RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAPK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000035664

Ensembl transcript IDs: ENST00000261891.7, ENST00000457488.5, ENST00000558064.1, ENST00000558069.5, ENST00000558076.1, ENST00000558482.5, ENST00000559007.5, ENST00000559306.1, ENST00000559731.5, ENST00000559897.1, ENST00000561162.5, ENST00000612884.4

Found 915 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACAGAAGGGAGCCCCGCTGGGCCCAGACCTCCCTGGCGGCCACTaGAGGTCAGGCCAGTTAGGAGGTGCTGCTCCTCCTCCGTGGGTG +
Preference number: 1 (lower is better)
Translates to: AQKGAPLGPDLPGGH*RSGQLGGAAPPPWV
Trigger: CACCCACGGAGGAGGAGCAGCACCTCCTAACTGGCCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCTGGGCCCAGACCTCCCTGGCGGCCA +
Preference number: 1 (lower is better)
Translates to: CSGRPGAGAELGPKV*TEGSPAGPRPPWRP
Trigger: TGGCCGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR GCA 90 bp CCCAGACCTCCCTGGCGGCCACTGCAGGTCAGGCCAGTTAGGAGGTaGTGCTCCTCCTCCGTGGGTGGAGGGCTTTCCTCCTGGCGATGT +
Preference number: 1 (lower is better)
Translates to: PRPPWRPLQVRPVRR*CSSSVGGGLSSWRC
Trigger: ACATCGCCAGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGCACCTCCTAACTGGCCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp CCAAAAGTCTGCACAGAAGGGAGCCCCGCTGGGCCCAGACCTCCCTaGCGGCCACTGCAGGTCAGGCCAGTTAGGAGGTGCTGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: PKVCTEGSPAGPRPP*RPLQVRPVRRCCSS
Trigger: GGAGGAGCAGCACCTCCTAACTGGCCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCTGTGCAGACTTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp AGACCTCCCTGGCGGCCACTGCAGGTCAGGCCAGTTAGGAGGTGCTaGTCCTCCTCCGTGGGTGGAGGGCTTTCCTCCTGGCGATGTCCT +
Preference number: 1 (lower is better)
Translates to: RPPWRPLQVRPVRRC*SSSVGGGLSSWRCP
Trigger: AGGACATCGCCAGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGCACCTCCTAACTGGCCTGACCTGCAGTGGCCGCCAGGGAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp GCTGCATCCCACAGGCCCCCGGGCTCCCCCAGCATCAGGTTCCAATaGCATGGAAGGACGGGACTTCAGCTGGCCAGGACACAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: AASHRPPGSPSIRFQ*HGRTGLQLARTQRK
Trigger: CTTCCTCTGTGTCCTGGCCAGCTGAAGTCCCGTCCTTCCATGGCATTGGAACCTGATGCTGGGGGAGCCCGGGGGCCTGTGGGATGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp GGCCCACCAGGAAAGGATGGGAGATCCTCCAGGAGTTCATGCTGCTaGATCAGTGGTCCCCTCCCGGCACCACCCAGAGGTCCCCAGAAC +
Preference number: 1 (lower is better)
Translates to: GPPGKDGRSSRSSCC*ISGPLPAPPRGPQN
Trigger: GTTCTGGGGACCTCTGGGTGGTGCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCCTTTCCTGGTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp TCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTaGGTCCAAAAGTCTGCACAGAAGGGAGCCCCGCTGGGCCCAGAC +
Preference number: 1 (lower is better)
Translates to: SLLQSAQDARVLVLS*VQKSAQKGAPLGPD
Trigger: GTCTGGGCCCAGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR CCA 90 bp GCACATGGGGCTTGTGGGAGGCTTGAGGCTCTGCCTCCTCCTAAGTaGGAGGGACAGCTGCAGAAAGGCTGTGAGCCTGAAGGCTGCCCC +
Preference number: 1 (lower is better)
Translates to: AHGACGRLEALPPPK*EGQLQKGCEPEGCP
Trigger: GGGGCAGCCTTCAGGCTCACAGCCTTTCTGCAGCTGTCCCTCCCACTTAGGAGGAGGCAGAGCCTCAAGCCTCCCACAAGCCCCATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp GGTCCCCTCCCGGCACCACCCAGAGGTCCCCAGAACACACTCCTCTaGAGATCACACTTCAGCCTTCAGGGAAGAGGAGGACTGGGCCAG +
Preference number: 1 (lower is better)
Translates to: GPLPAPPRGPQNTLL*RSHFSLQGRGGLGQ
Trigger: CTGGCCCAGTCCTCCTCTTCCCTGAAGGCTGAAGTGTGATCTTCAGAGGAGTGTGTTCTGGGGACCTCTGGGTGGTGCCGGGAGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp ATCCCACAGGCCCCCGGGCTCCCCCAGCATCAGGTTCCAATGCCATaGAAGGACGGGACTTCAGCTGGCCAGGACACAGAGGAAGGTCAT +
Preference number: 1 (lower is better)
Translates to: IPQAPGLPQHQVPMP*KDGTSAGQDTEEGH
Trigger: ATGACCTTCCTCTGTGTCCTGGCCAGCTGAAGTCCCGTCCTTCCATGGCATTGGAACCTGATGCTGGGGGAGCCCGGGGGCCTGTGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp ACTGGACACCTTCCTGTTAGGGAAGCAAGGAGGAGGCAGGCCCACTaGAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTGAGATTCTGC +
Preference number: 1 (lower is better)
Translates to: TGHLPVREARRRQAH*RPARTVQEDLLRFC
Trigger: GCAGAATCTCAGAAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCTTCCCTAACAGGAAGGTGTCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR GCA 90 bp TCAGGACGCTTCCCCCGATGCTGTCAGACCCTGACGGCAGGCCCCTaGAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: SGRFPRCCQTLTAGP*SAMCFSPSMNTSCS
Trigger: GCTGCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGTCAGGGTCTGACAGCATCGGGGGAAGCGTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp CAGGAGGATCATGAGACGCCAGGAATGGGGCTGTGCTGGGCAACCTaGGTTGATTCACCTGGACCACGGGACTACAAGCCAGGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: QEDHETPGMGLCWAT*VDSPGPRDYKPGRW
Trigger: CCACCTCCCTGGCTTGTAGTCCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAGCACAGCCCCATTCCTGGCGTCTCATGATCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp GGTCCAGGGCAGGAGGATCATGAGACGCCAGGAATGGGGCTGTGCTaGGCAACCTGGGTTGATTCACCTGGACCACGGGACTACAAGCCA +
Preference number: 1 (lower is better)
Translates to: GPGQEDHETPGMGLC*ATWVDSPGPRDYKP
Trigger: TGGCTTGTAGTCCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAGCACAGCCCCATTCCTGGCGTCTCATGATCCTCCTGCCCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp AGCTTGGGAGTGGAGGAGGGCGGTCACTGGTGGGGACGGCGTCCCTaGGAAGGCCTCTCTTCTCTGCAACCCTCTTACCCTTTCTCAATC +
Preference number: 1 (lower is better)
Translates to: SLGVEEGGHWWGRRP*EGLSSLQPSYPFSI
Trigger: GATTGAGAAAGGGTAAGAGGGTTGCAGAGAAGAGAGGCCTTCCCAGGGACGCCGTCCCCACCAGTGACCGCCCTCCTCCACTCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp GAAGAGGGCATGCATTTACCCACCAGGTCCTCATCCGGCCTCAGGTaGACCTTCTTCATCAGCGAGCGGGTGAGGTGGTTGCACAGGGAC +
Preference number: 1 (lower is better)
Translates to: EEGMHLPTRSSSGLR*TFFISERVRWLHRD
Trigger: GTCCCTGTGCAACCACCTCACCCGCTCGCTGATGAAGAAGGTGCACCTGAGGCCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp AGAGGTCCAGGGCAGGAGGATCATGAGACGCCAGGAATGGGGCTGTaGTGGGCAACCTGGGTTGATTCACCTGGACCACGGGACTACAAG +
Preference number: 1 (lower is better)
Translates to: RGPGQEDHETPGMGL*WATWVDSPGPRDYK
Trigger: CTTGTAGTCCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAGCACAGCCCCATTCCTGGCGTCTCATGATCCTCCTGCCCTGGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp TCATCCGGCCTCAGGTGCACCTTCTTCATCAGCGAGCGGGTGAGGTaGTTGCACAGGGACACGATGCTGAAGGAAAGCTTCCACCGCCTG +
Preference number: 1 (lower is better)
Translates to: SSGLRCTFFISERVR*LHRDTMLKESFHRL
Trigger: CAGGCGGTGGAAGCTTTCCTTCAGCATCGTGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGAAGAAGGTGCACCTGAGGCCGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp AGGAAAGGATGGGAGATCCTCCAGGAGTTCATGCTGCTGCATCAGTaGTCCCCTCCCGGCACCACCCAGAGGTCCCCAGAACACACTCCT +
Preference number: 1 (lower is better)
Translates to: RKGWEILQEFMLLHQ*SPPGTTQRSPEHTP
Trigger: AGGAGTGTGTTCTGGGGACCTCTGGGTGGTGCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp GGGGGCCCATGGGGGAGACTCCAGCTCTTTCTGCCATTATTCCTCTaGTCCATCCCTTCACTGCCAGGCTCCCACAGCTGCAGAATCATC +
Preference number: 1 (lower is better)
Translates to: GGPWGRLQLFLPLFL*SIPSLPGSHSCRII
Trigger: GATGATTCTGCAGCTGTGGGAGCCTGGCAGTGAAGGGATGGAGCAGAGGAATAATGGCAGAAAGAGCTGGAGTCTCCCCCATGGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp GTTAGGAGGTGCTGCTCCTCCTCCGTGGGTGGAGGGCTTTCCTCCTaGCGATGTCCTCCTCAGTGTCACTCTCACAGTTCCTCTGGAGAA +
Preference number: 1 (lower is better)
Translates to: VRRCCSSSVGGGLSS*RCPPQCHSHSSSGE
Trigger: TTCTCCAGAGGAACTGTGAGAGTGACACTGAGGAGGACATCGCCAGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGCACCTCCTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp CTGAGCTGTTCACGGGGCATTCCCTCCCCAGCACCTGGAACCCGCTaGCTTCTCATGACTTTCGGGATAAGGGCAGAGCTCTTCCACATG +
Preference number: 1 (lower is better)
Translates to: LSCSRGIPSPAPGTR*LLMTFGIRAELFHM
Trigger: CATGTGGAAGAGCTCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAGGGAATGCCCCGTGAACAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp CACTTCCTGTCTGAGCTGTTCACGGGGCATTCCCTCCCCAGCACCTaGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGCT +
Preference number: 1 (lower is better)
Translates to: HFLSELFTGHSLPST*NPLASHDFRDKGRA
Trigger: AGCTCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAGGGAATGCCCCGTGAACAGCTCAGACAGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp TTCAGGGAAGAGGAGGACTGGGCCAGCAGAACTGGCTGGAAACAGTaGACACCCACCTGCCTTGTGAGGGGAAAGGGAACTCACCCATCC +
Preference number: 1 (lower is better)
Translates to: FREEEDWASRTGWKQ*TPTCLVRGKGTHPS
Trigger: GGATGGGTGAGTTCCCTTTCCCCTCACAAGGCAGGTGGGTGTTCACTGTTTCCAGCCAGTTCTGCTGGCCCAGTCCTCCTCTTCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp AAAGGGAACTCACCCATCCCTGAGCTCCAGGCTACCCCAGAATTCTaGCCAAGAAGAGGGCATGCATTTACCCACCAGGTCCTCATCCGG +
Preference number: 1 (lower is better)
Translates to: KGNSPIPELQATPEF*PRRGHAFTHQVLIR
Trigger: CCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGGCAGAATTCTGGGGTAGCCTGGAGCTCAGGGATGGGTGAGTTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 90 bp ATGAATCCAGGTGTGAGCTGCCCCCACAAGCAGGGAGTAAACTTCTaGAGCCTGGCGCAGCCAGGGGAAGCAGAAAGAGCAACAGACTTG +
Preference number: 1 (lower is better)
Translates to: MNPGVSCPHKQGVNF*SLAQPGEAERATDL
Trigger: CAAGTCTGTTGCTCTTTCTGCTTCCCCTGGCTGCGCCAGGCTCCAGAAGTTTACTCCCTGCTTGTGGGGGCAGCTCACACCTGGATTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp ATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTTGGCTTAGCTaGCCTCCGTTCCAGTGTCACTGCTTCAGGACGCTTCCCCCGATG +
Preference number: 1 (lower is better)
Translates to: MMALLGNFSLPGWLS*PPFQCHCFRTLPPM
Trigger: CATCGGGGGAAGCGTCCTGAAGCAGTGACACTGGAACGGAGGTCAGCTAAGCCAACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp GGGACAGGCAGCTGCCTTCCCCAAGGGCCAGCTTGCCAGCTTCCTTaGGAATTGTTATTCAGGGCGATGTCATACACTCACTTTCCCCTC +
Preference number: 1 (lower is better)
Translates to: GTGSCLPQGPACQLP*ELLFRAMSYTHFPL
Trigger: GAGGGGAAAGTGAGTGTATGACATCGCCCTGAATAACAATTCTCAAGGAAGCTGGCAAGCTGGCCCTTGGGGAAGGCAGCTGCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp GATTCTGTGGAGGGGCTGGAAGGCTATACTACAGACACACACCCCTaGAGGATAATTCTAGCTGGAGGCCGCAGCAGGGTGGATGAGAAC +
Preference number: 1 (lower is better)
Translates to: DSVEGLEGYTTDTHP*RIILAGGRSRVDEN
Trigger: GTTCTCATCCACCCTGCTGCGGCCTCCAGCTAGAATTATCCTGCAGGGGTGTGTGTCTGTAGTATAGCCTTCCAGCCCCTCCACAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp GGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGTTCTaGACCCCCTCAGCCTGTGAAGAAGGCTGCCTTAGTCTGACCTTC +
Preference number: 1 (lower is better)
Translates to: GRTLSLWCNFWPGWF*TPSACEEGCLSLTF
Trigger: GAAGGTCAGACTAAGGCAGCCTTCTTCACAGGCTGAGGGGGTTCAGAACCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR TCA 90 bp ACACCCCTGCAGGATAATTCTAGCTGGAGGCCGCAGCAGGGTGGATaGGAACATGCTTCTGCAAACCTCTTGGGATGCATCACTGACTGG +
Preference number: 1 (lower is better)
Translates to: TPLQDNSSWRPQQGG*EHASANLLGCITDW
Trigger: CCAGTCAGTGATGCATCCCAAGAGGTTTGCAGAAGCATGTTCTCATCCACCCTGCTGCGGCCTCCAGCTAGAATTATCCTGCAGGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp GAGCCAGAGCACAATCAGTGTTTGTTCAACGGGACTGGACCCTTTTaGAACGTGAACATGCCCACTGCTGGGTCAGGAATTTCACGGACC +
Preference number: 1 (lower is better)
Translates to: EPEHNQCLFNGTGPF*NVNMPTAGSGISRT
Trigger: GGTCCGTGAAATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTTGAACAAACACTGATTGTGCTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp CTTGCCCTGTGTTGCCCCATCAGTGGCTTCCTCTCCTTAGAAACCTaGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACAT +
Preference number: 1 (lower is better)
Translates to: LALCCPISGFLSLET*LCEGQGLLTRPKGH
Trigger: ATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGTTTCTAAGGAGAGGAAGCCACTGATGGGGCAACACAGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp CCACAAGCTTCTAGCTCAGCACTAGGCTCATATGCCATGCTCTGTTaGCATGAGTTGGTTGACTGTCCCCTCCCCCAGAGAAAGGGAGAT +
Preference number: 1 (lower is better)
Translates to: PQASSSALGSYAMLC*HELVDCPLPQRKGD
Trigger: ATCTCCCTTTCTCTGGGGGAGGGGACAGTCAACCAACTCATGTCAACAGAGCATGGCATATGAGCCTAGTGCTGAGCTAGAAGCTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp TCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATaGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGT +
Preference number: 1 (lower is better)
Translates to: SLTPKVHFPQSPCSQ*GGLCLSGVIFGQAG
Trigger: ACCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR CCA 90 bp TCCTCACATTCTCAACCTTCCACACCGCCTCTCATCACAGAGCTCTaGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTTGGCT +
Preference number: 1 (lower is better)
Translates to: SSHSQPSTPPLITEL*YDGSVGKLLSPWLA
Trigger: AGCCAACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGAGAGGCGGTGTGGAAGGTTGAGAATGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp ACATTCTCAACCTTCCACACCGCCTCTCATCACAGAGCTCTGGTATaGTGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTTGGCTTAGCT +
Preference number: 1 (lower is better)
Translates to: TFSTFHTASHHRALV*WLCWETSLSLVGLA
Trigger: AGCTAAGCCAACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGAGAGGCGGTGTGGAAGGTTGAGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp TGTCATACACTCACTTTCCCCTCCCAAACAGCCCAGGATGGTGTTTaGACAGAGCACAGAAGCCGACCTTTTATTTGCAGTCTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: CHTLTFPSQTAQDGV*TEHRSRPFICSLGW
Trigger: CCAGCCCAGACTGCAAATAAAAGGTCGGCTTCTGTGCTCTGTTCAAACACCATCCTGGGCTGTTTGGGAGGGGAAAGTGAGTGTATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp AAGTCAGGAGGCATCTCCCAGATGATGGTATCATATTCTTACTGTTaGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTT +
Preference number: 1 (lower is better)
Translates to: KSGGISQMMVSYSYC*PGQKAGAPGEDSTV
Trigger: AACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAACAGTAAGAATATGATACCATCATCTGGGAGATGCCTCCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp TTCAAGGCCCAATGGCCTAGGTACATAAGAAAAGGAACCTCCTGTTaGGGACCTTCTGGCCTTTATTCTCGACACAGAGTTGGGGCCGTT +
Preference number: 1 (lower is better)
Translates to: FKAQWPRYIRKGTSC*GPSGLYSRHRVGAV
Trigger: AACGGCCCCAACTCTGTGTCGAGAATAAAGGCCAGAAGGTCCTCAACAGGAGGTTCCTTTTCTTATGTACCTAGGCCATTGGGCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp AGCACAATCAGTGTTTGTTCAACGGGACTGGACCCTTTTGCAACGTaGACATGCCCACTGCTGGGTCAGGAATTTCACGGACCAAGGAAA +
Preference number: 1 (lower is better)
Translates to: STISVCSTGLDPFAT*TCPLLGQEFHGPRK
Trigger: TTTCCTTGGTCCGTGAAATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTTGAACAAACACTGATTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp AGGGCGATGTCATACACTCACTTTCCCCTCCCAAACAGCCCAGGATaGTGTTTGAACAGAGCACAGAAGCCGACCTTTTATTTGCAGTCT +
Preference number: 1 (lower is better)
Translates to: RAMSYTHFPLPNSPG*CLNRAQKPTFYLQS
Trigger: AGACTGCAAATAAAAGGTCGGCTTCTGTGCTCTGTTCAAACACCATCCTGGGCTGTTTGGGAGGGGAAAGTGAGTGTATGACATCGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp GCTGAAGAATTCCTCATCAAAGTCGTAACTCACTGCTGTGATATTTaGCAGTGTTTCCTGCTTCGTGTCTCCCAGGAAAGGGGATGCTCC +
Preference number: 1 (lower is better)
Translates to: AEEFLIKVVTHCCDI*QCFLLRVSQERGCS
Trigger: GGAGCATCCCCTTTCCTGGGAGACACGAAGCAGGAAACACTGGCAAATATCACAGCAGTGAGTTACGACTTTGATGAGGAATTCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp CTCGCTCGTCTGGCTGAAGAATTCCTCATCAAAGTCGTAACTCACTaGTGTGATATTTGCCAGTGTTTCCTGCTTCGTGTCTCCCAGGAA +
Preference number: 1 (lower is better)
Translates to: LARLAEEFLIKVVTH*CDICQCFLLRVSQE
Trigger: TTCCTGGGAGACACGAAGCAGGAAACACTGGCAAATATCACAGCAGTGAGTTACGACTTTGATGAGGAATTCTTCAGCCAGACGAGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 90 bp GGCCTGCATTCTATTTTGACCTTCACTAAAAAGCTTGCCCTGTGTTaGCCCATCAGTGGCTTCCTCTCCTTAGAAACCTGGCTGTGTGAA +
Preference number: 1 (lower is better)
Translates to: GLHSILTFTKKLALC*PISGFLSLETWLCE
Trigger: TTCACACAGCCAGGTTTCTAAGGAGAGGAAGCCACTGATGGGGCAACACAGGGCAAGCTTTTTAGTGAAGGTCAAAATAGAATGCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp GAGTATAAAGTACTGTCTGTCAGTTCCTACATGGCAAACCAGAGCTaGGGCAGCCACCCCGAGGCCATAATGTCTTTTCATCCAAGTCAT +
Preference number: 1 (lower is better)
Translates to: EYKVLSVSSYMANQS*GSHPEAIMSFHPSH
Trigger: ATGACTTGGATGAAAAGACATTATGGCCTCGGGGTGGCTGCCTCAGCTCTGGTTTGCCATGTAGGAACTGACAGACAGTACTTTATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 90 bp GTGTTGCCCCATCAGTGGCTTCCTCTCCTTAGAAACCTGGCTGTGTaGAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATATT +
Preference number: 1 (lower is better)
Translates to: VLPHQWLPLLRNLAV*RSRSVNTAKGTFNI
Trigger: AATATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGTTTCTAAGGAGAGGAAGCCACTGATGGGGCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp TACAGTGAACAAGCCAGTGGAAGGAGGCAGAAACATTCCTTTCCTTaGTTGGCCTGGTCTCACATTTCTGAGTTAGGTCTTGACATGGAT +
Preference number: 1 (lower is better)
Translates to: YSEQASGRRQKHSFP*LAWSHISELGLDMD
Trigger: ATCCATGTCAAGACCTAACTCAGAAATGTGAGACCAGGCCAAGCAAGGAAAGGAATGTTTCTGCCTCCTTCCACTGGCTTGTTCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp CTTTTGGATCACACTGATAGTGCAAATTCAGAAAGCAAACCTGCATaGGTACCACCGGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTT +
Preference number: 1 (lower is better)
Translates to: LLDHTDSANSESKPA*VPPAWDSCSQGRIF
Trigger: AAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCCGGTGGTACTCATGCAGGTTTGCTTTCTGAATTTGCACTATCAGTGTGATCCAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp TGTTGGGAGTGGTGGGGACATGTGAGGATGGAATGGGAATCCAGATaGGATGAAGGAATTATTGCTGATTTTGTCAAGTGTGATAATGGC +
Preference number: 1 (lower is better)
Translates to: CWEWWGHVRMEWESR*DEGIIADFVKCDNG
Trigger: GCCATTATCACACTTGACAAAATCAGCAATAATTCCTTCATCTCATCTGGATTCCCATTCCATCCTCACATGTCCCCACCACTCCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 90 bp GAAGCAGAAAGAGCAACAGACTTGTCATTAGAAGGTCTCTACTTTTaGCATAATGATGTGACCTTGGGAAAATCCCATCCTCTCCCTGTT +
Preference number: 1 (lower is better)
Translates to: EAERATDLSLEGLYF*HNDVTLGKSHPLPV
Trigger: AACAGGGAGAGGATGGGATTTTCCCAAGGTCACATCATTATGGCAAAAGTAGAGACCTTCTAATGACAAGTCTGTTGCTCTTTCTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp CAGCCTCAGACTGTTGGACATTACACTCTCTGCTTGATGTTCTTTTaGATCACACTGATAGTGCAAATTCAGAAAGCAAACCTGCATGAG +
Preference number: 1 (lower is better)
Translates to: QPQTVGHYTLCLMFF*ITLIVQIQKANLHE
Trigger: CTCATGCAGGTTTGCTTTCTGAATTTGCACTATCAGTGTGATCCAAAAGAACATCAAGCAGAGAGTGTAATGTCCAACAGTCTGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp ATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATaGAGTTGCTTACTTTACCTCTGGGACCTGGACTTTAATATTAAG +
Preference number: 1 (lower is better)
Translates to: IICRCMHSTYTWQNT*SCLLYLWDLDFNIK
Trigger: CTTAATATTAAAGTCCAGGTCCCAGAGGTAAAGTAAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp TATCTCTCTGTGATTCTTGGTCAATGTTCAAATCCTTCGCTGGACTaGGCACTCCGTGAGACAGGAATCAGGCCTATTTTTACTAAACAT +
Preference number: 1 (lower is better)
Translates to: YLSVILGQCSNPSLD*ALRETGIRPIFTKH
Trigger: ATGTTTAGTAAAAATAGGCCTGATTCCTGTCTCACGGAGTGCTCAGTCCAGCGAAGGATTTGAACATTGACCAAGAATCACAGAGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 90 bp AGAAGCTCTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTaGGAAACAGTTACAGTGACTGGACATGAGCATAGAGAGGACGAT +
Preference number: 1 (lower is better)
Translates to: RSSLYRKRSVYDTSK*ETVTVTGHEHREDD
Trigger: ATCGTCCTCTCTATGCTCATGTCCAGTCACTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAGAGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 90 bp AAGTGCCTTTCTAAAGACCCCATCTCCAAATACAGTGATATTCTGTaGTACCAAGGGTTAAGACTTCAACATAGAAATTTTAGGGAGACA +
Preference number: 1 (lower is better)
Translates to: KCLSKDPISKYSDIL*YQGLRLQHRNFRET
Trigger: TGTCTCCCTAAAATTTCTATGTTGAAGTCTTAACCCTTGGTACCACAGAATATCACTGTATTTGGAGATGGGGTCTTTAGAAAGGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR GCA 90 bp CTGAGTTCTTTTAAGGACCAAGTGAGGTCATTTGTCAGACATGAGTaGTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCAATATTATT +
Preference number: 1 (lower is better)
Translates to: LSSFKDQVRSFVRHE*LVSEKSMQTKGNII
Trigger: AATAATATTGCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGACCTCACTTGGTCCTTAAAAGAACTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp GCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCGGGCCCAGACCTCCCTaGCGGCCACTGCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: AKCSGRPGAGAELGPKVCGPRPP*RPLQVR
Trigger: CCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCC...GCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CCA 90 bp TGGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTAGAGAGACTGGAGGATGGGAGAAGGGAGCCCCGCTaGGCCCAGACCTCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: WSVAAGSPELSLERLEDGRREPR*AQTSLA
Trigger: CGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCT...CCCATCCTCCAGTCTCTCTAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CCA 90 bp AGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTGGCTCCCAGGGTCTCCTaGCTTGCCTGCAAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: RRRQAHCRPARTVQEDLLAPRVS*LACKLF
Trigger: GAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGC...CAGAAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTAGGTGTTGGTCAGCCTaGCGTCCTGGCTTCCATGGT +
Preference number: 2 (lower is better)
Translates to: SKEEAGPLQACADGSGGPRCWSA*RPGFHG
Trigger: ACCATGGAAGCCAGGACGTCAGGCTGACCAACACCT...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR GCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTGGGCCAGCAATGGGCTaGTTCAGAAGGTCTGAGGTG +
Preference number: 2 (lower is better)
Translates to: SKEEAGPLQACADGSGGPGPAMG*FRRSEV
Trigger: CACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCC...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CCA 90 bp CTGGGCTTAAGCAATGCTGTCACCTCAGCCCCTGGAGTAGCTGGGATGCCAGGTAGAAGGGAGCCCCGCTaGGCCCAGACCTCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: LGLSNAVTSAPGVAGMPGRREPR*AQTSLA
Trigger: CGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCT...ACCTGGCATCCCAGCTACTCCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp ACCTTCCTGTTAGGGAAGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGATCATCAGCGAGCGGGTaGGGTGGTTGCACAGGGACA +
Preference number: 2 (lower is better)
Translates to: TFLLGKQGGGRPTAGLRGSSASG*GGCTGT
Trigger: TGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGA...TCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCTTCCCTAACAGGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR GCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAAGCAGGTCCTGTGGCTaGATCCCACAGGCCCCCGGG +
Preference number: 2 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSSRSCG*IPQAPG
Trigger: CCCGGGGGCCTGTGGGATGCAGCCACAGGACCTGCT...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCCCGAGATCATGCCACTaGACTCCAGCCTGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: PVKARALSHPLLSCPGPLPRSCH*TPAWAA
Trigger: TGCCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGG...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTACGTCCTGGCTTCCATaGTTCTGGGAGGTCACAGGA +
Preference number: 2 (lower is better)
Translates to: SKEEAGPLQACADGSGGPTSWLP*FWEVTG
Trigger: TCCTGTGACCTCCCAGAACCATGGAAGCCAGGACGT...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTGCCAGACCAACTGCTTaGAGGAAGGAAAGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SKEEAGPLQACADGSGGPARPTA*RKESSR
Trigger: CCTGCTGCTTTCCTTCCTCCAAGCAGTTGGTCTGGC...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CAA 90 bp TCCGGCCTCAGGTGCACCTTCTTCATCAGCGAGCGGGTGAGGTGGTaGCACAGGGACACGATGCTGAAGGAAAGCTTCCACCGCCTGCGG +
Preference number: 2 (lower is better)
Translates to: SGLRCTFFISERVRW*HRDTMLKESFHRLR
Trigger: CCGCAGGCGGTGGAAGCTTTCCTTCAGCATCGTGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGAAGAAGGTGCACCTGAGGCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR TCA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCCCCGGGTGCTGGTGCTaGGCTGGGTCCAAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPPGCWC*AGSKSL
Trigger: CAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGG...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp ACCTTCCTGTTAGGGAAGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACTGCTTCAGAAGGTCTaGGGTGTTGGTCAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: TFLLGKQGGGRPTAGLRGLLQKV*GVGQPD
Trigger: GTCAGGCTGACCAACACCTCAGACCTTCTGAAGCAG...TCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCTTCCCTAACAGGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR GCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCGGACGCTTCCCCCGATaGTGTCAGACCCTGACGGCA +
Preference number: 2 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASGRFPR*CQTLTA
Trigger: TGCCGTCAGGGTCTGACAGCATCGGGGGAAGCGTCC...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCATGGGGACGGCGTCCCTaGGAAGGCCTCTCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSWGRRP*EGLSSL
Trigger: CAGAGAAGAGAGGCCTTCCCAGGGACGCCGTCCCCA...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp AGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTaGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SSQGLLACLQALLNS*GPSLLQSAQDARVL
Trigger: CAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCGCCCAGGATGGTGTTTaGACAGAGCACAGAAGCCGA +
Preference number: 2 (lower is better)
Translates to: PVKARALSHPLLSCPGPLAQDGV*TEHRSR
Trigger: TCGGCTTCTGTGCTCTGTTCAAACACCATCCTGGGC...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp GCGCACCATGGCTTGCTGGTTGTCCACCGGCGTGATCCAGGGGTGTCTGAGAGCACCCCATCCAGGATCTaGTTAATGAAGCTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: AHHGLLVVHRRDPGVSESTPSRI*LMKLVA
Trigger: GGCCACCAGCTTCATTAAGCAGATCCTGGATGGGGT...GCTCTCAGACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR GCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGACCGTTCCAGTGTCACTaGTTCAGGACGCTTCCCCCG +
Preference number: 2 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRPFQCH*FRTLPP
Trigger: CGGGGGAAGCGTCCTGAAGCAGTGACACTGGAACGG...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGGGCCCAGACCTCCCTaGCGGCCACTGCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLGPRPP*RPLQVR
Trigger: CCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCC...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR CAA 90 bp GGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTaGCCAGCCATCCAGGGCCACCCAGCCTCAGACTGTTGGACATTA +
Preference number: 2 (lower is better)
Translates to: GPDRRQVLRERIVLF*PAIQGHPASDCWTL
Trigger: TAATGTCCAACAGTCTGAGGCTGGGTGGCCCTGGATGGCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp GGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCCAAAGCGCATGGCCAGGCTGGTTCTaGACCCCCTCAGCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: GLQLLSSSNSPASDCQSAWPGWF*TPSACE
Trigger: TTCACAGGCTGAGGGGGTTCAGAACCAGCCTGGCCA...TGCGCTTTGGCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp GCCCAGGCTGGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCCTGCTTCAGAAGGTCTaGGGTGTTGGTCAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: AQAGLQLLSSSNSPASDCLLQKV*GVGQPD
Trigger: GTCAGGCTGACCAACACCTCAGACCTTCTGAAGCAG...GCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAGCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCCGCACCATGGCTTGCTaGTTGTCCACCGGCGTGATC +
Preference number: 2 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCRTMAC*LSTGVI
Trigger: GATCACGCCGGTGGACAACCAGCAAGCCATGGTGCG...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCACAGGGAGTAAACTTCTaGAGCCTGGCGCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPQGVNF*SLAQPG
Trigger: CCCTGGCTGCGCCAGGCTCCAGAAGTTTACTCCCTG...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp AGCTTCCACCGCCTGCGGACATACTGCTTCCTGAAGTTCTCCAGATaGACCACAGACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACC +
Preference number: 2 (lower is better)
Translates to: SFHRLRTYCFLKFSR*TTDSLRTMACWLST
Trigger: GGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAACTTCAGGAAGCAGTATGTCCGCAGGCGGTGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR TCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCTCCCACCCCAGACTCTaGGGATGGCAGACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCSHPRL*GWQTEE
Trigger: TTCCTCTGTCTGCCATCCTCAGAGTCTGGGGTGGGA...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp GCCCAGGCTGGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCTTCAGGAGGACCTTCTaGGATTCTGCCCACTCAGCA +
Preference number: 2 (lower is better)
Translates to: AQAGLQLLSSSNSPASDCFRRTF*DSAHSA
Trigger: TGCTGAGTGGGCAGAATCTCAGAAGGTCCTCCTGAA...GCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAGCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp TTAGTTTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCAGCAGCGGCCCCTCTaGAGGCCCACCAGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: LVCRWLFPLPLLGLHVVFQQRPL*RPTRKG
Trigger: TCCTTTCCTGGTGGGCCTTCAGAGGGGCCGCTGCTG...AAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAAACTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR GCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCTGGGCCCATCTCTCTTaGAAAGTGCTCAGGACGCCC +
Preference number: 2 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCWAHLS*KVLRTP
Trigger: GGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCA...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR GCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAAATCCAGGTGTGAGCTaGCCCCACAAGCAGGGAGTA +
Preference number: 2 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSNPGVS*PHKQGV
Trigger: TACTCCCTGCTTGTGGGGGCAGCTCACACCTGGATT...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCACTGACGGCAGGCCCCTaGAGTGCTATGTGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPLTAGP*SAMCFS
Trigger: AGAGAAGCACATAGCACTGCAGGGGCCTGCCGTCAG...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCATGGCCAAAGCCCTGCTaGTCCTGCTTGTTCTCCGGT +
Preference number: 2 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPWPKPC*SCLFSG
Trigger: ACCGGAGAACAAGCAGGAGCAGCAGGGCTTTGGCCA...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGGGGCCCAGACCTCCCTaGCGGCCACTGCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: PQTLRMADRGKPILWRIKGPRPP*RPLQVR
Trigger: CCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCC...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCAATGACTTTGCCTTCTaGGACAGAGCTCCTGGGACA +
Preference number: 2 (lower is better)
Translates to: PVKARALSHPLLSCPGPLNDFAF*DRAPGT
Trigger: TGTCCCAGGAGCTCTGTCCCAGAAGGCAAAGTCATT...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCAAGGCTGCCTTAGTCTaGCCTTCACCCCGTGATGAT +
Preference number: 2 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSKAALV*PSPRDD
Trigger: ATCATCACGGGGTGAAGGTCAGACTAAGGCAGCCTT...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp ACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCCTGGGCAACCTGGGTTaGTTCACCTGGACCACGGGA +
Preference number: 2 (lower is better)
Translates to: TLFPMGRTLSLWCNFWPGLGNLG*FTWTTG
Trigger: TCCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAG...GCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CCA 90 bp TTCTCCAGATTGACCACAGACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACCGTGCTGGTGCTGAGCTaGGTCCAAAAGTCTGCACAG +
Preference number: 2 (lower is better)
Translates to: FSRLTTDSLRTMACWLSTVLVLS*VQKSAQ
Trigger: CTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCAC...GGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCCTGGGCCAGCAGAACTaGCTGGAAACAGTGAACACC +
Preference number: 2 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCLGQQN*LETVNT
Trigger: GGTGTTCACTGTTTCCAGCCAGTTCTGCTGGCCCAG...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCACTCCTGCTTGCAGGCTaGTCTTCAGACAGAGACAGG +
Preference number: 2 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPLLLAG*SSDRDR
Trigger: CCTGTCTCTGTCTGAAGACCAGCCTGCAAGCAGGAG...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTGATAAGCAGGTCCTGTaGCTGCATCCCACAGGCCCC +
Preference number: 2 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIDKQVL*LHPTGP
Trigger: GGGGCCTGTGGGATGCAGCCACAGGACCTGCTTATC...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATCCCGGGTGCTGGTGCTaGGCTGGGTCCAAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNPGCWC*AGSKSL
Trigger: CAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGG...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp GTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTTGGCCAGGCTGGTTCTaGACCCCCTCAGCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: VHFPQSPCSQWGGLCLSGWPGWF*TPSACE
Trigger: TTCACAGGCTGAGGGGGTTCAGAACCAGCCTGGCCA...ACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp ACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCAGGTGTTGGTCAGCCTaGCGTCCTGGCTTCCATGGT +
Preference number: 2 (lower is better)
Translates to: TLFPMGRTLSLWCNFWPGRCWSA*RPGFHG
Trigger: ACCATGGAAGCCAGGACGTCAGGCTGACCAACACCT...GCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCGCTCGCTCGTCTGGCTaGAGAATTCCTCATCAAAGT +
Preference number: 2 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSARSSG*RIPHQS
Trigger: ACTTTGATGAGGAATTCTTCAGCCAGACGAGCGAGC...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR GCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWLGPKV*TEGSPA
Trigger: AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAG...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCTGGGCCCATCTCTCTTaGAAAGTGCTCAGGACGCCC +
Preference number: 2 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPWAHLS*KVLRTP
Trigger: GGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCA...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCACGACCATGTGGCCTTaGGCTTCCCCATCTTTATGT +
Preference number: 2 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASTTMWP*ASPSLC
Trigger: ACATAAAGATGGGGAAGCGCAAGGCCACATGGTCGT...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAATGCATGGGTTTCCTTaGTCCCCCTTTCTGCATGGT +
Preference number: 2 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSMHGFP*SPFLHG
Trigger: ACCATGCAGAAAGGGGGAGCAAGGAAACCCATGCAT...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGCTCCATCCCTTCACTaGCAGGCTCCCACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHAPSLH*QAPTAA
Trigger: TGCAGCTGTGGGAGCCTGGCAGTGAAGGGATGGAGC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGCTCCCAGGGTCTCCTaGCTTGCCTGCAAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLAPRVS*LACKLF
Trigger: GAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGC...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CCA 90 bp ACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTCCCCCTCCCACTCCTaGGCCTTCATGTGGTCTTTC +
Preference number: 2 (lower is better)
Translates to: TLFPMGRTLSLWCNFWPGSPSHS*AFMWSF
Trigger: GAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGA...GCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTGAGGCCGCAGCAGGGTaGATGAGAACATGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIEAAAG*MRTCFC
Trigger: GCAGAAGCATGTTCTCATCCACCCTGCTGCGGCCTC...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCACATGAAACGACCATGTaGCCTTGCGCTTCCCCATCT +
Preference number: 2 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPHETTM*PCASPS
Trigger: AGATGGGGAAGCGCAAGGCCACATGGTCGTTTCATG...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTGCACCTGGAACCCGCTaGCTTCTCATGACTTTCGGG +
Preference number: 2 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIAPGTR*LLMTFG
Trigger: CCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGC...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp AGGGACAGGCAGCTGCCTTCCCCAAGGGCCAGCTTGCCAGCTTCCTaGAGAATTGTTATTCAGGGCGATGTCATACACTCACTTTCCCCT +
Preference number: 2 (lower is better)
Translates to: RDRQLPSPRASLPAS*RIVIQGDVIHSLSP
Trigger: AGGGGAAAGTGAGTGTATGACATCGCCCTGAATAACAATTCTCAAGGAAGCTGGCAAGCTGGCCCTTGGGGAAGGCAGCTGCCTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp TGGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTAGAGAGACTGGAGGATGGGCGTAACTCACTGCTGTaGTATTTGCCAGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: WSVAAGSPELSLERLEDGRNSLL*YLPVFP
Trigger: AGGAAACACTGGCAAATATCACAGCAGTGAGTTACG...CCCATCCTCCAGTCTCTCTAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR TCA 90 bp AGAAATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGCACCCACCTGCCTTGTaGGGGGAAAGGGAACTCACC +
Preference number: 2 (lower is better)
Translates to: RNFRETHSAPNSRSGGSEHPPAL*GERELT
Trigger: GGTGAGTTCCCTTTCCCCTCACAAGGCAGGTGGGTG...CTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR GCA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVLGPKV*TEGSPA
Trigger: AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAG...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTTGGGCCCATCTCTCTTaGAAAGTGCTCAGGACGCCC +
Preference number: 2 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCWAHLS*KVLRTP
Trigger: GGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCA...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp AGAAATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGAGCTGGGATGCCAGGTaGCTACCCCTACACCTGGCT +
Preference number: 2 (lower is better)
Translates to: RNFRETHSAPNSRSGGSESWDAR*LPLHLA
Trigger: AGCCAGGTGTAGGGGTAGGCACCTGGCATCCCAGCT...CTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR GCA 90 bp ACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTCTGGGCTTAAGCAATaGTGTCACCTCAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: TLFPMGRTLSLWCNFWPGSGLKQ*CHLSPW
Trigger: CCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAGA...GCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR GCA 90 bp CTGGGCTTAAGCAATGCTGTCACCTCAGCCCCTGGAGTAGCTGGGATGCCAGGTTTTGCCAGTGTTTCCTaGTTCGTGTCTCCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LGLSNAVTSAPGVAGMPGFASVS*FVSPRK
Trigger: TTTCCTGGGAGACACGAAGCAGGAAACACTGGCAAA...ACCTGGCATCCCAGCTACTCCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR GCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGGGCAGGCCCCTGCAGTaGTATGTGCTTCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKGRPLQ*YVLLSQ
Trigger: CTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCC...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGGTGCTGGTGCTGAGCTaGGTCCAAAAGTCTGCACAG +
Preference number: 2 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWVLVLS*VQKSAQ
Trigger: CTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCAC...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CCA 90 bp GTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTCAGCCTGACGTCCTaGCTTCCATGGTTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: VHFPQSPCSQWGGLCLSGVSLTS*LPWFWE
Trigger: CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGAC...ACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCCAATTCTGGATTCTGTaGAGGGGCTGGAAGGCTATA +
Preference number: 2 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCQFWIL*RGWKAI
Trigger: TATAGCCTTCCAGCCCCTCCACAGAATCCAGAATTG...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGTCCCTCCCCAGCACCTaGAACCCGCTGGCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGSLPST*NPLASH
Trigger: ATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAGGGA...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp GAACCTCCTGTTGAGGACCTTCTGGCCTTTATTCTCGACACAGAGTaGGGGCCGTTAGCCAGAAGAGGAGAAAGGGTGGAGAATGGGAAG +
Preference number: 2 (lower is better)
Translates to: EPPVEDLLAFILDTE*GPLARRGERVENGK
Trigger: CTTCCCATTCTCCACCCTTTCTCCTCTTCTGGCTAACGGCCCCAACTCTGTGTCGAGAATAAAGGCCAGAAGGTCCTCAACAGGAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp TCTAGGCACCAGCGAAACAGTCCATTCTCACAGCCCTTCCCGCCATaGTTAGCCCTCCACACTGTTGTAAAAAGTCAGCTGAGGGCGTGT +
Preference number: 2 (lower is better)
Translates to: SRHQRNSPFSQPFPP*LALHTVVKSQLRAC
Trigger: ACACGCCCTCAGCTGACTTTTTACAACAGTGTGGAGGGCTAACAATGGCGGGAAGGGCTGTGAGAATGGACTGTTTCGCTGGTGCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGGCCTGCAAGCTCTTCTaGATTCCTTGGGCCCATCTC +
Preference number: 2 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVACKLF*IPWAHL
Trigger: GAGATGGGCCCAAGGAATTCAGAAGAGCTTGCAGGC...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGAAAGCAAACCTGCATaGGTACCACCGGCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHESKPA*VPPAWD
Trigger: GTCCCAAGCCGGTGGTACTCATGCAGGTTTGCTTTC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGATCTCTCTTGCAAAGTaGTCAGGACGCCCGGGTGCT +
Preference number: 2 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWISLAK*SGRPGA
Trigger: AGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGAT...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTAAGCCCTGCTGCTCCTaGTTGTTCTCCGGTCATTTC +
Preference number: 2 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIKPCCS*LFSGHF
Trigger: GAAATGACCGGAGAACAAGCAGGAGCAGCAGGGCTT...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGCCTTCAAGGCCCAATaGCCTAGGTACATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRAFKAQ*PRYIRK
Trigger: TTTTCTTATGTACCTAGGCCATTGGGCCTTGAAGGC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACTCCAATCTAGTTGGCTaGGTCCCCATCTGCCCCAGA +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHSNLVG*VPICPR
Trigger: TCTGGGGCAGATGGGGACCCAGCCAACTAGATTGGA...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATGCCTGCAAGCTCTTCTaGATTCCTTGGGCCCATCTC +
Preference number: 2 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNACKLF*IPWAHL
Trigger: GAGATGGGCCCAAGGAATTCAGAAGAGCTTGCAGGC...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR TCA 90 bp GTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTCTGGTCTCCAACTCCTaGGTTCAAGCAATTCCCCTG +
Preference number: 2 (lower is better)
Translates to: VHFPQSPCSQWGGLCLSGLVSNS*VQAIPL
Trigger: CAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAG...ACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGATAGGGATGTTTTGTaGGGCCATGAAGACACTTTG +
Preference number: 2 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPDRDVL*GHEDTL
Trigger: CAAAGTGTCTTCATGGCCTCACAAAACATCCCTATC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: KMSKITTWRASNGLLQKVLGPKV*TEGSPA
Trigger: AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAG...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAGCCTGTGAAGAAGGCTaGCTTAGTCTGACCTTCACC +
Preference number: 2 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVACEEG*LSLTFT
Trigger: GGTGAAGGTCAGACTAAGGCAGCCTTCTTCACAGGC...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTATCCCCTGCCTCGGACTaGCAAAGCGCAGGGATTATA +
Preference number: 2 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVSPASD*QSAGII
Trigger: TATAATCCCTGCGCTTTGGCAGTCCGAGGCAGGGGA...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGTGCTGGTGCTGAGCTaGGTCCAAAAGTCTGCACAG +
Preference number: 2 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPVLVLS*VQKSAQ
Trigger: CTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCAC...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTGAGCTTTGGGAATGCTaGAGCCTCCTCCACAGAAGA +
Preference number: 2 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCELWEC*SLLHRR
Trigger: TCTTCTGTGGAGGAGGCTCCAGCATTCCCAAAGCTC...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTCAGGATAATTCTAGCTaGAGGCCGCAGCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGQDNSS*RPQQGG
Trigger: TCCACCCTGCTGCGGCCTCCAGCTAGAATTATCCTG...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTAGGATTTCTCCATGTTaGCCAGGCTGGTCTCACACT +
Preference number: 2 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIRISPC*PGWSHT
Trigger: AGTGTGAGACCAGCCTGGCCAACATGGAGAAATCCT...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGTAATTCCAGCACTTTaGAAGGCCGAGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHVIPAL*KAEVGG
Trigger: TCCACCCACCTCGGCCTTCCAAAGTGCTGGAATTAC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp AAAGCTCCCATTCTAAAGCAGCTTTTGGGTTATCAGAAATACATTTaGGGTTGTCTGTGGTCAGCCGGCAGCAGCGGCCCCTCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: KAPILKQLLGYQKYI*GCLWSAGSSGPSEG
Trigger: GCCTTCAGAGGGGCCGCTGCTGCCGGCTGACCACAGACAACCCAAAATGTATTTCTGATAACCCAAAAGCTGCTTTAGAATGGGAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR TCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACCAAAGCTTTGGGTCATaGAACGACCATGTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHQSFGS*NDHVAL
Trigger: CAAGGCCACATGGTCGTTTCATGACCCAAAGCTTTG...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCTGTTTTGTGAGGCCATaGAGACACTTTGAACTATAC +
Preference number: 2 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCCFVRP*RHFELY
Trigger: GTATAGTTCAAAGTGTCTTCATGGCCTCACAAAACA...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAGGGTGGATGAGAACATaGTTCTGCAAACCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPGWMRT*FCKPLG
Trigger: CCCAAGAGGTTTGCAGAAGCATGTTCTCATCCACCC...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGATCCTTGGGGAGGGGTaGTCAAAGCTTTGGGTCATG +
Preference number: 2 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKILGEG*SKLWVM
Trigger: CATGACCCAAAGCTTTGAGCACCCCTCCCCAAGGAT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGTCTGTTGACATGAGTTaGTTGACTGTCCCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKSVDMS*LTVPSP
Trigger: GGGGGAGGGGACAGTCAACCAACTCATGTCAACAGA...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp ATGTCATACACTCACTTTCCCCTCCCAAACAGCCCAGGATGGTGTTaGAACAGAGCACAGAAGCCGACCTTTTATTTGCAGTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: MSYTHFPLPNSPGWC*NRAQKPTFYLQSGL
Trigger: CAGCCCAGACTGCAAATAAAAGGTCGGCTTCTGTGCTCTGTTCAAACACCATCCTGGGCTGTTTGGGAGGGGAAAGTGAGTGTATGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAAAAGGAACCTCCTGTTaGGGACCTTCTGGCCTTTAT +
Preference number: 2 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPKGTSC*GPSGLY
Trigger: ATAAAGGCCAGAAGGTCCTCAACAGGAGGTTCCTTT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTCCAGAGAAAGGGAGATaGGATCTTATAATCCTTGGG +
Preference number: 2 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIPEKGR*DLIILG
Trigger: CCCAAGGATTATAAGATCTCATCTCCCTTTCTCTGG...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp CCCCGTGATGATGAGGATGTCCTTTATATTGTTTTCCTAAGTCCACACTCCCACATCTCTCTTGCAAAGTaGTCAGGACGCCCGGGTGCT +
Preference number: 2 (lower is better)
Translates to: PRDDEDVLYIVFLSPHSHISLAK*SGRPGA
Trigger: AGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGAT...GTGGGAGTGTGGACTTAGGAAAACAATATAAAGGACATCCTCATCATCACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCGCCTGTGAAGAAGGCTaGCTTAGTCTGACCTTCACC +
Preference number: 2 (lower is better)
Translates to: KMSKITTWRASNGLLQKVACEEG*LSLTFT
Trigger: GGTGAAGGTCAGACTAAGGCAGCCTTCTTCACAGGC...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR GCA 90 bp TCCCCTTCTTATAAGGACACCAATTATATTGCATCGGGGCCCATATCAGTGAGCTCTGGGCTTAAGCAATaGTGTCACCTCAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: SPSYKDTNYIASGPISVSSGLKQ*CHLSPW
Trigger: CCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAGA...GCTCACTGATATGGGCCCCGATGCAATATAATTGGTGTCCTTATAAGAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR GCA 90 bp TTCATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTCCAGGAGTTCATGCTaGTGCATCAGTGGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: FMWSFLRVLTSPSYKDTNSRSSC*CISGPL
Trigger: GAGGGGACCACTGATGCAGCAGCATGAACTCCTGGA...ATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CCA 90 bp ATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTATGTCAGCCTGACGTCCTaGCTTCCATGGTTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: MWSFLRVLTSPSYKDTNYVSLTS*LPWFWE
Trigger: CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGAC...ATAATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CCA 90 bp ATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTATATTTTGGGTTGTCTGTaGTCAGCCGGCAGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: MWSFLRVLTSPSYKDTNYILGCL*SAGSSG
Trigger: GCCGCTGCTGCCGGCTGACCACAGACAACCCAAAAT...ATAATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATAGCACCTCAGCAATTCTaGATTCTGTGGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIAPQQF*ILWRGW
Trigger: CCAGCCCCTCCACAGAATCCAGAATTGCTGAGGTGC...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAGGGTGCTCAAAGCTTTaGGTCATGAAACGACCATGT +
Preference number: 2 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPGCSKL*VMKRPC
Trigger: ACATGGTCGTTTCATGACCCAAAGCTTTGAGCACCC...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCATGCTTGATGTTCTTTTaGATCACACTGATAGTGCAA +
Preference number: 2 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSCLMFF*ITLIVQ
Trigger: TTGCACTATCAGTGTGATCCAAAAGAACATCAAGCA...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAGTAAGATGTAGGAAATaGAGCTTTTGCCATCTTTCA +
Preference number: 2 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSVRCRK*SFCHLS
Trigger: TGAAAGATGGCAAAAGCTCCATTTCCTACATCTTAC...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACCTCTCCTTAGAAACCTaGCTGTGTGAAGGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHLSLET*LCEGQG
Trigger: ACCTTGACCTTCACACAGCCAGGTTTCTAAGGAGAG...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp TTACAATTTTTGAGGCCAGAGTCTAAGATTGAGGTGTCAGCAGGGTaGGTTTCCTCTGAGGCCCCCTTAGTTTGTCGATGGCTATTCCCC +
Preference number: 2 (lower is better)
Translates to: LQFLRPESKIEVSAG*VSSEAPLVCRWLFP
Trigger: GGGGAATAGCCATCGACAAACTAAGGGGGCCTCAGAGGAAACCAACCCTGCTGACACCTCAATCTTAGACTCTGGCCTCAAAAATTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR CAA 90 bp TTCTGGAGCCTGGCGCAGCCAGGGGAAGCAGAAAGAGCAACAGACTaGTCATTAGAAGGTCTCTACTTTTGCCATAATGATGTGACCTTG +
Preference number: 2 (lower is better)
Translates to: FWSLAQPGEAERATD*SLEGLYFCHNDVTL
Trigger: CAAGGTCACATCATTATGGCAAAAGTAGAGACCTTCTAATGACAAGTCTGTTGCTCTTTCTGCTTCCCCTGGCTGCGCCAGGCTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp ATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTATGCCTGCAAGCTCTTCTaGATTCCTTGGGCCCATCTC +
Preference number: 2 (lower is better)
Translates to: MWSFLRVLTSPSYKDTNYACKLF*IPWAHL
Trigger: GAGATGGGCCCAAGGAATTCAGAAGAGCTTGCAGGC...ATAATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp TTCATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATAAGGCTGCCTTAGTCTaGCCTTCACCCCGTGATGAT +
Preference number: 2 (lower is better)
Translates to: FMWSFLRVLTSPSYKDTNKAALV*PSPRDD
Trigger: ATCATCACGGGGTGAAGGTCAGACTAAGGCAGCCTT...ATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR TCA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTACCATCTTCTATTTCGTaGGCCAGACCAAAGTCAATC +
Preference number: 2 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVPSSIS*ARPKSI
Trigger: GATTGACTTTGGTCTGGCTCACGAAATAGAAGATGG...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR TCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTACCTTCCTATCTCACTaGGTTCTTTTAAGGACCAAG +
Preference number: 2 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGITFLSH*VLLRTK
Trigger: CTTGGTCCTTAAAAGAACTCAGTGAGATAGGAAGGT...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGACAGACACACACCCCTaGAGGATAATTCTAGCTGGA +
Preference number: 2 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGTDTHP*RIILAG
Trigger: TCCAGCTAGAATTATCCTGCAGGGGTGTGTGTCTGT...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp TCCCCTTCTTATAAGGACACCAATTATATTGCATCGGGGCCCATATCAGTGAGCGAGCTTTGGGAATGCTaGAGCCTCCTCCACAGAAGA +
Preference number: 2 (lower is better)
Translates to: SPSYKDTNYIASGPISVSELWEC*SLLHRR
Trigger: TCTTCTGTGGAGGAGGCTCCAGCATTCCCAAAGCTC...GCTCACTGATATGGGCCCCGATGCAATATAATTGGTGTCCTTATAAGAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGCTTCTGCAAACCTCTTaGGATGCATCACTGACTGGA +
Preference number: 2 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKLLQTS*DASLTG
Trigger: TCCAGTCAGTGATGCATCCCAAGAGGTTTGCAGAAG...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTAGACAGAGACAGGGATaGGTAGGGACAATGACTTTG +
Preference number: 2 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGRQRQG*VGTMTL
Trigger: CAAAGTCATTGTCCCTACCCATCCCTGTCTCTGTCT...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp AGTGAACAAGCCAGTGGAAGGAGGCAGAAACATTCCTTTCCTTGCTaGGCCTGGTCTCACATTTCTGAGTTAGGTCTTGACATGGATACG +
Preference number: 2 (lower is better)
Translates to: SEQASGRRQKHSFPC*AWSHISELGLDMDT
Trigger: CGTATCCATGTCAAGACCTAACTCAGAAATGTGAGACCAGGCCAAGCAAGGAAAGGAATGTTTCTGCCTCCTTCCACTGGCTTGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCAGGGGAGGTGCAGAATaGAGAATTAACTGGCACCTC +
Preference number: 2 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFRGGAE*RINWHL
Trigger: GAGGTGCCAGTTAATTCTTCATTCTGCACCTCCCCT...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp ATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTATGCCTGTGAAGAAGGCTaGCTTAGTCTGACCTTCACC +
Preference number: 2 (lower is better)
Translates to: MWSFLRVLTSPSYKDTNYACEEG*LSLTFT
Trigger: GGTGAAGGTCAGACTAAGGCAGCCTTCTTCACAGGC...ATAATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACTGCATTGTAAATCCCTaGTTCTGTAGCAGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHCIVNP*FCSRKA
Trigger: TGCTTTCCTGCTACAGAAGCAGGGATTTACAATGCA...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATACTTGCTCCCCCTTTCTaGATGGTGGCTCTATTTCTC +
Preference number: 2 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLILAPPF*MVALFL
Trigger: GAGAAATAGAGCCACCATGCAGAAAGGGGGAGCAAG...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGCTCCCCCTTTCTGCATaGTGGCTCTATTTCTCATTT +
Preference number: 2 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKLPLSA*WLYFSF
Trigger: AAATGAGAAATAGAGCCACCATGCAGAAAGGGGGAG...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCAAAGTCAATCAGCTTaGTGTGTGGAATGGGAATAT +
Preference number: 2 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCQSQSA*CVEWEY
Trigger: ATATTCCCATTCCACACATCAAGCTGATTGACTTTG...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR TCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGCTTTTAAGGACCAAGTaGGGTCATTTGTCAGACATG +
Preference number: 2 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGLLRTK*GHLSDM
Trigger: CATGTCTGACAAATGACCTCACTTGGTCCTTAAAAG...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAAGCTCTATCTCTCTGTaGTTCTTGGTCAATGTTCAA +
Preference number: 2 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPSSISL*FLVNVQ
Trigger: TTGAACATTGACCAAGAATCACAGAGAGATAGAGCT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGCCTGCATTCTATTTTaGCCTTCACTAAAAAGCTTG +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHACILF*PSLKSL
Trigger: CAAGCTTTTTAGTGAAGGTCAAAATAGAATGCAGGC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGGACATTACACTCTCTaGTTGATGTTCTTTTGGATC +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHGHYTL*LMFFWI
Trigger: GATCCAAAAGAACATCAAGCAGAGAGTGTAATGTCC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTAGTAGTTCACAATTTCTaGAGCAACAAATTCCGGCGT +
Preference number: 2 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVVVHNF*SNKFRR
Trigger: ACGCCGGAATTTGTTGCTCCAGAAATTGTGAACTAC...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CAA 90 bp AAGAGACTTGAGAGACGTAGCAACCAAATGCCACATGTGGACTGTTaGGATCCTGATTTGAACAAACCAGCTGTAATGGGACACTGTTGG +
Preference number: 2 (lower is better)
Translates to: KRLERRSNQMPHVDC*DPDLNKPAVMGHCW
Trigger: CCAACAGTGTCCCATTACAGCTGGTTTGTTCAAATCAGGATCCAAACAGTCCACATGTGGCATTTGGTTGCTACGTCTCTCAAGTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCAGATCTTATAATCCTTaGGGAGGGGTGCTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFRSYNP*GGVLKA
Trigger: AGCTTTGAGCACCCCTCCCCAAGGATTATAAGATCT...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCACCTGGCAGAATACATaGAGTTGCTTACTTTACCTC +
Preference number: 2 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPTWQNT*SCLLYL
Trigger: GAGGTAAAGTAAGCAACTTCATGTATTCTGCCAGGT...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATAGCCATGAAGACACTTTaGACTATACAAGTTATGCCC +
Preference number: 2 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIAMKTL*TIQVMP
Trigger: GGGCATAACTTGTATAGTTCAAAGTGTCTTCATGGC...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACTTCCTTATACTTCTGTaGAAGTTTTGGCAATTTTCC +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHFLILL*KFWQFS
Trigger: GGAAAATTGCCAAAACTTGCACAGAAGTATAAGGAA...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACCATCTGGAAGTTGGTTaGTGCCTAAGTATAATTTAT +
Preference number: 2 (lower is better)
Translates to: RHEKGILALLKRRLPQLHHLEVG*CLSIIY
Trigger: ATAAATTATACTTAGGCACCAACCAACTTCCAGATG...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGTTTGTCAGACATGAGTaGTTGGTAAGTGAAAAATCA +
Preference number: 2 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGFVRHE*LVSEKS
Trigger: TGATTTTTCACTTACCAAGCACTCATGTCTGACAAA...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATATCCTCAGCTCTAAATTaGGAATATCGTTTAGTCTGC +
Preference number: 2 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLISSALN*EYRLVC
Trigger: GCAGACTAAACGATATTCCCAATTTAGAGCTGAGGA...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR GCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGGCAAACCTCTTGGGATaGATCACTGACTGGATTCTG +
Preference number: 2 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQANLLG*ITDWIL
Trigger: CAGAATCCAGTCAGTGATGCATCCCAAGAGGTTTGC...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGTATGCCATGCTCTGTTaGCATGAGTTGGTTGACTGT +
Preference number: 2 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQYAMLC*HELVDC
Trigger: ACAGTCAACCAACTCATGTCAACAGAGCATGGCATA...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CCA 90 bp GCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACAATCAGCTTGATGTGTaGAATGGGAATATTCTTGTC +
Preference number: 2 (lower is better)
Translates to: ASLQEGFKQQQLLTLTEHNQLDV*NGNILV
Trigger: GACAAGAATATTCCCATTCCACACATCAAGCTGATT...GTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR TCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGGAAGAAATGGTTTCATaGGATGAAGCTTTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQEEMVS*DEAFLS
Trigger: AGACAGGAAAGCTTCATCTCATGAAACCATTTCTTC...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 90 bp GGATGGAATGGGAATCCAGATGAGATGAAGGAATTATTGCTGATTTaGTCAAGTGTGATAATGGCATGGGGTTGTATTAAAAAGAAAGTC +
Preference number: 2 (lower is better)
Translates to: GWNGNPDEMKELLLI*SSVIMAWGCIKKKV
Trigger: GACTTTCTTTTTAATACAACCCCATGCCATTATCACACTTGACAAAATCAGCAATAATTCCTTCATCTCATCTGGATTCCCATTCCATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR TCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGTATGTAGGCAGAAAGTaGGATATGAACAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQYVGRK*DMNKSF
Trigger: GAAGGATTTGTTCATATCTCACTTTCTGCCTACATA...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp GGAGCCCCGCTGGGCCCAGACCTCCCTGGCGGCCACTaGAGGTCAGGCCAGTTAGGAGGTGCTGCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: GAPLGPDLPGGH*RSGQLGGAAPP
Trigger: AGGAGGAGCAGCACCTCCTAACTGGCCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCCAGCGGGGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 72 bp CGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCTGGGCCCAGACCTCCC +
Preference number: 3 (lower is better)
Translates to: RPGAGAELGPKV*TEGSPAGPRPP
Trigger: GGGAGGTCTGGGCCCAGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR GCA 72 bp CCCTGGCGGCCACTGCAGGTCAGGCCAGTTAGGAGGTaGTGCTCCTCCTCCGTGGGTGGAGGGCTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: PWRPLQVRPVRR*CSSSVGGGLSS
Trigger: GGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGCACCTCCTAACTGGCCTGACCTGCAGTGGCCGCCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp ACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTaGGATTCTGCCCACTCAGCACCCCACTGGGTGCCC +
Preference number: 3 (lower is better)
Translates to: TAGLRGRFRRTF*DSAHSAPHWVP
Trigger: GGGCACCCAGTGGGGTGCTGAGTGGGCAGAATCTCAGAAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR TCA 72 bp GGGTTGTCTGTGGTCAGCCGGCAGCAGCGGCCCCTCTaGAGGCCCACCAGGAAAGGATGGGAGATCCTCCAG +
Preference number: 3 (lower is better)
Translates to: GLSVVSRQQRPL*RPTRKGWEILQ
Trigger: CTGGAGGATCTCCCATCCTTTCCTGGTGGGCCTTCAGAGGGGCCGCTGCTGCCGGCTGACCACAGACAACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp GTGGAGGAGGGCGGTCACTGGTGGGGACGGCGTCCCTaGGAAGGCCTCTCTTCTCTGCAACCCTCTTACCCT +
Preference number: 3 (lower is better)
Translates to: VEEGGHWWGRRP*EGLSSLQPSYP
Trigger: AGGGTAAGAGGGTTGCAGAGAAGAGAGGCCTTCCCAGGGACGCCGTCCCCACCAGTGACCGCCCTCCTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp AAGGGACACAGCTTGGGAGTGGAGGAGGGCGGTCACTaGTGGGGACGGCGTCCCTGGGAAGGCCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: KGHSLGVEEGGH*WGRRPWEGLSS
Trigger: AGAAGAGAGGCCTTCCCAGGGACGCCGTCCCCACCAGTGACCGCCCTCCTCCACTCCCAAGCTGTGTCCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp CTTCCTGTTAGGGAAGCAAGGAGGAGGCAGGCCCACTaGAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTG +
Preference number: 3 (lower is better)
Translates to: LPVREARRRQAH*RPARTVQEDLL
Trigger: CAGAAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCTTCCCTAACAGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR CCA 72 bp AGGTCAGGCCAGTTAGGAGGTGCTGCTCCTCCTCCGTaGGTGGAGGGCTTTCCTCCTGGCGATGTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: RSGQLGGAAPPP*VEGFPPGDVLL
Trigger: GAGGAGGACATCGCCAGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGCACCTCCTAACTGGCCTGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CAA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCGGGCTTGTGGGAGGCTaGAGGCTCTGCCTCCTCCTA +
Preference number: 3 (lower is better)
Translates to: PVKARALSHPLLSCPGPLGLVGG*RLCLLL
Trigger: TAGGAGGAGGCAGAGCCTCAAGCCTCCCACAAGCCC...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCCCCTGCTGCTCCTGCTaGTTCTCCGGTCATTTCCGC +
Preference number: 3 (lower is better)
Translates to: PVKARALSHPLLSCPGPLPCCSC*FSGHFR
Trigger: GCGGAAATGACCGGAGAACAAGCAGGAGCAGCAGGG...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp CTGCTTCAGGACGCTTCCCCCGATGCTGTCAGACCCTaGCGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: LLQDASPDAVRP*RQAPAVLCASL
Trigger: GAGAGAAGCACATAGCACTGCAGGGGCCTGCCGTCAGGGTCTGACAGCATCGGGGGAAGCGTCCTGAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp CCACCAGGAAAGGATGGGAGATCCTCCAGGAGTTCATaGTGCTGCATCAGTGGTCCCCTCCCGGCACCACCC +
Preference number: 3 (lower is better)
Translates to: PPGKDGRSSRSS*CCISGPLPAPP
Trigger: GGGTGGTGCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCCTTTCCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp TGGGAGATCCTCCAGGAGTTCATGCTGCTGCATCAGTaGTCCCCTCCCGGCACCACCCAGAGGTCCCCAGAA +
Preference number: 3 (lower is better)
Translates to: WEILQEFMLLHQ*SPPGTTQRSPE
Trigger: TTCTGGGGACCTCTGGGTGGTGCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp GCCACCTCCAGCAAGGGCCGGGCCACCTGTGCTGCGTaGTGGAGTGAGGTAGGAAGCCACCATCTTCATGAT +
Preference number: 3 (lower is better)
Translates to: ATSSKGRATCAA*WSEVGSHHLHD
Trigger: ATCATGAAGATGGTGGCTTCCTACCTCACTCCATCACGCAGCACAGGTGGCCCGGCCCTTGCTGGAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp TCCAGATTGACCACAGACTCCCTGCGCACCATGGCTTaGTGGTTGTCCACCGGCGTGATCCAGGGGTGTCTG +
Preference number: 3 (lower is better)
Translates to: SRLTTDSLRTMA*WLSTGVIQGCL
Trigger: CAGACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 72 bp GGAAAGGATGGGAGATCCTCCAGGAGTTCATGCTGCTaGATCAGTGGTCCCCTCCCGGCACCACCCAGAGGT +
Preference number: 3 (lower is better)
Translates to: GKDGRSSRSSCC*ISGPLPAPPRG
Trigger: ACCTCTGGGTGGTGCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 72 bp CCAGGAAAGGATGGGAGATCCTCCAGGAGTTCATGCTaGTGCATCAGTGGTCCCCTCCCGGCACCACCCAGA +
Preference number: 3 (lower is better)
Translates to: PGKDGRSSRSSC*CISGPLPAPPR
Trigger: TCTGGGTGGTGCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCCTTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp CAGGAGGATCATGAGACGCCAGGAATGGGGCTGTGCTaGGCAACCTGGGTTGATTCACCTGGACCACGGGAC +
Preference number: 3 (lower is better)
Translates to: QEDHETPGMGLC*ATWVDSPGPRD
Trigger: GTCCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAGCACAGCCCCATTCCTGGCGTCTCATGATCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp TGCTGCTCCTCCTCCGTGGGTGGAGGGCTTTCCTCCTaGCGATGTCCTCCTCAGTGTCACTCTCACAGTTCC +
Preference number: 3 (lower is better)
Translates to: CCSSSVGGGLSS*RCPPQCHSHSS
Trigger: GGAACTGTGAGAGTGACACTGAGGAGGACATCGCCAGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp TCACGGGGCATTCCCTCCCCAGCACCTGGAACCCGCTaGCTTCTCATGACTTTCGGGATAAGGGCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: SRGIPSPAPGTR*LLMTFGIRAEL
Trigger: GAGCTCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAGGGAATGCCCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCCAGGATTTCTCCATGTaGGCCAGGCTGGTCTCACAC +
Preference number: 3 (lower is better)
Translates to: PVKARALSHPLLSCPGPLQDFSM*ARLVSH
Trigger: GTGTGAGACCAGCCTGGCCAACATGGAGAAATCCTG...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp AGATTGACCACAGACTCCCTGCGCACCATGGCTTGCTaGTTGTCCACCGGCGTGATCCAGGGGTGTCTGAGA +
Preference number: 3 (lower is better)
Translates to: RLTTDSLRTMAC*LSTGVIQGCLR
Trigger: TCTCAGACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp GATTCACCTGGACCACGGGACTACAAGCCAGGGAGGTaGGTGGTGAAAGCAAGCCTGCTGATCCATCCAGGG +
Preference number: 3 (lower is better)
Translates to: DSPGPRDYKPGR*VVKASLLIHPG
Trigger: CCCTGGATGGATCAGCAGGCTTGCTTTCACCACCCACCTCCCTGGCTTGTAGTCCCGTGGTCCAGGTGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp CATGAGACGCCAGGAATGGGGCTGTGCTGGGCAACCTaGGTTGATTCACCTGGACCACGGGACTACAAGCCA +
Preference number: 3 (lower is better)
Translates to: HETPGMGLCWAT*VDSPGPRDYKP
Trigger: TGGCTTGTAGTCCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAGCACAGCCCCATTCCTGGCGTCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CAA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCTTGGGCCCATCTCTCTaGCAAAGTGCTCAGGACGCC +
Preference number: 3 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVLGPSL*QSAQDA
Trigger: GGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAA...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CAA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCCCAGGGTCTCCTGGCTaGCCTGCAAGCTCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSPGSPG*PASSSE
Trigger: TTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGG...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CAA 90 bp TTAGTTTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCGCACCATGGCTaGCTGGTTGTCCACCGGCGT +
Preference number: 3 (lower is better)
Translates to: LVCRWLFPLPLLGLHVVFPAHHG*LVVHRR
Trigger: ACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGG...AAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAAACTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp TGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCCTaGCGTCCTGGCTTCCATGGTTCTGGGAGGTCACAG +
Preference number: 3 (lower is better)
Translates to: WAASEGLRCWSA*RPGFHGSGRSQ
Trigger: CTGTGACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCTGAAGCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR TCA 72 bp GAGGAGGACTGGGCCAGCAGAACTGGCTGGAAACAGTaGACACCCACCTGCCTTGTGAGGGGAAAGGGAACT +
Preference number: 3 (lower is better)
Translates to: EEDWASRTGWKQ*TPTCLVRGKGT
Trigger: AGTTCCCTTTCCCCTCACAAGGCAGGTGGGTGTTCACTGTTTCCAGCCAGTTCTGCTGGCCCAGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp CCGGCACCACCCAGAGGTCCCCAGAACACACTCCTCTaGAGATCACACTTCAGCCTTCAGGGAAGAGGAGGA +
Preference number: 3 (lower is better)
Translates to: PAPPRGPQNTLL*RSHFSLQGRGG
Trigger: TCCTCCTCTTCCCTGAAGGCTGAAGTGTGATCTTCAGAGGAGTGTGTTCTGGGGACCTCTGGGTGGTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 72 bp CCAGGCTACCCCAGAATTCTGCCCAAGAAGAGGGCATaGATTTACCCACCAGGTCCTCATCCGGCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: PGYPRILPKKRA*IYPPGPHPASG
Trigger: ACCTGAGGCCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGGCAGAATTCTGGGGTAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 72 bp GAGGGGCTGGAAGGCTATACTACAGACACACACCCCTaGAGGATAATTCTAGCTGGAGGCCGCAGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: EGLEGYTTDTHP*RIILAGGRSRV
Trigger: CACCCTGCTGCGGCCTCCAGCTAGAATTATCCTGCAGGGGTGTGTGTCTGTAGTATAGCCTTCCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp GGGTTGGTTTCCTCTGAGGCCCCCTTAGTTTGTCGATaGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTG +
Preference number: 3 (lower is better)
Translates to: GLVSSEAPLVCR*LFPLPLLGLHV
Trigger: CACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAAACTAAGGGGGCCTCAGAGGAAACCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR CCA 72 bp TCTGAGCTGTTCACGGGGCATTCCCTCCCCAGCACCTaGAACCCGCTGGCTTCTCATGACTTTCGGGATAAG +
Preference number: 3 (lower is better)
Translates to: SELFTGHSLPST*NPLASHDFRDK
Trigger: CTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAGGGAATGCCCCGTGAACAGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp TCCACCGGCGTGATCCAGGGGTGTCTGAGAGCCTCTTaGATTGTGAGCCGTTTCCGGGTCTCTTTAACCAGA +
Preference number: 3 (lower is better)
Translates to: STGVIQGCLRAS*IVSRFRVSLTR
Trigger: TCTGGTTAAAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACACCCCTGGATCACGCCGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp CTCAGGTGCACCTTCTTCATCAGCGAGCGGGTGAGGTaGTTGCACAGGGACACGATGCTGAAGGAAAGCTTC +
Preference number: 3 (lower is better)
Translates to: LRCTFFISERVR*LHRDTMLKESF
Trigger: GAAGCTTTCCTTCAGCATCGTGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGAAGAAGGTGCACCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CCA 72 bp TTGTGGCTGCCATATAATCAAGGCCACTTGGCTGGGTaGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTA +
Preference number: 3 (lower is better)
Translates to: LWLPYNQGHLAG*SVAAGSPELSL
Trigger: TAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCACCCAGCCAAGTGGCCTTGATTATATGGCAGCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp GAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTaGGCTGTTCACGGGGCATTCCCTCCCCAGCACCTG +
Preference number: 3 (lower is better)
Translates to: EAFLSCPKPLPV*AVHGAFPPQHL
Trigger: CAGGTGCTGGGGAGGGAATGCCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTTGGGCCCATCTCTCTaGCAAAGTGCTCAGGACGCC +
Preference number: 3 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVLGPSL*QSAQDA
Trigger: GGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAA...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR-3UTR CAA 90 bp TTAGTTTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTAGAAGGTCTGAGGTGTaGGTCAGCCTGACGTCCTGG +
Preference number: 3 (lower is better)
Translates to: LVCRWLFPLPLLGLHVVFRRSEV*VSLTSW
Trigger: CCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT...AAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAAACTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CAA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAAAAAGGAACCTCCTGTaGAGGACCTTCTGGCCTTTA +
Preference number: 3 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRKRNLL*RTFWPL
Trigger: TAAAGGCCAGAAGGTCCTCAACAGGAGGTTCCTTTT...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp CTGTTGGGAAACTTCTCTCTCCCTGGTTGGCTTAGCTaGCCTCCGTTCCAGTGTCACTGCTTCAGGACGCTT +
Preference number: 3 (lower is better)
Translates to: LLGNFSLPGWLS*PPFQCHCFRTL
Trigger: AAGCGTCCTGAAGCAGTGACACTGGAACGGAGGTCAGCTAAGCCAACCAGGGAGAGAGAAGTTTCCCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp GAGACAGGGATGGGTAGGGACAATGACTTTGCCTTCTaGGACAGAGCTCCTGGGACAATCATCTGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: ETGMGRDNDFAF*DRAPGTIICRC
Trigger: ACACCTGCAGATGATTGTCCCAGGAGCTCTGTCCCAGAAGGCAAAGTCATTGTCCCTACCCATCCCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp GGCATCTCCCAGATGATGGTATCATATTCTTACTGTTaGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGAT +
Preference number: 3 (lower is better)
Translates to: GISQMMVSYSYC*PGQKAGAPGED
Trigger: ATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAACAGTAAGAATATGATACCATCATCTGGGAGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTACCAGGGTCTCCTGGCTaGCCTGCAAGCTCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVPGSPG*PASSSE
Trigger: TTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGG...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR-3UTR CAA 90 bp TTAGTTTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCTGAAGTTCTCCAGATaGACCACAGACTCCCTGCGC +
Preference number: 3 (lower is better)
Translates to: LVCRWLFPLPLLGLHVVFLKFSR*TTDSLR
Trigger: GCGCAGGGAGTCTGTGGTCAATCTGGAGAACTTCAG...AAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAAACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp GAACCCCCTCAGCCTGTGAAGAAGGCTGCCTTAGTCTaGCCTTCACCCCGTGATGATGAGGATGTCCTTTAT +
Preference number: 3 (lower is better)
Translates to: EPPQPVKKAALV*PSPRDDEDVLY
Trigger: ATAAAGGACATCCTCATCATCACGGGGTGAAGGTCAGACTAAGGCAGCCTTCTTCACAGGCTGAGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR TCA 72 bp CTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGTTCTaGACCCCCTCAGCCTGTGAAGAAGGCTGCCTTAGT +
Preference number: 3 (lower is better)
Translates to: LSLWCNFWPGWF*TPSACEEGCLS
Trigger: ACTAAGGCAGCCTTCTTCACAGGCTGAGGGGGTTCAGAACCAGCCTGGCCAAAAATTACACCAGAGAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR TCA 72 bp CAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATaGACACAAGCTGCAGCTCTATCTCTCTGTGATTCT +
Preference number: 3 (lower is better)
Translates to: QAPAVLCASLPA*TQAAALSLCDS
Trigger: AGAATCACAGAGAGATAGAGCTGCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp AGCTGCCTTCCCCAAGGGCCAGCTTGCCAGCTTCCTTaGGAATTGTTATTCAGGGCGATGTCATACACTCAC +
Preference number: 3 (lower is better)
Translates to: SCLPQGPACQLP*ELLFRAMSYTH
Trigger: GTGAGTGTATGACATCGCCCTGAATAACAATTCTCAAGGAAGCTGGCAAGCTGGCCCTTGGGGAAGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp GATCTTATAATCCTTGGGGAGGGGTGCTCAAAGCTTTaGGTCATGAAACGACCATGTGGCCTTGCGCTTCCC +
Preference number: 3 (lower is better)
Translates to: DLIILGEGCSKL*VMKRPCGLALP
Trigger: GGGAAGCGCAAGGCCACATGGTCGTTTCATGACCCAAAGCTTTGAGCACCCCTCCCCAAGGATTATAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp TGTTGCCCCATCAGTGGCTTCCTCTCCTTAGAAACCTaGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCA +
Preference number: 3 (lower is better)
Translates to: CCPISGFLSLET*LCEGQGLLTRP
Trigger: TGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGTTTCTAAGGAGAGGAAGCCACTGATGGGGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGCAGAATACATGAAGTaGCTTACTTTACCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRAEYMK*LTLPLG
Trigger: TCCCAGAGGTAAAGTAAGCAACTTCATGTATTCTGC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGAATTGTTTTAACAGCTaGGCTGCCCTGCCAGAGCCC +
Preference number: 3 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGNCFNS*AALPEP
Trigger: GGGCTCTGGCAGGGCAGCCAAGCTGTTAAAACAATT...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGATTCTCGACACAGAGTaGGGGCCGTTAGCCAGAAGA +
Preference number: 3 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGILDTE*GPLARR
Trigger: TCTTCTGGCTAACGGCCCCAACTCTGTGTCGAGAAT...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGGGGGTGCTCAAAGCTTaGGGTCATGAAACGACCATG +
Preference number: 3 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGGVLKA*GHETTM
Trigger: CATGGTCGTTTCATGACCCAAAGCTTTGAGCACCCC...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGCATCTGGAAGTTGGTaGGTGCCTAAGTATAATTTA +
Preference number: 3 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRASGSW*VPKYNL
Trigger: TAAATTATACTTAGGCACCAACCAACTTCCAGATGC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp AGTGTTTGTTCAACGGGACTGGACCCTTTTGCAACGTaGACATGCCCACTGCTGGGTCAGGAATTTCACGGA +
Preference number: 3 (lower is better)
Translates to: SVCSTGLDPFAT*TCPLLGQEFHG
Trigger: TCCGTGAAATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTTGAACAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp TTTGCCTTCTGGGACAGAGCTCCTGGGACAATCATCTaGAGGTGTATGCATTCCACCTACACCTGGCAGAAT +
Preference number: 3 (lower is better)
Translates to: FAFWDRAPGTII*RCMHSTYTWQN
Trigger: ATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTCCCAGGAGCTCTGTCCCAGAAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp GGGGTGCTCAAAGCTTTGGGTCATGAAACGACCATGTaGCCTTGCGCTTCCCCATCTTTATGTTTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: GVLKALGHETTM*PCASPSLCLPF
Trigger: AAAGGGCAAACATAAAGATGGGGAAGCGCAAGGCCACATGGTCGTTTCATGACCCAAAGCTTTGAGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp TTGCCAGCCATCCAGGGCCACCCAGCCTCAGACTGTTaGACATTACACTCTCTGCTTGATGTTCTTTTGGAT +
Preference number: 3 (lower is better)
Translates to: LPAIQGHPASDC*TLHSLLDVLLD
Trigger: ATCCAAAAGAACATCAAGCAGAGAGTGTAATGTCCAACAGTCTGAGGCTGGGTGGCCCTGGATGGCTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp AAAGTAATGGGAGAGATGAATGAAAGAGGACCCGCATaGCTTGATTCCTGCTGGAGCGGGGTCATAGGTCCT +
Preference number: 3 (lower is better)
Translates to: KVMGEMNERGPA*LDSCWSGVIGP
Trigger: AGGACCTATGACCCCGCTCCAGCAGGAATCAAGTCATGCGGGTCCTCTTTCATTCATCTCTCCCATTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp CACAATCAGTGTTTGTTCAACGGGACTGGACCCTTTTaGAACGTGAACATGCCCACTGCTGGGTCAGGAATT +
Preference number: 3 (lower is better)
Translates to: HNQCLFNGTGPF*NVNMPTAGSGI
Trigger: AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTTGAACAAACACTGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp AAAAATGAGCAAAATTACAACATGGCGGGCCAGCAATaGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCC +
Preference number: 3 (lower is better)
Translates to: KNEQNYNMAGQQ*AASEGLRCWSA
Trigger: GGCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
3UTR CCA 72 bp TCCCCCAGAGAAAGGGAGATGAGATCTTATAATCCTTaGGGAGGGGTGCTCAAAGCTTTGGGTCATGAAACG +
Preference number: 3 (lower is better)
Translates to: SPREREMRSYNP*GGVLKALGHET
Trigger: CGTTTCATGACCCAAAGCTTTGAGCACCCCTCCCCAAGGATTATAAGATCTCATCTCCCTTTCTCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATAAACGACCATGTGGCCTaGCGCTTCCCCATCTTTATG +
Preference number: 3 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLINDHVA*RFPIFM
Trigger: CATAAAGATGGGGAAGCGCAAGGCCACATGGTCGTT...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp CAAGCCAGTGGAAGGAGGCAGAAACATTCCTTTCCTTaGTTGGCCTGGTCTCACATTTCTGAGTTAGGTCTT +
Preference number: 3 (lower is better)
Translates to: QASGRRQKHSFP*LAWSHISELGL
Trigger: AAGACCTAACTCAGAAATGTGAGACCAGGCCAAGCAAGGAAAGGAATGTTTCTGCCTCCTTCCACTGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGGGCCATGAAGACACTTaGAACTATACAAGTTATGCC +
Preference number: 3 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGGHEDT*NYTSYA
Trigger: GGCATAACTTGTATAGTTCAAAGTGTCTTCATGGCC...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp CCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTaGTCCCCCTTTCTGCATGGTGGCTCTATTTCTCAT +
Preference number: 3 (lower is better)
Translates to: PFSVKVEMHGFP*SPFLHGGSISH
Trigger: ATGAGAAATAGAGCCACCATGCAGAAAGGGGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp GCCACCCAGCCTCAGACTGTTGGACATTACACTCTCTaGTTGATGTTCTTTTGGATCACACTGATAGTGCAA +
Preference number: 3 (lower is better)
Translates to: ATQPQTVGHYTL*LMFFWITLIVQ
Trigger: TTGCACTATCAGTGTGATCCAAAAGAACATCAAGCAGAGAGTGTAATGTCCAACAGTCTGAGGCTGGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp TCTATTTTGACCTTCACTAAAAAGCTTGCCCTGTGTTaGCCCATCAGTGGCTTCCTCTCCTTAGAAACCTGG +
Preference number: 3 (lower is better)
Translates to: SILTFTKKLALC*PISGFLSLETW
Trigger: CCAGGTTTCTAAGGAGAGGAAGCCACTGATGGGGCAACACAGGGCAAGCTTTTTAGTGAAGGTCAAAATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp AGGTGTATGCATTCCACCTACACCTGGCAGAATACATaGAGTTGCTTACTTTACCTCTGGGACCTGGACTTT +
Preference number: 3 (lower is better)
Translates to: RCMHSTYTWQNT*SCLLYLWDLDF
Trigger: AAAGTCCAGGTCCCAGAGGTAAAGTAAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp CAATGGCCTAGGTACATAAGAAAAGGAACCTCCTGTTaGGGACCTTCTGGCCTTTATTCTCGACACAGAGTT +
Preference number: 3 (lower is better)
Translates to: QWPRYIRKGTSC*GPSGLYSRHRV
Trigger: AACTCTGTGTCGAGAATAAAGGCCAGAAGGTCCTCAACAGGAGGTTCCTTTTCTTATGTACCTAGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp CTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGTaGCTGGACATGAGCATAGAGAGGACGATGTCACTG +
Preference number: 3 (lower is better)
Translates to: LFTTRLSEKQLQ*LDMSIERTMSL
Trigger: CAGTGACATCGTCCTCTCTATGCTCATGTCCAGTCACTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp CTGGCTGAAGAATTCCTCATCAAAGTCGTAACTCACTaGTGTGATATTTGCCAGTGTTTCCTGCTTCGTGTC +
Preference number: 3 (lower is better)
Translates to: LAEEFLIKVVTH*CDICQCFLLRV
Trigger: GACACGAAGCAGGAAACACTGGCAAATATCACAGCAGTGAGTTACGACTTTGATGAGGAATTCTTCAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR-3UTR CAA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATACATTTAGTGTCAAGGTaGAGATGCATGGGTTTCCTT +
Preference number: 3 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIHLVSR*RCMGFL
Trigger: AAGGAAACCCATGCATCTCAACCTTGACACTAAATG...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp CGCTTACTGAGCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCCAAAGTCAATCAGCTaGATGTGTGGAATGGGAATA +
Preference number: 3 (lower is better)
Translates to: RLLSTYMPGFKNMSLLAWPKSIS*MCGMGI
Trigger: TATTCCCATTCCACACATCAAGCTGATTGACTTTGG...CCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGCTCAGTAAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp AAGATAGGGATGTTTTGTGAGGCCATGAAGACACTTTaGACTATACAAGTTATGCCCCTACCCACAAGCTTC +
Preference number: 3 (lower is better)
Translates to: KIGMFCEAMKTL*TIQVMPLPTSF
Trigger: GAAGCTTGTGGGTAGGGGCATAACTTGTATAGTTCAAAGTGTCTTCATGGCCTCACAAAACATCCCTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp TATCCCCAGAGTCAAGCCGGGCATCTGGAAGTTGGTTaGTGCCTAAGTATAATTTATAAATGGATGGATGAA +
Preference number: 3 (lower is better)
Translates to: YPQSQAGHLEVG*CLSIIYKWMDE
Trigger: TTCATCCATCCATTTATAAATTATACTTAGGCACCAACCAACTTCCAGATGCCCGGCTTGACTCTGGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATGCTTCTGCAAACCTCTaGGGATGCATCACTGACTGG +
Preference number: 3 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYASANL*GCITDW
Trigger: CCAGTCAGTGATGCATCCCAAGAGGTTTGCAGAAGC...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp GGGACCCAACATTTTTCCACTTCTAGGATGAACCTTTaGGCTGATGGTGCTTGCTATTTGAGTAAAAAGAGT +
Preference number: 3 (lower is better)
Translates to: GTQHFSTSRMNL*ADGACYLSKKS
Trigger: ACTCTTTTTACTCAAATAGCAAGCACCATCAGCTCAAAGGTTCATCCTAGAAGTGGAAAAATGTTGGGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR GCA 72 bp AGAGCAACAGACTTGTCATTAGAAGGTCTCTACTTTTaGCATAATGATGTGACCTTGGGAAAATCCCATCCT +
Preference number: 3 (lower is better)
Translates to: RATDLSLEGLYF*HNDVTLGKSHP
Trigger: AGGATGGGATTTTCCCAAGGTCACATCATTATGGCAAAAGTAGAGACCTTCTAATGACAAGTCTGTTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp AGGTCTGTTAACACGGCCAAAGGGACATTTAATATTTaGAGTGTCTCAGCACCAAACAAGTATACAACTTCC +
Preference number: 3 (lower is better)
Translates to: RSVNTAKGTFNI*SVSAPNKYTTS
Trigger: GGAAGTTGTATACTTGTTTGGTGCTGAGACACTGCAAATATTAAATGTCCCTTTGGCCGTGTTAACAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR-3UTR CAA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGCTGCTTGATGTTCTTTaGGATCACACTGATAGTGCA +
Preference number: 3 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQLLDVL*DHTDSA
Trigger: TGCACTATCAGTGTGATCCAAAAGAACATCAAGCAG...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp AGGACACCAATTATATTGCATCGGGGCCCATATCAGTaGGCTCATTTTAATTTAAGTGCCTTTCTAAAGACC +
Preference number: 3 (lower is better)
Translates to: RTPIILHRGPYQ*AHFNLSAFLKT
Trigger: GGTCTTTAGAAAGGCACTTAAATTAAAATGAGCTCACTGATATGGGCCCCGATGCAATATAATTGGTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
3UTR TCA 72 bp CTTCTATTTCGTGAGCCAGACCAAAGTCAATCAGCTTaGTGTGTGGAATGGGAATATTCTTGTCTAACAACA +
Preference number: 3 (lower is better)
Translates to: LLFREPDQSQSA*CVEWEYSCLTT
Trigger: TGTTGTTAGACAAGAATATTCCCATTCCACACATCAAGCTGATTGACTTTGGTCTGGCTCACGAAATAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR TCA 72 bp AGAGATGGGCATCCTGGGTTTCTGTTTCATCTGTACTaGTTGACTATATCATTTTCCCTCTCTGAGTCAATT +
Preference number: 3 (lower is better)
Translates to: RDGHPGFLFHLY*LTISFSLSESI
Trigger: AATTGACTCAGAGAGGGAAAATGATATAGTCAATCAGTACAGATGAAACAGAAACCCAGGATGCCCATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp TTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTaGGAAACAGTTACAGTGACTGGACATGAGCATAGA +
Preference number: 3 (lower is better)
Translates to: LYRKRSVYDTSK*ETVTVTGHEHR
Trigger: TCTATGCTCATGTCCAGTCACTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR GCA 72 bp TTTAAGGACCAAGTGAGGTCATTTGTCAGACATGAGTaGTTGGTAAGTGAAAAATCAATGCAAACGAAAGGC +
Preference number: 3 (lower is better)
Translates to: FKDQVRSFVRHE*LVSEKSMQTKG
Trigger: GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGACCTCACTTGGTCCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp ACTGTTGGACATTACACTCTCTGCTTGATGTTCTTTTaGATCACACTGATAGTGCAAATTCAGAAAGCAAAC +
Preference number: 3 (lower is better)
Translates to: TVGHYTLCLMFF*ITLIVQIQKAN
Trigger: GTTTGCTTTCTGAATTTGCACTATCAGTGTGATCCAAAAGAACATCAAGCAGAGAGTGTAATGTCCAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CCA 72 bp CATTTGAACCAATTCTCTGGGGTAAGATGTAGGAAATaGAGCTTTTGCCATCTTTCATTGGTTCCAAGATAT +
Preference number: 3 (lower is better)
Translates to: HLNQFSGVRCRK*SFCHLSLVPRY
Trigger: ATATCTTGGAACCAATGAAAGATGGCAAAAGCTCCATTTCCTACATCTTACCCCAGAGAATTGGTTCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp CAATCAGAATTCCTCTCTCCTTTGATTTCTAGGAGATaGGGAAGCTCTATTTTATCACTCACCATAGCTTTT +
Preference number: 3 (lower is better)
Translates to: QSEFLSPLISRR*GSSILSLTIAF
Trigger: AAAAGCTATGGTGAGTGATAAAATAGAGCTTCCTCATCTCCTAGAAATCAAAGGAGAGAGGAATTCTGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR TCA 72 bp CAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTaGGATATGAACAAATCCTTCATCACAAATCAATTC +
Preference number: 3 (lower is better)
Translates to: QDLQSIRYVGRK*DMNKSFITNQF
Trigger: GAATTGATTTGTGATGAAGGATTTGTTCATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTAGAAGGGAGCCCCGCTaGGCCCAGACCTCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ARRRQAHCRPARTVQEDLRREPR*AQTSLA
Trigger: CGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCT...AAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTCAGCAGCGGCCCCTCTaGAGGCCCACCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SKEEAGPLQACADGSGGPQQRPL*RPTRKG
Trigger: TCCTTTCCTGGTGGGCCTTCAGAGGGGCCGCTGCTG...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCATCAGCGAGCGGGTaGGGTGGTTGCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: SKEEAGPLQACADGSGGPSSASG*GGCTGT
Trigger: TGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGA...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp AGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTGTGGCCAGGCTGGTTCTaGACCCCCTCAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: RRRQAHCRPARTVQEDLLWPGWF*TPSACE
Trigger: TTCACAGGCTGAGGGGGTTCAGAACCAGCCTGGCCA...CAGAAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp GCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCAGGAGGCAGGCCCACTaGAGGCCTGCGCGGACGGTT +
Preference number: 4 (lower is better)
Translates to: AKCSGRPGAGAELGPKVCRRQAH*RPARTV
Trigger: AACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCT...GCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp GCGCACCATGGCTTGCTGGTTGTCCACCGGCGTGATCCAGGGGTGTCTGAGAGCCCAGGAGGCAGAGGTTaGGGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: AHHGLLVVHRRDPGVSESPGGRG*GEPRSR
Trigger: GCGCGATCTCGGCTCACCGCAACCTCTGCCTCCTGG...GCTCTCAGACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp GCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCGCACCATGGCTTGCTaGTTGTCCACCGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: ARRRQAHCRPARTVQEDLRTMAC*LSTGVI
Trigger: GATCACGCCGGTGGACAACCAGCAAGCCATGGTGCG...AAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCGGGCCCAGACCTCCCTaGCGGCCACTGCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCGPRPP*RPLQVR
Trigger: CCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCC...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTAGGGAAGAGGAGGACTaGGCCAGCAGAACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARRRQAHCRPARTVQEDLREEED*ASRTGW
Trigger: CCAGCCAGTTCTGCTGGCCCAGTCCTCCTCTTCCCT...AAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTCTCCTCCTCACTCAGTaGCTCCTTCTGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SKEEAGPLQACADGSGGPLLLTQ*LLLGQE
Trigger: TTCCTGGCCCAGAAGGAGTCACTGAGTGAGGAGGAG...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTACAGGGACACGATGCTaGAGGAAAGCTTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SKEEAGPLQACADGSGGPTGTRC*RKASTA
Trigger: GGCGGTGGAAGCTTTCCTTCAGCATCGTGTCCCTGT...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCAGAAGGGAGCCCCGCTaGGCCCAGACCTCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVRREPR*AQTSLA
Trigger: CGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCT...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp GGATGGGAGATCCTCCAGGAGTTCATGCTGCTGCATCAGTGGTCCCCTCCCGGCCCCGGGTGCTGGTGCTaGGCTGGGTCCAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GWEILQEFMLLHQWSPPGPGCWC*AGSKSL
Trigger: CAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGG...GCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp AGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTGAGGGTTGGTTTCCTCTaGGGCCCCCTTAGTTTGTCG +
Preference number: 4 (lower is better)
Translates to: RRRQAHCRPARTVQEDLLRVGFL*GPLSLS
Trigger: CGACAAACTAAGGGGGCCTCAGAGGAAACCAACCCT...CAGAAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp ACCTTCCTGTTAGGGAAGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGAAGGCCAGTTAGGAGGTaGTGCTCCTCCTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: TFLLGKQGGGRPTAGLRGRPVRR*CSSSVG
Trigger: ACCCACGGAGGAGGAGCAGCACCTCCTAACTGGCCT...TCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCTTCCCTAACAGGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp CCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGGGAGCCCCGCTACTCCCTGCGCACCATaGCTTGCTGGTTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: PGAGAELGPKVCTEGSPATPCAP*LAGCPP
Trigger: CGGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGT...AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCGAGGGCGGTCACTGGTaGGGACGGCGTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCEGGHW*GRRPWE
Trigger: TTCCCAGGGACGCCGTCCCCACCAGTGACCGCCCTC...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCCACCTTCTGCTGCTTaGATGGCTCCATGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: ARRRQAHCRPARTVQEDLPPSAA*MAPCLD
Trigger: GTCCAAACATGGAGCCATTCAAGCAGCAGAAGGTGG...AAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp GACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACCGGCGTGATCCAGGGGTGTCTCCTCCTCACTCAGTaGCTCCTTCTGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DSLRTMACWLSTGVIQGCLLLTQ*LLLGQE
Trigger: TTCCTGGCCCAGAAGGAGTCACTGAGTGAGGAGGAG...ACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTACCCCATCCAGGATCTaGTTAATGAAGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKEEAGPLQACADGSGGPTPSRI*LMKLVA
Trigger: GGCCACCAGCTTCATTAAGCAGATCCTGGATGGGGT...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCGGCCCACTGCAGGCCTaGGCGGACGGTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCGPLQA*ADGSGG
Trigger: TCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCC...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp GCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTCAGCCACCCAAAGTaGTGGGACTATAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: ARRRQAHCRPARTVQEDLLSHPK*WDYRHE
Trigger: TTCGTGCCTATAGTCCCAGCACTTTGGGTGGCTGAG...AAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCAGGACCCCTCCCCGCTaGCCTTCCCTCAATGGAGTT +
Preference number: 4 (lower is better)
Translates to: PVKARALSHPLLSCPGPLRTPPR*PSLNGV
Trigger: AACTCCATTGAGGGAAGGGCAGCGGGGAGGGGTCCT...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GAATTCTGCCCAAGAAGAGGGCATGCATTTACCCACCAGGTCCTCATCCGGCCTAGAAGGGAGCCCCGCTaGGCCCAGACCTCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: EFCPRRGHAFTHQVLIRPRREPR*AQTSLA
Trigger: CGCCAGGGAGGTCTGGGCCCAGCGGGGCTCCCTTCT...AGGCCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGGCAGAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCGGACGGGACTTCAGCTaGCCAGGACACAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PVKARALSHPLLSCPGPLGRDFS*PGHRGR
Trigger: CCTTCCTCTGTGTCCTGGCCAGCTGAAGTCCCGTCC...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCGATAAGCAGGTCCTGTaGCTGCATCCCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PVKARALSHPLLSCPGPLDKQVL*LHPTGP
Trigger: GGGGCCTGTGGGATGCAGCCACAGGACCTGCTTATC...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCACACTAGCTCAAGGATaGGCACCACGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PVKARALSHPLLSCPGPLTLAQG*APRRCG
Trigger: ACCGCACCGACGTGGTGCTCATCCTTGAGCTAGTGT...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAATGGCCAGGCTGGTTCTaGACCCCCTCAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTEWPGWF*TPSACE
Trigger: TTCACAGGCTGAGGGGGTTCAGAACCAGCCTGGCCA...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp GCGCACCATGGCTTGCTGGTTGTCCACCGGCGTGATCCAGGGGTGTCTGAGAGCCTGCTTCAGAAGGTCTaGGGTGTTGGTCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: AHHGLLVVHRRDPGVSESLLQKV*GVGQPD
Trigger: GTCAGGCTGACCAACACCTCAGACCTTCTGAAGCAG...GCTCTCAGACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp GCCCAGGCTGGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCCACCCACCTGCCTTGTaGGGGGAAAGGGAACTCACC +
Preference number: 4 (lower is better)
Translates to: AQAGLQLLSSSNSPASDCHPPAL*GERELT
Trigger: GGTGAGTTCCCTTTCCCCTCACAAGGCAGGTGGGTG...GCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAGCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAACTGGGCAACCTGGGTTaGTTCACCTGGACCACGGGA +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTELGNLG*FTWTTG
Trigger: TCCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAG...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGCCTCCCGAGTGTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRASRVS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGACACTCGGGAGGC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAACGGCTCGCCCGGCTCTaGCGCTTCTTGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTERLARL*RFLMNL
Trigger: CAAGTTCATCAAGAAGCGGCAGAGCCGGGCGAGCCG...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp TGGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTAGAGAGACTGGAGGATGGGCGGCTCGCCCGGCTCTaGCGCTTCTTGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: WSVAAGSPELSLERLEDGRLARL*RFLMNL
Trigger: CAAGTTCATCAAGAAGCGGCAGAGCCGGGCGAGCCG...CCCATCCTCCAGTCTCTCTAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp CCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGGGAGCCCCGCTTCATCCGGCCTCAGGTaGACCTTCTTCATCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PGAGAELGPKVCTEGSPASSGLR*TFFISE
Trigger: CTCGCTGATGAAGAAGGTGCACCTGAGGCCGGATGA...AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCCCAGTTAGGAGGTGCTaGTCCTCCTCCGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCPVRRC*SSSVGG
Trigger: TCCACCCACGGAGGAGGAGCAGCACCTCCTAACTGG...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAACCAGTTAGGAGGTGCTaGTCCTCCTCCGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTEPVRRC*SSSVGG
Trigger: TCCACCCACGGAGGAGGAGCAGCACCTCCTAACTGG...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGATGGGGACGGCGTCCCTaGGAAGGCCTCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRWGRRP*EGLSSL
Trigger: CAGAGAAGAGAGGCCTTCCCAGGGACGCCGTCCCCA...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp CTCCAGATTGACCACAGACTCCCTGCGCACCATGGCTaGCTGGTTGTCCACCGGCGTGATCCAGGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LQIDHRLPAHHG*LVVHRRDPGVS
Trigger: AGACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCCTCCTCCTCACTCAGTaGCTCCTTCTGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPLLLTQ*LLLGQE
Trigger: TTCCTGGCCCAGAAGGAGTCACTGAGTGAGGAGGAG...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCACAGGGACACGATGCTaGAGGAAAGCTTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPTGTRC*RKASTA
Trigger: GGCGGTGGAAGCTTTCCTTCAGCATCGTGTCCCTGT...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCTCATCAGCGAGCGGGTaGGGTGGTTGCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVSSASG*GGCTGT
Trigger: TGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGA...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCTGGCCAGGCTGGTTCTaGACCCCCTCAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSWPGWF*TPSACE
Trigger: TTCACAGGCTGAGGGGGTTCAGAACCAGCCTGGCCA...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp ACCTTCCTGTTAGGGAAGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGATTCAGGAGGACCTTCTaGGATTCTGCCCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: TFLLGKQGGGRPTAGLRGFRRTF*DSAHSA
Trigger: TGCTGAGTGGGCAGAATCTCAGAAGGTCCTCCTGAA...TCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCTTCCCTAACAGGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTTTGCCAGTGTTTCCTaGTTCGTGTCTCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SKEEAGPLQACADGSGGPFASVS*FVSPRK
Trigger: TTTCCTGGGAGACACGAAGCAGGAAACACTGGCAAA...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAATGGGCCCATCTCTCTTaGAAAGTGCTCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTEWAHLS*KVLRTP
Trigger: GGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCA...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGGGCCCATCTCTCTTaGAAAGTGCTCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCWAHLS*KVLRTP
Trigger: GGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCA...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGGGCCAGCAATGGGCTaGTTCAGAAGGTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTEGPAMG*FRRSEV
Trigger: CACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCC...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCGGCCCACTGCAGGCCTaGGCGGACGGTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPGPLQA*ADGSGG
Trigger: TCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCC...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCGGAGGGCTTTCCTCCTaGCGATGTCCTCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: AQAGLQLLSSSNSPASDCGGLSS*RCPPQC
Trigger: ACACTGAGGAGGACATCGCCAGGAGGAAAGCCCTCC...GCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCGGAGGGCTTTCCTCCTaGCGATGTCCTCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCGGLSS*RCPPQC
Trigger: ACACTGAGGAGGACATCGCCAGGAGGAAAGCCCTCC...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp TGGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTAGAGAGACTGGAGGATGGGGGAGGGCTTTCCTCCTaGCGATGTCCTCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: WSVAAGSPELSLERLEDGGGLSS*RCPPQC
Trigger: ACACTGAGGAGGACATCGCCAGGAGGAAAGCCCTCC...CCCATCCTCCAGTCTCTCTAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGCTGCTCCTCCTCCGTaGGTGGAGGGCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWEAAPPP*VEGFPP
Trigger: AGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGC...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGGGGCCCAGACCTCCCTaGCGGCCACTGCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVGPRPP*RPLQVR
Trigger: CCTGACCTGCAGTGGCCGCCAGGGAGGTCTGGGCCC...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCACAGGGAGTAAACTTCTaGAGCCTGGCGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSQGVNF*SLAQPG
Trigger: CCCTGGCTGCGCCAGGCTCCAGAAGTTTACTCCCTG...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAGAGGAGGGCGGTCACTaGTGGGGACGGCGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPEEGGH*WGRRPW
Trigger: CCAGGGACGCCGTCCCCACCAGTGACCGCCCTCCTC...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCACACTAGCTCAAGGATaGGCACCACGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSTLAQG*APRRCG
Trigger: ACCGCACCGACGTGGTGCTCATCCTTGAGCTAGTGT...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000457488.5
CDS-3UTR TCA 90 bp TTCTCCAGATTGACCACAGACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACCTCATCAGCGAGCGGGTaGGGTGGTTGCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: FSRLTTDSLRTMACWLSTSSASG*GGCTGT
Trigger: TGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGA...GGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp GCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCCTGGTCTCCAACTCCTaGGTTCAAGCAATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AKCSGRPGAGAELGPKVCLVSNS*VQAIPL
Trigger: CAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAG...GCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCGAACTCACCCATCCCTaGGCTCCAGGCTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCELTHP*APGYPR
Trigger: TCTGGGGTAGCCTGGAGCTCAGGGATGGGTGAGTTC...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCAGGCAGAGGTTGGAGTaGGCCGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCRQRLE*AEIMPL
Trigger: CAGTGGCATGATCTCGGCTCACTCCAACCTCTGCCT...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCAGCCCCTTACTCCAGTaGAAGCCAGGGCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCSPLLQ*KPGHSH
Trigger: GTGAGAGTGCCCTGGCTTTCACTGGAGTAAGGGGCT...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTCATCCGGCCTCAGGTaGACCTTCTTCATCAGCGAG +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCSSGLR*TFFISE
Trigger: CTCGCTGATGAAGAAGGTGCACCTGAGGCCGGATGA...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCGACCTTCTGAGATTCTaGCCACTCAGCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCDLLRF*PLSTPL
Trigger: CAGTGGGGTGCTGAGTGGGCAGAATCTCAGAAGGTC...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTAGGAGGCAGGCCCACTaGAGGCCTGCGCGGACGGTT +
Preference number: 4 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCRRQAH*RPARTV
Trigger: AACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCT...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAATCTGGGCTTAAGCAATaGTGTCACCTCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTESGLKQ*CHLSPW
Trigger: CCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAGA...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCGTGTACTCTCTCAGGTaGTTGGTCTTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PVKARALSHPLLSCPGPLVYSLR*LVFSWV
Trigger: CACCCAGCTGAAGACCAAGCACCTGAGAGAGTACAC...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCACCAGTTTCCTGGCCATaGTTCCGAGGCTACATCCCG +
Preference number: 4 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSPVSWP*FRGYIP
Trigger: CGGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGG...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TGGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTAGAGAGACTGGAGGATGGGTCCTCCAGGAGTTCATaGTGCTGCATCAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: WSVAAGSPELSLERLEDGSSRSS*CCISGP
Trigger: GGGACCACTGATGCAGCAGCATGAACTCCTGGAGGA...CCCATCCTCCAGTCTCTCTAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCTCCATCCCTTCACTaGCAGGCTCCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPAPSLH*QAPTAA
Trigger: TGCAGCTGTGGGAGCCTGGCAGTGAAGGGATGGAGC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCTGTCTGAGAGCCTCTTaGATTGTGAGCCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: AKCSGRPGAGAELGPKVCCLRAS*IVSRFR
Trigger: CCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACA...GCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGAGCGAGCGGGTGAGGTaGTTGCACAGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWESERVR*LHRDTM
Trigger: CATCGTGTCCCTGTGCAACCACCTCACCCGCTCGCT...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGTGCTGGTGCTGAGCTaGGTCCAAAAGTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTEVLVLS*VQKSAQ
Trigger: CTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCAC...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCGAGGTAGAGGGAGCATaGGCATACTCGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCEVEGA*AYSSLA
Trigger: TGCCAGAGACGAGTATGCCCATGCTCCCTCTACCTC...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp TGGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTAGAGAGACTGGAGGATGGGGAGGTAGAGGGAGCATaGGCATACTCGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: WSVAAGSPELSLERLEDGEVEGA*AYSSLA
Trigger: TGCCAGAGACGAGTATGCCCATGCTCCCTCTACCTC...CCCATCCTCCAGTCTCTCTAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCTGTCCTGGTAGAATGTaGAGCCCAGGCCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASCPGRM*SPGPQS
Trigger: GCTCTGAGGGCCTGGGCTCCACATTCTACCAGGACA...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCGAGCCTCTTGGATTGTaGGCCGTTTCCGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVEPLGL*AVSGSL
Trigger: AAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTC...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp TTCTCCAGATTGACCACAGACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACCAGGTGTTGGTCAGCCTaGCGTCCTGGCTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: FSRLTTDSLRTMACWLSTRCWSA*RPGFHG
Trigger: ACCATGGAAGCCAGGACGTCAGGCTGACCAACACCT...GGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp GCCCAGGCTGGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCCTGGGTGGGTTCTCTTaGACTGGACACCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: AQAGLQLLSSSNSPASDCLGGFS*TGHLPV
Trigger: AACAGGAAGGTGTCCAGTTCAAGAGAACCCACCCAG...GCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAGCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCGGCAGGAGAATCTCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCGRRIS*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGAGATTCTCCTGCC...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGACTGGAGGATGGGTGTaGGCCACAAGGTACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWETGGWV*ATRYSP
Trigger: TGGGGAGTACCTTGTGGCTCACACCCATCCTCCAGT...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAGCCCAGGATGGTGTTTaGACAGAGCACAGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSAQDGV*TEHRSR
Trigger: TCGGCTTCTGTGCTCTGTTCAAACACCATCCTGGGC...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCCATCACCCCACCTTCTaGCACACAGTCAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCHHPTF*HTVRQC
Trigger: GCATTGCCTGACTGTGTGTCAGAAGGTGGGGTGATG...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCGACCCTTTTGCAACGTaGACATGCCCACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASDPFAT*TCPLLG
Trigger: ACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTC...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGACTTCGCTGGATGTTTTaGTGGCTGAAGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRLRWMF*WLKPGL
Trigger: GAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAG...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGGGAGCCCCGCTTCCTCCACCTTCTGCTaGTTGAATGGCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: PGAGAELGPKVCTEGSPASSTFC*LNGSMF
Trigger: AAACATGGAGCCATTCAAGCAGCAGAAGGTGGAGGA...AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCCATACTCAAGCCCCGTaGTCTTCTCCCGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVHTQAP*SSPGTS
Trigger: AGAAGTGCCGGGAGAAGAGCACGGGGCTTGAGTATG...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCCGCCTGCGGACATACTaGTTCCTGAAGTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPRLRTY*FLKFSR
Trigger: TCTGGAGAACTTCAGGAAGCAGTATGTCCGCAGGCG...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCTCCCCTGCCTCGGACTaGCAAAGCGCAGGGATTATA +
Preference number: 4 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVSPASD*QSAGII
Trigger: TATAATCCCTGCGCTTTGGCAGTCCGAGGCAGGGGA...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCACAAGGTACTCCCCATaGTTGACAGCCACCATCCCA +
Preference number: 4 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPTRYSP*LTATIP
Trigger: TGGGATGGTGGCTGTCAAGCATGGGGAGTACCTTGT...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCCGAGGCCAGACCAACTaGTTGGAGGAAGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSRGQTN*LEEGKQ
Trigger: CTGCTTTCCTTCCTCCAAGCAGTTGGTCTGGCCTCG...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGTGATCTTGGCTCACTaGAACCTCCGCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRVILAH*NLRLPG
Trigger: ACCTGGAAGGCGGAGGTTGCAGTGAGCCAAGATCAC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCTTCACGATGGCAAACTaGCCACTCCCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASFTMAN*PLPSSS
Trigger: AGAGGAGCTGGGGAGTGGCCAGTTTGCCATCGTGAA...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GAATTCTGCCCAAGAAGAGGGCATGCATTTACCCACCAGGTCCTCATCCGGCCTGCTCCCAGGGTCTCCTaGCTTGCCTGCAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EFCPRRGHAFTHQVLIRPAPRVS*LACKLF
Trigger: GAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGC...AGGCCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGGCAGAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCACCACTCCCAGTCTCTaGGTGGGTTCTCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPTTPSL*VGSLEL
Trigger: CAGTTCAAGAGAACCCACCCAGAGACTGGGAGTGGT...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCATGGTCTTCAGCTGGGTaGGCTCTGTCTTCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSWSSAG*ALSSAV
Trigger: AACAGCGGAAGACAGAGCCCACCCAGCTGAAGACCA...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCACCACATCGTCCTGGATaGTATCGTGGGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPPHRPG*YRGPPP
Trigger: TGGTGGAGGCCCACGATACCATCCAGGACGATGTGG...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGCACCTCAGCAATTCTaGATTCTGTGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRAPQQF*ILWRGW
Trigger: CCAGCCCCTCCACAGAATCCAGAATTGCTGAGGTGC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCCTCCTGCTTGCAGGCTaGTCTTCAGACAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCLLLAG*SSDRDR
Trigger: CCTGTCTCTGTCTGAAGACCAGCCTGCAAGCAGGAG...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp GTCCACCGGCGTGATCCAGGGGTGTCTGAGAGCCTCTaGGATTGTGAGCCGTTTCCGGGTCTCTTTAACCAG +
Preference number: 4 (lower is better)
Translates to: VHRRDPGVSESL*DCEPFPGLFNQ
Trigger: CTGGTTAAAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACACCCCTGGATCACGCCGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CAA 72 bp CGCCTGCGGACATACTGCTTCCTGAAGTTCTCCAGATaGACCACAGACTCCCTGCGCACCATGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLRTYCFLKFSR*TTDSLRTMACW
Trigger: CCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAACTTCAGGAAGCAGTATGTCCGCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGAGCCTCTTGGATTGTaGGCCGTTTCCGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPEPLGL*AVSGSL
Trigger: AAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGCCCGGGTGCTGGTGCTaGGCTGGGTCCAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWPGCWC*AGSKSL
Trigger: CAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGG...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCCTGGTCTCCAACTCCTaGGTTCAAGCAATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVLVSNS*VQAIPL
Trigger: CAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAG...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCCAGTGCATGATCTGCTaGGCAGCTCTGACAGGGATT +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCQCMIC*AALTGI
Trigger: AATCCCTGTCAGAGCTGCTCAGCAGATCATGCACTG...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GAATTCTGCCCAAGAAGAGGGCATGCATTTACCCACCAGGTCCTCATCCGGCCTCGCAGGAGAATCGCTTaGAGCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: EFCPRRGHAFTHQVLIRPRRRIA*SQEAEV
Trigger: AACCTCTGCCTCCTGGCTTCAAGCGATTCTCCTGCG...AGGCCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGGCAGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAAGTGGTGGGGACATGTaGGGATGGAATGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRSGGDM*GWNGNP
Trigger: TGGATTCCCATTCCATCCTCACATGTCCCCACCACT...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCAAGTCCTCCACCTTCTaGTGCTTGAATGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCKSSTF*CLNGSM
Trigger: CATGGAGCCATTCAAGCAGCAGAAGGTGGAGGACTT...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGCTGCGCACCATGGCTTaGTGGTTGTCCACCGGCGTG +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWLRTMA*WLSTGV
Trigger: CACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAG...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp GGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCCAAAGCGCATCATCCGGCCTCAGGTaGACCTTCTTCATCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GLQLLSSSNSPASDCQSASSGLR*TFFISE
Trigger: CTCGCTGATGAAGAAGGTGCACCTGAGGCCGGATGA...TGCGCTTTGGCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAGGCCAGTTAGGAGGTaGTGCTCCTCCTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPRPVRR*CSSSVG
Trigger: ACCCACGGAGGAGGAGCAGCACCTCCTAACTGGCCT...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCGCCTGTGAAGAAGGCTaGCTTAGTCTGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSACEEG*LSLTFT
Trigger: GGTGAAGGTCAGACTAAGGCAGCCTTCTTCACAGGC...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp TCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGCCTGTGAAGAAGGCTaGCTTAGTCTGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: SLAKCSGRPGAGAELGPKACEEG*LSLTFT
Trigger: GGTGAAGGTCAGACTAAGGCAGCCTTCTTCACAGGC...TTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCACAGACACACACCCCTaGAGGATAATTCTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PVKARALSHPLLSCPGPLTDTHP*RIILAG
Trigger: TCCAGCTAGAATTATCCTGCAGGGGTGTGTGTCTGT...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACCCGAGATCATGCCACTaGACTCCAGCCTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHPRSCH*TPAWAA
Trigger: TGCCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGG...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCACTGGAAGATGGAGGTTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPLEDGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAACCTCCATCTTCCAG...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCCTCAGTGACTCCTTCTaGGCCAGGAAATCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSLSDSF*ARKSKS
Trigger: GCTCTTCGATTTCCTGGCCCAGAAGGAGTCACTGAG...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CTGGGCTTAAGCAATGCTGTCACCTCAGCCCCTGGAGTAGCTGGGATGCCAGGTTGTCTGAGAGCCTCTTaGATTGTGAGCCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LGLSNAVTSAPGVAGMPGCLRAS*IVSRFR
Trigger: CCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACA...ACCTGGCATCCCAGCTACTCCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAGCGAGCGGGTGAGGTaGTTGCACAGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPSERVR*LHRDTM
Trigger: CATCGTGTCCCTGTGCAACCACCTCACCCGCTCGCT...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGCTGCTCCTCCTCCGTaGGTGGAGGGCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VHFPQSPCSQWGGLCLSGAAPPP*VEGFPP
Trigger: AGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGC...ACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCGTGCTGGTGCTGAGCTaGGTCCAAAAGTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCVLVLS*VQKSAQ
Trigger: CTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCAC...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGATGGTCCAGTTTCCTaGCCATGCTTCCGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPDGPVS*PCFRGY
Trigger: GTAGCCTCGGAAGCATGGCCAGGAAACTGGACCATC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGGGCCACTTGGCTGGGTaGTCTGTGGCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVGHLAG*SVAAGS
Trigger: AGACCCAGCAGCCACAGACCACCCAGCCAAGTGGCC...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCATAATCAAGGCCACTTaGCTGGGTGGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSIIKAT*LGGLWL
Trigger: CAGCCACAGACCACCCAGCCAAGTGGCCTTGATTAT...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCACAGGATAATTCTAGCTaGAGGCCGCAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPQDNSS*RPQQGG
Trigger: TCCACCCTGCTGCGGCCTCCAGCTAGAATTATCCTG...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCCAGGTTCCAATGCCATaGAAGGACGGGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCQVPMP*KDGTSA
Trigger: AGCTGAAGTCCCGTCCTTCCATGGCATTGGAACCTG...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTGACACAGCTTGGGAGTaGAGGAGGGCGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIDTAWE*RRAVTG
Trigger: ACCAGTGACCGCCCTCCTCCACTCCCAAGCTGTGTC...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTTCAAGGGACACAGCTTaGGAGTGGAGGAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGISRDTA*EWRRAV
Trigger: GACCGCCCTCCTCCACTCCCAAGCTGTGTCCCTTGA...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCGTAATGGGACACTGTTaGGAGTGGTGGGGACATGTG +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASVMGHC*EWWGHV
Trigger: CACATGTCCCCACCACTCCCAACAGTGTCCCATTAC...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp AGGTGCACCTTCTTCATCAGCGAGCGGGTGAGGTGGTaGCACAGGGACACGATGCTGAAGGAAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RCTFFISERVRW*HRDTMLKESFH
Trigger: GTGGAAGCTTTCCTTCAGCATCGTGTCCCTGTGCAACCACCTCACCCGCTCGCTGATGAAGAAGGTGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCGTTTGGACTCCTCATTaGGGCCTGGAACATACAATC +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCVWTPH*GLEHTI
Trigger: GATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAAC...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTCTCCTCCTCACTCAGTaGCTCCTTCTGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGILLLTQ*LLLGQE
Trigger: TTCCTGGCCCAGAAGGAGTCACTGAGTGAGGAGGAG...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCGCTCGCTCGTCTGGCTaGAGAATTCCTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASARSSG*RIPHQS
Trigger: ACTTTGATGAGGAATTCTTCAGCCAGACGAGCGAGC...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCACCCGGGTGCTGGTGCTaGGCTGGGTCCAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPPGCWC*AGSKSL
Trigger: CAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGG...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGAAGGCTGCCTTAGTCTaGCCTTCACCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWEKAALV*PSPRDD
Trigger: ATCATCACGGGGTGAAGGTCAGACTAAGGCAGCCTT...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGAGGTGTTGGTCAGCCTaGCGTCCTGGCTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWRCWSA*RPGFHG
Trigger: ACCATGGAAGCCAGGACGTCAGGCTGACCAACACCT...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp TTCTCCAGATTGACCACAGACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACCCTGGGTGGGTTCTCTTaGACTGGACACCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FSRLTTDSLRTMACWLSTLGGFS*TGHLPV
Trigger: AACAGGAAGGTGTCCAGTTCAAGAGAACCCACCCAG...GGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGGCTGCCCCCTACAGTaGACAAGCCAGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHGCPLQ*TSQWKE
Trigger: CTCCTTCCACTGGCTTGTTCACTGTAGGGGGCAGCC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCACGGCTCGCCCGGCTCTaGCGCTTCTTGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPRLARL*RFLMNL
Trigger: CAAGTTCATCAAGAAGCGGCAGAGCCGGGCGAGCCG...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAATTTGCCAGTGTTTCCTaGTTCGTGTCTCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTEFASVS*FVSPRK
Trigger: TTTCCTGGGAGACACGAAGCAGGAAACACTGGCAAA...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGAGCTGGGATGCCAGGTaGCTACCCCTACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWSWDAR*LPLHLA
Trigger: AGCCAGGTGTAGGGGTAGGCACCTGGCATCCCAGCT...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTAGCTGGGATGCCAGGTaGCTACCCCTACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCSWDAR*LPLHLA
Trigger: AGCCAGGTGTAGGGGTAGGCACCTGGCATCCCAGCT...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACAGCTGGGACAGGTCATaGCGGGCGCTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHSWDRS*RALSFS
Trigger: GGAGAATGAGAGCGCCCGGCATGACCTGTCCCAGCT...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGAGGAGTTCATGCTGCTaGATCAGTGGTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWRSSCC*ISGPLP
Trigger: CGGGAGGGGACCACTGATGCAGCAGCATGAACTCCT...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp GCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCAGTTCCCTTTGTGGCTaGCATATAATCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: AKCSGRPGAGAELGPKVCSSLCG*HIIKAT
Trigger: AGTGGCCTTGATTATATGGCAGCCACAAAGGGAACT...GCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCCCAGGAATGGGGCTGTaGTGGGCAACCTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPPGMGL*WATWVD
Trigger: ATCAACCCAGGTTGCCCAGCACAGCCCCATTCCTGG...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGGCAGGCCCCTGCAGTaGTATGTGCTTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHGRPLQ*YVLLSQ
Trigger: CTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCGTGTCAAGGTTGAGATaGATGGGTTTCCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASVSRLR*MGFLAP
Trigger: GGGAGCAAGGAAACCCATGCATCTCAACCTTGACAC...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGACTCCCTGCGCACCATaGCTTGCTGGTTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWTPCAP*LAGCPP
Trigger: CGGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGT...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGAGCGAGCGGGTGAGGTaGTTGCACAGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLSERVR*LHRDTM
Trigger: CATCGTGTCCCTGTGCAACCACCTCACCCGCTCGCT...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTGCTCCCAGGGTCTCCTaGCTTGCCTGCAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCAPRVS*LACKLF
Trigger: GAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGC...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGTGTCACCTCAGCCCCTaGAGTAGCTGGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLCHLSP*SSWDAR
Trigger: CCTGGCATCCCAGCTACTCCAGGGGCTGAGGTGACA...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGACTGACAGGGATTCACTaGTGTCCTGGTAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRLTGIH*CPGRMW
Trigger: CCACATTCTACCAGGACACCAGTGAATCCCTGTCAG...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATATGCTGCTGCATCAGTaGTCCCCTCCCGGCACCACC +
Preference number: 4 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNMLLHQ*SPPGTT
Trigger: GGTGGTGCCGGGAGGGGACCACTGATGCAGCAGCAT...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGGGCAGGTAAGACCTTaGAGAGACTGTAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPGQVRP*RDCRQV
Trigger: GACCTGTCTACAGTCTCTCCAAGGTCTTACCTGCCC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCAGGATTTCTCCATGTTaGCCAGGCTGGTCTCACACT +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCRISPC*PGWSHT
Trigger: AGTGTGAGACCAGCCTGGCCAACATGGAGAAATCCT...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCTCACGGCCAACTAAATaGGTGACTCTCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCSRPTK*VTLSTV
Trigger: CACAGTGCTGAGAGTCACCCATTTAGTTGGCCGTGA...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCCCAAACAGCCCAGGATaGTGTTTGAACAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASPNSPG*CLNRAQ
Trigger: CTGTGCTCTGTTCAAACACCATCCTGGGCTGTTTGG...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGGGAGCCCCGCTCAAAGTCAATCAGCTTaGTGTGTGGAATGGGAATAT +
Preference number: 4 (lower is better)
Translates to: PGAGAELGPKVCTEGSPAQSQSA*CVEWEY
Trigger: ATATTCCCATTCCACACATCAAGCTGATTGACTTTG...AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCCGTAACTCACTGCTGTaGTATTTGCCAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPRNSLL*YLPVFP
Trigger: AGGAAACACTGGCAAATATCACAGCAGTGAGTTACG...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCGAGCCTCTTGGATTGTaGGCCGTTTCCGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPEPLGL*AVSGSL
Trigger: AAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTC...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGACAGGGACACGATGCTaGAGGAAAGCTTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLTGTRC*RKASTA
Trigger: GGCGGTGGAAGCTTTCCTTCAGCATCGTGTCCCTGT...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTATCCCACCCCAGACTCTaGGGATGGCAGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVSHPRL*GWQTEE
Trigger: TTCCTCTGTCTGCCATCCTCAGAGTCTGGGGTGGGA...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp GAATTCTGCCCAAGAAGAGGGCATGCATTTACCCACCAGGTCCTCATCCGGCCTTTCAGGAGGACCTTCTaGGATTCTGCCCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: EFCPRRGHAFTHQVLIRPFRRTF*DSAHSA
Trigger: TGCTGAGTGGGCAGAATCTCAGAAGGTCCTCCTGAA...AGGCCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGGCAGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCTGCTTGAGTGGCATTTaGGAGTGTACTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASCLSGI*ECTLSG
Trigger: ACCTGAGAGAGTACACTCTCAAATGCCACTCAAGCA...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCATGCGGAACTCATACCTaGGCTGGGACAGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPCGTHT*AGTGHA
Trigger: GGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCA...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTTTCCACTTCTAGGATaGACCTTTGAGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCFPLLG*TFELMV
Trigger: CACCATCAGCTCAAAGGTTCATCCTAGAAGTGGAAA...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp GGATGGGAGATCCTCCAGGAGTTCATGCTGCTGCATCAGTGGTCCCCTCCCGGCGTGTTTCCAGGGAAATaGCTTCTGAGCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: GWEILQEFMLLHQWSPPGVFPGK*LLSSIF
Trigger: AAAAATGGAGCTCAGAAGTCATTTCCCTGGAAACAC...GCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAACATTTTTGGATCTCTaGAGTCAGGAGGCATCTCCC +
Preference number: 4 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSTFLDL*SQEASP
Trigger: GGGAGATGCCTCCTGACTTCAGAGATCCAAAAATGT...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCTCCTCCACCTTCTGCTaGTTGAATGGCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASSSTFC*LNGSMF
Trigger: AAACATGGAGCCATTCAAGCAGCAGAAGGTGGAGGA...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCACGGCTCGCCCGGCTCTaGCGCTTCTTGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPRLARL*RFLMNL
Trigger: CAAGTTCATCAAGAAGCGGCAGAGCCGGGCGAGCCG...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCCTGCGCACCATGGCTTaGTGGTTGTCCACCGGCGTG +
Preference number: 4 (lower is better)
Translates to: KMSKITTWRASNGLLQKVLRTMA*WLSTGV
Trigger: CACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAG...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp AGAAATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGCCAGTTAGGAGGTGCTaGTCCTCCTCCGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RNFRETHSAPNSRSGGSEPVRRC*SSSVGG
Trigger: TCCACCCACGGAGGAGGAGCAGCACCTCCTAACTGG...CTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLLGPKV*TEGSPA
Trigger: AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAG...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGATCTCTCTTGCAAAGTaGTCAGGACGCCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWISLAK*SGRPGA
Trigger: AGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGAT...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAGGGCCAGCAATGGGCTaGTTCAGAAGGTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVGPAMG*FRRSEV
Trigger: CACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCC...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGTCCCCTGCCTCGGACTaGCAAAGCGCAGGGATTATA +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWSPASD*QSAGII
Trigger: TATAATCCCTGCGCTTTGGCAGTCCGAGGCAGGGGA...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCATCTCAAACTGGGCTTaGAGATGGTCCAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCISNWA*RWSSFL
Trigger: CAGGAAACTGGACCATCTGCAAGCCCAGTTTGAGAT...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACAATCCACTGCAGGTCTaGGGAGAGCTCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHNPLQV*GELLPQ
Trigger: CTGAGGCAGGAGCTCTCCGCAGACCTGCAGTGGATT...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GAATTCTGCCCAAGAAGAGGGCATGCATTTACCCACCAGGTCCTCATCCGGCCTCCCAAGAAGAGGGCATaGATTTACCCACCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EFCPRRGHAFTHQVLIRPPKKRA*IYPPGP
Trigger: AGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGG...AGGCCGGATGAGGACCTGGTGGGTAAATGCATGCCCTCTTCTTGGGCAGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCGGGTCTCACTGTTGTTaGCTGGGCTGGTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCGSHCC*LGWSLT
Trigger: AGTTAAAGACCAGCCCAGGCAACAACAGTGAGACCC...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGCCGTTCCAGTGTCACTaGTTCAGGACGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKPFQCH*FRTLPP
Trigger: CGGGGGAAGCGTCCTGAAGCAGTGACACTGGAACGG...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCACGCACCATGGCTTGCTaGTTGTCCACCGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPRTMAC*LSTGVI
Trigger: GATCACGCCGGTGGACAACCAGCAAGCCATGGTGCG...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAGTCAGCCTGACGTCCTaGCTTCCATGGTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVVSLTS*LPWFWE
Trigger: CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGAC...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCCAAAGCGCAAGCAAAATTACAACATaGCGGGCCAGCAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQLLSSSNSPASDCQSASKITT*RASNGL
Trigger: CAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCT...TGCGCTTTGGCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp AGAAATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGTGTCACCTCAGCCCCTaGAGTAGCTGGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RNFRETHSAPNSRSGGSECHLSP*SSWDAR
Trigger: CCTGGCATCCCAGCTACTCCAGGGGCTGAGGTGACA...CTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTTCCCCCTCCCACTCCTaGGCCTTCATGTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCSPSHS*AFMWSF
Trigger: GAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGA...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCCTGTCAGTTCCTACATaGCAAACCAGAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCLSVPT*QTRAEA
Trigger: TGCCTCAGCTCTGGTTTGCCATGTAGGAACTGACAG...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCTACAAGCCAGGGAGGTaGGTGGTGAAAGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPYKPGR*VVKASL
Trigger: CAGGCTTGCTTTCACCACCCACCTCCCTGGCTTGTA...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGATGAGACGCCAGGAATaGGGCTGTGCTGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLMRRQE*GCAGQP
Trigger: AGGTTGCCCAGCACAGCCCCATTCCTGGCGTCTCAT...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCCAATTCTGGATTCTGTaGAGGGGCTGGAAGGCTATA +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASQFWIL*RGWKAI
Trigger: TATAGCCTTCCAGCCCCTCCACAGAATCCAGAATTG...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCAGACAGAGACAGGGATaGGTAGGGACAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASRQRQG*VGTMTL
Trigger: CAAAGTCATTGTCCCTACCCATCCCTGTCTCTGTCT...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCGGGTGCTCAAAGCTTTaGGTCATGAAACGACCATGT +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCGCSKL*VMKRPC
Trigger: ACATGGTCGTTTCATGACCCAAAGCTTTGAGCACCC...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp GTTGAGGACCTTCTGGCCTTTATTCTCGACACAGAGTaGGGGCCGTTAGCCAGAAGAGGAGAAAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VEDLLAFILDTE*GPLARRGERVE
Trigger: CTCCACCCTTTCTCCTCTTCTGGCTAACGGCCCCAACTCTGTGTCGAGAATAAAGGCCAGAAGGTCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp AGGCATCTCCCAGATGATGGTATCATATTCTTACTGTaGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RHLPDDGIIFLL*ARTEGRCSGRG
Trigger: TCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAACAGTAAGAATATGATACCATCATCTGGGAGATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp CTGTCACCTCCCCCTGAGCCAGAGCACAATCAGTGTTaGTTCAACGGGACTGGACCCTTTTGCAACGTGAAC +
Preference number: 4 (lower is better)
Translates to: LSPPPEPEHNQC*FNGTGPFCNVN
Trigger: GTTCACGTTGCAAAAGGGTCCAGTCCCGTTGAACAAACACTGATTGTGCTCTGGCTCAGGGGGAGGTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTGGGCTTAAGCAATGCTGTCACCTCAGCCCCTGGAGTAGCTGGGATGCCAGGTCCATCTTCTATTTCGTaGGCCAGACCAAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: LGLSNAVTSAPGVAGMPGPSSIS*ARPKSI
Trigger: GATTGACTTTGGTCTGGCTCACGAAATAGAAGATGG...ACCTGGCATCCCAGCTACTCCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGACGTAACTCACTGCTGTaGTATTTGCCAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRRNSLL*YLPVFP
Trigger: AGGAAACACTGGCAAATATCACAGCAGTGAGTTACG...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGAGCCTCTTGGATTGTaGGCCGTTTCCGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VHFPQSPCSQWGGLCLSGEPLGL*AVSGSL
Trigger: AAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTC...ACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCATCCCACCCCAGACTCTaGGGATGGCAGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPSHPRL*GWQTEE
Trigger: TTCCTCTGTCTGCCATCCTCAGAGTCTGGGGTGGGA...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGCTGCTTCAGAAGGTCTaGGGTGTTGGTCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWLLQKV*GVGQPD
Trigger: GTCAGGCTGACCAACACCTCAGACCTTCTGAAGCAG...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTAGGGTTGGTTTCCTCTaGGGCCCCCTTAGTTTGTCG +
Preference number: 4 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCRVGFL*GPLSLS
Trigger: CGACAAACTAAGGGGGCCTCAGAGGAAACCAACCCT...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCGATGAACCTTTGAGCTaGTGGTGCTTGCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVDEPLS*WCLLFE
Trigger: CTCAAATAGCAAGCACCATCAGCTCAAAGGTTCATC...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAAAAGGAACCTCCTGTTaGGGACCTTCTGGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPKGTSC*GPSGLY
Trigger: ATAAAGGCCAGAAGGTCCTCAACAGGAGGTTCCTTT...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTAAGCCACCATCTTCATaGTCACCTGTAAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIKPPSS*SPVREG
Trigger: CCCCTCCCTTACAGGTGATCATGAAGATGGTGGCTT...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGAATCCTGGCTTTACTaGAGAGGCGACTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHESWLY*RGDSPN
Trigger: GTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGCATACTCAAGCCCCGTaGTCTTCTCCCGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWHTQAP*SSPGTS
Trigger: AGAAGTGCCGGGAGAAGAGCACGGGGCTTGAGTATG...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGTGATGACATTGTGGTaGAGCACCTGCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWVMTLW*STCRRM
Trigger: CATCCTGCGGCAGGTGCTGCACCACAATGTCATCAC...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000457488.5
CDS-3UTR GCA 90 bp ACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCACCCCATCCAGGATCTaGTTAATGAAGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TLFPMGRTLSLWCNFWPGTPSRI*LMKLVA
Trigger: GGCCACCAGCTTCATTAAGCAGATCCTGGATGGGGT...GCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTACCCCATCCAGGATCTaGTTAATGAAGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGITPSRI*LMKLVA
Trigger: GGCCACCAGCTTCATTAAGCAGATCCTGGATGGGGT...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CCCCGTGATGATGAGGATGTCCTTTATATTGTTTTCCTAAGTCCACACTCCCACCTGCGCACCATGGCTTaGTGGTTGTCCACCGGCGTG +
Preference number: 4 (lower is better)
Translates to: PRDDEDVLYIVFLSPHSHLRTMA*WLSTGV
Trigger: CACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAG...GTGGGAGTGTGGACTTAGGAAAACAATATAAAGGACATCCTCATCATCACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAAATCCAGGTGTGAGCTaGCCCCACAAGCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPNPGVS*PHKQGV
Trigger: TACTCCCTGCTTGTGGGGGCAGCTCACACCTGGATT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTGGACGCTTCCCCCGATaGTGTCAGACCCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLGRFPR*CQTLTA
Trigger: TGCCGTCAGGGTCTGACAGCATCGGGGGAAGCGTCC...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAAAGCTTGCCCTGTGTTaGCCCATCAGTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPKLALC*PISGFL
Trigger: GAGGAAGCCACTGATGGGGCAACACAGGGCAAGCTT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTGGGACTGGACCCTTTTaGAACGTGAACATGCCCACT +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIGTGPF*NVNMPT
Trigger: AGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCC...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGTCTTCTTTAGGAACTaGAAGCAGATTGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRVFFRN*KQIAPP
Trigger: TGGAGGTGCAATCTGCTTGCAGTTCCTAAAGAAGAC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTATTCACGATGGCAAACTaGCCACTCCCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVFTMAN*PLPSSS
Trigger: AGAGGAGCTGGGGAGTGGCCAGTTTGCCATCGTGAA...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGCTCAGTGACTCCTTCTaGGCCAGGAAATCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWLSDSF*ARKSKS
Trigger: GCTCTTCGATTTCCTGGCCCAGAAGGAGTCACTGAG...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GCGCACCATGGCTTGCTGGTTGTCCACCGGCGTGATCCAGGGGTGTCTGAGAGCAATCAGCTTGATGTGTaGAATGGGAATATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: AHHGLLVVHRRDPGVSESNQLDV*NGNILV
Trigger: GACAAGAATATTCCCATTCCACACATCAAGCTGATT...GCTCTCAGACACCCCTGGATCACGCCGGTGGACAACCAGCAAGCCATGGTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp GCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCATGGTGGCTGCTGCTCCTCCTCCGTaGGTGGAGGGCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALTCQALRICHYWPGMVAAAPPP*VEGFPP
Trigger: AGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGC...AGCCACCATGCCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp TTAGTTTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTGTGCTGGTGCTGAGCTaGGTCCAAAAGTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LVCRWLFPLPLLGLHVVFVLVLS*VQKSAQ
Trigger: CTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCAC...AAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAAACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCGCTCCCAGGGTCTCCTaGCTTGCCTGCAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KMSKITTWRASNGLLQKVAPRVS*LACKLF
Trigger: GAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGC...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGGAGCTTTGGGAATGCTaGAGCCTCCTCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWELWEC*SLLHRR
Trigger: TCTTCTGTGGAGGAGGCTCCAGCATTCCCAAAGCTC...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAACGTCCTGGCTTCCATaGTTCTGGGAGGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVTSWLP*FWEVTG
Trigger: TCCTGTGACCTCCCAGAACCATGGAAGCCAGGACGT...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGGAGGCATGCTTGAGTaGCATTTGAGAGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPGGMLE*HLRVYS
Trigger: AGAGTACACTCTCAAATGCCACTCAAGCATGCCTCC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGAACTCATACCTGAGCTaGGACAGGTCATGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGNSYLS*DRSCRA
Trigger: CGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTT...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTGAGGCCGCAGCAGGGTaGATGAGAACATGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGEAAAG*MRTCFC
Trigger: GCAGAAGCATGTTCTCATCCACCCTGCTGCGGCCTC...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTGCACCTGGAACCCGCTaGCTTCTCATGACTTTCGGG +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGAPGTR*LLMTFG
Trigger: CCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGC...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGACTCCCCCTTTCTGCATaGTGGCTCTATTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRLPLSA*WLYFSF
Trigger: AAATGAGAAATAGAGCCACCATGCAGAAAGGGGGAG...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCATCCAATCTAGTTGGCTaGGTCCCCATCTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPSNLVG*VPICPR
Trigger: TCTGGGGCAGATGGGGACCCAGCCAACTAGATTGGA...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGTTGATGGCTGAAGCCTaGGCTCTGCTGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKLMAEA*ALLPSP
Trigger: GGGTGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAA...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCATTTGAAAAAGTCCAGTaGGGTGTGCCAGGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPFEKVQ*GVPGQY
Trigger: GTACTGACCTGGCACACCCCACTGGACTTTTTCAAA...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp TTGAGGCCAGAGTCTAAGATTGAGGTGTCAGCAGGGTaGGTTTCCTCTGAGGCCCCCTTAGTTTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: LRPESKIEVSAG*VSSEAPLVCRW
Trigger: CCATCGACAAACTAAGGGGGCCTCAGAGGAAACCAACCCTGCTGACACCTCAATCTTAGACTCTGGCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGACACTAGCTCAAGGATaGGCACCACGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKTLAQG*APRRCG
Trigger: ACCGCACCGACGTGGTGCTCATCCTTGAGCTAGTGT...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000457488.5
CDS-3UTR TCA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCCGTAACTCACTGCTGTaGTATTTGCCAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCRNSLL*YLPVFP
Trigger: AGGAAACACTGGCAAATATCACAGCAGTGAGTTACG...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp CACAGGATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCGCTCGCTCGTCTGGCTaGAGAATTCCTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: HRIGPSHPRFTFLNHPVPARSSG*RIPHQS
Trigger: ACTTTGATGAGGAATTCTTCAGCCAGACGAGCGAGC...GGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGAAGGCTGCCTTAGTCTaGCCTTCACCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVKAALV*PSPRDD
Trigger: ATCATCACGGGGTGAAGGTCAGACTAAGGCAGCCTT...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCCTTTTAAGGACCAAGTaGGGTCATTTGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCLLRTK*GHLSDM
Trigger: CATGTCTGACAAATGACCTCACTTGGTCCTTAAAAG...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCAATGGTTTCATGAGATaGAGCTTTCCTGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASNGFMR*SFPVLS
Trigger: GGACAAGACAGGAAAGCTTCATCTCATGAAACCATT...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCGCCTGGGCGGCAGAGTaGGACTCTGTGCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGAWAAE*DSVRLP
Trigger: GGGGAGCCGCACAGAGTCTCACTCTGCCGCCCAGGC...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATAGGCAATGCTAGGCTGTaGGCACCTGCCTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIGNARL*APASQQ
Trigger: CTGCTGTGAGGCAGGTGCTCACAGCCTAGCATTGCC...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCAGGACCCGCATGACTTaGTTCCTGCTGGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPRTRMT*FLLERG
Trigger: ACCCCGCTCCAGCAGGAATCAAGTCATGCGGGTCCT...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGGTGATGACATTGTGGTaGAGCACCTGCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGVMTLW*STCRRM
Trigger: CATCCTGCGGCAGGTGCTGCACCACAATGTCATCAC...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGACCCCATCCAGGATCTaGTTAATGAAGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLTPSRI*LMKLVA
Trigger: GGCCACCAGCTTCATTAAGCAGATCCTGGATGGGGT...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp GCCCAGGCTGGTCTCCAACTCCTGAGTTCAAGCAATTCCCCTGCCTCGGACTGCAAAGTCGTAACTCACTaGTGTGATATTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AQAGLQLLSSSNSPASDCKVVTH*CDICQC
Trigger: ACACTGGCAAATATCACAGCAGTGAGTTACGACTTT...GCAGTCCGAGGCAGGGGAATTGCTTGAACTCAGGAGTTGGAGACCAGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKLGPKV*TEGSPA
Trigger: AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAG...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTAATCTCTCTTGCAAAGTaGTCAGGACGCCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVISLAK*SGRPGA
Trigger: AGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGAT...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAATCTCTCTTGCAAAGTaGTCAGGACGCCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPISLAK*SGRPGA
Trigger: AGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGAT...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGGCCTGTGAAGAAGGCTaGCTTAGTCTGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVACEEG*LSLTFT
Trigger: GGTGAAGGTCAGACTAAGGCAGCCTTCTTCACAGGC...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGGGGCCAGCAATGGGCTaGTTCAGAAGGTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKGPAMG*FRRSEV
Trigger: CACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCC...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCATCTGGGCTTAAGCAATaGTGTCACCTCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPSGLKQ*CHLSPW
Trigger: CCAGGGGCTGAGGTGACAGCATTGCTTAAGCCCAGA...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTGGGTGGATGAGAACATaGTTCTGCAAACCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIGWMRT*FCKPLG
Trigger: CCCAAGAGGTTTGCAGAAGCATGTTCTCATCCACCC...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAATCCTTGGGGAGGGGTaGTCAAAGCTTTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPILGEG*SKLWVM
Trigger: CATGACCCAAAGCTTTGAGCACCCCTCCCCAAGGAT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAGAACTATACAAGTTATaGCCCTACCCACAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRELYKL*PYPQAS
Trigger: AGAAGCTTGTGGGTAGGGGCATAACTTGTATAGTTC...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTCTTGCTCCCCCTTTCTaGATGGTGGCTCTATTTCTC +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGILAPPF*MVALFL
Trigger: GAGAAATAGAGCCACCATGCAGAAAGGGGGAGCAAG...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTCACGATGGCAAACTaGCCACTCCCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNFTMAN*PLPSSS
Trigger: AGAGGAGCTGGGGAGTGGCCAGTTTGCCATCGTGAA...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCCAACATAATGTTTTCTaGCTTGAGATCAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PVKARALSHPLLSCPGPLQHNVF*LEIKVS
Trigger: GCTCACTTTGATCTCAAGCCAGAAAACATTATGTTG...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTTGTCTGAGAGCCTCTTaGATTGTGAGCCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: VHFPQSPCSQWGGLCLSGCLRAS*IVSRFR
Trigger: CCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACA...ACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp TTCATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATCGCACCATGGCTTGCTaGTTGTCCACCGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: FMWSFLRVLTSPSYKDTNRTMAC*LSTGVI
Trigger: GATCACGCCGGTGGACAACCAGCAAGCCATGGTGCG...ATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp TTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGGAGCTTTGGGAATGCTaGAGCCTCCTCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: FTFLNHPVPNGEDSVSLVELWEC*SLLHRR
Trigger: TCTTCTGTGGAGGAGGCTCCAGCATTCCCAAAGCTC...CACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATACGTCCTGGCTTCCATaGTTCTGGGAGGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNTSWLP*FWEVTG
Trigger: TCCTGTGACCTCCCAGAACCATGGAAGCCAGGACGT...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp AGAAATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGACGTCCTGGCTTCCATaGTTCTGGGAGGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: RNFRETHSAPNSRSGGSETSWLP*FWEVTG
Trigger: TCCTGTGACCTCCCAGAACCATGGAAGCCAGGACGT...CTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGGTCAGCCTGACGTCCTaGCTTCCATGGTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKVSLTS*LPWFWE
Trigger: CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGAC...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGCTCCTCATTGAGGCCTaGAACATACAATCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWLLIEA*NIQSAG
Trigger: TCCCGCCGATTGTATGTTCCAGGCCTCAATGAGGAG...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457488.5
CDS-3UTR CCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGACTCTCTCAGGTGCTTaGTCTTCAGCTGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKTLSGA*SSAGWA
Trigger: AGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTGCCTCCACATCGTCCTaGATGGTATCGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLASTSS*MVSWAS
Trigger: GGAGGCCCACGATACCATCCAGGACGATGTGGAGGC...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACAACTGGGCTTGCAGATaGTCCAGTTTCCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHNWACR*SSFLAM
Trigger: CATGGCCAGGAAACTGGACCATCTGCAAGCCCAGTT...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTACTGGGCCAGCAGAACTaGCTGGAAACAGTGAACACC +
Preference number: 4 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVLGQQN*LETVNT
Trigger: GGTGTTCACTGTTTCCAGCCAGTTCTGCTGGCCCAG...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTACCCACCAGGAAAGGATaGGAGATCCTCCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVPTRKG*EILQEF
Trigger: GAACTCCTGGAGGATCTCCCATCCTTTCCTGGTGGG...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATATCCCTCCCCAGCACCTaGAACCCGCTGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLISLPST*NPLASH
Trigger: ATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAGGGA...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCACCAAATGCCACATGTaGACTGTTTGGATCCTGATT +
Preference number: 4 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASTKCHM*TVWILI
Trigger: AATCAGGATCCAAACAGTCCACATGTGGCATTTGGT...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCCTGCTTCAGAAGGTCTaGGGTGTTGGTCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: KMSKITTWRASNGLLQKVLLQKV*GVGQPD
Trigger: GTCAGGCTGACCAACACCTCAGACCTTCTGAAGCAG...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGATGTTTTGTGAGGCCATaGAGACACTTTGAACTATAC +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRCFVRP*RHFELY
Trigger: GTATAGTTCAAAGTGTCTTCATGGCCTCACAAAACA...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGAAACCACTTCCTGTCTaGGCTGTTCACGGGGCATTC +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKKPLPV*AVHGAF
Trigger: GAATGCCCCGTGAACAGCTCAGACAGGAAGTGGTTT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCATTACACTCTCTGCTTaGTGTTCTTTTGGATCACAC +
Preference number: 4 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCITLSA*CSFGSH
Trigger: GTGTGATCCAAAAGAACATCAAGCAGAGAGTGTAAT...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAAAAGTCGTAACTCACTaGTGTGATATTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SLAKCSGRPGAGAELGPKKVVTH*CDICQC
Trigger: ACACTGGCAAATATCACAGCAGTGAGTTACGACTTT...TTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp ACTACTGCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTCCAGGAGGCAGAGGTTaGGGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: TTASLQEGFKQQQLLTLTPGGRG*GEPRSR
Trigger: GCGCGATCTCGGCTCACCGCAACCTCTGCCTCCTGG...AGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGCAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR GCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAAGCATCAGGTTCCAATaGCATGGAAGGACGGGACTT +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPSIRFQ*HGRTGL
Trigger: AAGTCCCGTCCTTCCATGGCATTGGAACCTGATGCT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTCGTGAACATGCCCACTaGTGGGTCAGGAATTTCACG +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGREHAH*WVRNFT
Trigger: CGTGAAATTCCTGACCCAGCAGTGGGCATGTTCACG...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGAAGTCCAGTGGGGTGTaGCAGGTCAGTACCAACATC +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKKSSGV*QVSTNI
Trigger: GATGTTGGTACTGACCTGGCACACCCCACTGGACTT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGCTCAGTGACTCCTTCTaGGCCAGGAAATCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKLSDSF*ARKSKS
Trigger: GCTCTTCGATTTCCTGGCCCAGAAGGAGTCACTGAG...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAAATCAGCTTGATGTGTaGAATGGGAATATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: CSGRPGAGAELGPKVCTENQLDV*NGNILV
Trigger: GACAAGAATATTCCCATTCCACACATCAAGCTGATT...TTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTAGTTCACAATTTCTaGAGCAACAAATTCCGGCGT +
Preference number: 4 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWEVVHNF*SNKFRR
Trigger: ACGCCGGAATTTGTTGCTCCAGAAATTGTGAACTAC...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CGCTTACTGAGCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGACTCCCTGCGCACCATaGCTTGCTGGTTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: RLLSTYMPGFKNMSLLAWTPCAP*LAGCPP
Trigger: CGGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGT...CCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGCTCAGTAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTTGCTTGGTCTTCAGCTaGGTGGGCTCTGTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLCLVFS*VGSVFR
Trigger: GCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCA...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCCGAGGCTACATCCCGTaGCCTGGATGTCTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPRGYIP*PGCLLA
Trigger: TGCGAGAAGACATCCAGGCCACGGGATGTAGCCTCG...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGGCCAGACCAACTGCTTaGAGGAAGGAAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKARPTA*RKESSR
Trigger: CCTGCTGCTTTCCTTCCTCCAAGCAGTTGGTCTGGC...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTCACAGAGGAAGGTCATaGTCTCCTCTGCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGHRGRS*SPLLSP
Trigger: TGGGGAAAGCAGAGGAGACCATGACCTTCCTCTGTG...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATATCAGCTGAGGGCGTGTaGGGAGCAGAGATAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLISAEGV*GAEISR
Trigger: CCTGCTTATCTCTGCTCCCCACACGCCCTCAGCTGA...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACAAAATTAGCCGGGCATaGTGCTGCGCACCTATAGTC +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHKISRA*CCAPIV
Trigger: GACTATAGGTGCGCAGCACCATGCCCGGCTAATTTT...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp AGATCTTATAATCCTTGGGGAGGGGTGCTCAAAGCTTaGGGTCATGAAACGACCATGTGGCCTTGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RSYNPWGGVLKA*GHETTMWPCAS
Trigger: GGAAGCGCAAGGCCACATGGTCGTTTCATGACCCAAAGCTTTGAGCACCCCTCCCCAAGGATTATAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp CAGCGAAACAGTCCATTCTCACAGCCCTTCCCGCCATaGTTAGCCCTCCACACTGTTGTAAAAAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QRNSPFSQPFPP*LALHTVVKSQL
Trigger: CAGCTGACTTTTTACAACAGTGTGGAGGGCTAACAATGGCGGGAAGGGCTGTGAGAATGGACTGTTTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp GCACAATCAGTGTTTGTTCAACGGGACTGGACCCTTTaGCAACGTGAACATGCCCACTGCTGGGTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: AQSVFVQRDWTL*QREHAHCWVRN
Trigger: ATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTTGAACAAACACTGATTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGCCATCTTCTATTTCGTaGGCCAGACCAAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWPSSIS*ARPKSI
Trigger: GATTGACTTTGGTCTGGCTCACGAAATAGAAGATGG...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGCTCGCTCGTCTGGCTaGAGAATTCCTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPARSSG*RIPHQS
Trigger: ACTTTGATGAGGAATTCTTCAGCCAGACGAGCGAGC...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp GCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACTCCCACCCCAGACTCTaGGGATGGCAGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ASLQEGFKQQQLLTLTEHSHPRL*GWQTEE
Trigger: TTCCTCTGTCTGCCATCCTCAGAGTCTGGGGTGGGA...GTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp TCCCCTTCTTATAAGGACACCAATTATATTGCATCGGGGCCCATATCAGTGAGCACTGGCTGGAAACAGTaGACACCCACCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPSYKDTNYIASGPISVSTGWKQ*TPTCLV
Trigger: CACAAGGCAGGTGGGTGTTCACTGTTTCCAGCCAGT...GCTCACTGATATGGGCCCCGATGCAATATAATTGGTGTCCTTATAAGAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp TTAGTTTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCAGAACACACTCCTCTaGAGATCACACTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LVCRWLFPLPLLGLHVVFQNTLL*RSHFSL
Trigger: AAGGCTGAAGTGTGATCTTCAGAGGAGTGTGTTCTG...AAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAAACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp ACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCATGGTGGCTTAGGTACTCCCCATGCTTaGCAGCCACCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: TYMPGFKNMSLLAWHGGLGTPHA*QPPSHA
Trigger: GGCATGGGATGGTGGCTGTCAAGCATGGGGAGTACC...TAAGCCACCATGCCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTGAAAGCAAACCTGCATaGGTACCACCGGCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLESKPA*VPPAWD
Trigger: GTCCCAAGCCGGTGGTACTCATGCAGGTTTGCTTTC...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTGAGAAACAGTTACAGTaGCTGGACATGAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIEKQLQ*LDMSIE
Trigger: CTCTATGCTCATGTCCAGTCACTGTAACTGTTTCTC...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTTCCTCCACCTTCTGCTaGTTGAATGGCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCSSTFC*LNGSMF
Trigger: AAACATGGAGCCATTCAAGCAGCAGAAGGTGGAGGA...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATACATACTCAAGCCCCGTaGTCTTCTCCCGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIHTQAP*SSPGTS
Trigger: AGAAGTGCCGGGAGAAGAGCACGGGGCTTGAGTATG...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TTCATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATGTGATGACATTGTGGTaGAGCACCTGCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: FMWSFLRVLTSPSYKDTNVMTLW*STCRRM
Trigger: CATCCTGCGGCAGGTGCTGCACCACAATGTCATCAC...ATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261891.7
CDS-3UTR GCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGCGCCTGCGGACATACTaGTTCCTGAAGTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKRLRTY*FLKFSR
Trigger: TCTGGAGAACTTCAGGAAGCAGTATGTCCGCAGGCG...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CGCTTACTGAGCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCTGGGTCCAAAAGTCTaGACAGAAGGGAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: RLLSTYMPGFKNMSLLAWLGPKV*TEGSPA
Trigger: AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAG...CCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGCTCAGTAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp CCCCGTGATGATGAGGATGTCCTTTATATTGTTTTCCTAAGTCCACACTCCCACTCCAGGAGTTCATGCTaGTGCATCAGTGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PRDDEDVLYIVFLSPHSHSRSSC*CISGPL
Trigger: GAGGGGACCACTGATGCAGCAGCATGAACTCCTGGA...GTGGGAGTGTGGACTTAGGAAAACAATATAAAGGACATCCTCATCATCACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTCCTGGGACAATCATCTaGAGGTGTATGCATTCCACC +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGPGTII*RCMHST
Trigger: GGTGGAATGCATACACCTGCAGATGATTGTCCCAGG...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGATGCATGGGTTTCCTTaGTCCCCCTTTCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKMHGFP*SPFLHG
Trigger: ACCATGCAGAAAGGGGGAGCAAGGAAACCCATGCAT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTCCAGGCTCCCACAGCTaGAGAATCATCGATTACCAA +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGPGSHS*RIIDYQ
Trigger: TTGGTAATCGATGATTCTGCAGCTGTGGGAGCCTGG...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTATAGCGTGATGACATTGTaGTGCAGCACCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: MWSFLRVLTSPSYKDTNYSVMTL*CSTCRR
Trigger: CCTGCGGCAGGTGCTGCACCACAATGTCATCACGCT...ATAATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261891.7
CDS-3UTR CCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGCTCAGTGACTCCTTCTaGGCCAGGAAATCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKLSDSF*ARKSKS
Trigger: GCTCTTCGATTTCCTGGCCCAGAAGGAGTCACTGAG...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp TCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAAATCAGCTTGATGTGTaGAATGGGAATATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLAKCSGRPGAGAELGPKNQLDV*NGNILV
Trigger: GACAAGAATATTCCCATTCCACACATCAAGCTGATT...TTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCGAGCTTTGGGAATGCTaGAGCCTCCTCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: KMSKITTWRASNGLLQKVELWEC*SLLHRR
Trigger: TCTTCTGTGGAGGAGGCTCCAGCATTCCCAAAGCTC...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp CTGGCTGAAGAATTCCTCATCAAAGTCGTAACTCACTGCTGTGATATTTGCCAGGTCAGCCTGACGTCCTaGCTTCCATGGTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LAEEFLIKVVTHCCDICQVSLTS*LPWFWE
Trigger: CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGAC...CTGGCAAATATCACAGCAGTGAGTTACGACTTTGATGAGGAATTCTTCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAAGCAAAATTACAACATaGCGGGCCAGCAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPSKITT*RASNGL
Trigger: CAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCT...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACTCCCCCTCCCACTCCTaGGCCTTCATGTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ASLQEGFKQQQLLTLTEHSPSHS*AFMWSF
Trigger: GAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGA...GTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGAGAATATGTCATTATTaGCCTGGCATGGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWERICHY*PGMVAY
Trigger: ATAAGCCACCATGCCAGGCCAATAATGACATATTCT...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGATGCTTGATGTTCTTTTaGATCACACTGATAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRCLMFF*ITLIVQ
Trigger: TTGCACTATCAGTGTGATCCAAAAGAACATCAAGCA...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGACTAGTTGGGTGTGGTaGTGGGTGCCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKTSWVW*WVPVIS
Trigger: TGAGATTACAGGCACCCACCACCACACCCAACTAGT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCGGACACTGTTGGGAGTaGTGGGGACATGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPGHCWE*WGHVRM
Trigger: CATCCTCACATGTCCCCACCACTCCCAACAGTGTCC...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp ATTCTAAAGCAGCTTTTGGGTTATCAGAAATACATTTaGGGTTGTCTGTGGTCAGCCGGCAGCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: ILKQLLGYQKYI*GCLWSAGSSGP
Trigger: GGGGCCGCTGCTGCCGGCTGACCACAGACAACCCAAAATGTATTTCTGATAACCCAAAAGCTGCTTTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
3UTR CAA 72 bp GCCAGTGGAAGGAGGCAGAAACATTCCTTTCCTTGCTaGGCCTGGTCTCACATTTCTGAGTTAGGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ASGRRQKHSFPC*AWSHISELGLD
Trigger: GTCAAGACCTAACTCAGAAATGTGAGACCAGGCCAAGCAAGGAAAGGAATGTTTCTGCCTCCTTCCACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTAGTTTGGACTCCTCATTaGGGCCTGGAACATACAATC +
Preference number: 4 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVVWTPH*GLEHTI
Trigger: GATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAAC...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGTTTGGACTCCTCATTaGGGCCTGGAACATACAATC +
Preference number: 4 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPVWTPH*GLEHTI
Trigger: GATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAAC...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGCCATCTTCTATTTCGTaGGCCAGACCAAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWPSSIS*ARPKSI
Trigger: GATTGACTTTGGTCTGGCTCACGAAATAGAAGATGG...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGGCTCGCTCGTCTGGCTaGAGAATTCCTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKARSSG*RIPHQS
Trigger: ACTTTGATGAGGAATTCTTCAGCCAGACGAGCGAGC...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGCGGGGCCCATATCAGTaGGCTCATTTTAATTTAAGT +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWRGPYQ*AHFNLS
Trigger: ACTTAAATTAAAATGAGCTCACTGATATGGGCCCCG...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp ACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCATGGTGGCTTACGCAGGAGAATCGCTTaGAGCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TYMPGFKNMSLLAWHGGLRRRIA*SQEAEV
Trigger: AACCTCTGCCTCCTGGCTTCAAGCGATTCTCCTGCG...TAAGCCACCATGCCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR TCA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGAGTTTGGAAAGAAACTaGCATTCTTTTTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWSLERN*HSFWLG
Trigger: GCCCAGCCAAAAAGAATGTCAGTTTCTTTCCAAACT...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTCCTCCACCTTCTGCTaGTTGAATGGCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNSSTFC*LNGSMF
Trigger: AAACATGGAGCCATTCAAGCAGCAGAAGGTGGAGGA...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp ATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTATCATACTCAAGCCCCGTaGTCTTCTCCCGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: MWSFLRVLTSPSYKDTNYHTQAP*SSPGTS
Trigger: AGAAGTGCCGGGAGAAGAGCACGGGGCTTGAGTATG...ATAATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR GCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGTTTGCCAGTGTTTCCTaGTTCGTGTCTCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGFASVS*FVSPRK
Trigger: TTTCCTGGGAGACACGAAGCAGGAAACACTGGCAAA...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CCCCGTGATGATGAGGATGTCCTTTATATTGTTTTCCTAAGTCCACACTCCCACCGCCTGCGGACATACTaGTTCCTGAAGTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRDDEDVLYIVFLSPHSHRLRTY*FLKFSR
Trigger: TCTGGAGAACTTCAGGAAGCAGTATGTCCGCAGGCG...GTGGGAGTGTGGACTTAGGAAAACAATATAAAGGACATCCTCATCATCACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGAAGCCCTGCTGCTCCTaGTTGTTCTCCGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKKPCCS*LFSGHF
Trigger: GAAATGACCGGAGAACAAGCAGGAGCAGCAGGGCTT...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATAGCAGGTCCTGTGGCTaGATCCCACAGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYSRSCG*IPQAPG
Trigger: CCCGGGGGCCTGTGGGATGCAGCCACAGGACCTGCT...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTAGCCGACCTTTTATTTaGAGTCTGGGCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLSRPFI*SLGWVQ
Trigger: CTGCACCCAGCCCAGACTGCAAATAAAAGGTCGGCT...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACTCCAGATTTTACTCATaGCTTCCTCAAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHSRFYS*LPQGTQ
Trigger: CTGTGTCCCTTGAGGAAGGCATGAGTAAAATCTGGA...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGATTCCTTATACTTCTGTaGAAGTTTTGGCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRFLILL*KFWQFS
Trigger: GGAAAATTGCCAAAACTTGCACAGAAGTATAAGGAA...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCATGGTGGCTTAATTTTGGGTTGTCTGTaGTCAGCCGGCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TYMPGFKNMSLLAWHGGLILGCL*SAGSSG
Trigger: GCCGCTGCTGCCGGCTGACCACAGACAACCCAAAAT...TAAGCCACCATGCCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CGCTTACTGAGCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCTGTGCTGGGCAACCTaGGTTGATTCACCTGGACCA +
Preference number: 4 (lower is better)
Translates to: RLLSTYMPGFKNMSLLAWLCWAT*VDSPGP
Trigger: TGGTCCAGGTGAATCAACCCAGGTTGCCCAGCACAG...CCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGCTCAGTAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGCTTCTGCAAACCTCTTaGGATGCATCACTGACTGGA +
Preference number: 4 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGLLQTS*DASLTG
Trigger: TCCAGTCAGTGATGCATCCCAAGAGGTTTGCAGAAG...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTCATGAAACGACCATGTaGCCTTGCGCTTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLHETTM*PCASPS
Trigger: AGATGGGGAAGCGCAAGGCCACATGGTCGTTTCATG...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCTCTGTTGACATGAGTTaGTTGACTGTCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPSVDMS*LTVPSP
Trigger: GGGGGAGGGGACAGTCAACCAACTCATGTCAACAGA...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCGTAATTCCAGCACTTTaGAAGGCCGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPVIPAL*KAEVGG
Trigger: TCCACCCACCTCGGCCTTCCAAAGTGCTGGAATTAC...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCCTTTTCCAATCTAGTTaGCTGGGTCCCCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPLFQSS*LGPHLP
Trigger: GGGCAGATGGGGACCCAGCCAACTAGATTGGAAAAG...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCATGGTGGCTTAGCCTGCAAGCTCTTCTaGATTCCTTGGGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: TYMPGFKNMSLLAWHGGLACKLF*IPWAHL
Trigger: GAGATGGGCCCAAGGAATTCAGAAGAGCTTGCAGGC...TAAGCCACCATGCCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTAGGGGAGGTGCAGAATaGAGAATTAACTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLRGGAE*RINWHL
Trigger: GAGGTGCCAGTTAATTCTTCATTCTGCACCTCCCCT...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATACAAAGCTTTGGGTCATaGAACGACCATGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIQSFGS*NDHVAL
Trigger: CAAGGCCACATGGTCGTTTCATGACCCAAAGCTTTG...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCATTTGCCATAATGATGTaGCCTTGGGAAAATCCCATC +
Preference number: 4 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPFAIMM*PWENPI
Trigger: GATGGGATTTTCCCAAGGTCACATCATTATGGCAAA...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACTACGACACGTCTAAGTaGGAAACAGTTACAGTGACT +
Preference number: 4 (lower is better)
Translates to: RHEKGILALLKRRLPQLHYDTSK*ETVTVT
Trigger: AGTCACTGTAACTGTTTCTCACTTAGACGTGTCGTA...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCGCTTGCCAGCTTCCTTaGGAATTGTTATTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPACQLP*ELLFRA
Trigger: CGCCCTGAATAACAATTCTCAAGGAAGCTGGCAAGC...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCGCCACCTGTGCTGCGTaGTGGAGTGAGGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGATCAA*WSEVGS
Trigger: GCTTCCTACCTCACTCCATCACGCAGCACAGGTGGC...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGGCCGCTGCTAAGGCATaGAAAAGGAATCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKAAAKA*KRNPGF
Trigger: AAAGCCAGGATTCCTTTTTCATGCCTTAGCAGCGGC...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTTTGCCAGTGTTTCCTaGTTCGTGTCTCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KMSKITTWRASNGLLQKVFASVS*FVSPRK
Trigger: TTTCCTGGGAGACACGAAGCAGGAAACACTGGCAAA...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp AACGGGACTGGACCCTTTTGCAACGTGAACATGCCCACTGCTGGGTCAGGAATTAAAGTCGTAACTCACTaGTGTGATATTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: NGTGPFCNVNMPTAGSGIKVVTH*CDICQC
Trigger: ACACTGGCAAATATCACAGCAGTGAGTTACGACTTT...AATTCCTGACCCAGCAGTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACCTCAGCCACCCAAAGTaGTGGGACTATAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: ASLQEGFKQQQLLTLTEHLSHPK*WDYRHE
Trigger: TTCGTGCCTATAGTCCCAGCACTTTGGGTGGCTGAG...GTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR GCA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCATTTGTCAGACATGAGTaGTTGGTAAGTGAAAAATCA +
Preference number: 4 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPFVRHE*LVSEKS
Trigger: TGATTTTTCACTTACCAAGCACTCATGTCTGACAAA...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGACGACCATGTGGCCTTaGGCTTCCCCATCTTTATGT +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKTTMWP*ASPSLC
Trigger: ACATAAAGATGGGGAAGCGCAAGGCCACATGGTCGT...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGGGTCATGGTCTCCTCTaGTTTCCCCAAAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKGHGLL*FPQKTW
Trigger: CCAAGTCTTTTGGGGAAAGCAGAGGAGACCATGACC...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTGGCTGAAGAATTCCTCATCAAAGTCGTAACTCACTGCTGTGATATTTGCCAGACCACTCCCAGTCTCTaGGTGGGTTCTCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LAEEFLIKVVTHCCDICQTTPSL*VGSLEL
Trigger: CAGTTCAAGAGAACCCACCCAGAGACTGGGAGTGGT...CTGGCAAATATCACAGCAGTGAGTTACGACTTTGATGAGGAATTCTTCAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp GTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTATCAGAAATACATTTTaGGTTGTCTGTGGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VHFPQSPCSQWGGLCLSGIRNTF*VVCGQP
Trigger: CGGCTGACCACAGACAACCCAAAATGTATTTCTGAT...ACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCAATGACTTTGCCTTCTaGGACAGAGCTCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPNDFAF*DRAPGT
Trigger: TGTCCCAGGAGCTCTGTCCCAGAAGGCAAAGTCATT...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATAGTTTGGACTCCTCATTaGGGCCTGGAACATACAATC +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIVWTPH*GLEHTI
Trigger: GATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAAC...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGCGTAACTCACTGCTGTaGTATTTGCCAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKRNSLL*YLPVFP
Trigger: AGGAAACACTGGCAAATATCACAGCAGTGAGTTACG...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR TCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATCGGGGCCCATATCAGTaGGCTCATTTTAATTTAAGT +
Preference number: 4 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNRGPYQ*AHFNLS
Trigger: ACTTAAATTAAAATGAGCTCACTGATATGGGCCCCG...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR TCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGACCTTCCTATCTCACTaGGTTCTTTTAAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKTFLSH*VLLRTK
Trigger: CTTGGTCCTTAAAAGAACTCAGTGAGATAGGAAGGT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTGCCATGAAGACACTTTaGACTATACAAGTTATGCCC +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGAMKTL*TIQVMP
Trigger: GGGCATAACTTGTATAGTTCAAAGTGTCTTCATGGC...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTAGAAACCTGGCTGTGTaGAGGTCAAGGTCTGTTAAC +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLRNLAV*RSRSVN
Trigger: GTTAACAGACCTTGACCTTCACACAGCCAGGTTTCT...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ACTACTGCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGACCTTCTGAGATTCTaGCCACTCAGCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: TTASLQEGFKQQQLLTLTDLLRF*PLSTPL
Trigger: CAGTGGGGTGCTGAGTGGGCAGAATCTCAGAAGGTC...AGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGCAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR GCA 90 bp GCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACGGGTCTCACTGTTGTTaGCTGGGCTGGTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: ASLQEGFKQQQLLTLTEHGSHCC*LGWSLT
Trigger: AGTTAAAGACCAGCCCAGGCAACAACAGTGAGACCC...GTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR GCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCGCAAACCTCTTGGGATaGATCACTGACTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFANLLG*ITDWIL
Trigger: CAGAATCCAGTCAGTGATGCATCCCAAGAGGTTTGC...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCCTGACGGCAGGCCCCTaGAGTGCTATGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGLTAGP*SAMCFS
Trigger: AGAGAAGCACATAGCACTGCAGGGGCCTGCCGTCAG...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGGACTCCAGCTCTTTCTaGCATTATTCCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKDSSSF*HYSSAP
Trigger: TGGAGCAGAGGAATAATGGCAGAAAGAGCTGGAGTC...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGCTGAAGCCTGGGCTCTaGTGCCTTCACCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQLKPGL*CLHPPV
Trigger: AACAGGTGGGTGAAGGCAGCAGAGCCCAGGCTTCAG...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACTACTGCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTTTCACGATGGCAAACTaGCCACTCCCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TTASLQEGFKQQQLLTLTFTMAN*PLPSSS
Trigger: AGAGGAGCTGGGGAGTGGCCAGTTTGCCATCGTGAA...AGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGCAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATGTAGTTCACAATTTCTaGAGCAACAAATTCCGGCGT +
Preference number: 4 (lower is better)
Translates to: LSSITLFPMGRTLSLWCNVVHNF*SNKFRR
Trigger: ACGCCGGAATTTGTTGCTCCAGAAATTGTGAACTAC...ATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCCTACATCCCGTGGCCTaGATGTCTTCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGLHPVA*MSSRSS
Trigger: GCTGCTGCGAGAAGACATCCAGGCCACGGGATGTAG...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTGGATGCATCACTGACTaGATTCTGGCGATTAGAGCT +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLGCITD*ILAIRA
Trigger: AGCTCTAATCGCCAGAATCCAGTCAGTGATGCATCC...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGCAAAGTCAATCAGCTTaGTGTGTGGAATGGGAATAT +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKQSQSA*CVEWEY
Trigger: ATATTCCCATTCCACACATCAAGCTGATTGACTTTG...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCCCATCTTCTATTTCGTaGGCCAGACCAAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFPSSIS*ARPKSI
Trigger: GATTGACTTTGGTCTGGCTCACGAAATAGAAGATGG...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGCCAGAGAAAGGGAGATaGGATCTTATAATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKPEKGR*DLIILG
Trigger: CCCAAGGATTATAAGATCTCATCTCCCTTTCTCTGG...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGGATAGGGATGTTTTGTaGGGCCATGAAGACACTTTG +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKDRDVL*GHEDTL
Trigger: CAAAGTGTCTTCATGGCCTCACAAAACATCCCTATC...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGAGATGGAGGTTGCAGTaGGCCAAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQRWRLQ*AKIAPL
Trigger: CAATGGCGCGATCTTGGCTCACTGCAACCTCCATCT...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTGGGACATTTAATATTTaGAGTGTCTCAGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGGTFNI*SVSAPN
Trigger: GTTTGGTGCTGAGACACTGCAAATATTAAATGTCCC...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGAGAGGACGATGTCACTaGTATAAGGAAAACCACTTA +
Preference number: 4 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKRGRCH*YKENHL
Trigger: TAAGTGGTTTTCCTTATAGCAGTGACATCGTCCTCT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCAAGCCTGGGCTCTGCTaGCTTCACCCACCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGKPGLC*LHPPVF
Trigger: GAAAACAGGTGGGTGAAGGCAGCAGAGCCCAGGCTT...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCAACATAATGTTTTCTaGCTTGAGATCAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCQHNVF*LEIKVS
Trigger: GCTCACTTTGATCTCAAGCCAGAAAACATTATGTTG...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp AAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGCAACATAATGTTTTCTaGCTTGAGATCAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: KLQHGGPAMGCFRRSEVLQHNVF*LEIKVS
Trigger: GCTCACTTTGATCTCAAGCCAGAAAACATTATGTTG...CAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGCAACATAATGTTTTCTaGCTTGAGATCAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWQHNVF*LEIKVS
Trigger: GCTCACTTTGATCTCAAGCCAGAAAACATTATGTTG...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCGCCTTCAAGGCCCAATaGCCTAGGTACATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPAFKAQ*PRYIRK
Trigger: TTTTCTTATGTACCTAGGCCATTGGGCCTTGAAGGC...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCAGATCTTATAATCCTTaGGGAGGGGTGCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPRSYNP*GGVLKA
Trigger: AGCTTTGAGCACCCCTCCCCAAGGATTATAAGATCT...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp AACCAAATGCCACATGTGGACTGTTTGGATCCTGATTaGAACAAACCAGCTGTAATGGGACACTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: NQMPHVDCLDPD*NKPAVMGHCWE
Trigger: CTCCCAACAGTGTCCCATTACAGCTGGTTTGTTCAAATCAGGATCCAAACAGTCCACATGTGGCATTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp GAGAGACGTAGCAACCAAATGCCACATGTGGACTGTTaGGATCCTGATTTGAACAAACCAGCTGTAATGGGA +
Preference number: 4 (lower is better)
Translates to: ERRSNQMPHVDC*DPDLNKPAVMG
Trigger: TCCCATTACAGCTGGTTTGTTCAAATCAGGATCCAAACAGTCCACATGTGGCATTTGGTTGCTACGTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGCAGCAGCTTCTTCAATaGCTCCACCTTGCGGAACTC +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQQQLLQ*LHLAEL
Trigger: GAGTTCCGCAAGGTGGAGTCATTGAAGAAGCTGCTG...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CGCTTACTGAGCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGTCTAGGATGAACCTTTaGGCTGATGGTGCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: RLLSTYMPGFKNMSLLAWSRMNL*ADGACY
Trigger: ATAGCAAGCACCATCAGCTCAAAGGTTCATCCTAGA...CCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGCTCAGTAAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR TCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATAACCTGGCAGAATACATaGAGTTGCTTACTTTACCTC +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLITWQNT*SCLLYL
Trigger: GAGGTAAAGTAAGCAACTTCATGTATTCTGCCAGGT...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGAAAGTCGTAACTCACTaGTGTGATATTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PQTLRMADRGKPILWRIKKVVTH*CDICQC
Trigger: ACACTGGCAAATATCACAGCAGTGAGTTACGACTTT...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR GCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGTCTGCGGAGAGCTCCTaGCTCAGAATCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQSAESS*LRISNW
Trigger: CCAGTTTGAGATTCTGAGGCAGGAGCTCTCCGCAGA...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCTGCATTGTAAATCCCTaGTTCTGTAGCAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPCIVNP*FCSRKA
Trigger: TGCTTTCCTGCTACAGAAGCAGGGATTTACAATGCA...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTAAACATTCCTTTCCTTaGTTGGCCTGGTCTCACATT +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLKHSFP*LAWSHI
Trigger: AATGTGAGACCAGGCCAAGCAAGGAAAGGAATGTTT...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTGTAGTTCACAATTTCTaGAGCAACAAATTCCGGCGT +
Preference number: 4 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLVVHNF*SNKFRR
Trigger: ACGCCGGAATTTGTTGCTCCAGAAATTGTGAACTAC...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCTGTCTGAGAGCCTCTTaGATTGTGAGCCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGCLRAS*IVSRFR
Trigger: CCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACA...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCCTCCTCATTGAGGCCTaGAACATACAATCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGLLIEA*NIQSAG
Trigger: TCCCGCCGATTGTATGTTCCAGGCCTCAATGAGGAG...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCGAACATGCCCACTGCTaGGTCAGGAATTTCACGGAC +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGEHAHC*VRNFTD
Trigger: GTCCGTGAAATTCCTGACCCAGCAGTGGGCATGTTC...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCGTTGGGAGGCATGCTTaGGTGGCATTTGAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGVGRHA*VAFESV
Trigger: TACACTCTCAAATGCCACTCAAGCATGCCTCCCAAC...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATTCTGCTGAGCAGCTCTaGCAGGGATTCACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYSAEQL*QGFTGV
Trigger: GACACCAGTGAATCCCTGTCAGAGCTGCTCAGCAGA...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCCACAGAGCTCTGGTATaGTGGCTCTGTTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGHRALV*WLCWET
Trigger: AGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTG...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATAGCCTGCATTCTATTTTaGCCTTCACTAAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLIACILF*PSLKSL
Trigger: CAAGCTTTTTAGTGAAGGTCAAAATAGAATGCAGGC...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGGGCAGGAGAATTGCTTaGACCTGGAAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQGRRIA*TWKMEV
Trigger: AACCTCCATCTTCCAGGTTCAAGCAATTCTCCTGCC...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCGAATGGGAATCCAGATaGGATGAAGGAATTATTGCT +
Preference number: 4 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFEWESR*DEGIIA
Trigger: AGCAATAATTCCTTCATCTCATCTGGATTCCCATTC...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCGGACATTACACTCTCTaGTTGATGTTCTTTTGGATC +
Preference number: 4 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFGHYTL*LMFFWI
Trigger: GATCCAAAAGAACATCAAGCAGAGAGTGTAATGTCC...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCAGGAAATGGAGCTTTTaGCATCTTTCATTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFRKWSF*HLSLVP
Trigger: TGGAACCAATGAAAGATGGCAAAAGCTCCATTTCCT...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGCTTAGCAGAGATTTATaGTGGAGAACTTATGAGTTA +
Preference number: 4 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGLSRDL*WRTYEL
Trigger: TAACTCATAAGTTCTCCAGCATAAATCTCTGCTAAG...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGTCACTGACTGGATTCTaGCGATTAGAGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQSLTGF*RLELPA
Trigger: GGCTGGAAGCTCTAATCGCCAGAATCCAGTCAGTGA...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCTCCTCAGCTCTAAATTaGGAATATCGTTTAGTCTGC +
Preference number: 4 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFSSALN*EYRLVC
Trigger: GCAGACTAAACGATATTCCCAATTTAGAGCTGAGGA...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATAGTGTCCTGAGTAGCTaGGACTACAGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYSVLSS*DYRHPP
Trigger: TGGTGGGTGCCTGTAGTCCCAGCTACTCAGGACACT...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp ACCCAGCCTCAGACTGTTGGACATTACACTCTCTGCTaGATGTTCTTTTGGATCACACTGATAGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: TQPQTVGHYTLC*MFFWITLIVQI
Trigger: AATTTGCACTATCAGTGTGATCCAAAAGAACATCAAGCAGAGAGTGTAATGTCCAACAGTCTGAGGCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCCAAAACGCTCGAAGTTaGCATAGGAGTTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGQNARS*HRSCWE
Trigger: CTCCCAACAACTCCTATGTCAACTTCGAGCGTTTTG...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGAATCAGCTTGATGTGTaGAATGGGAATATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKNQLDV*NGNILV
Trigger: GACAAGAATATTCCCATTCCACACATCAAGCTGATT...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTGCTTACTTTACCTCTaGGACCTGGACTTTAATATT +
Preference number: 4 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKCLLYL*DLDFNI
Trigger: AATATTAAAGTCCAGGTCCCAGAGGTAAAGTAAGCA...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCGTAAGATGTAGGAAATaGAGCTTTTGCCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPVRCRK*SFCHLS
Trigger: TGAAAGATGGCAAAAGCTCCATTTCCTACATCTTAC...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGCTCTCCTTAGAAACCTaGCTGTGTGAAGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQLSLET*LCEGQG
Trigger: ACCTTGACCTTCACACAGCCAGGTTTCTAAGGAGAG...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR GCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGAGGCACCCACCACCATaGCCAGCTAATTTTTATATC +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQRHPPP*PANFYI
Trigger: GATATAAAAATTAGCTGGGCATGGTGGTGGGTGCCT...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACTTACATGCCAGGGTAGTTCACAATTTCTaGAGCAACAAATTCCGGCGT +
Preference number: 4 (lower is better)
Translates to: EGFKQQQLLTLTEHLHARVVHNF*SNKFRR
Trigger: ACGCCGGAATTTGTTGCTCCAGAAATTGTGAACTAC...CCTGGCATGTAAGTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CCA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCCATCTGGAAGTTGGTTaGTGCCTAAGTATAATTTAT +
Preference number: 4 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFHLEVG*CLSIIY
Trigger: ATAAATTATACTTAGGCACCAACCAACTTCCAGATG...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp GAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACTTACATGCCAGGAGAATATGTCATTATTaGCCTGGCATGGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: EGFKQQQLLTLTEHLHARRICHY*PGMVAY
Trigger: ATAAGCCACCATGCCAGGCCAATAATGACATATTCT...CCTGGCATGTAAGTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR CCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATCTGTTGAGGACCTTCTaGCCTTTATTCTCGACACAG +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYLLRTF*PLFSTQ
Trigger: CTGTGTCGAGAATAAAGGCCAGAAGGTCCTCAACAG...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATAAAACTAGTTGGGTGTaGTGGTGGGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYKTSWV*WWVPVI
Trigger: GATTACAGGCACCCACCACCACACCCAACTAGTTTT...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATTATGCCATGCTCTGTTaGCATGAGTTGGTTGACTGT +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYYAMLC*HELVDC
Trigger: ACAGTCAACCAACTCATGTCAACAGAGCATGGCATA...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGAGCTCTATCTCTCTGTaGTTCTTGGTCAATGTTCAA +
Preference number: 4 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQSSISL*FLVNVQ
Trigger: TTGAACATTGACCAAGAATCACAGAGAGATAGAGCT...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATTTTGTTCAACGGGACTaGACCCTTTTGCAACGTGAA +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYFVQRD*TLLQRE
Trigger: TTCACGTTGCAAAAGGGTCCAGTCCCGTTGAACAAA...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
3UTR CAA 72 bp GGGAATCCAGATGAGATGAAGGAATTATTGCTGATTTaGTCAAGTGTGATAATGGCATGGGGTTGTATTAAA +
Preference number: 4 (lower is better)
Translates to: GNPDEMKELLLI*SSVIMAWGCIK
Trigger: TTTAATACAACCCCATGCCATTATCACACTTGACAAAATCAGCAATAATTCCTTCATCTCATCTGGATTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR TCA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATTATGTAGGCAGAAAGTaGGATATGAACAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYYVGRK*DMNKSF
Trigger: GAAGGATTTGTTCATATCTCACTTTCTGCCTACATA...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS TCA 90 bp TTTGGACTCCTCATTGAGGCCTGGAACATACAATCGGCGGGAGGCTaGGCTGCCGCGGTCGCGGCCGCGGCAGGCGCGGCGGGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: FGLLIEAWNIQSAGG*AAAVAAAAGAAGAA
Trigger: CGCCGCTCCCGCCGCGCCTGCCGCGGCCGCGACCGCGGCAGCTCAGCCTCCCGCCGATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558482.5
ENST00000561162.5
CDS CCA 90 bp TTGAAGATGGAGACCAGGGCCTCCACATCGTCCTGGATGGTATCGTaGGCCTCCACCAGGGCACGGCATCCCAGGTCGACCCGAGCCACG +
Preference number: 5 (lower is better)
Translates to: LKMETRASTSSWMVS*ASTRARHPRSTRAT
Trigger: CGTGGCTCGGGTCGACCTGGGATGCCGTGCCCTGGTGGAGGCCCACGATACCATCCAGGACGATGTGGAGGCCCTGGTCTCCATCTTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS-3UTR CAA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTAGAAGGTCTGAGGTGTaGGTCAGCCTGACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SKEEAGPLQACADGSGGPRRSEV*VSLTSW
Trigger: CCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS GCA 90 bp TGCCCAGGGTCAGTGTTTAAAGCAAAGGCCTCTCCATGGGCCCTCTaGATCTGGCTGCCCAGGCCAACCCTGGCGACAGAGCAGGGACCC +
Preference number: 5 (lower is better)
Translates to: CPGSVFKAKASPWAL*IWLPRPTLATEQGP
Trigger: GGGTCCCTGCTCTGTCGCCAGGGTTGGCCTGGGCAGCCAGATGCAGAGGGCCCATGGAGAGGCCTTTGCTTTAAACACTGACCCTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS-3UTR CAA 90 bp AGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTTCTGGTGTCTGAGAGCCTCTaGGATTGTGAGCCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: RRRQAHCRPARTVQEDLLVSESL*DCEPFP
Trigger: CGGAAACGGCTCACAATCCAAGAGGCTCTCAGACAC...CAGAAGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CAA 90 bp CCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGGGAGCCCCGCTACCATGGCTTGCTGGTaGTCCACCGGCGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: PGAGAELGPKVCTEGSPATMACW*STGVIQ
Trigger: CTGGATCACGCCGGTGGACAACCAGCAAGCCATGGT...AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp GGATGGGAGATCCTCCAGGAGTTCATGCTGCTGCATCAGTGGTCCCCTCCCGGCGAGGTGTCAGCAGGGTaGGTTTCCTCTGAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GWEILQEFMLLHQWSPPGEVSAG*VSSEAP
Trigger: GGGGGCCTCAGAGGAAACCAACCCTGCTGACACCTC...GCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp AGCAAGGAGGAGGCAGGCCCACTGCAGGCCTGCGCGGACGGTTCAGGAGGACCTGTCAGGGTCTCACTGTaGTTGCCTGGGCTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SKEEAGPLQACADGSGGPVRVSL*LPGLVF
Trigger: AAAGACCAGCCCAGGCAACAACAGTGAGACCCTGAC...AGGTCCTCCTGAACCGTCCGCGCAGGCCTGCAGTGGGCCTGCCTCCTCCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS CCA 90 bp CTGCCCAGGCCAACCCTGGCGACAGAGCAGGGACCCTTTGCCCATTaGAACTCATGGCTGTGCCCTTACCGTGATCCAGGGGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: LPRPTLATEQGPFAH*NSWLCPYRDPGVSE
Trigger: CTCAGACACCCCTGGATCACGGTAAGGGCACAGCCATGAGTTCCAATGGGCAAAGGGTCCCTGCTCTGTCGCCAGGGTTGGCCTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS CCA 90 bp GGGTCAGTGTTTAAAGCAAAGGCCTCTCCATGGGCCCTCTGCATCTaGCTGCCCAGGCCAACCCTGGCGACAGAGCAGGGACCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GSVFKAKASPWALCI*LPRPTLATEQGPFA
Trigger: GGCAAAGGGTCCCTGCTCTGTCGCCAGGGTTGGCCTGGGCAGCCAGATGCAGAGGGCCCATGGAGAGGCCTTTGCTTTAAACACTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS-3UTR CAA 90 bp GCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACCATGGCTTGCTGGTaGTCCACCGGCGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: AKCSGRPGAGAELGPKVCTMACW*STGVIQ
Trigger: CTGGATCACGCCGGTGGACAACCAGCAAGCCATGGT...GCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp GGATGGGAGATCCTCCAGGAGTTCATGCTGCTGCATCAGTGGTCCCCTCCCGGCGCACCTTCAGCCGCCTaGCTGACCAGTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GWEILQEFMLLHQWSPPGAPSAA*LTSVSR
Trigger: CCTGGAAACACTGGTCAGCAAGGCGGCTGAAGGTGC...GCCGGGAGGGGACCACTGATGCAGCAGCATGAACTCCTGGAGGATCTCCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp TGGTCTGTGGCTGCTGGGTCTCCTGAGCTCAGCCTAGAGAGACTGGAGGATGGGGCTGGGCAACCTGGGTaGATTCACCTGGACCACGGG +
Preference number: 5 (lower is better)
Translates to: WSVAAGSPELSLERLEDGAGQPG*IHLDHG
Trigger: CCCGTGGTCCAGGTGAATCAACCCAGGTTGCCCAGC...CCCATCCTCCAGTCTCTCTAGGCTGAGCTCAGGAGACCCAGCAGCCACAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS CCA 90 bp GCTTCCTTCTCATTGAAGATGGAGACCAGGGCCTCCACATCGTCCTaGATGGTATCGTGGGCCTCCACCAGGGCACGGCATCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: ASFSLKMETRASTSS*MVSWASTRARHPRS
Trigger: CGACCTGGGATGCCGTGCCCTGGTGGAGGCCCACGATACCATCCAGGACGATGTGGAGGCCCTGGTCTCCATCTTCAATGAGAAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS-3UTR CAA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCTGCAGCGTGATGACATaGTGGTGCAGCACCTGCCGC +
Preference number: 5 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPCSVMT*WCSTCR
Trigger: GCGGCAGGTGCTGCACCACAATGTCATCACGCTGCA...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000457488.5
CDS-3UTR CAA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAGAGGACCCGCATGACTaGATTCCTGCTGGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSEDPHD*IPAGAG
Trigger: CCCCGCTCCAGCAGGAATCAAGTCATGCGGGTCCTC...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS GCA 90 bp CAGTGTTTAAAGCAAAGGCCTCTCCATGGGCCCTCTGCATCTGGCTaGCCAGGCCAACCCTGGCGACAGAGCAGGGACCCTTTGCCCATT +
Preference number: 5 (lower is better)
Translates to: QCLKQRPLHGPSASG*PGQPWRQSRDPLPI
Trigger: AATGGGCAAAGGGTCCCTGCTCTGTCGCCAGGGTTGGCCTGGGCAGCCAGATGCAGAGGGCCCATGGAGAGGCCTTTGCTTTAAACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS GCA 90 bp CGAATAAGCCCAGGCCCTCTGGGGCCCCTGGCTAGCTTTCATCTGTaGCCAGGGTCAGTGTTTAAAGCAAAGGCCTCTCCATGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RISPGPLGPLASFHL*PGSVFKAKASPWAL
Trigger: GAGGGCCCATGGAGAGGCCTTTGCTTTAAACACTGACCCTGGGCACAGATGAAAGCTAGCCAGGGGCCCCAGAGGGCCTGGGCTTATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS GCA 90 bp AGCAGACCCTGGATGCCGTCTCATGCTCCACACCCATCTCCATCCTaGTCTTCAGCAGCAGCCCGGGGTGTGTTTGGAGTCATCGAGCTC +
Preference number: 5 (lower is better)
Translates to: SRPWMPSHAPHPSPS*SSAAARGVFGVIEL
Trigger: GAGCTCGATGACTCCAAACACACCCCGGGCTGCTGCTGAAGAGCAGGATGGAGATGGGTGTGGAGCATGAGACGGCATCCAGGGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558482.5
CDS CCA 90 bp GTTAGGAGGTGCTGCTCCTCCTCCGTGGGTGGAGGGCTTTCCTCCTaGCGATGTCCTCCTCAGTGTCACTCTCACAGTTCCTCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: VRRCCSSSVGGGLSS*RCPPQCHSHSSSGP
Trigger: AGGACCTGAGGAACTGTGAGAGTGACACTGAGGAGGACATCGCCAGGAGGAAAGCCCTCCACCCACGGAGGAGGAGCAGCACCTCCTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559731.5
CDS CCA 90 bp CCAACCCTGGCGACAGAGCAGGGACCCTTTGCCCATTGGAACTCATaGCTGTGCCCTTACCGTGATCCAGGGGTGTCTGAGAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PTLATEQGPFAHWNS*LCPYRDPGVSESLL
Trigger: CAAGAGGCTCTCAGACACCCCTGGATCACGGTAAGGGCACAGCCATGAGTTCCAATGGGCAAAGGGTCCCTGCTCTGTCGCCAGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS-3UTR CAA 90 bp CAGCTCCCAGGGTCTCCTGGCTTGCCTGCAAGCTCTTCTGAATTCCTTGGGCCCAGAAGGTCTGAGGTGTaGGTCAGCCTGACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QLPGSPGLPASSSEFLGPRRSEV*VSLTSW
Trigger: CCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT...GGGCCCAAGGAATTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp TTGTCGATGGCTATTCCCCCTCCCACTCCTGGGCCTTCATGTGGTCTTTCCTGCGAGGTGTCAGCAGGGTaGGTTTCCTCTGAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LSMAIPPPTPGPSCGLSCEVSAG*VSSEAP
Trigger: GGGGGCCTCAGAGGAAACCAACCCTGCTGACACCTC...GCAGGAAAGACCACATGAAGGCCCAGGAGTGGGAGGGGGAATAGCCATCGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CAA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGACCCTGCTGCTCCTGCTaGTTCTCCGGTCATTTCCGC +
Preference number: 5 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRPCCSC*FSGHFR
Trigger: GCGGAAATGACCGGAGAACAAGCAGGAGCAGCAGGG...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS GCA 90 bp CTCCAGCTGGAAGCTGCCCACCAGCTCCTGAATCCACTGCAGGTCTaGGGAGAGCTCCTGCCTCAGAATCTCAAACTGGGCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: LQLEAAHQLLNPLQV*GELLPQNLKLGLQM
Trigger: CATCTGCAAGCCCAGTTTGAGATTCTGAGGCAGGAGCTCTCCGCAGACCTGCAGTGGATTCAGGAGCTGGTGGGCAGCTTCCAGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp TCTGCGGAGAGCTCCTGCCTCAGAATCTCAAACTGGGCTTGCAGATaGTCCAGTTTCCTGGCCATGCTTCCGAGGCTACATCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: SAESSCLRISNWACR*SSFLAMLPRLHPVA
Trigger: GGCCACGGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGGACCATCTGCAAGCCCAGTTTGAGATTCTGAGGCAGGAGCTCTCCGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp ACACCCATCTCCATCCTGCTCTTCAGCAGCAGCCCGGGGTGTGTTTaGAGTCATCGAGCTCTGAACCCACATGTCAGCCTCCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: TPISILLFSSSPGCV*SHRALNPHVSLQTQ
Trigger: CTGGGTCTGGAGGCTGACATGTGGGTTCAGAGCTCGATGACTCCAAACACACCCCGGGCTGCTGCTGAAGAGCAGGATGGAGATGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558482.5
CDS-3UTR CAA 90 bp ATTCCTTGGGCCCATCTCTCTTGCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCCTGAAGTTCTCCAGATaGACCACAGACTCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: IPWAHLSCKVLRTPGCWCLKFSR*TTDSLR
Trigger: GCGCAGGGAGTCTGTGGTCAATCTGGAGAACTTCAG...GCACCAGCACCCGGGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAAGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp CAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGAGGTGTTGGTCAGCTTGGGCCCATCTCTCTaGCAAAGTGCTCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: QHGGPAMGCFRRSEVLVSLGPSL*QSAQDA
Trigger: GGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAA...GCTGACCAACACCTCAGACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCCGGGACTGGACCCTTTaGCAACGTGAACATGCCCAC +
Preference number: 5 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASRDWTL*QREHAH
Trigger: GTGGGCATGTTCACGTTGCAAAAGGGTCCAGTCCCG...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS TCA 90 bp CTCGCAGCAGCTTCTTCAATGACTCCACCTTGCGGAACTCATACCTaGGCTGGGACAGGTCATGCCGGGCGCTCTCATTCTCCTCTCGGT +
Preference number: 5 (lower is better)
Translates to: LAAASSMTPPCGTHT*AGTGHAGRSHSPLG
Trigger: ACCGAGAGGAGAATGAGAGCGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAAGAAGCTGCTGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS GCA 90 bp TGCAGGTCTGCGGAGAGCTCCTGCCTCAGAATCTCAAACTGGGCTTaGAGATGGTCCAGTTTCCTGGCCATGCTTCCGAGGCTACATCCC +
Preference number: 5 (lower is better)
Translates to: CRSAESSCLRISNWA*RWSSFLAMLPRLHP
Trigger: GGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGGACCATCTGCAAGCCCAGTTTGAGATTCTGAGGCAGGAGCTCTCCGCAGACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS GCA 90 bp CTGGCGACAGAGCAGGGACCCTTTGCCCATTGGAACTCATGGCTGTaGCCTTACCGTGATCCAGGGGTGTCTGAGAGCCTCTTGGATTGT +
Preference number: 5 (lower is better)
Translates to: LATEQGPFAHWNSWL*PYRDPGVSESLLDC
Trigger: ACAATCCAAGAGGCTCTCAGACACCCCTGGATCACGGTAAGGGCACAGCCATGAGTTCCAATGGGCAAAGGGTCCCTGCTCTGTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS CCA 90 bp TGGTCCAGTTTCCTGGCCATGCTTCCGAGGCTACATCCCGTGGCCTaGATGTCTTCTCGCAGCAGCTTCTTCAATGACTCCACCTTGCGG +
Preference number: 5 (lower is better)
Translates to: WSSFLAMLPRLHPVA*MSSRSSFFNDSTLR
Trigger: CCGCAAGGTGGAGTCATTGAAGAAGCTGCTGCGAGAAGACATCCAGGCCACGGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp TCTTCACGATGGCAAACTGGCCACAAAGCCAGGTGGGCAGTGCGCTaGGAACTAGATGGGCATGACAGGAGTGAGAAACACGCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSRWQTGHKARWAVR*ELDGHDRSEKHAGS
Trigger: GCTCCCTGCGTGTTTCTCACTCCTGTCATGCCCATCTAGTTCCCAGCGCACTGCCCACCTGGCTTTGTGGCCAGTTTGCCATCGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561162.5
CDS-3UTR CAA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTACCTGCGCACCATGGCTaGCTGGTTGTCCACCGGCGT +
Preference number: 5 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVPAHHG*LVVHRR
Trigger: ACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGG...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCCTGCGCACCATGGCTaGCTGGTTGTCCACCGGCGT +
Preference number: 5 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCPAHHG*LVVHRR
Trigger: ACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGG...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp AGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTCCTGAAGTTCTCCAGATaGACCACAGACTCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: RSEVLVSLTSWLPWFWEVLKFSR*TTDSLR
Trigger: GCGCAGGGAGTCTGTGGTCAATCTGGAGAACTTCAG...GACCTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGGAGCGGGTGAGGTGGTaGCACAGGGACACGATGCTG +
Preference number: 5 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWERVRW*HRDTML
Trigger: CAGCATCGTGTCCCTGTGCAACCACCTCACCCGCTC...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp TTCTCCAGATTGACCACAGACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACCCCAGGGTCTCCTGGCTaGCCTGCAAGCTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: FSRLTTDSLRTMACWLSTPGSPG*PASSSE
Trigger: TTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGG...GGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp TTCTCCAGATTGACCACAGACTCCCTGCGCACCATGGCTTGCTGGTTGTCCACCACGCAGGAGAATCGCTaGAAGCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: FSRLTTDSLRTMACWLSTTQENR*KPGGRG
Trigger: ACCTCTGCCTCCTGGCTTCAAGCGATTCTCCTGCGT...GGTGGACAACCAGCAAGCCATGGTGCGCAGGGAGTCTGTGGTCAATCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCAAAGCTTGCCCTGTGTaGCCCCATCAGTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASKACPV*PHQWLP
Trigger: AGGAAGCCACTGATGGGGCAACACAGGGCAAGCTTT...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS TCA 90 bp GCCGGGCGCTCTCATTCTCCTCTCGGTACCAAGCTTCCTTCTCATTaGAGATGGAGACCAGGGCCTCCACATCGTCCTGGATGGTATCGT +
Preference number: 5 (lower is better)
Translates to: AGRSHSPLGTKLPSH*RWRPGPPHRPGWYR
Trigger: ACGATACCATCCAGGACGATGTGGAGGCCCTGGTCTCCATCTTCAATGAGAAGGAAGCTTGGTACCGAGAGGAGAATGAGAGCGCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp GAGTGGCATTTGAGAGTGTACTCTCTCAGGTGCTTGGTCTTCAGCTaGGTGGGCTCTGTCTTCCGCTGTTCAGGGGCTCTGCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: EWHLRVYSLRCLVFS*VGSVFRCSGALPSP
Trigger: AGGAGAAGGCAGAGCCCCTGAACAGCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTACACTCTCAAATGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp GCAGATGGTCCAGTTTCCTGGCCATGCTTCCGAGGCTACATCCCGTaGCCTGGATGTCTTCTCGCAGCAGCTTCTTCAATGACTCCACCT +
Preference number: 5 (lower is better)
Translates to: ADGPVSWPCFRGYIP*PGCLLAAASSMTPP
Trigger: AGGTGGAGTCATTGAAGAAGCTGCTGCGAGAAGACATCCAGGCCACGGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGGACCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp CCTGCCTCAGAATCTCAAACTGGGCTTGCAGATGGTCCAGTTTCCTaGCCATGCTTCCGAGGCTACATCCCGTGGCCTGGATGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PASESQTGLADGPVS*PCFRGYIPWPGCLL
Trigger: GAGAAGACATCCAGGCCACGGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGGACCATCTGCAAGCCCAGTTTGAGATTCTGAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp ATCCACTGCAGGTCTGCGGAGAGCTCCTGCCTCAGAATCTCAAACTaGGCTTGCAGATGGTCCAGTTTCCTGGCCATGCTTCCGAGGCTA +
Preference number: 5 (lower is better)
Translates to: IHCRSAESSCLRISN*ACRWSSFLAMLPRL
Trigger: TAGCCTCGGAAGCATGGCCAGGAAACTGGACCATCTGCAAGCCCAGTTTGAGATTCTGAGGCAGGAGCTCTCCGCAGACCTGCAGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp TGCTTAATGAAGCTGGTGGCCTCCTCCTCACTCAGTGACTCCTTCTaGGCCAGGAAATCGAAGAGCTCTCCTCCAGACACTCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: CLMKLVASSSLSDSF*ARKSKSSPPDTLPL
Trigger: GAGCGGGAGAGTGTCTGGAGGAGAGCTCTTCGATTTCCTGGCCCAGAAGGAGTCACTGAGTGAGGAGGAGGCCACCAGCTTCATTAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559007.5
ENST00000559897.1
CDS-3UTR CAA 90 bp CCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCACAGAAGGGAGCCCCGCTTGTTTGGACTCCTCATaGAGGCCTGGAACATACAAT +
Preference number: 5 (lower is better)
Translates to: PGAGAELGPKVCTEGSPACLDSS*RPGTYN
Trigger: ATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACA...AGCGGGGCTCCCTTCTGTGCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGGTGTCTGAGAGCCTCTaGGATTGTGAGCCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWEVSESL*DCEPFP
Trigger: CGGAAACGGCTCACAATCCAAGAGGCTCTCAGACAC...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp ACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCACCATGGCTTGCTGGTaGTCCACCGGCGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: TLFPMGRTLSLWCNFWPGTMACW*STGVIQ
Trigger: CTGGATCACGCCGGTGGACAACCAGCAAGCCATGGT...GCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGTTGACATGAGTTGGTaGACTGTCCCCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPVDMSW*TVPSPR
Trigger: TCTGGGGGAGGGGACAGTCAACCAACTCATGTCAAC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCGAAACATTCCTTTCCTaGCTTGGCCTGGTCTCACAT +
Preference number: 5 (lower is better)
Translates to: PVKARALSHPLLSCPGPLETFLS*LGLVSH
Trigger: ATGTGAGACCAGGCCAAGCAAGGAAAGGAATGTTTC...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS TCA 90 bp GCTACATCCCGTGGCCTGGATGTCTTCTCGCAGCAGCTTCTTCAATaGCTCCACCTTGCGGAACTCATACCTGAGCTGGGACAGGTCATG +
Preference number: 5 (lower is better)
Translates to: ATSRGLDVFSQQLLQ*LHLAELIPELGQVM
Trigger: CATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAAGAAGCTGCTGCGAGAAGACATCCAGGCCACGGGATGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS GCA 90 bp TTGGGAGGCATGCTTGAGTGGCATTTGAGAGTGTACTCTCTCAGGTaGTTGGTCTTCAGCTGGGTGGGCTCTGTCTTCCGCTGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LGGMLEWHLRVYSLR*LVFSWVGSVFRCSG
Trigger: CCCTGAACAGCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTACACTCTCAAATGCCACTCAAGCATGCCTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS GCA 90 bp AATGACTCCACCTTGCGGAACTCATACCTGAGCTGGGACAGGTCATaGCGGGCGCTCTCATTCTCCTCTCGGTACCAAGCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: NDSTLRNSYLSWDRS*RALSFSSRYQASFS
Trigger: TGAGAAGGAAGCTTGGTACCGAGAGGAGAATGAGAGCGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS GCA 90 bp TCAGAATCTCAAACTGGGCTTGCAGATGGTCCAGTTTCCTGGCCATaGTTCCGAGGCTACATCCCGTGGCCTGGATGTCTTCTCGCAGCA +
Preference number: 5 (lower is better)
Translates to: SESQTGLADGPVSWP*FRGYIPWPGCLLAA
Trigger: TGCTGCGAGAAGACATCCAGGCCACGGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGGACCATCTGCAAGCCCAGTTTGAGATTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 90 bp AGCAGCTTCTTCAATGACTCCACCTTGCGGAACTCATACCTGAGCTaGGACAGGTCATGCCGGGCGCTCTCATTCTCCTCTCGGTACCAA +
Preference number: 5 (lower is better)
Translates to: SSFFNDSTLRNSYLS*DRSCRALSFSSRYQ
Trigger: TTGGTACCGAGAGGAGAATGAGAGCGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAAGAAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS-3UTR CAA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCCATAATGATGTGACCTaGGGAAAATCCCATCCTCTC +
Preference number: 5 (lower is better)
Translates to: PVKARALSHPLLSCPGPLHNDVT*GKSHPL
Trigger: GAGAGGATGGGATTTTCCCAAGGTCACATCATTATG...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp ATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCACGGGGGGGCTTGTGGGAGGCTaGAGGCTCTGCCTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: MKLSCLVLNHFLSELFTGGLVGG*RLCLLL
Trigger: TAGGAGGAGGCAGAGCCTCAAGCCTCCCACAAGCCC...CCCCGTGAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS CCA 90 bp TGCTTAATGAAGCTGGTGGCCTCCTCCTCACTCAGTGACTCCTTCTaGGCCAGGAAATCGAAGAGCTCTCCTCCAGACACTAGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: CLMKLVASSSLSDSF*ARKSKSSPPDTSSR
Trigger: CCTTGAGCTAGTGTCTGGAGGAGAGCTCTTCGATTTCCTGGCCCAGAAGGAGTCACTGAGTGAGGAGGAGGCCACCAGCTTCATTAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000558069.5
ENST00000558482.5
ENST00000612884.4
CDS-3UTR CAA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGTGCAGCGTGATGACATaGTGGTGCAGCACCTGCCGC +
Preference number: 5 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKCSVMT*WCSTCR
Trigger: GCGGCAGGTGCTGCACCACAATGTCATCACGCTGCA...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp GCAAAGTGCTCAGGACGCCCGGGTGCTGGTGCTGAGCTGGGTCCAAAAGTCTGCCCAAAGTCAATCAGCTaGATGTGTGGAATGGGAATA +
Preference number: 5 (lower is better)
Translates to: AKCSGRPGAGAELGPKVCPKSIS*MCGMGI
Trigger: TATTCCCATTCCACACATCAAGCTGATTGACTTTGG...GCAGACTTTTGGACCCAGCTCAGCACCAGCACCCGGGCGTCCTGAGCACTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp TTCATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATCCTGCGCACCATGGCTaGCTGGTTGTCCACCGGCGT +
Preference number: 5 (lower is better)
Translates to: FMWSFLRVLTSPSYKDTNPAHHG*LVVHRR
Trigger: ACGCCGGTGGACAACCAGCAAGCCATGGTGCGCAGG...ATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CAA 90 bp CTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCTGGCTGAAGTTCTCCAGATaGACCACAGACTCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: LFPMGRTLSLWCNFWPGWLKFSR*TTDSLR
Trigger: GCGCAGGGAGTCTGTGGTCAATCTGGAGAACTTCAG...CCAGCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGGAGCGGGTGAGGTGGTaGCACAGGGACACGATGCTG +
Preference number: 5 (lower is better)
Translates to: PQTLRMADRGKPILWRIKERVRW*HRDTML
Trigger: CAGCATCGTGTCCCTGTGCAACCACCTCACCCGCTC...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp CACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAAGAAGGTCTGAGGTGTaGGTCAGCCTGACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: HFPQSPCSQWGGLCLSGVRRSEV*VSLTSW
Trigger: CCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT...TACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACTACTCTCTCAGGTGCTaGGTCTTCAGCTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RHEKGILALLKRRLPQLHYSLRC*VFSWVG
Trigger: GCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTA...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCATGCTTGAGTGGCATTaGAGAGTGTACTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASMLEWH*RVYSLR
Trigger: CCTGAGAGAGTACACTCTCAAATGCCACTCAAGCAT...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCAATCTCAAACTGGGCTaGCAGATGGTCCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCNLKLG*QMVQFP
Trigger: AGGAAACTGGACCATCTGCAAGCCCAGTTTGAGATT...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGAAGCTTGCCAGCTTCCTaGAGAATTGTTATTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRSLPAS*RIVIQG
Trigger: GCCCTGAATAACAATTCTCAAGGAAGCTGGCAAGCT...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CTCCCCAGCACCTGGAACCCGCTGGCTTCTCATGACTTTCGGGATAAGGGCAGACATTCCTTTCCTTGCTaGGCCTGGTCTCACATTTCT +
Preference number: 5 (lower is better)
Translates to: LPSTWNPLASHDFRDKGRHSFPC*AWSHIS
Trigger: AGAAATGTGAGACCAGGCCAAGCAAGGAAAGGAATG...TCTGCCCTTATCCCGAAAGTCATGAGAAGCCAGCGGGTTCCAGGTGCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS CCA 90 bp AAATTGCTGCTGGTTGTTGTTGGGAGGCCTCAGCTGCACTCCGTGTaGAATTCTCCACAGGGTGGCTTGAGTTCTCGTGACATAGCAGCT +
Preference number: 5 (lower is better)
Translates to: KLLLVVVGRPQLHSV*NSPQGGLSSRDIAA
Trigger: AGCTGCTATGTCACGAGAACTCAAGCCACCCTGTGGAGAATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS-3UTR CAA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCTGTTTGGACTCCTCATaGAGGCCTGGAACATACAAT +
Preference number: 5 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASCLDSS*RPGTYN
Trigger: ATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACA...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCTGCAGCGTGATGACATaGTGGTGCAGCACCTGCCGC +
Preference number: 5 (lower is better)
Translates to: KMSKITTWRASNGLLQKVCSVMT*WCSTCR
Trigger: GCGGCAGGTGCTGCACCACAATGTCATCACGCTGCA...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000457488.5
CDS-3UTR CAA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCATTGGGCCCATCTCTCTaGCAAAGTGCTCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPLGPSL*QSAQDA
Trigger: GGCGTCCTGAGCACTTTGCAAGAGAGATGGGCCCAA...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTCAGCCCTTCCCGCCATaGTTAGCCCTCCACACTGTT +
Preference number: 5 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGQPFPP*LALHTV
Trigger: AACAGTGTGGAGGGCTAACAATGGCGGGAAGGGCTG...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp AGAAGGTCTGAGGTGTTGGTCAGCCTGACGTCCTGGCTTCCATGGTTCTGGGAGTGTTTGGACTCCTCATaGAGGCCTGGAACATACAAT +
Preference number: 5 (lower is better)
Translates to: RRSEVLVSLTSWLPWFWECLDSS*RPGTYN
Trigger: ATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACA...CTCCCAGAACCATGGAAGCCAGGACGTCAGGCTGACCAACACCTCAGACCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCACCAAAGTCAATCAGCTaGATGTGTGGAATGGGAATA +
Preference number: 5 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSPKSIS*MCGMGI
Trigger: TATTCCCATTCCACACATCAAGCTGATTGACTTTGG...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CGCTTACTGAGCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGGAGCGGGTGAGGTGGTaGCACAGGGACACGATGCTG +
Preference number: 5 (lower is better)
Translates to: RLLSTYMPGFKNMSLLAWERVRW*HRDTML
Trigger: CAGCATCGTGTCCCTGTGCAACCACCTCACCCGCTC...CCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGCTCAGTAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp AAAATGAGCAAAATTACAACATGGCGGGCCAGCAATGGGCTGCTTCAGAAGGTCCCAGGGTCTCCTGGCTaGCCTGCAAGCTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: KMSKITTWRASNGLLQKVPGSPG*PASSSE
Trigger: TTCAGAAGAGCTTGCAGGCAAGCCAGGAGACCCTGG...GACCTTCTGAAGCAGCCCATTGCTGGCCCGCCATGTTGTAATTTTGCTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp AATTTTAGGGAGACACACTCAGCTCCTAACAGCAGGAGTGGTGGCAGTGAGGTACATGCCCCTTCTTCTTaGATGGGCTGCACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: NFRETHSAPNSRSGGSEVHAPSS*MGCTFS
Trigger: GCTGAAGGTGCAGCCCATCAAAGAAGAAGGGGCATG...TACCTCACTGCCACCACTCCTGCTGTTAGGAGCTGAGTGTGTCTCCCTAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAAATTGTTTTAACAGCTaGGCTGCCCTGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPNCFNS*AALPEP
Trigger: GGGCTCTGGCAGGGCAGCCAAGCTGTTAAAACAATT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp ACGGCAGGCCCCTGCAGTGCTATGTGCTTCTCTCCCAGCATGAACACAAGCTGCGCAGAATACATGAAGTaGCTTACTTTACCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TAGPCSAMCFSPSMNTSCAEYMK*LTLPLG
Trigger: TCCCAGAGGTAAAGTAAGCAACTTCATGTATTCTGC...GCAGCTTGTGTTCATGCTGGGAGAGAAGCACATAGCACTGCAGGGGCCTGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCAAGGATAGTACTGTTTTaGCCAGCCATCCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPRIVLF*PAIQGH
Trigger: GTGGCCCTGGATGGCTGGCAAAAACAGTACTATCCT...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CCAGTGAAAGCCAGGGCACTCTCACACCCACTTCTCTCCTGCCCAGGACCCCTCGAGATGAAGGAATTATaGCTGATTTTGTCAAGTGTG +
Preference number: 5 (lower is better)
Translates to: PVKARALSHPLLSCPGPLEMKEL*LILSSV
Trigger: CACACTTGACAAAATCAGCAATAATTCCTTCATCTC...GAGGGGTCCTGGGCAGGAGAGAAGTGGGTGTGAGAGTGCCCTGGCTTTCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp TGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGCCCACATGTGGACTGTTaGGATCCTGATTTGAACAAA +
Preference number: 5 (lower is better)
Translates to: WPGQKAGAPGEDSTVFASPHVDC*DPDLNK
Trigger: TTTGTTCAAATCAGGATCCAAACAGTCCACATGTGG...GCTGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS TCA 90 bp CCAGCTCCTCTCCGATGTCATAAAAGTCCTCCACCTTCTGCTGCTTaGATGGCTCCATGTTTGGACTCCTCATTGAGGCCTGGAACATAC +
Preference number: 5 (lower is better)
Translates to: PAPLRCHKSPPPSAA*MAPCLDSSLRPGTY
Trigger: GTATGTTCCAGGCCTCAATGAGGAGTCCAAACATGGAGCCATTCAAGCAGCAGAAGGTGGAGGACTTTTATGACATCGGAGAGGAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000558069.5
ENST00000558482.5
ENST00000559007.5
ENST00000559306.1
ENST00000561162.5
ENST00000612884.4
CDS TCA 90 bp ATTAGAGCTTCCAGCCTGCCAGAAATTCCTCAGTGCATGATCTGCTaGGCAGCTCTGACAGGGATTCACTGGTGTCCTGGTAGAATGTGG +
Preference number: 5 (lower is better)
Translates to: IRASSLPEIPQCMIC*AALTGIHWCPGRMW
Trigger: CCACATTCTACCAGGACACCAGTGAATCCCTGTCAGAGCTGCTCAGCAGATCATGCACTGAGGAATTTCTGGCAGGCTGGAAGCTCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS CCA 90 bp AACACACCAGTAGCTGTAGGAGACACATGGTTTGCAAATTGCTGCTaGTTGTTGTTGGGAGGCCTCAGCTGCACTCCGTGTGGAATTCTC +
Preference number: 5 (lower is better)
Translates to: NTPVAVGDTWFANCC*LLLGGLSCTPCGIL
Trigger: GAGAATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTCCTACAGCTACTGGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS-3UTR CAA 90 bp GATTGGTCCCTCACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGTCCACCTTCTGCTGCTaGAATGGCTCCATGTTTGGA +
Preference number: 5 (lower is better)
Translates to: DWSLTPKVHFPQSPCSQWSTFCC*NGSMFG
Trigger: TCCAAACATGGAGCCATTCAAGCAGCAGAAGGTGGA...CCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGTGAGGGACCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp ACACCCAAGGTTCACTTTCCTCAATCACCCTGTTCCCAATGGGGAGGACTCTGTGAAATACATTTTGGGTaGTCTGTGGTCAGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TPKVHFPQSPCSQWGGLCEIHFG*SVVSRQ
Trigger: CTGCCGGCTGACCACAGACAACCCAAAATGTATTTC...ACAGAGTCCTCCCCATTGGGAACAGGGTGATTGAGGAAAGTGAACCTTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGATTCTCGACACAGAGTaGGGGCCGTTAGCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKILDTE*GPLARR
Trigger: TCTTCTGGCTAACGGCCCCAACTCTGTGTCGAGAAT...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp GTTGGCCCGGACAGAAGGCAGGTGCTCCGGGAGAGGATAGTACTGTTTTTGCCAGGCCATGAAGACACTTaGAACTATACAAGTTATGCC +
Preference number: 5 (lower is better)
Translates to: VGPDRRQVLRERIVLFLPGHEDT*NYTSYA
Trigger: GGCATAACTTGTATAGTTCAAAGTGTCTTCATGGCC...TGGCAAAAACAGTACTATCCTCTCCCGGAGCACCTGCCTTCTGTCCGGGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGCCCAGCCTCAGACTGTaGGACATTACACTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKPSLRL*DITLSA
Trigger: AGCAGAGAGTGTAATGTCCAACAGTCTGAGGCTGGG...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS TCA 90 bp GGCAAAACGCTCGAAGTTGACATAGGAGTTGTTGGGAGGCATGCTTaGGTGGCATTTGAGAGTGTACTCTCTCAGGTGCTTGGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: GKTLEVDIGVVGRHA*VAFESVLSQVLGLQ
Trigger: CTGAAGACCAAGCACCTGAGAGAGTACACTCTCAAATGCCACTCAAGCATGCCTCCCAACAACTCCTATGTCAACTTCGAGCGTTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS-3UTR CAA 90 bp CGCTTACTGAGCACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGACGCAGGAGAATCGCTaGAAGCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RLLSTYMPGFKNMSLLAWTQENR*KPGGRG
Trigger: ACCTCTGCCTCCTGGCTTCAAGCGATTCTCCTGCGT...CCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGTGCTCAGTAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR CAA 90 bp CCCTCCCCTTCGCTGGATGTTTTGATGGCTGAAGCCTGGGCTCTGCTGCCTTCAGTCTTTAGAAGCTCTTaGTACAGAAAAAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: PSPSLDVLMAEAWALLPSVFRSS*YRKRSV
Trigger: AACAGACCTTTTTCTGTACAAAGAGCTTCTAAAGAC...TGAAGGCAGCAGAGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGGGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTGTAATTCCAGCACTTaGGAAGGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKCNSST*EGRGGW
Trigger: CCACCCACCTCGGCCTTCCAAAGTGCTGGAATTACA...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCCCTTCGCTGGATGTTTaGATGGCTGAAGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPPSLDV*MAEAWA
Trigger: AGCCCAGGCTTCAGCCATCAAAACATCCAGCGAAGG...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTGGAACTGCAAGCAGATaGCACCTCCAACCCCCATCT +
Preference number: 5 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLGTASR*HLQPPS
Trigger: AGATGGGGGTTGGAGGTGCAATCTGCTTGCAGTTCC...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS TCA 90 bp GACTCCTCATTGAGGCCTGGAACATACAATCCCAAATCACGCTGCTaGTTTTTGGCAAATGCTCGACTGGAAATCAGGCCTCTTCCGGTA +
Preference number: 5 (lower is better)
Translates to: DSSLRPGTYNPKSRC*FLANARLEIRPLPV
Trigger: TACCGGAAGAGGCCTGATTTCCAGTCGAGCATTTGCCAAAAATCAGCAGCGTGATTTGGGATTGTATGTTCCAGGCCTCAATGAGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS TCA 90 bp CTCCACCTTCTGCTGCTTGAATGGCTCCATGTTTGGACTCCTCATTaGGGCCTGGAACATACAATCCCAAATCACGCTGCTGATTTTTGG +
Preference number: 5 (lower is better)
Translates to: LHLLLLEWLHVWTPH*GLEHTIPNHAADFW
Trigger: CCAAAAATCAGCAGCGTGATTTGGGATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACATGGAGCCATTCAAGCAGCAGAAGGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS GCA 90 bp AAAAACACACCAGTAGCTGTAGGAGACACATGGTTTGCAAATTGCTaGTGGTTGTTGTTGGGAGGCCTCAGCTGCACTCCGTGTGGAATT +
Preference number: 5 (lower is better)
Translates to: KNTPVAVGDTWFANC*WLLLGGLSCTPCGI
Trigger: AATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTCCTACAGCTACTGGTGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CCA 90 bp ATTCTTCCATGCTATGTGAGTATGGACACGTCACTCAACATTTCCTaGCCTCAGTGTTCTTACCCAAGTTCACACTTGCCTGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ILPCYVSMDTSLNIS*PQCSYPSSHLPGAE
Trigger: CTCTGCCCCAGGCAAGTGTGAACTTGGGTAAGAACACTGAGGCCAGGAAATGTTGAGTGACGTGTCCATACTCACATAGCATGGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS-3UTR CAA 90 bp ATGTGGTCTTTCCTGCGTGTCCTAACCTCCCCTTCTTATAAGGACACCAATTATGTGTCTGAGAGCCTCTaGGATTGTGAGCCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: MWSFLRVLTSPSYKDTNYVSESL*DCEPFP
Trigger: CGGAAACGGCTCACAATCCAAGAGGCTCTCAGACAC...ATAATTGGTGTCCTTATAAGAAGGGGAGGTTAGGACACGCAGGAAAGACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CAA 90 bp ACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCAGGCAAGAATATGTCATTATaGGCCTGGCATGGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: TLFPMGRTLSLWCNFWPGKNMSL*AWHGGL
Trigger: TAAGCCACCATGCCAGGCCAATAATGACATATTCTT...GCCTGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp ACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCATGGTGGCTTAGGCCAGACCAACTGCTaGGAGGAAGGAAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TYMPGFKNMSLLAWHGGLGQTNC*EEGKQQ
Trigger: CTGCTGCTTTCCTTCCTCCAAGCAGTTGGTCTGGCC...TAAGCCACCATGCCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp CATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGTTGCTTGCTTCTGCAAACCTCTaGGGATGCATCACTGACTGG +
Preference number: 5 (lower is better)
Translates to: HLQVYAFHLHLAEYMKLLASANL*GCITDW
Trigger: CCAGTCAGTGATGCATCCCAAGAGGTTTGCAGAAGC...AAGCAACTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp TCATCACAGAGCTCTGGTATGATGGCTCTGTTGGGAAACTTCTCTCTCCCTGGTAAAAGGAACCTCCTGTaGAGGACCTTCTGGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SSQSSGMMALLGNFSLPGKRNLL*RTFWPL
Trigger: TAAAGGCCAGAAGGTCCTCAACAGGAGGTTCCTTTT...ACCAGGGAGAGAGAAGTTTCCCAACAGAGCCATCATACCAGAGCTCTGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp GACAATCATCTGCAGGTGTATGCATTCCACCTACACCTGGCAGAATACATGAAGGGGGTGCTCAAAGCTTaGGGTCATGAAACGACCATG +
Preference number: 5 (lower is better)
Translates to: DNHLQVYAFHLHLAEYMKGVLKA*GHETTM
Trigger: CATGGTCGTTTCATGACCCAAAGCTTTGAGCACCCC...CTTCATGTATTCTGCCAGGTGTAGGTGGAATGCATACACCTGCAGATGATTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCTGTAATGGGACACTGTaGGGAGTGGTGGGGACATGT +
Preference number: 5 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFCNGTL*GVVGTC
Trigger: ACATGTCCCCACCACTCCCAACAGTGTCCCATTACA...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCTTCAATGACTCCACCTaGCGGAACTCATACCTGAGC +
Preference number: 5 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFFNDST*RNSYLS
Trigger: GCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAA...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CTCCTGCTTGTTCTCCGGTCATTTCCGCACTGTATTCCTATTCTCTCCCCTCCACTGCTTGATGTTCTTTaGGATCACACTGATAGTGCA +
Preference number: 5 (lower is better)
Translates to: LLLVLRSFPHCIPILSPPLLDVL*DHTDSA
Trigger: TGCACTATCAGTGTGATCCAAAAGAACATCAAGCAG...TGGAGGGGAGAGAATAGGAATACAGTGCGGAAATGACCGGAGAACAAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp ATTTTTCACCCCCATTTAGTGTCAAGGTTGAGATGCATGGGTTTCCTTGCTCCCAGGCAGGAGAATTGCTaGAACCTGGAAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: IFHPHLVSRLRCMGFLAPRQENC*NLEDGG
Trigger: ACCTCCATCTTCCAGGTTCAAGCAATTCTCCTGCCT...GGGAGCAAGGAAACCCATGCATCTCAACCTTGACACTAAATGGGGGTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS CCA 90 bp TTCTGCTGCTTGAATGGCTCCATGTTTGGACTCCTCATTGAGGCCTaGAACATACAATCCCAAATCACGCTGCTGATTTTTGGCAAATGC +
Preference number: 5 (lower is better)
Translates to: FCCLNGSMFGLLIEA*NIQSQITLLIFGKC
Trigger: GCATTTGCCAAAAATCAGCAGCGTGATTTGGGATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACATGGAGCCATTCAAGCAGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS-3UTR CAA 90 bp CCCCAGACTCTGAGGATGGCAGACAGAGGAAAGCCCATTTTATGGAGAATTAAGTGTTTGGACTCCTCATaGAGGCCTGGAACATACAAT +
Preference number: 5 (lower is better)
Translates to: PQTLRMADRGKPILWRIKCLDSS*RPGTYN
Trigger: ATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACA...CTTAATTCTCCATAAAATGGGCTTTCCTCTGTCTGCCATCCTCAGAGTCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp ATCACCCTGTTCCCAATGGGGAGGACTCTGTCTCTCTGGTGTAATTTTTGGCCACCAAAGTCAATCAGCTaGATGTGTGGAATGGGAATA +
Preference number: 5 (lower is better)
Translates to: ITLFPMGRTLSLWCNFWPPKSIS*MCGMGI
Trigger: TATTCCCATTCCACACATCAAGCTGATTGACTTTGG...TGGCCAAAAATTACACCAGAGAGACAGAGTCCTCCCCATTGGGAACAGGGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000559007.5
CDS-3UTR CAA 90 bp ACTACTGCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGTCAGGGTCTCACTGTaGTTGCCTGGGCTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: TTASLQEGFKQQQLLTLTVRVSL*LPGLVF
Trigger: AAAGACCAGCCCAGGCAACAACAGTGAGACCCTGAC...AGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGCAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR CAA 90 bp AGGCATGAAAAAGGAATCCTGGCTTTACTGAAGAGGCGACTCCCCCAACTCCACGCATCTGGAAGTTGGTaGGTGCCTAAGTATAATTTA +
Preference number: 5 (lower is better)
Translates to: RHEKGILALLKRRLPQLHASGSW*VPKYNL
Trigger: TAAATTATACTTAGGCACCAACCAACTTCCAGATGC...GTGGAGTTGGGGGAGTCGCCTCTTCAGTAAAGCCAGGATTCCTTTTTCATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp GGCTTGGGACTCCTGTTCTCAGGGAAGGATTTTTCACCCCCATTTAGTGTCAAGCATTTAGTGTCAAGGTaGAGATGCATGGGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: GLGLLFSGKDFSPPFSVKHLVSR*RCMGFL
Trigger: AAGGAAACCCATGCATCTCAACCTTGACACTAAATG...CTTGACACTAAATGGGGGTGAAAAATCCTTCCCTGAGAACAGGAGTCCCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCGTGTCTGAGAGCCTCTaGGATTGTGAGCCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGVSESL*DCEPFP
Trigger: CGGAAACGGCTCACAATCCAAGAGGCTCTCAGACAC...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp TCATTTGTCAGACATGAGTGCTTGGTAAGTGAAAAATCAATGCAAACGAAAGGCCAGGATTTCTCCATGTaGGCCAGGCTGGTCTCACAC +
Preference number: 5 (lower is better)
Translates to: SFVRHECLVSEKSMQTKGQDFSM*ARLVSH
Trigger: GTGTGAGACCAGCCTGGCCAACATGGAGAAATCCTG...GCCTTTCGTTTGCATTGATTTTTCACTTACCAAGCACTCATGTCTGACAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp TCCCCTTCTTATAAGGACACCAATTATATTGCATCGGGGCCCATATCAGTGAGCCCAAAGTCAATCAGCTaGATGTGTGGAATGGGAATA +
Preference number: 5 (lower is better)
Translates to: SPSYKDTNYIASGPISVSPKSIS*MCGMGI
Trigger: TATTCCCATTCCACACATCAAGCTGATTGACTTTGG...GCTCACTGATATGGGCCCCGATGCAATATAATTGGTGTCCTTATAAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261891.7
ENST00000559007.5
CDS-3UTR CAA 90 bp ACCTGGCTGTGTGAAGGTCAAGGTCTGTTAACACGGCCAAAGGGACATTTAATATCATTTACCCTCTCATaGAGGGCATCACAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: TWLCEGQGLLTRPKGHLISFTLS*RASQLY
Trigger: ATAAAGCTGTGATGCCCTCAATGAGAGGGTAAATGA...TATTAAATGTCCCTTTGGCCGTGTTAACAGACCTTGACCTTCACACAGCCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGAAGCCGACCTTTTATTaGCAGTCTGGGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQKPTFY*QSGLGA
Trigger: TGCACCCAGCCCAGACTGCAAATAAAAGGTCGGCTT...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGGAGCACAATCAGTGTTaGTTCAACGGGACTGGACCC +
Preference number: 5 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQEHNQC*FNGTGP
Trigger: GGGTCCAGTCCCGTTGAACAAACACTGATTGTGCTC...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCTTATTTGAGGTTATCTaGTCCTTGTCTGTCACCTCC +
Preference number: 5 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFLFEVI*SLSVTS
Trigger: GGAGGTGACAGACAAGGACAAGATAACCTCAAATAA...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp GCCAGCCTACAGGAAGGTTTTAAACAACAACAATTGCTAACGCTTACTGAGCACAAGAATATGTCATTATaGGCCTGGCATGGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: ASLQEGFKQQQLLTLTEHKNMSL*AWHGGL
Trigger: TAAGCCACCATGCCAGGCCAATAATGACATATTCTT...GTGCTCAGTAAGCGTTAGCAATTGTTGTTGTTTAAAACCTTCCTGTAGGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558064.1
ENST00000559007.5
CDS-3UTR CAA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGCCTTCACTAAAAAGCTaGCCCTGTGTTGCCCCATCA +
Preference number: 5 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQPSLKS*PCVAPS
Trigger: TGATGGGGCAACACAGGGCAAGCTTTTTAGTGAAGG...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CATGAGATGAAGCTTTCCTGTCTTGTCCTAAACCACTTCCTGTCTGAGCTGTTCTGTTTGGATCCTGATTaGAACAAACCAGCTGTAATG +
Preference number: 5 (lower is better)
Translates to: HEMKLSCLVLNHFLSELFCLDPD*NKPAVM
Trigger: CATTACAGCTGGTTTGTTCAAATCAGGATCCAAACA...GAACAGCTCAGACAGGAAGTGGTTTAGGACAAGACAGGAAAGCTTCATCTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp ACTTACATGCCAGGCTTTAAGAATATGTCATTATTGGCCTGGCATGGTGGCTTATATCAGAAATACATTTaGGGTTGTCTGTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: TYMPGFKNMSLLAWHGGLYQKYI*GCLWSA
Trigger: GGCTGACCACAGACAACCCAAAATGTATTTCTGATA...TAAGCCACCATGCCAGGCCAATAATGACATATTCTTAAAGCCTGGCATGTAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559007.5
CDS-3UTR CAA 90 bp AAATATTACCCAAGATCTACAGTCCATAAGGTATGTAGGCAGAAAGTGAGATATAACGACCATGTGGCCTaGCGCTTCCCCATCTTTATG +
Preference number: 5 (lower is better)
Translates to: KYYPRSTVHKVCRQKVRYNDHVA*RFPIFM
Trigger: CATAAAGATGGGGAAGCGCAAGGCCACATGGTCGTT...ATATCTCACTTTCTGCCTACATACCTTATGGACTGTAGATCTTGGGTAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS-3UTR CAA 90 bp CTTTGTACAGAAAAAGGTCTGTTTACGACACGTCTAAGTGAGAAACAGTTACAGACTTCTGTGCAAGTTTaGGCAATTTTCCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LCTEKGLFTTRLSEKQLQTSVQV*AIFLLR
Trigger: CCTCAGCAGGAAAATTGCCAAAACTTGCACAGAAGT...CTGTAACTGTTTCTCACTTAGACGTGTCGTAAACAGACCTTTTTCTGTACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS GCA 72 bp AAGCAAAGGCCTCTCCATGGGCCCTCTGCATCTGGCTaGCCAGGCCAACCCTGGCGACAGAGCAGGGACCCT +
Preference number: 6 (lower is better)
Translates to: KQRPLHGPSASG*PGQPWRQSRDP
Trigger: AGGGTCCCTGCTCTGTCGCCAGGGTTGGCCTGGGCAGCCAGATGCAGAGGGCCCATGGAGAGGCCTTTGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS CAA 90 bp GCATCTGGCTGCCCAGGCCAACCCTGGCGACAGAGCAGGGACCCTTaGCCCATTGGAACTCATGGCTGTGCCCTTACCGTGATCCAGGGG +
Preference number: 6 (lower is better)
Translates to: ASGCPGQPWRQSRDP*PIGTHGCALTVIQG
Trigger: CCCCTGGATCACGGTAAGGGCACAGCCATGAGTTCCAATGGGCAAAGGGTCCCTGCTCTGTCGCCAGGGTTGGCCTGGGCAGCCAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS GCA 72 bp TCAGTGTTTAAAGCAAAGGCCTCTCCATGGGCCCTCTaGATCTGGCTGCCCAGGCCAACCCTGGCGACAGAG +
Preference number: 6 (lower is better)
Translates to: SVFKAKASPWAL*IWLPRPTLATE
Trigger: CTCTGTCGCCAGGGTTGGCCTGGGCAGCCAGATGCAGAGGGCCCATGGAGAGGCCTTTGCTTTAAACACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS CCA 72 bp TCATTGAAGATGGAGACCAGGGCCTCCACATCGTCCTaGATGGTATCGTGGGCCTCCACCAGGGCACGGCAT +
Preference number: 6 (lower is better)
Translates to: SLKMETRASTSS*MVSWASTRARH
Trigger: ATGCCGTGCCCTGGTGGAGGCCCACGATACCATCCAGGACGATGTGGAGGCCCTGGTCTCCATCTTCAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp GCTCTGACAGGGATTCACTGGTGTCCTGGTAGAATGTaGAGCCCAGGCCCTCAGAGCTCCCACTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ALTGIHWCPGRM*SPGPQSSHSPA
Trigger: AGCTGGAGAGTGGGAGCTCTGAGGGCCTGGGCTCCACATTCTACCAGGACACCAGTGAATCCCTGTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CAA 90 bp GTGGCCTGGATGTCTTCTCGCAGCAGCTTCTTCAATGACTCCACCTaGCGGAACTCATACCTGAGCTGGGACAGGTCATGCCGGGCGCTC +
Preference number: 6 (lower is better)
Translates to: VAWMSSRSSFFNDST*RNSYLSWDRSCRAL
Trigger: GAGCGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAAGAAGCTGCTGCGAGAAGACATCCAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CAA 90 bp CACACCCATCTCCATCCTGCTCTTCAGCAGCAGCCCGGGGTGTGTTaGGAGTCATCGAGCTCTGAACCCACATGTCAGCCTCCAGACCCA +
Preference number: 6 (lower is better)
Translates to: HTHLHPALQQQPGVC*ESSSSEPTCQPPDP
Trigger: TGGGTCTGGAGGCTGACATGTGGGTTCAGAGCTCGATGACTCCAAACACACCCCGGGCTGCTGCTGAAGAGCAGGATGGAGATGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558482.5
CDS CAA 90 bp CTGCAGGTCTGCGGAGAGCTCCTGCCTCAGAATCTCAAACTGGGCTaGCAGATGGTCCAGTTTCCTGGCCATGCTTCCGAGGCTACATCC +
Preference number: 6 (lower is better)
Translates to: LQVCGELLPQNLKLG*QMVQFPGHASEATS
Trigger: GGATGTAGCCTCGGAAGCATGGCCAGGAAACTGGACCATCTGCAAGCCCAGTTTGAGATTCTGAGGCAGGAGCTCTCCGCAGACCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS GCA 72 bp ACCTTGCGGAACTCATACCTGAGCTGGGACAGGTCATaGCGGGCGCTCTCATTCTCCTCTCGGTACCAAGCT +
Preference number: 6 (lower is better)
Translates to: TLRNSYLSWDRS*RALSFSSRYQA
Trigger: AGCTTGGTACCGAGAGGAGAATGAGAGCGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp GAGTGTACTCTCTCAGGTGCTTGGTCTTCAGCTGGGTaGGCTCTGTCTTCCGCTGTTCAGGGGCTCTGCCTT +
Preference number: 6 (lower is better)
Translates to: ECTLSGAWSSAG*ALSSAVQGLCL
Trigger: AAGGCAGAGCCCCTGAACAGCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp TCCATCCTGCTCTTCAGCAGCAGCCCGGGGTGTGTTTaGAGTCATCGAGCTCTGAACCCACATGTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SILLFSSSPGCV*SHRALNPHVSL
Trigger: GAGGCTGACATGTGGGTTCAGAGCTCGATGACTCCAAACACACCCCGGGCTGCTGCTGAAGAGCAGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558482.5
CDS CAA 72 bp CTCCATCCTGCTCTTCAGCAGCAGCCCGGGGTGTGTTaGGAGTCATCGAGCTCTGAACCCACATGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: LHPALQQQPGVC*ESSSSEPTCQP
Trigger: AGGCTGACATGTGGGTTCAGAGCTCGATGACTCCAAACACACCCCGGGCTGCTGCTGAAGAGCAGGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558482.5
CDS CAA 90 bp GGAGGCATGCTTGAGTGGCATTTGAGAGTGTACTCTCTCAGGTGCTaGGTCTTCAGCTGGGTGGGCTCTGTCTTCCGCTGTTCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GGMLEWHLRVYSLRC*VFSWVGSVFRCSGA
Trigger: AGCCCCTGAACAGCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTACACTCTCAAATGCCACTCAAGCATGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CAA 90 bp TGCCGGGCGCTCTCATTCTCCTCTCGGTACCAAGCTTCCTTCTCATaGAAGATGGAGACCAGGGCCTCCACATCGTCCTGGATGGTATCG +
Preference number: 6 (lower is better)
Translates to: CRALSFSSRYQASFS*KMETRASTSSWMVS
Trigger: CGATACCATCCAGGACGATGTGGAGGCCCTGGTCTCCATCTTCAATGAGAAGGAAGCTTGGTACCGAGAGGAGAATGAGAGCGCCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp TTGAGAGTGTACTCTCTCAGGTGCTTGGTCTTCAGCTaGGTGGGCTCTGTCTTCCGCTGTTCAGGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LRVYSLRCLVFS*VGSVFRCSGAL
Trigger: CAGAGCCCCTGAACAGCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTACACTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp TTCCTGGCCATGCTTCCGAGGCTACATCCCGTGGCCTaGATGTCTTCTCGCAGCAGCTTCTTCAATGACTCC +
Preference number: 6 (lower is better)
Translates to: FLAMLPRLHPVA*MSSRSSFFNDS
Trigger: GGAGTCATTGAAGAAGCTGCTGCGAGAAGACATCCAGGCCACGGGATGTAGCCTCGGAAGCATGGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp CCAGTTTCCTGGCCATGCTTCCGAGGCTACATCCCGTaGCCTGGATGTCTTCTCGCAGCAGCTTCTTCAATG +
Preference number: 6 (lower is better)
Translates to: PVSWPCFRGYIP*PGCLLAAASSM
Trigger: CATTGAAGAAGCTGCTGCGAGAAGACATCCAGGCCACGGGATGTAGCCTCGGAAGCATGGCCAGGAAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp CTGGTTGTTGTTGGGAGGCCTCAGCTGCACTCCGTGTaGAATTCTCCACAGGGTGGCTTGAGTTCTCGTGAC +
Preference number: 6 (lower is better)
Translates to: LVVVGRPQLHSV*NSPQGGLSSRD
Trigger: GTCACGAGAACTCAAGCCACCCTGTGGAGAATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CCA 72 bp TGGCAAACTGGCCACAAAGCCAGGTGGGCAGTGCGCTaGGAACTAGATGGGCATGACAGGAGTGAGAAACAC +
Preference number: 6 (lower is better)
Translates to: WQTGHKARWAVR*ELDGHDRSEKH
Trigger: GTGTTTCTCACTCCTGTCATGCCCATCTAGTTCCCAGCGCACTGCCCACCTGGCTTTGTGGCCAGTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561162.5
CDS TCA 72 bp CTGCTGCTTGAATGGCTCCATGTTTGGACTCCTCATTaGGGCCTGGAACATACAATCGGCGGGAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LLLEWLHVWTPH*GLEHTIGGRLS
Trigger: GCTCAGCCTCCCGCCGATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACATGGAGCCATTCAAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457488.5
ENST00000558482.5
ENST00000561162.5
ENST00000612884.4
CDS TCA 72 bp GCTTCTTCAATGACTCCACCTTGCGGAACTCATACCTaGGCTGGGACAGGTCATGCCGGGCGCTCTCATTCT +
Preference number: 6 (lower is better)
Translates to: ASSMTPPCGTHT*AGTGHAGRSHS
Trigger: AGAATGAGAGCGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS TCA 72 bp CGTGGCCTGGATGTCTTCTCGCAGCAGCTTCTTCAATaGCTCCACCTTGCGGAACTCATACCTGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: RGLDVFSQQLLQ*LHLAELIPELG
Trigger: TCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAAGAAGCTGCTGCGAGAAGACATCCAGGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp TTCAATGACTCCACCTTGCGGAACTCATACCTGAGCTaGGACAGGTCATGCCGGGCGCTCTCATTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: FNDSTLRNSYLS*DRSCRALSFSS
Trigger: AGAGGAGAATGAGAGCGCCCGGCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp GCCCTTACCGTGATCCAGGGGTGTCTGAGAGCCTCTTaGATTGTGAGCCGTTTCCGGGTCTCTTTAACCAGA +
Preference number: 6 (lower is better)
Translates to: ALTVIQGCLRAS*IVSRFRVSLTR
Trigger: TCTGGTTAAAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACACCCCTGGATCACGGTAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS CAA 72 bp TGCCCTTACCGTGATCCAGGGGTGTCTGAGAGCCTCTaGGATTGTGAGCCGTTTCCGGGTCTCTTTAACCAG +
Preference number: 6 (lower is better)
Translates to: CPYRDPGVSESL*DCEPFPGLFNQ
Trigger: CTGGTTAAAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACACCCCTGGATCACGGTAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558076.1
CDS TCA 72 bp CCACGTCTTCCACCACACAGGCAAAACGCTCGAAGTTaGCATAGGAGTTGTTGGGAGGCATGCTTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: PRLPPHRQNARS*HRSCWEACLSG
Trigger: GCCACTCAAGCATGCCTCCCAACAACTCCTATGTCAACTTCGAGCGTTTTGCCTGTGTGGTGGAAGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS TCA 72 bp TCCAGCCTGCCAGAAATTCCTCAGTGCATGATCTGCTaGGCAGCTCTGACAGGGATTCACTGGTGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: SSLPEIPQCMIC*AALTGIHWCPG
Trigger: ACCAGGACACCAGTGAATCCCTGTCAGAGCTGCTCAGCAGATCATGCACTGAGGAATTTCTGGCAGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS GCA 72 bp ATGCTTGAGTGGCATTTGAGAGTGTACTCTCTCAGGTaGTTGGTCTTCAGCTGGGTGGGCTCTGTCTTCCGC +
Preference number: 6 (lower is better)
Translates to: MLEWHLRVYSLR*LVFSWVGSVFR
Trigger: GCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTACACTCTCAAATGCCACTCAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CAA 72 bp CTTGAGTGGCATTTGAGAGTGTACTCTCTCAGGTGCTaGGTCTTCAGCTGGGTGGGCTCTGTCTTCCGCTGT +
Preference number: 6 (lower is better)
Translates to: LEWHLRVYSLRC*VFSWVGSVFRC
Trigger: ACAGCGGAAGACAGAGCCCACCCAGCTGAAGACCAAGCACCTGAGAGAGTACACTCTCAAATGCCACTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CAA 72 bp CTCTCATTCTCCTCTCGGTACCAAGCTTCCTTCTCATaGAAGATGGAGACCAGGGCCTCCACATCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LSFSSRYQASFS*KMETRASTSSW
Trigger: CCAGGACGATGTGGAGGCCCTGGTCTCCATCTTCAATGAGAAGGAAGCTTGGTACCGAGAGGAGAATGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CAA 72 bp GCTGTAGGAGACACATGGTTTGCAAATTGCTGCTGGTaGTTGTTGGGAGGCCTCAGCTGCACTCCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: AVGDTWFANCCW*LLGGLSCTPCG
Trigger: TCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTCCTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CCA 72 bp CCTTTTGACGTGATCCAGGGGTGTCTGAGAGCCTCTTaGATTGTGAGCCGTTTCCGGGTCTCTTTAACCAGA +
Preference number: 6 (lower is better)
Translates to: PFDVIQGCLRAS*IVSRFRVSLTR
Trigger: TCTGGTTAAAGAGACCCGGAAACGGCTCACAATCCAAGAGGCTCTCAGACACCCCTGGATCACGTCAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp GAGACACATGGTTTGCAAATTGCTGCTGGTTGTTGTTaGGAGGCCTCAGCTGCACTCCGTGTGGAATTCTCC +
Preference number: 6 (lower is better)
Translates to: ETHGLQIAAGCC*EASAALRVEFS
Trigger: GGAGAATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CCA 72 bp GTAGCTGTAGGAGACACATGGTTTGCAAATTGCTGCTaGTTGTTGTTGGGAGGCCTCAGCTGCACTCCGTGT +
Preference number: 6 (lower is better)
Translates to: VAVGDTWFANCC*LLLGGLSCTPC
Trigger: ACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTCCTACAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CAA 72 bp ATGTCTTCTCGCAGCAGCTTCTTCAATGACTCCACCTaGCGGAACTCATACCTGAGCTGGGACAGGTCATGC +
Preference number: 6 (lower is better)
Translates to: MSSRSSFFNDST*RNSYLSWDRSC
Trigger: GCATGACCTGTCCCAGCTCAGGTATGAGTTCCGCAAGGTGGAGTCATTGAAGAAGCTGCTGCGAGAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CAA 72 bp GGAGACACATGGTTTGCAAATTGCTGCTGGTTGTTGTaGGGAGGCCTCAGCTGCACTCCGTGTGGAATTCTC +
Preference number: 6 (lower is better)
Translates to: GDTWFANCCWLL*GGLSCTPCGIL
Trigger: GAGAATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CAA 90 bp ACACCAGTAGCTGTAGGAGACACATGGTTTGCAAATTGCTGCTGGTaGTTGTTGGGAGGCCTCAGCTGCACTCCGTGTGGAATTCTCCAC +
Preference number: 6 (lower is better)
Translates to: TPVAVGDTWFANCCW*LLGGLSCTPCGILH
Trigger: GTGGAGAATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTCCTACAGCTACTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CAA 90 bp TCACTCAACATTTCCTGGCCTCAGTGTTCTTACCCAAGTTCACACTaGCCTGGGGCAGAGCCAAGATTAAAGGTCAGGCCTCTTGACCCC +
Preference number: 6 (lower is better)
Translates to: SLNISWPQCSYPSSH*PGAEPRLKVRPLDP
Trigger: GGGGTCAAGAGGCCTGACCTTTAATCTTGGCTCTGCCCCAGGCAAGTGTGAACTTGGGTAAGAACACTGAGGCCAGGAAATGTTGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CCA 72 bp CTGCAAACCTCTTGGGATGCATCACTGACTGGATTCTaGCGATTAGAGCTTCCAGCCTGCCAGAAATTCCTC +
Preference number: 6 (lower is better)
Translates to: LQTSWDASLTGF*RLELPACQKFL
Trigger: GAGGAATTTCTGGCAGGCTGGAAGCTCTAATCGCCAGAATCCAGTCAGTGATGCATCCCAAGAGGTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS CCA 72 bp CATGCTTCTGCAAACCTCTTGGGATGCATCACTGACTaGATTCTGGCGATTAGAGCTTCCAGCCTGCCAGAA +
Preference number: 6 (lower is better)
Translates to: HASANLLGCITD*ILAIRASSLPE
Trigger: TTCTGGCAGGCTGGAAGCTCTAATCGCCAGAATCCAGTCAGTGATGCATCCCAAGAGGTTTGCAGAAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612884.4
CDS CAA 72 bp GTAGGAGACACATGGTTTGCAAATTGCTGCTGGTTGTaGTTGGGAGGCCTCAGCTGCACTCCGTGTGGAATT +
Preference number: 6 (lower is better)
Translates to: VGDTWFANCCWL*LGGLSCTPCGI
Trigger: AATTCCACACGGAGTGCAGCTGAGGCCTCCCAACAACAACCAGCAGCAATTTGCAAACCATGTGTCTCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CAA 72 bp ATTTCCTGGCCTCAGTGTTCTTACCCAAGTTCACACTaGCCTGGGGCAGAGCCAAGATTAAAGGTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: ISWPQCSYPSSH*PGAEPRLKVRP
Trigger: AGGCCTGACCTTTAATCTTGGCTCTGCCCCAGGCAAGTGTGAACTTGGGTAAGAACACTGAGGCCAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS TCA 72 bp CTCCGATGTCATAAAAGTCCTCCACCTTCTGCTGCTTaGATGGCTCCATGTTTGGACTCCTCATTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: LRCHKSPPPSAA*MAPCLDSSLRP
Trigger: AGGCCTCAATGAGGAGTCCAAACATGGAGCCATTCAAGCAGCAGAAGGTGGAGGACTTTTATGACATCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261891.7
ENST00000457488.5
ENST00000558069.5
ENST00000558482.5
ENST00000559007.5
ENST00000559306.1
ENST00000561162.5
ENST00000612884.4
CDS TCA 72 bp CATAGGAGTTGTTGGGAGGCATGCTTGAGTGGCATTTaGGAGTGTACTCTCTCAGGTGCTTGGTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: HRSCWEACLSGI*ECTLSGAWSSA
Trigger: AGCTGAAGACCAAGCACCTGAGAGAGTACACTCTCAAATGCCACTCAAGCATGCCTCCCAACAACTCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS TCA 72 bp CTGCTGCTTGAATGGCTCCATGTTTGGACTCCTCATTaGGGCCTGGAACATACAATCCCAAATCACGCTGCT +
Preference number: 6 (lower is better)
Translates to: LLLEWLHVWTPH*GLEHTIPNHAA
Trigger: AGCAGCGTGATTTGGGATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACATGGAGCCATTCAAGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS TCA 72 bp CTCGAAGTTGACATAGGAGTTGTTGGGAGGCATGCTTaGGTGGCATTTGAGAGTGTACTCTCTCAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: LEVDIGVVGRHA*VAFESVLSQVL
Trigger: AAGCACCTGAGAGAGTACACTCTCAAATGCCACTCAAGCATGCCTCCCAACAACTCCTATGTCAACTTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558069.5
ENST00000612884.4
CDS CCA 72 bp CTGGAACATACAATCCCAAATCACGCTGCTGATTTTTaGCAAATGCTCGACTGGAAATCAGGCCTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: LEHTIPNHAADF*QMLDWKSGLFR
Trigger: CCGGAAGAGGCCTGATTTCCAGTCGAGCATTTGCCAAAAATCAGCAGCGTGATTTGGGATTGTATGTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS TCA 72 bp TTGAGGCCTGGAACATACAATCCCAAATCACGCTGCTaGTTTTTGGCAAATGCTCGACTGGAAATCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LRPGTYNPKSRC*FLANARLEIRP
Trigger: AGGCCTGATTTCCAGTCGAGCATTTGCCAAAAATCAGCAGCGTGATTTGGGATTGTATGTTCCAGGCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CCA 72 bp TGCTATGTGAGTATGGACACGTCACTCAACATTTCCTaGCCTCAGTGTTCTTACCCAAGTTCACACTTGCCT +
Preference number: 6 (lower is better)
Translates to: CYVSMDTSLNIS*PQCSYPSSHLP
Trigger: AGGCAAGTGTGAACTTGGGTAAGAACACTGAGGCCAGGAAATGTTGAGTGACGTGTCCATACTCACATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1
CDS CAA 90 bp GCTGCTGTGGTGGAGGAGGCTTTCTTGCTTTTAACCAAGTTCATTTaGCTCTCAGTCTACAGCCTGAGTTACAAGAGACCACTGTACTAT +
Preference number: 6 (lower is better)
Translates to: AAVVEEAFLLLTKFI*LSVYSLSYKRPLYY
Trigger: ATAGTACAGTGGTCTCTTGTAACTCAGGCTGTAGACTGAGAGCAAAATGAACTTGGTTAAAAGCAAGAAAGCCTCCTCCACCACAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559897.1
CDS CCA 72 bp TTGAATGGCTCCATGTTTGGACTCCTCATTGAGGCCTaGAACATACAATCCCAAATCACGCTGCTGATTTTT +
Preference number: 6 (lower is better)
Translates to: LNGSMFGLLIEA*NIQSQITLLIF
Trigger: AAAAATCAGCAGCGTGATTTGGGATTGTATGTTCCAGGCCTCAATGAGGAGTCCAAACATGGAGCCATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559306.1