTTACGGGCCTGGCTCCAGCTCCTCCCACTCCGCCTCGTATTTTATTTCTCTTaGCTGCAGAGGGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPLPANLRAWLQLLPLRLVFYFS*LQRAAL
Trigger: AAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATAC...GAGGCGGAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
3UTR CAA 72 bp CAGTATTTTATTTCTCTTGGCTGCAGAGGGCCGCTCTaGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QYFISLGCRGPL*PRRPQARRWGS
Trigger: CGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CACCGACGATGCAGGGGTGAAGGTGAAGGCCAGCGTGGAGGCTGTGTAGAGAAGGTCGTAGTTCACGGCTaGGATGTTGGTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: HRRCRGEGEGQRGGCVEKVVVHG*DVGERL
Trigger: GAGACGCTCACCAACATCTCAGCCGTGAACTACGAC...CTTCTCTACACAGCCTCCACGCTGGCCTTCACCTTCACCCCTGCATCGTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR TCA 90 bp CACCGACGATGCAGGGGTGAAGGTGAAGGCCAGCGTGGAGGCTGTGTAGAGAAGGCTCGCTGGTGTTGCTaGAGTACTCCTCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: HRRCRGEGEGQRGGCVEKARWCC*STPRRS
Trigger: ACTTCGACGAGGAGTACTTCAGCAACACCAGCGAGC...CTTCTCTACACAGCCTCCACGCTGGCCTTCACCTTCACCCCTGCATCGTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCATTCTCGAAGATGTCGTaGAGGGTGATGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PRRIVRATTRKPSSGPEPFSKMS*RVMMLG
Trigger: CCCCAACATCATCACCCTGCACGACATCTTCGAGAA...TGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp CCGACGCAAAGCCGAGAGTGCTCTCTCGAGAAAAACGCTGCGGCCCTGGCCCCAACGCAAAGCCGAGAGTaGTCTCTCGAGAAAAACGCT +
Preference number: 4 (lower is better)
Translates to: PTQSRECSLEKNAAALAPTQSRE*SLEKNA
Trigger: AGCGTTTTTCTCGAGAGAGCACTCTCGGCTTTGCGT...TGGGGCCAGGGCCGCAGCGTTTTTCTCGAGAGAGCACTCTCGGCTTTGCGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CCA 90 bp CCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCAATAGTTCACAATCTCTaGGGCCACAAACTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PRRIVRATTRKPSSGPEPIVHNL*GHKLRG
Trigger: ACCCCGGAGTTTGTGGCCCCAGAGATTGTGAACTAT...TGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CCA 90 bp TCTGGAAGCCAGTATTTTATTTCTCTTGGCTGCAGAGGGCCGCTCTTGCCTAGGGCCTCTGCGCCTCGGTaGGTCCCAACCCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: SGSQYFISLGCRGPLLPRASAPR*VPTLTV
Trigger: CACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGC...CCTAGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACTGGCTTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp TCTGGAAGCCAGTATTTTATTTCTCTTGGCTGCAGAGGGCCGCTCTTGCCTAGGGTGATGATGTTGGGGTaGCGGATCTCCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SGSQYFISLGCRGPLLPRVMMLG*RISRRM
Trigger: CATCCTGCGGGAGATCCGGCACCCCAACATCATCAC...CCTAGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACTGGCTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR GCA 90 bp TCTGGAAGCCAGTATTTTATTTCTCTTGGCTGCAGAGGGCCGCTCTTGCCTAGGGGCGGCAAGCTGGAGTaGGACTTGATGGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SGSQYFISLGCRGPLLPRGGKLE*DLMVYS
Trigger: GGAGTACACCATCAAGTCGCACTCCAGCTTGCCGCC...CCTAGGCAAGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACTGGCTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCCGGCTGAAGCGGCGCTaGAGGCCGCTGGTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPRLKRR*RPLVPS
Trigger: GCTGGGGACCAGCGGCCTCAAGCGCCGCTTCAGCCG...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GGGCCTGAACCAGGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCCAGCAGCGCGCCCTaGGCCTCCTCCTGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: GPEPGLHSGRLCASVGPNPSSAP*ASSCAC
Trigger: GCAGGCGCAGGAGGAGGCCAAGGGCGCGCTGCTGGG...GTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCCTGGTTCAGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CCACCCCTGCCTGCGAACTTACGGGCCTGGCTCCAGCTCCTCCCACTCCGCCTCCGCCGCCGCTCGGGCTaGCGGCCGCTGTCCTCACCA +
Preference number: 5 (lower is better)
Translates to: PPLPANLRAWLQLLPLRLRRRSG*RPLSSP
Trigger: TGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGCG...GAGGCGGAGTGGGAGGAGCTGGAGCCAGGCCCGTAAGTTCGCAGGCAGGGGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS GCA 90 bp CGCTTGAGGCCGCTGGTCCCCAGCAGCGCGCCCTTGGCCTCCTCCTaGGCCTGCCGCTTGAGCGCCTCGGTCTTGAGCAGCTCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: RLRPLVPSSAPLASS*ACRLSASVLSSSCR
Trigger: ACGGCAGGAGCTGCTCAAGACCGAGGCGCTCAAGCGGCAGGCGCAGGAGGAGGCCAAGGGCGCGCTGCTGGGGACCAGCGGCCTCAAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS-3UTR CAA 90 bp AGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACGGCTGAAGCGGCGCTaGAGGCCGCTGGTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RAHSGRPHQARRHPAAWGRLKRR*RPLVPS
Trigger: GCTGGGGACCAGCGGCCTCAAGCGCCGCTTCAGCCG...TCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCTTCCCCGCCTCGATCTaGTGCGCGATGCCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPFPASI*CAMPKS
Trigger: CGACTTCGGCATCGCGCACAAGATCGAGGCGGGGAA...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCGCCGCCGCTCGGGCTaGCGGCCGCTGTCCTCACCA +
Preference number: 5 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGRRRSG*RPLSSP
Trigger: TGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGCG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGCCTCCTCCAGCACCTaGGAGAAGCGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GATQQRGDCLSAVHPTLPASSST*EKRSKS
Trigger: CGACTTCGAGCGCTTCTCCAAGGTGCTGGAGGAGGC...GGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGATGCAGAGGGCCGCTCTaGCCTAGGCGTCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: AEGRSCLGVHRRDDGARGCRGPL*PRRPQA
Trigger: CGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCA...TCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS GCA 90 bp TGTACTCCTTCAGACGCGTGGTCTTCAGGCGCCGCCGCTCGGGCTTaGGGCCGCTGTCCTCACCACGCACGTTCCGCCGCCGGATCGCCT +
Preference number: 5 (lower is better)
Translates to: CTPSDAWSSGAAARA*GRCPHHARSAAGSP
Trigger: AGGCGATCCGGCGGCGGAACGTGCGTGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGCGCCTGAAGACCACGCGTCTGAAGGAGTACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS-3UTR CAA 90 bp TGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACATTGGCTGCGTACTCCTaGCCCGTGCCCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: WWRWARTGTRAMGGAASTLAAYS*PVPFCR
Trigger: CCGGCAGAAGGGCACGGGCAAGGAGTACGCAGCCAA...TGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGTGAGCGTCTCCTGCTaGGTCTCGCCCAGGAACGGG +
Preference number: 5 (lower is better)
Translates to: GAGQGQAPGRWEAQRPQEVSVSC*VSPRNG
Trigger: CCCGTTCCTGGGCGAGACCAAGCAGGAGACGCTCAC...TTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCAGCCTCCTCCAGCACCTaGGAGAAGCGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PSPAPPSSVGTACPPSIPASSST*EKRSKS
Trigger: CGACTTCGAGCGCTTCTCCAAGGTGCTGGAGGAGGC...TGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCCGGCTGTCCTGGGCATCTCGGAGGCTACTaGCTTGGCCAGCGCCTCGTA +
Preference number: 5 (lower is better)
Translates to: RSVHRKRPHRRPSSGCPGHLGGY*LGQRLV
Trigger: TACGAGGCGCTGGCCAAGCAAGTAGCCTCCGAGATG...CCCAGGACAGCCGGAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GGGCTGCATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCCAGCACCCCGCCGAATaGTCCGTGCAACTACCCGCA +
Preference number: 5 (lower is better)
Translates to: GLHSGRLCASVGPNPHGAQHPAE*SVQLPA
Trigger: TGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTG...GGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAATGCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp ACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCAGTGAGCGTCTCCTGCTaGGTCTCGCCCAGGAACGGG +
Preference number: 5 (lower is better)
Translates to: TGLGEKGTQWKTPPSPAPVSVSC*VSPRNG
Trigger: CCCGTTCCTGGGCGAGACCAAGCAGGAGACGCTCAC...TGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCTTCACGGCTGAGATGTaGGTGAGCGTCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: APGRWEAQRPQEAPPPQAFTAEM*VSVSCL
Trigger: CAAGCAGGAGACGCTCACCAACATCTCAGCCGTGAA...GGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCACGATTGAGCGCCTCGGTCTaGAGCAGCTCCTGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: QQRGDCLSAVHPTLPVPRLSASV*SSSCRS
Trigger: GCTACGGCAGGAGCTGCTCAAGACCGAGGCGCTCAA...TCGTGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACATCTCGGAGGCTACTaGCTTGGCCAGCGCCTCGTA +
Preference number: 5 (lower is better)
Translates to: PGGAGQGQAPGRWEAQRPHLGGY*LGQRLV
Trigger: TACGAGGCGCTGGCCAAGCAAGTAGCCTCCGAGATG...TGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp AGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGTGCAGAGGGCCGCTCTaGCCTAGGCGTCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: RRAHSGRPHQARRHPAAWCRGPL*PRRPQA
Trigger: CGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCA...CCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS GCA 90 bp TCCACGCCCTGCAGCTTCTCCTGCTCCAGGGCGCGCACGAGGTCCTaGACGAAGCGCATCTCGGAGGCTACTTGCTTGGCCAGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: STPCSFSCSRARTRS*TKRISEATCLASAS
Trigger: CGAGGCGCTGGCCAAGCAAGTAGCCTCCGAGATGCGCTTCGTGCAGGACCTCGTGCGCGCCCTGGAGCAGGAGAAGCTGCAGGGCGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS-3UTR CAA 90 bp CGCAGCGTCCACAGGAAGCGCCCCCACCGCAGGCCGAGCTCCGGCTGTCCTGGGAGGACCACGTCCGTCTaGTTCTCGAAGATGTCGTGC +
Preference number: 5 (lower is better)
Translates to: RSVHRKRPHRRPSSGCPGRTTSV*FSKMSC
Trigger: GCACGACATCTTCGAGAACAAGACGGACGTGGTCCT...CCCAGGACAGCCGGAGCTCGGCCTGCGGTGGGGGCGCTTCCTGTGGACGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp TGTCGGGTGCTGGACATCCCACGCCCAGGACCCAACCCCCGCCACACAGGCTCAGTGAGCGTCTCCTGCTaGGTCTCGCCCAGGAACGGG +
Preference number: 5 (lower is better)
Translates to: CRVLDIPRPGPNPRHTGSVSVSC*VSPRNG
Trigger: CCCGTTCCTGGGCGAGACCAAGCAGGAGACGCTCAC...TGAGCCTGTGTGGCGGGGGTTGGGTCCTGGGCGTGGGATGTCCAGCACCCGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CAA 90 bp ATTCGGGCCGCCTCTGCGCCTCGGTGGGTCCCAACCCTCACGGTGCCACAGGCCCTCCGCTTGGGATCTTaGACGAGCAGCCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: IRAASAPRWVPTLTVPQALRLGS*TSSRRM
Trigger: CATTCGCCGGCTGCTCGTCAAAGATCCCAAGCGGAG...GGCCTGTGGCACCGTGAGGGTTGGGACCCACCGAGGCGCAGAGGCGGCCCGAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp TGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGCTCCGCTTGGGATCTTaGACGAGCAGCCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: CRGPLLPRRPQARRWGSRLRLGS*TSSRRM
Trigger: CATTCGCCGGCTGCTCGTCAAAGATCCCAAGCGGAG...CCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp AGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGATTGAGCGCCTCGGTCTaGAGCAGCTCCTGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: RAHSGRPHQARRHPAAWGLSASV*SSSCRS
Trigger: GCTACGGCAGGAGCTGCTCAAGACCGAGGCGCTCAA...TCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CCTGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCAAGCTTGATTCGTGGGTaGGGCACGTTCTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGGAGQGQAPGRWEAQRPSLIRG*GTFLSS
Trigger: GCTGGACAAGAACGTGCCCAACCCACGAATCAAGCT...TGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GCTGCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCCCGAAGTCGATGAGCTaGATTCGTGGGTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: AAEGRSCLGVHRRDDGARPKSMS*IRGLGT
Trigger: CGTGCCCAACCCACGAATCAAGCTCATCGACTTCGG...GCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCGTGCCGAAGATGTTCTaGAACTCGTTCCCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: DRPRREGHTVEDPTKPGAVPKMF*NSFPAS
Trigger: CGAGGCGGGGAACGAGTTCAAGAACATCTTCGGCAC...GGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCACGAAGGACCACGTCCGTCTaGTTCTCGAAGATGTCGTGC +
Preference number: 5 (lower is better)
Translates to: QQRGDCLSAVHPTLPVPRRTTSV*FSKMSC
Trigger: GCACGACATCTTCGAGAACAAGACGGACGTGGTCCT...TCGTGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp TGGTGGCGCTGGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACATTCACGGCTGAGATGTaGGTGAGCGTCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: WWRWARTGTRAMGGAASTFTAEM*VSVSCL
Trigger: CAAGCAGGAGACGCTCACCAACATCTCAGCCGTGAA...TGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCCAGCGCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GGGCAAGGACAGGCACCCGGGCGATGGGAGGCGCAGCGTCCACAGGAAGCGCCCATGGTCATTCTCCGCTaGGGATCTTTGACGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GQGQAPGRWEAQRPQEAPMVILR*GSLTSS
Trigger: GCTGCTCGTCAAAGATCCCAAGCGGAGAATGACCAT...GGGCGCTTCCTGTGGACGCTGCGCCTCCCATCGCCCGGGTGCCTGTCCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCAGCACCCCGCCGAATaGTCCGTGCAACTACCCGCA +
Preference number: 5 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGQHPAE*SVQLPA
Trigger: TGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCTTGGCTGCGTACTCCTaGCCCGTGCCCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ATGSTPPNCPCNYPQTLLLAAYS*PVPFCR
Trigger: CCGGCAGAAGGGCACGGGCAAGGAGTACGCAGCCAA...GAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCTGAACCACCGTCCAGGATCTGCTaGAGGAACTGGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PRRIVRATTRKPSSGPEPPSRIC*RNWVAS
Trigger: CGAGGCCACCCAGTTCCTCAAGCAGATCCTGGACGG...TGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCGGGTTGGGCACGTTCTaGTCCAGCAGCATGATGTTT +
Preference number: 5 (lower is better)
Translates to: DRPRREGHTVEDPTKPGAGLGTF*SSSMMF
Trigger: AAACATCATGCTGCTGGACAAGAACGTGCCCAACCC...GGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGCCGAAGTCGATGAGCTaGATTCGTGGGTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGPKSMS*IRGLGT
Trigger: CGTGCCCAACCCACGAATCAAGCTCATCGACTTCGG...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCTTCCCCGCCTCGATCTaGTGCGCGATGCCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: ATGSTPPNCPCNYPQTLLFPASI*CAMPKS
Trigger: CGACTTCGGCATCGCGCACAAGATCGAGGCGGGGAA...GAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GACGCAAAGCCGAGAGTGCTCTCTCGAGAAAAACGCTGCGGCCCTGGCCCCAGGCTCCGCTTGGGATCTTaGACGAGCAGCCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: DAKPRVLSREKRCGPGPRLRLGS*TSSRRM
Trigger: CATTCGCCGGCTGCTCGTCAAAGATCCCAAGCGGAG...CCTGGGGCCAGGGCCGCAGCGTTTTTCTCGAGAGAGCACTCTCGGCTTTGCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CAA 90 bp GCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGATGGTCATTCTCCGCTaGGGATCTTTGACGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AHSGRPHQARRHPAAWGLMVILR*GSLTSS
Trigger: GCTGCTCGTCAAAGATCCCAAGCGGAGAATGACCAT...CAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GACCGGCCTCGGCGAGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCAAGCTGGAGTGCGACTaGATGGTGTACTCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: DRPRREGHTVEDPTKPGAKLECD*MVYSFR
Trigger: TCTGAAGGAGTACACCATCAAGTCGCACTCCAGCTT...GGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCTCGCCGAGGCCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS TCA 90 bp CGAAGTCGGCGTAGCTGTTGTTGGGCGGCAAGCTGGAGTGCGACTTaGTGGTGTACTCCTTCAGACGCGTGGTCTTCAGGCGCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RSRRSCCWAASWSAT*WCTPSDAWSSGAAA
Trigger: AGCGGCGGCGCCTGAAGACCACGCGTCTGAAGGAGTACACCATCAAGTCGCACTCCAGCTTGCCGCCCAACAACAGCTACGCCGACTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS-3UTR CAA 90 bp AGAAGGGCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGGTTGGGCACGTTCTaGTCCAGCAGCATGATGTTT +
Preference number: 5 (lower is better)
Translates to: RRAHSGRPHQARRHPAAWGLGTF*SSSMMF
Trigger: AAACATCATGCTGCTGGACAAGAACGTGCCCAACCC...CCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGCCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCTCCGGGAGCTTGATTCGTGGGTaGGGCACGTTCTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QAAPRRIVRATTRKPSSGSLIRG*GTFLSS
Trigger: GCTGGACAAGAACGTGCCCAACCCACGAATCAAGCT...CCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GCACACAGTGGAAGACCCCACCAAGCCCGGCGCCACCCAGCAGCGTGGGGACTGAAGCTGGAGTGCGACTaGATGGTGTACTCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: AHSGRPHQARRHPAAWGLKLECD*MVYSFR
Trigger: TCTGAAGGAGTACACCATCAAGTCGCACTCCAGCTT...CAGTCCCCACGCTGCTGGGTGGCGCCGGGCTTGGTGGGGTCTTCCACTGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGCAGCGTGGGGACTGCCTGTCCGCCGTCCATCCCACCCTCCCCGTCCCACGAAGTATTTTATTTCTCTaGGCTGCAGAGGGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: QQRGDCLSAVHPTLPVPRSILFL*AAEGRS
Trigger: AGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACT...TCGTGGGACGGGGAGGGTGGGATGGACGGCGGACAGGCAGTCCCCACGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp GCAGAGGGCCGCTCTTGCCTAGGCGTCCACAGGCGCGACGATGGGGCTCGCGGAAGTATTTTATTTCTCTaGGCTGCAGAGGGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: AEGRSCLGVHRRDDGARGSILFL*AAEGRS
Trigger: AGAGCGGCCCTCTGCAGCCAAGAGAAATAAAATACT...TCCGCGAGCCCCATCGTCGCGCCTGTGGACGCCTAGGCAAGAGCGGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CAGCAGAGTCAACGCCTCGTGACGGAGACTGCCCAGCCCGACGCAAAGCCGAGACCCAGCCACTGGGGGTaGTCACATCCACAAGCCTTA +
Preference number: 5 (lower is better)
Translates to: QQSQRLVTETAQPDAKPRPSHWG*SHPQAL
Trigger: TAAGGCTTGTGGATGTGACAACCCCCAGTGGCTGGG...TCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CAA 90 bp CAGCAACAGGCAGCACCCCGCCGAATTGTCCGTGCAACTACCCGCAAACCCTCCGTGCCGAAGATGTTCTaGAACTCGTTCCCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: QQQAAPRRIVRATTRKPSVPKMF*NSFPAS
Trigger: CGAGGCGGGGAACGAGTTCAAGAACATCTTCGGCAC...GGAGGGTTTGCGGGTAGTTGCACGGACAATTCGGCGGGGTGCTGCCTGTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS-3UTR CAA 90 bp CCCCAGGAGTCAGCCCCGTTGGACACACACCAGCCAAGGATGCCACCAGGTCTGTTCACGGCTGAGATGTaGGTGAGCGTCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PQESAPLDTHQPRMPPGLFTAEM*VSVSCL
Trigger: CAAGCAGGAGACGCTCACCAACATCTCAGCCGTGAA...CAGACCTGGTGGCATCCTTGGCTGGTGTGTGTCCAACGGGGCTGACTCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS-3UTR CAA 90 bp CAGCAGAGTCAACGCCTCGTGACGGAGACTGCCCAGCCCGACGCAAAGCCGAGAATGGTCATTCTCCGCTaGGGATCTTTGACGAGCAGC +
Preference number: 5 (lower is better)
Translates to: QQSQRLVTETAQPDAKPRMVILR*GSLTSS
Trigger: GCTGCTCGTCAAAGATCCCAAGCGGAGAATGACCAT...TCTCGGCTTTGCGTCGGGCTGGGCAGTCTCCGTCACGAGGCGTTGACTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594894.1
CDS GCA 90 bp GGGGTGCCGAAGATGTTCTTGAACTCGTTCCCCGCCTCGATCTTGTaGGCGATGCCGAAGTCGATGAGCTTGATTCGTGGGTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: GVPKMFLNSFPASIL*AMPKSMSLIRGLGT
Trigger: CGTGCCCAACCCACGAATCAAGCTCATCGACTTCGGCATCGCGCACAAGATCGAGGCGGGGAACGAGTTCAAGAACATCTTCGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS TCA 90 bp GCTGGTGTTGCTGAAGTACTCCTCGTCGAAGTCGTAGTTCACGGCTaGGATGTTGGTGAGCGTCTCCTGCTTGGTCTCGCCCAGGAACGG +
Preference number: 5 (lower is better)
Translates to: AGVAEVLLVEVVVHG*DVGERLLLGLAQER
Trigger: CCGTTCCTGGGCGAGACCAAGCAGGAGACGCTCACCAACATCTCAGCCGTGAACTACGACTTCGACGAGGAGTACTTCAGCAACACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000594894.1
ENST00000595279.1
CDS GCA 72 bp TCAGACGCGTGGTCTTCAGGCGCCGCCGCTCGGGCTTaGGGCCGCTGTCCTCACCACGCACGTTCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: SDAWSSGAAARA*GRCPHHARSAA
Trigger: GGCGGCGGAACGTGCGTGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGCGCCTGAAGACCACGCGTCTGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS CAA 72 bp TTCAGACGCGTGGTCTTCAGGCGCCGCCGCTCGGGCTaGCGGCCGCTGTCCTCACCACGCACGTTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: FRRVVFRRRRSG*RPLSSPRTFRR
Trigger: GCGGCGGAACGTGCGTGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGCGCCTGAAGACCACGCGTCTGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS CAA 90 bp GTGTACTCCTTCAGACGCGTGGTCTTCAGGCGCCGCCGCTCGGGCTaGCGGCCGCTGTCCTCACCACGCACGTTCCGCCGCCGGATCGCC +
Preference number: 6 (lower is better)
Translates to: VYSFRRVVFRRRRSG*RPLSSPRTFRRRIA
Trigger: GGCGATCCGGCGGCGGAACGTGCGTGGTGAGGACAGCGGCCGCAAGCCCGAGCGGCGGCGCCTGAAGACCACGCGTCTGAAGGAGTACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS GCA 72 bp GCCTGCCGCTTGAGCGCCTCGGTCTTGAGCAGCTCCTaGCGTAGCCTCCGCAGGTCCTGGCCCAGGCTGTCG +
Preference number: 6 (lower is better)
Translates to: ACRLSASVLSSS*RSLRRSWPRLS
Trigger: CGACAGCCTGGGCCAGGACCTGCGGAGGCTACGGCAGGAGCTGCTCAAGACCGAGGCGCTCAAGCGGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS GCA 72 bp GAGCGTCTCCTGCTTGGTCTCGCCCAGGAACGGGGATaGACCGCTCAGGCTGCGAGACAGGCGTGGGGGCTC +
Preference number: 6 (lower is better)
Translates to: ERLLLGLAQERG*TAQAARQAWGL
Trigger: GAGCCCCCACGCCTGTCTCGCAGCCTGAGCGGTGCATCCCCGTTCCTGGGCGAGACCAAGCAGGAGACGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595279.1
CDS CAA 90 bp CAGGGCGCGCACGAGGTCCTGCACGAAGCGCATCTCGGAGGCTACTaGCTTGGCCAGCGCCTCGTAGCGGTTCTCCAGGCGGCTGAAGCG +
Preference number: 6 (lower is better)
Translates to: QGAHEVLHEAHLGGY*LGQRLVAVLQAAEA
Trigger: CGCTTCAGCCGCCTGGAGAACCGCTACGAGGCGCTGGCCAAGCAAGTAGCCTCCGAGATGCGCTTCGTGCAGGACCTCGTGCGCGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS CCA 72 bp TCTCCTCGCGGTACCAGGCCTCCTTCTCCTCGTAGATaGCGGCCAGCGCCTCCACGTCCTCGTGGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SPRGTRPPSPRR*RPAPPRPRGRA
Trigger: GGCTCTGCCACGAGGACGTGGAGGCGCTGGCCGCCATCTACGAGGAGAAGGAGGCCTGGTACCGCGAGGAGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS TCA 72 bp GCAGTGAGAGGCCCCAACAGCGTCTGCCTCCCAGCCTaGCGCTGGGAGGGTGACACAGCATCATCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AVRGPNSVCLPA*RWEGDTASSLG
Trigger: CCCCAGGGATGATGCTGTGTCACCCTCCCAGCGTCAGGCTGGGAGGCAGACGCTGTTGGGGCCTCTCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595279.1
CDS CAA 72 bp CACGAGGTCCTGCACGAAGCGCATCTCGGAGGCTACTaGCTTGGCCAGCGCCTCGTAGCGGTTCTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: HEVLHEAHLGGY*LGQRLVAVLQA
Trigger: CGCCTGGAGAACCGCTACGAGGCGCTGGCCAAGCAAGTAGCCTCCGAGATGCGCTTCGTGCAGGACCTCGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS TCA 72 bp CCCCCATCTCATAATGGTCCTCCACGTCCTCCTGCCTaGACGTGGACATGGCGGCCGGTCCGCCTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PPSHNGPPRPPA*TWTWRPVRLPA
Trigger: TGCTGGAAGGCGGACCGGCCGCCATGTCCACGTTCAGGCAGGAGGACGTGGAGGACCATTATGAGATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000593844.1
ENST00000596311.5
ENST00000601824.1
CDS CCA 72 bp AGGCGGAGCACAGAAGACAGGCTGACGGCAGGTGCCTaGGCCACTCACACTCCTGAGCCCTTAGAACCTTCC +
Preference number: 6 (lower is better)
Translates to: RRSTEDRLTAGA*ATHTPEPLEPS
Trigger: GGAAGGTTCTAAGGGCTCAGGAGTGTGAGTGGCCCAGGCACCTGCCGTCAGCCTGTCTTCTGTGCTCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595279.1
CDS TCA 72 bp CCTCGTCGAAGTCGTAGTTCACGGCTGAGATGTTGGTaGGCGTCTCCTGCTTGGTCTCGCCCAGGAACGGGG +
Preference number: 6 (lower is better)
Translates to: PRRSRSSRLRCW*ASPAWSRPGTG
Trigger: CCCCGTTCCTGGGCGAGACCAAGCAGGAGACGCTCACCAACATCTCAGCCGTGAACTACGACTTCGACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000594894.1
ENST00000595279.1
CDS TCA 72 bp CAACAGCGTCTGCCTCCCAGCCTGACGCTGGGAGGGTaGCACAGCATCATCCCTGGGGTTTTGAGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: QQRLPPSLTLGG*HSIIPGVLSRD
Trigger: GTCTCTGCTCAAAACCCCAGGGATGATGCTGTGTCACCCTCCCAGCGTCAGGCTGGGAGGCAGACGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595279.1
CDS GCA 72 bp GAGCGTCTCCTGCTTGGTCTCGCCCAGGAACGGGGATaGACCGCTCAGGAGGATATAGGTGATGACACCGAT +
Preference number: 6 (lower is better)
Translates to: ERLLLGLAQERG*TAQEDIGDDTD
Trigger: ATCGGTGTCATCACCTATATCCTCCTGAGCGGTGCATCCCCGTTCCTGGGCGAGACCAAGCAGGAGACGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS CCA 72 bp GAACAGCCTCAGACTGGAGGCGGCGAAGGAGCTGAATaGCTAAATGCCGTGTGGGGACCTCAGAGAGGACAG +
Preference number: 6 (lower is better)
Translates to: EQPQTGGGEGAE*LNAVWGPQRGQ
Trigger: CTGTCCTCTCTGAGGTCCCCACACGGCATTTAGCCATTCAGCTCCTTCGCCGCCTCCAGTCTGAGGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595279.1
CDS CAA 90 bp TCCGGGGTGCCGAAGATGTTCTTGAACTCGTTCCCCGCCTCGATCTaGTGCGCGATGCCGAAGTCGATGAGCTTGATTCGTGGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: SGVPKMFLNSFPASI*CAMPKSMSLIRGLG
Trigger: GCCCAACCCACGAATCAAGCTCATCGACTTCGGCATCGCGCACAAGATCGAGGCGGGGAACGAGTTCAAGAACATCTTCGGCACCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS CAA 72 bp GCCTCGATCTTGTGCGCGATGCCGAAGTCGATGAGCTaGATTCGTGGGTTGGGCACGTTCTTGTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASILCAMPKSMS*IRGLGTFLSSS
Trigger: GCTGCTGGACAAGAACGTGCCCAACCCACGAATCAAGCTCATCGACTTCGGCATCGCGCACAAGATCGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS TCA 72 bp GCTGAAGTACTCCTCGTCGAAGTCGTAGTTCACGGCTaGGATGTTGGTGAGCGTCTCCTGCTTGGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: AEVLLVEVVVHG*DVGERLLLGLA
Trigger: GGCGAGACCAAGCAGGAGACGCTCACCAACATCTCAGCCGTGAACTACGACTTCGACGAGGAGTACTTCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000594894.1
ENST00000595279.1
CDS GCA 72 bp ACAGGCAGAAGTCTCCTTGGAGACTCGAAGTATCTGTaGAGACGCAGAGCCCGAAAGCCCCCAGTGCTCAGT +
Preference number: 6 (lower is better)
Translates to: TGRSLLGDSKYL*RRRARKPPVLS
Trigger: ACTGAGCACTGGGGGCTTTCGGGCTCTGCGTCTGCACAGATACTTCGAGTCTCCAAGGAGACTTCTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595279.1
CDS CAA 90 bp TCGTTCCCCGCCTCGATCTTGTGCGCGATGCCGAAGTCGATGAGCTaGATTCGTGGGTTGGGCACGTTCTTGTCCAGCAGCATGATGTTT +
Preference number: 6 (lower is better)
Translates to: SFPASILCAMPKSMS*IRGLGTFLSSSMMF
Trigger: AAACATCATGCTGCTGGACAAGAACGTGCCCAACCCACGAATCAAGCTCATCGACTTCGGCATCGCGCACAAGATCGAGGCGGGGAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS CCA 72 bp CGCCGGATCGCCTTAATCCAGGAATGTTCCAGGCTCTaGGCAATGGTCATTCTCCGCTTGGGATCTTTGACG +
Preference number: 6 (lower is better)
Translates to: RRIALIQECSRL*AMVILRLGSLT
Trigger: CGTCAAAGATCCCAAGCGGAGAATGACCATTGCCCAGAGCCTGGAACATTCCTGGATTAAGGCGATCCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301264.7
ENST00000545797.7
ENST00000595279.1
CDS GCA 72 bp AAGATGTTCTTGAACTCGTTCCCCGCCTCGATCTTGTaGGCGATGCCGAAGTCGATGAGCTTGATTCGTGGG +
Preference number: 6 (lower is better)
Translates to: KMFLNSFPASIL*AMPKSMSLIRG
Trigger: CCCACGAATCAAGCTCATCGACTTCGGCATCGCGCACAAGATCGAGGCGGGGAACGAGTTCAAGAACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS CCA 72 bp CTTGTGCGCGATGCCGAAGTCGATGAGCTTGATTCGTaGGTTGGGCACGTTCTTGTCCAGCAGCATGATGTT +
Preference number: 6 (lower is better)
Translates to: LVRDAEVDELDS*VGHVLVQQHDV
Trigger: AACATCATGCTGCTGGACAAGAACGTGCCCAACCCACGAATCAAGCTCATCGACTTCGGCATCGCGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS CAA 72 bp CCGAAGATGTTCTTGAACTCGTTCCCCGCCTCGATCTaGTGCGCGATGCCGAAGTCGATGAGCTTGATTCGT +
Preference number: 6 (lower is better)
Translates to: PKMFLNSFPASI*CAMPKSMSLIR
Trigger: ACGAATCAAGCTCATCGACTTCGGCATCGCGCACAAGATCGAGGCGGGGAACGAGTTCAAGAACATCTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301264.7
ENST00000545797.7
CDS TCA 72 bp ACTAAACGTGGACTCAGACGCCTTCTGCAAAACACCTaGCCCGTGAGCACAAGTCAGGGTCAAGGTCATGAA +
Preference number: 6 (lower is better)
Translates to: TKRGLRRLLQNT*PVSTSQGQGHE
Trigger: TTCATGACCTTGACCCTGACTTGTGCTCACGGGTCAGGTGTTTTGCAGAAGGCGTCTGAGTCCACGTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595279.1
CDS CCA 72 bp TCCCCACTTACCTTAATCCAGGAATGTTCCAGGCTCTaGGCAATGGTCATTCTCCGCTTGGGATCTTTGACG +
Preference number: 6 (lower is better)
Translates to: SPLTLIQECSRL*AMVILRLGSLT
Trigger: CGTCAAAGATCCCAAGCGGAGAATGACCATTGCCCAGAGCCTGGAACATTCCTGGATTAAGGTAAGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594894.1