RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAP-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000272324

Ensembl transcript IDs: ENST00000606513.5, ENST00000606588.1

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGAGGAAGGAGGGCTGAATTCATCCTCTTATCGGGAGCCCACTCCTaGGCTCACTCGCGCACGCCCGCCCGGCCCGAGAACCGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGRRAEFILLSGAHS*AHSRTPARPENRAA
Trigger: GGCGGCGCGGTTCTCGGGCCGGGCGGGCGTGCGCGAGTGAGCTCAGGAGTGGGCTCCCGATAAGAGGATGAATTCAGCCCTCCTTCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606513.5
CDS TCA 90 bp CAGTTCTGGAGGCTGGGAAGTCCAAGGTCAAGGGCCCACATCTGGTaGAGGCCTTCTTGGTGTGTCATCCCATGGTGGAGGGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: QFWRLGSPRSRAHIW*RPSWCVIPWWRVEG
Trigger: CCCTTCCACCCTCCACCATGGGATGACACACCAAGAAGGCCTTCACCAGATGTGGGCCCTTGACCTTGGACTTCCCAGCCTCCAGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606588.1
CDS GCA 90 bp TATTGGTGTTTCCAGAGCTTCCCTAGTTTTCTTTCTTTCAGAGGCTaGCGGAGTCTTCTCCTTAATACTGTGAGCCCCTCCAGTACCCTG +
Preference number: 5 (lower is better)
Translates to: YWCFQSFPSFLSFRG*RSLLLNTVSPSSTL
Trigger: CAGGGTACTGGAGGGGCTCACAGTATTAAGGAGAAGACTCCGGCAGCCTCTGAAAGAAAGAAAACTAGGGAAGCTCTGGAAACACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606513.5
CDS GCA 90 bp TATTGGTGTTTCCAGAGCTTCCCTAGTTTTCTTTCTTTCAGAGGCTaGCGGAGTCTTCTCCTTAATACTGTGAGCCCCTCCAGTACCAGT +
Preference number: 5 (lower is better)
Translates to: YWCFQSFPSFLSFRG*RSLLLNTVSPSSTS
Trigger: ACTGGTACTGGAGGGGCTCACAGTATTAAGGAGAAGACTCCGGCAGCCTCTGAAAGAAAGAAAACTAGGGAAGCTCTGGAAACACCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606588.1
CDS CCA 90 bp TACTGTGAGCCCCTCCAGTACCCTGTAAATATTCCAATAAGAACTTaGAGTTGGTTTCTCCTTAGTTCTGGAGGCTGGGAAGTCCAAGGT +
Preference number: 5 (lower is better)
Translates to: YCEPLQYPVNIPIRT*SWFLLSSGGWEVQG
Trigger: ACCTTGGACTTCCCAGCCTCCAGAACTAAGGAGAAACCAACTCCAAGTTCTTATTGGAATATTTACAGGGTACTGGAGGGGCTCACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606513.5
CDS TCA 90 bp GTTTTCTTTCTTTCAGAGGCTGCCGGAGTCTTCTCCTTAATACTGTaGGCCCCTCCAGTACCCTGTAAATATTCCAATAAGAACTTGGAG +
Preference number: 5 (lower is better)
Translates to: VFFLSEAAGVFSLIL*APPVPCKYSNKNLE
Trigger: CTCCAAGTTCTTATTGGAATATTTACAGGGTACTGGAGGGGCTCACAGTATTAAGGAGAAGACTCCGGCAGCCTCTGAAAGAAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606513.5
CDS TCA 72 bp AGGGCTGAATTCATCCTCTTATCGGGAGCCCACTCCTaGGCTCACTCGCGCACGCCCGCCCGGCCCGAGAAC +
Preference number: 6 (lower is better)
Translates to: RAEFILLSGAHS*AHSRTPARPEN
Trigger: GTTCTCGGGCCGGGCGGGCGTGCGCGAGTGAGCTCAGGAGTGGGCTCCCGATAAGAGGATGAATTCAGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606513.5
CDS TCA 72 bp AGGCTGGGAAGTCCAAGGTCAAGGGCCCACATCTGGTaGAGGCCTTCTTGGTGTGTCATCCCATGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: RLGSPRSRAHIW*RPSWCVIPWWR
Trigger: CCTCCACCATGGGATGACACACCAAGAAGGCCTTCACCAGATGTGGGCCCTTGACCTTGGACTTCCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606513.5
ENST00000606588.1
CDS CAA 72 bp TCCAAGGTCAAGGGCCCACATCTGGTGAAGGCCTTCTaGGTGTGTCATCCCATGGTGGAGGGTGGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SKVKGPHLVKAF*VCHPMVEGGRA
Trigger: TGCCCTTCCACCCTCCACCATGGGATGACACACCAAGAAGGCCTTCACCAGATGTGGGCCCTTGACCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606513.5
ENST00000606588.1
CDS TCA 72 bp CTTTCAGAGGCTGCCGGAGTCTTCTCCTTAATACTGTaGGCCCCTCCAGTACCAGTTCTGGAGGCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: LSEAAGVFSLIL*APPVPVLEAGK
Trigger: CTTCCCAGCCTCCAGAACTGGTACTGGAGGGGCTCACAGTATTAAGGAGAAGACTCCGGCAGCCTCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606588.1
CDS TCA 72 bp CTTTCAGAGGCTGCCGGAGTCTTCTCCTTAATACTGTaGGCCCCTCCAGTACCCTGTAAATATTCCAATAAG +
Preference number: 6 (lower is better)
Translates to: LSEAAGVFSLIL*APPVPCKYSNK
Trigger: CTTATTGGAATATTTACAGGGTACTGGAGGGGCTCACAGTATTAAGGAGAAGACTCCGGCAGCCTCTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606513.5
CDS CCA 72 bp CCCCTCCAGTACCCTGTAAATATTCCAATAAGAACTTaGAGTTGGTTTCTCCTTAGTTCTGGAGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: PLQYPVNIPIRT*SWFLLSSGGWE
Trigger: TTCCCAGCCTCCAGAACTAAGGAGAAACCAACTCCAAGTTCTTATTGGAATATTTACAGGGTACTGGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606513.5