Pregenerated sensors for DANCR (Homo sapiens)
Ensembl gene IDs: ENSG00000226950Ensembl transcript IDs: ENST00000411630.7, ENST00000425653.2, ENST00000441504.2, ENST00000444958.2, ENST00000623036.1, ENST00000653147.1, ENST00000675590.1, ENST00000675705.1, ENST00000675988.1, ENST00000676012.1, ENST00000676199.1, ENST00000676262.1, ENST00000676450.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCCTCGAATCCGGGACCCGCGGGACCCGCAGGACCCGTAGTGCCTaGGGCCGAGGTGGGCGCGGCCCGGGCTCTCATGCTTTCCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: RLESGTRGTRRTRSA*GRGGRGPGSHAFPH Trigger: GTGAGGGAAAGCATGAGAGCCCGGGCCGCGCCCACCTCGGCCCCAGGCACTACGGGTCCTGCGGGTCCCGCGGGTCCCGGATTCGAGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS TCA 90 bp | CCTGGAGCCAGGAGGTGGCTGGGAGGTGGGCGCGGTGAGGAGGTCTaGGCAGCCGCAGGCTCTGGGCCGCTTCGCCTCGAATCCGGGACC | + |
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Preference number: 5 (lower is better) Translates to: PGARRWLGGGRGEEV*AAAGSGPLRLESGT Trigger: GGTCCCGGATTCGAGGCGAAGCGGCCCAGAGCCTGCGGCTGCTCAGACCTCCTCACCGCGCCCACCTCCCAGCCACCTCCTGGCTCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CCA 90 bp | GAAGCAGGAGGGTCGCGAGGCCCGCAGCCAATCCCGGGAAGACTCTaGGCAAGGGCGGGGCGCGCAGCCGATCCCCTGGAGAGGTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: EAGGSRGPQPIPGRL*ARAGRAADPLERSG Trigger: ACCCGACCTCTCCAGGGGATCGGCTGCGCGCCCCGCCCTTGCCCAGAGTCTTCCCGGGATTGGCTGCGGGCCTCGCGACCCTCCTGCTTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411630.7 |
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| CDS GCA 90 bp | CAGTGTTGTCGCGGCCTGCTAAGGCTCTCAGAACTCCCGCGAGGGTaGGGGTCTTCCTCCAGCGCTGGGCTACTTGGTCCCGCCCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: QCCRGLLRLSELPRG*GSSSSAGLLGPAPQ Trigger: TTGAGGGGCGGGACCAAGTAGCCCAGCGCTGGAGGAAGACCCGCACCCTCGCGGGAGTTCTGAGAGCCTTAGCAGGCCGCGACAACACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CCA 90 bp | AGAACTCCCGCGAGGGTGCGGGTCTTCCTCCAGCGCTGGGCTACTTaGTCCCGCCCCTCAAGGTATTTCTGCTCCTTGTGTGCCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: RTPARVRVFLQRWAT*SRPSRYFCSLCARD Trigger: GTCCCTGGCACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCGCTGGAGGAAGACCCGCACCCTCGCGGGAGTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 90 bp | TTCCTCCAGCGCTGGGCTACTTGGTCCCGCCCCTCAAGGTATTTCTaGTCCTTGTGTGCCAGGGACCCCGGTAGTCCTGCTCCTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FLQRWATWSRPSRYF*SLCARDPGSPAPAL Trigger: CAGAGCAGGAGCAGGACTACCGGGGTCCCTGGCACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCGCTGGAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CCA 90 bp | AAGGCTCTCAGAACTCCCGCGAGGGTGCGGGTCTTCCTCCAGCGCTaGGCTACTTGGTCCCGCCCCTCAAGGTATTTCTGCTCCTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: KALRTPARVRVFLQR*ATWSRPSRYFCSLC Trigger: ACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCGCTGGAGGAAGACCCGCACCCTCGCGGGAGTTCTGAGAGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 90 bp | CATGAAGCACCTGCTACACTGCCCTGTTGCCACCAGCATTGTCACTaGTCTAGCTCCTGTGGCACTGCACGGACACGTGGTTGCTACAAG | + |
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Preference number: 5 (lower is better) Translates to: HEAPATLPCCHQHCH*SSSCGTARTRGCYK Trigger: CTTGTAGCAACCACGTGTCCGTGCAGTGCCACAGGAGCTAGAGCAGTGACAATGCTGGTGGCAACAGGGCAGTGTAGCAGGTGCTTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000676262.1 |
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| CDS TCA 90 bp | ATCAGTTTCACTGAGCCAAATCAAATGATGCTCCTCAGGAGGCTCTaGTGGGGAATGTGTTCCTTGGCATCTCCCAGCTCCTGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ISFTEPNQMMLLRRL*WGMCSLASPSSWGL Trigger: CAGCCCCCAGGAGCTGGGAGATGCCAAGGAACACATTCCCCATCAGAGCCTCCTGAGGAGCATCATTTGATTTGGCTCAGTGAAACTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000676199.1 |
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| CDS GCA 90 bp | ATTTCTTTACCTGCTACACTGCCCTGTTGCCACCAGCATTGTCACTaGTCTAGCTCCTGTGGCACTGCACGGACACGTGGTTGCTACAAG | + |
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Preference number: 5 (lower is better) Translates to: ISLPATLPCCHQHCH*SSSCGTARTRGCYK Trigger: CTTGTAGCAACCACGTGTCCGTGCAGTGCCACAGGAGCTAGAGCAGTGACAATGCTGGTGGCAACAGGGCAGTGTAGCAGGTAAAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675988.1 |
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| CDS GCA 90 bp | AAATATCTTGATTTTGGCATTGTCCCTGCGACGCTGCCTTCTCCCTaGCTAGGATGGATCAGCGTGGGACACAGGGTAGAAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: KYLDFGIVPATLPSP*LGWISVGHRVEGRG Trigger: ACCTCTGCCTTCTACCCTGTGTCCCACGCTGATCCATCCTAGGCAGGGAGAAGGCAGCGTCGCAGGGACAATGCCAAAATCAAGATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 90 bp | GAAAAGACAAGAGACCCAAGGTCAGGCCAAGTAAGTTTATTAACCTaGCAGGCTTCTCCACCAGTCGGAGGTGGCAGCCCTGAGCTTACA | + |
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Preference number: 5 (lower is better) Translates to: EKTRDPRSGQVSLLT*QASPPVGGGSPELT Trigger: TGTAAGCTCAGGGCTGCCACCTCCGACTGGTGGAGAAGCCTGGCAGGTTAATAAACTTACTTGGCCTGACCTTGGGTCTCTTGTCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 90 bp | CATTGTCACTGCTCTAGCTCCTGTGGCACTGCACGGACACGTGGTTaGTACAAGTTAGTACGCATATTTGGCCTTATTAGAGGCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: HCHCSSSCGTARTRG*YKLVRIFGLIRGTF Trigger: GAAAGTGCCTCTAATAAGGCCAAATATGCGTACTAACTTGTAGCAACCACGTGTCCGTGCAGTGCCACAGGAGCTAGAGCAGTGACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000675988.1 ENST00000676262.1 |
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| CDS TCA 90 bp | CTGAAGGCCAGAAGTCAGAAATCAGTTTCACTGAGCCAAATCAAATaGTGCTCCTCAGGAGGCTCTGATGGGGAATGTGTTCCTTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LKARSQKSVSLSQIK*CSSGGSDGECVPWH Trigger: ATGCCAAGGAACACATTCCCCATCAGAGCCTCCTGAGGAGCATCATTTGATTTGGCTCAGTGAAACTGATTTCTGACTTCTGGCCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000676199.1 |
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| CDS GCA 90 bp | TTAAATGAAAAGGTTGAAAAGGTGAACATGAAGCACCTGCTACACTaGCCTGTTGCCACCAGCATTGTCACTGCTCTAGCTCCTGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LNEKVEKVNMKHLLH*PVATSIVTALAPVA Trigger: TGCCACAGGAGCTAGAGCAGTGACAATGCTGGTGGCAACAGGGCAGTGTAGCAGGTGCTTCATGTTCACCTTTTCAACCTTTTCATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000676262.1 |
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| CDS GCA 90 bp | CAAGTAACTCAAGGGGCAAAGGACCACCACCAGGACTCCGTGGAGTaGTTTGTGAAACCAGTGGTTATTCTTGACAACTATTTGCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: QVTQGAKDHHQDSVE*FVKPVVILDNYLLE Trigger: CTCTAGCAAATAGTTGTCAAGAATAACCACTGGTTTCACAAAGCACTCCACGGAGTCCTGGTGGTGGTCCTTTGCCCCTTGAGTTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 90 bp | AAAGAAAAGGTTTGTCTCATGGTTCAGCAGGCTGCACAGGGAGCATaGCTGCTGAGGCTTCAGGAAACTTACAATCATGGGGTATGTCTA | + |
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Preference number: 5 (lower is better) Translates to: KEKVCLMVQQAAQGA*LLRLQETYNHGVCL Trigger: TAGACATACCCCATGATTGTAAGTTTCCTGAAGCCTCAGCAGCCATGCTCCCTGTGCAGCCTGCTGAACCATGAGACAAACCTTTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 90 bp | ACTTTACAGAATGGAGAGAAGCAGAGGCAGTTAGGTAAGTTTGCATaGGATGCGCAATGTAGTTCTGATGCTACAGGGCCATTACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: TLQNGEKQRQLGKFA*DAQCSSDATGPLQG Trigger: ACCCTGTAATGGCCCTGTAGCATCAGAACTACATTGCGCATCGCATGCAAACTTACCTAACTGCCTCTGCTTCTCTCCATTCTGTAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 90 bp | TACCTACAAAAGGTCAAGCACCTGACTAGACCCTCTGTAATATGGTaGGAACTAAGGTGGACTTTACAGAATGGAGAGAAGCAGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: YLQKVKHLTRPSVIW*ELRWTLQNGEKQRQ Trigger: CTGCCTCTGCTTCTCTCCATTCTGTAAAGTCCACCTTAGTTCCCACCATATTACAGAGGGTCTAGTCAGGTGCTTGACCTTTTGTAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 90 bp | GTCAAGCACCTGACTAGACCCTCTGTAATATGGTGGGAACTAAGGTaGACTTTACAGAATGGAGAGAAGCAGAGGCAGTTAGGTAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VKHLTRPSVIWWELR*TLQNGEKQRQLGKF Trigger: AAACTTACCTAACTGCCTCTGCTTCTCTCCATTCTGTAAAGTCCACCTTAGTTCCCACCATATTACAGAGGGTCTAGTCAGGTGCTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 90 bp | ACTTACCTACAAAAGGTCAAGCACCTGACTAGACCCTCTGTAATATaGTGGGAACTAAGGTGGACTTTACAGAATGGAGAGAAGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: TYLQKVKHLTRPSVI*WELRWTLQNGEKQR Trigger: CCTCTGCTTCTCTCCATTCTGTAAAGTCCACCTTAGTTCCCACCATATTACAGAGGGTCTAGTCAGGTGCTTGACCTTTTGTAGGTAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 90 bp | CAGTATGTTACCATACTTGGGGGATTAGCCGCCGTAGTTAAATGGTaGGTTCCTGTTGTTCCCAGCCCATTTCTAGCTAATTTAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: QYVTILGGLAAVVKW*VPVVPSPFLANLKR Trigger: TCTCTTTAAATTAGCTAGAAATGGGCTGGGAACAACAGGAACCCACCATTTAACTACGGCGGCTAATCCCCCAAGTATGGTAACATACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 90 bp | GTTCACTACTATTTTCCGCGTTGCTCTCAATACCTCGTGGATCTCTaGTTCTCTAAGTCTGAAACCACACTAGAAACACAGCTGTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: VHYYFPRCSQYLVDL*FSKSETTLETQLFC Trigger: ACAAAACAGCTGTGTTTCTAGTGTGGTTTCAGACTTAGAGAAGCAGAGATCCACGAGGTATTGAGAGCAACGCGGAAAATAGTAGTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 90 bp | AACACAGTTTTTACACCTTTCATCTTGACAGTACCTAGAAAACCTTaGCATTCTCTTGGCCCACTTCACTGGACCACTGTTCTGACAGAA | + |
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Preference number: 5 (lower is better) Translates to: NTVFTPFILTVPRKP*HSLGPLHWTTVLTE Trigger: TTCTGTCAGAACAGTGGTCCAGTGAAGTGGGCCAAGAGAATGGCAAGGTTTTCTAGGTACTGTCAAGATGAAAGGTGTAAAAACTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 90 bp | TTATCTCACTTTAGCAGTTTGTATTACCTCCAGGACACTGCTGGCTaGAGCTGTACAGCCCGCAGGGCAAAAATTATAATTAGAATGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSHFSSLYYLQDTAG*SCTARRAKIIIRML Trigger: AAGCATTCTAATTATAATTTTTGCCCTGCGGGCTGTACAGCTTCAGCCAGCAGTGTCCTGGAGGTAATACAAACTGCTAAAGTGAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 90 bp | GGACGTGAGCCGATCACTAAATCCTCCTGCTCATGTTTCCTTGCTTaGAAAATAAGGAATAACAGTACCTACTTCATTGGGACTAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GREPITKSSCSCFLA*KIRNNSTYFIGTSL Trigger: CAAACTAGTCCCAATGAAGTAGGTACTGTTATTCCTTATTTTTCAAGCAAGGAAACATGAGCAGGAGGATTTAGTGATCGGCTCACGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 90 bp | AGGACACCAAATCTCAAGAGACAAGTGACTTTCCAGAAGTCACATTaGCTAAAAGTTATACATGTGAAGCCTCTCATTCAGAGATACTCA | + |
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Preference number: 5 (lower is better) Translates to: RTPNLKRQVTFQKSH*LKVIHVKPLIQRYS Trigger: TGAGTATCTCTGAATGAGAGGCTTCACATGTATAACTTTTAGGCAATGTGACTTCTGGAAAGTCACTTGTCTCTTGAGATTTGGTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000623036.1 |
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| CDS TCA 90 bp | CTGTTTCTTAAATTAGTTGTTGGTGGCAGGACTGTGATTAGTTTGTaGAATTTCAGCCGAATGTGCATTTTTGTGTACTCATCTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LFLKLVVGGRTVISL*NFSRMCIFVYSSVV Trigger: GACCACAGATGAGTACACAAAAATGCACATTCGGCTGAAATTTCACAAACTAATCACAGTCCTGCCACCAACAACTAATTTAAGAAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS TCA 90 bp | AAAAATCGTGCAATCGGGAAGAGAATACAAAATACTGTAGATACCTaGGTCTTCAGTGTACAGCCAAGTGGCAATATACATGTTATTAGG | + |
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Preference number: 5 (lower is better) Translates to: KNRAIGKRIQNTVDT*VFSVQPSGNIHVIR Trigger: CCTAATAACATGTATATTGCCACTTGGCTGTACACTGAAGACTCAGGTATCTACAGTATTTTGTATTCTCTTCCCGATTGCACGATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000675590.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS GCA 72 bp | TGCCTGGGGCCGAGGTGGGCGCGGCCCGGGCTCTCATaGTTTCCCTCACGCGCACCTGCCTTTTCCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: CLGPRWARPGLS*FPSRAPAFSAG Trigger: CCCCGCGGAAAAGGCAGGTGCGCGTGAGGGAAAGCATGAGAGCCCGGGCCGCGCCCACCTCGGCCCCAGGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CCA 72 bp | GACTCTGGGCAAGGGCGGGGCGCGCAGCCGATCCCCTaGAGAGGTCGGGTAGCTCAGCCAATCCCGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: DSGQGRGAQPIP*RGRVAQPIPGR Trigger: TCTTCCCGGGATTGGCTGAGCTACCCGACCTCTCCAGGGGATCGGCTGCGCGCCCCGCCCTTGCCCAGAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411630.7 |
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| CDS GCA 72 bp | CGCGGCCTGCTAAGGCTCTCAGAACTCCCGCGAGGGTaGGGGTCTTCCTCCAGCGCTGGGCTACTTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RGLLRLSELPRG*GSSSSAGLLGP Trigger: GGGACCAAGTAGCCCAGCGCTGGAGGAAGACCCGCACCCTCGCGGGAGTTCTGAGAGCCTTAGCAGGCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CAA 90 bp | CCAGGACCGCCCCCATCCGGTGATTGGCAGACACGTCTCCCAGTGTaGTCGCGGCCTGCTAAGGCTCTCAGAACTCCCGCGAGGGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: PGPPPSGDWQTRLPV*SRPAKALRTPARVR Trigger: CCGCACCCTCGCGGGAGTTCTGAGAGCCTTAGCAGGCCGCGACAACACTGGGAGACGTGTCTGCCAATCACCGGATGGGGGCGGTCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CAA 72 bp | CGCGAGGGTGCGGGTCTTCCTCCAGCGCTGGGCTACTaGGTCCCGCCCCTCAAGGTATTTCTGCTCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: REGAGLPPALGY*VPPLKVFLLLV Trigger: CACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCGCTGGAGGAAGACCCGCACCCTCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CAA 72 bp | CCCCCATCCGGTGATTGGCAGACACGTCTCCCAGTGTaGTCGCGGCCTGCTAAGGCTCTCAGAACTCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PPSGDWQTRLPV*SRPAKALRTPA Trigger: CGCGGGAGTTCTGAGAGCCTTAGCAGGCCGCGACAACACTGGGAGACGTGTCTGCCAATCACCGGATGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CAA 90 bp | CAGCGCTGGGCTACTTGGTCCCGCCCCTCAAGGTATTTCTGCTCCTaGTGTGCCAGGGACCCCGGTAGTCCTGCTCCTGCTCTGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: QRWATWSRPSRYFCS*CARDPGSPAPALDL Trigger: CAGGTCCAGAGCAGGAGCAGGACTACCGGGGTCCCTGGCACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CAA 90 bp | CAGAACTCCCGCGAGGGTGCGGGTCTTCCTCCAGCGCTGGGCTACTaGGTCCCGCCCCTCAAGGTATTTCTGCTCCTTGTGTGCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: QNSREGAGLPPALGY*VPPLKVFLLLVCQG Trigger: TCCCTGGCACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCGCTGGAGGAAGACCCGCACCCTCGCGGGAGTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 72 bp | CGCTGGGCTACTTGGTCCCGCCCCTCAAGGTATTTCTaGTCCTTGTGTGCCAGGGACCCCGGTAGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RWATWSRPSRYF*SLCARDPGSPA Trigger: AGCAGGACTACCGGGGTCCCTGGCACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CCA 72 bp | GTTTCCTTCCAGTTAAGGGGAGCCGGATTCGGACCTTaGCGACAAACAGACGCCGGGGAACCCTCCGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VSFQLRGAGFGP*RQTDAGEPSGP Trigger: GGGACCGGAGGGTTCCCCGGCGTCTGTTTGTCGCCAAGGTCCGAATCCGGCTCCCCTTAACTGGAAGGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000653147.1 |
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| CDS CCA 72 bp | GCGAGGGTGCGGGTCTTCCTCCAGCGCTGGGCTACTTaGTCCCGCCCCTCAAGGTATTTCTGCTCCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: ARVRVFLQRWAT*SRPSRYFCSLC Trigger: ACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGCCCAGCGCTGGAGGAAGACCCGCACCCTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS CCA 72 bp | GTAAGGGTCAGCTGCATTGAGTTAGCGGGGGCGGAGTaGTCCTGGGGCAGCCTGTCCCTAACAGAATCCACC | + |
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Preference number: 6 (lower is better) Translates to: VRVSCIELAGAE*SWGSLSLTEST Trigger: GGTGGATTCTGTTAGGGACAGGCTGCCCCAGGACCACTCCGCCCCCGCTAACTCAATGCAGCTGACCCTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000676262.1 |
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| CDS CAA 72 bp | TGTTTCCTTCCAGTTAAGGGGAGCCGGATTCGGACCTaGGCGACAAACAGACGCCGGGGAACCCTCCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CFLPVKGSRIRT*ATNRRRGTLRS Trigger: GGACCGGAGGGTTCCCCGGCGTCTGTTTGTCGCCAAGGTCCGAATCCGGCTCCCCTTAACTGGAAGGAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000653147.1 |
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| CDS CAA 72 bp | GCTACTTGGTCCCGCCCCTCAAGGTATTTCTGCTCCTaGTGTGCCAGGGACCCCGGTAGTCCTGCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ATWSRPSRYFCS*CARDPGSPAPA Trigger: AGCAGGAGCAGGACTACCGGGGTCCCTGGCACACAAGGAGCAGAAATACCTTGAGGGGCGGGACCAAGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 72 bp | CCTGCTACACTGCCCTGTTGCCACCAGCATTGTCACTaGTCTAGCTCCTGTGGCACTGCACGGACACGTGGT | + |
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Preference number: 6 (lower is better) Translates to: PATLPCCHQHCH*SSSCGTARTRG Trigger: ACCACGTGTCCGTGCAGTGCCACAGGAGCTAGAGCAGTGACAATGCTGGTGGCAACAGGGCAGTGTAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000675988.1 ENST00000676262.1 |
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| CDS CCA 72 bp | ATTGTCCCTGCGACGCTGCCTTCTCCCTGCCTAGGATaGATCAGCGTGGGACACAGGGTAGAAGGCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: IVPATLPSPCLG*ISVGHRVEGRG Trigger: ACCTCTGCCTTCTACCCTGTGTCCCACGCTGATCCATCCTAGGCAGGGAGAAGGCAGCGTCGCAGGGACAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 72 bp | GATTTTGGCATTGTCCCTGCGACGCTGCCTTCTCCCTaGCTAGGATGGATCAGCGTGGGACACAGGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: DFGIVPATLPSP*LGWISVGHRVE Trigger: TTCTACCCTGTGTCCCACGCTGATCCATCCTAGGCAGGGAGAAGGCAGCGTCGCAGGGACAATGCCAAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS GCA 72 bp | AGAGACCCAAGGTCAGGCCAAGTAAGTTTATTAACCTaGCAGGCTTCTCCACCAGTCGGAGGTGGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RDPRSGQVSLLT*QASPPVGGGSP Trigger: AGGGCTGCCACCTCCGACTGGTGGAGAAGCCTGGCAGGTTAATAAACTTACTTGGCCTGACCTTGGGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 72 bp | TTTCTGTCTGTGCTGCCCCTAGCCACATGTGGATTTTaGGCCATGGACGTGTTACAGGGCCTCTGCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: FLSVLPLATCGF*AMDVLQGLCPS Trigger: ACTTGGGCAGAGGCCCTGTAACACGTCCATGGCTCAAAATCCACATGTGGCTAGGGGCAGCACAGACAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 72 bp | CGCTTGAGCCTAGGGTACCAAGGCCGCAGTGAACTATaGTTGTTCCACTATACTCCATCCAGCCTGGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: RLSLGYQGRSEL*LFHYTPSSLGD Trigger: GTCACCCAGGCTGGATGGAGTATAGTGGAACAATCATAGTTCACTGCGGCCTTGGTACCCTAGGCTCAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000675590.1 ENST00000675705.1 ENST00000675988.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS GCA 72 bp | AAAGGTGAACATGAAGCACCTGCTACACTGCCCTGTTaGCACCAGCATTGTCACTGCTCTAGCTCCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: KGEHEAPATLPC*HQHCHCSSSCG Trigger: GCCACAGGAGCTAGAGCAGTGACAATGCTGGTGGCAACAGGGCAGTGTAGCAGGTGCTTCATGTTCACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000676262.1 |
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| CDS CAA 72 bp | TTTTCTGTCTGTGCTGCCCCTAGCCACATGTGGATTTaGAGCCATGGACGTGTTACAGGGCCTCTGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FSVCAAPSHMWI*SHGRVTGPLPK Trigger: CTTGGGCAGAGGCCCTGTAACACGTCCATGGCTCAAAATCCACATGTGGCTAGGGGCAGCACAGACAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 72 bp | TCATGGTTCAGCAGGCTGCACAGGGAGCATGGCTGCTaGGGCTTCAGGAAACTTACAATCATGGGGTATGTC | + |
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Preference number: 6 (lower is better) Translates to: SWFSRLHREHGC*GFRKLTIMGYV Trigger: GACATACCCCATGATTGTAAGTTTCCTGAAGCCTCAGCAGCCATGCTCCCTGTGCAGCCTGCTGAACCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 72 bp | GATAAGGCCATGGCATCTCCCTCAGCTCTTTCATGTTaGGTGAGGCCTCCCTTGCCGGCCATGTTAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: DKAMASPSALSC*VRPPLPAMLSH Trigger: ATGACTTAACATGGCCGGCAAGGGAGGCCTCACTCAACATGAAAGAGCTGAGGGAGATGCCATGGCCTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 72 bp | ACTGAGCCAAATCAAATGATGCTCCTCAGGAGGCTCTaGTGGGGAATGTGTTCCTTGGCATCTCCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TEPNQMMLLRRL*WGMCSLASPSS Trigger: GGAGCTGGGAGATGCCAAGGAACACATTCCCCATCAGAGCCTCCTGAGGAGCATCATTTGATTTGGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000676199.1 |
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| CDS TCA 72 bp | GGAGGATCGCTTGAGCCTAGGGTACCAAGGCCGCAGTaGACTATGATTGTTCCACTATACTCCATCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GGSLEPRVPRPQ*TMIVPLYSIQP Trigger: AGGCTGGATGGAGTATAGTGGAACAATCATAGTTCACTGCGGCCTTGGTACCCTAGGCTCAAGCGATCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000675590.1 ENST00000675705.1 ENST00000675988.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS CCA 72 bp | GATCTTCAAGGCCAGCATCTTCCAATCTGCTGTGTGTaGATATCCCTCAGCCTCCCTCTCATGAGGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: DLQGQHLPICCV*ISLSLPLMREL Trigger: AAGTTCCCTCATGAGAGGGAGGCTGAGGGATATCCACACACAGCAGATTGGAAGATGCTGGCCTTGAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 72 bp | AAGGTTGAAAAGGTGAACATGAAGCACCTGCTACACTaGCCTGTTGCCACCAGCATTGTCACTGCTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: KVEKVNMKHLLH*PVATSIVTALA Trigger: AGCTAGAGCAGTGACAATGCTGGTGGCAACAGGGCAGTGTAGCAGGTGCTTCATGTTCACCTTTTCAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000676262.1 |
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| CDS GCA 72 bp | CAGGAAGCACATGGCCAGAGTAGGAGGAAGGGGAGGTaGCACACTTTTAATCTAAACTCTGCCATTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QEAHGQSRRKGR*HTFNLNSAILL Trigger: CAGAAGAATGGCAGAGTTTAGATTAAAAGTGTGGCACCTCCCCTTCCTCCTACTCTGGCCATGTGCTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 72 bp | CAAGGGGCAAAGGACCACCACCAGGACTCCGTGGAGTaGTTTGTGAAACCAGTGGTTATTCTTGACAACTAT | + |
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Preference number: 6 (lower is better) Translates to: QGAKDHHQDSVE*FVKPVVILDNY Trigger: ATAGTTGTCAAGAATAACCACTGGTTTCACAAAGCACTCCACGGAGTCCTGGTGGTGGTCCTTTGCCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 72 bp | TGCTCTAGCTCCTGTGGCACTGCACGGACACGTGGTTaGTACAAGTTAGTACGCATATTTGGCCTTATTAGA | + |
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Preference number: 6 (lower is better) Translates to: CSSSCGTARTRG*YKLVRIFGLIR Trigger: TCTAATAAGGCCAAATATGCGTACTAACTTGTAGCAACCACGTGTCCGTGCAGTGCCACAGGAGCTAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000411630.7 ENST00000425653.2 ENST00000441504.2 ENST00000653147.1 ENST00000675988.1 ENST00000676262.1 |
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| CDS GCA 72 bp | CCTCCGCTCCTTAAGGGCACTTCTCTACAGCTTCACTaGTTCTCCAAACCTTTAAACACAACTATCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PPLLKGTSLQLH*FSKPLNTTILR Trigger: CCTGAGGATAGTTGTGTTTAAAGGTTTGGAGAAGCAGTGAAGCTGTAGAGAAGTGCCCTTAAGGAGCGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 72 bp | AATGGAGAGAAGCAGAGGCAGTTAGGTAAGTTTGCATaGGATGCGCAATGTAGTTCTGATGCTACAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: NGEKQRQLGKFA*DAQCSSDATGP Trigger: TGGCCCTGTAGCATCAGAACTACATTGCGCATCGCATGCAAACTTACCTAACTGCCTCTGCTTCTCTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 72 bp | AGCATGGCTGCTGAGGCTTCAGGAAACTTACAATCATaGGGTATGTCTAACAGGAAGCACATGGCCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: SMAAEASGNLQS*GMSNRKHMARV Trigger: TACTCTGGCCATGTGCTTCCTGTTAGACATACCCCATGATTGTAAGTTTCCTGAAGCCTCAGCAGCCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 72 bp | CCAAACCAAAATAGGGCTAAGCAGGAGCCTGCAGCTTaGGTGTGTATTCAGGGCATGATCCTGTTTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PNQNRAKQEPAA*VCIQGMILFCS Trigger: TGAACAAAACAGGATCATGCCCTGAATACACACCCAAGCTGCAGGCTCCTGCTTAGCCCTATTTTGGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000444958.2 ENST00000675590.1 ENST00000675705.1 ENST00000675988.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS CCA 72 bp | ACCATACTTGGGGGATTAGCCGCCGTAGTTAAATGGTaGGTTCCTGTTGTTCCCAGCCCATTTCTAGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: TILGGLAAVVKW*VPVVPSPFLAN Trigger: ATTAGCTAGAAATGGGCTGGGAACAACAGGAACCCACCATTTAACTACGGCGGCTAATCCCCCAAGTATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000676450.1 |
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| CDS TCA 72 bp | AGCAGGAGCCTGCAGCTTGGGTGTGTATTCAGGGCATaGTCCTGTTTTGTTCATTGGTCTTGGAGAAATTTC | + |
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Preference number: 6 (lower is better) Translates to: SRSLQLGCVFRA*SCFVHWSWRNF Trigger: GAAATTTCTCCAAGACCAATGAACAAAACAGGATCATGCCCTGAATACACACCCAAGCTGCAGGCTCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000444958.2 ENST00000675590.1 ENST00000675705.1 ENST00000675988.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS TCA 72 bp | CCCAGCCACACTACACATCTAAACAACCAGATCTCATaGGAACTCACTATCACAAGGAACAGCAAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PSHTTHLNNQIS*ELTITRNSKRE Trigger: TTCCCTCTTGCTGTTCCTTGTGATAGTGAGTTCTCATGAGATCTGGTTGTTTAGATGTGTAGTGTGGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000623036.1 |
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| CDS CCA 72 bp | CTGACTAGACCCTCTGTAATATGGTGGGAACTAAGGTaGACTTTACAGAATGGAGAGAAGCAGAGGCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: LTRPSVIWWELR*TLQNGEKQRQL Trigger: TAACTGCCTCTGCTTCTCTCCATTCTGTAAAGTCCACCTTAGTTCCCACCATATTACAGAGGGTCTAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 72 bp | AAGGTCAAGCACCTGACTAGACCCTCTGTAATATGGTaGGAACTAAGGTGGACTTTACAGAATGGAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KVKHLTRPSVIW*ELRWTLQNGEK Trigger: CTTCTCTCCATTCTGTAAAGTCCACCTTAGTTCCCACCATATTACAGAGGGTCTAGTCAGGTGCTTGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CCA 72 bp | CAAAAGGTCAAGCACCTGACTAGACCCTCTGTAATATaGTGGGAACTAAGGTGGACTTTACAGAATGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: QKVKHLTRPSVI*WELRWTLQNGE Trigger: CTCTCCATTCTGTAAAGTCCACCTTAGTTCCCACCATATTACAGAGGGTCTAGTCAGGTGCTTGACCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS GCA 72 bp | TATTTTCCGCGTTGCTCTCAATACCTCGTGGATCTCTaGTTCTCTAAGTCTGAAACCACACTAGAAACACAG | + |
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Preference number: 6 (lower is better) Translates to: YFPRCSQYLVDL*FSKSETTLETQ Trigger: CTGTGTTTCTAGTGTGGTTTCAGACTTAGAGAAGCAGAGATCCACGAGGTATTGAGAGCAACGCGGAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS TCA 72 bp | GCTTCTAGGAAGATTTTTATCTCCTGCTATTGTGGCTaGAGATCTCATGGAGGCCAAACCAAAATAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: ASRKIFISCYCG*RSHGGQTKIGL Trigger: TAGCCCTATTTTGGTTTGGCCTCCATGAGATCTTCAGCCACAATAGCAGGAGATAAAAATCTTCCTAGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000444958.2 ENST00000675590.1 ENST00000675705.1 ENST00000675988.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS TCA 72 bp | CGGTCATCCAGTCACCCACAGAATCCAATTAAATGCTaGGAGCCAGAAATTCGGTTTTCTCAAATAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: RSSSHPQNPIKC*EPEIRFSQIAN Trigger: ATTGGCTATTTGAGAAAACCGAATTTCTGGCTCTCAGCATTTAATTGGATTCTGTGGGTGACTGGATGACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000444958.2 ENST00000675590.1 ENST00000675705.1 ENST00000675988.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS GCA 72 bp | ATGAAACTTGAGTTATCACTAATCCATTTCTTTACCTaGTACACTGCCCTGTTGCCACCAGCATTGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: MKLELSLIHFFT*YTALLPPALSL Trigger: CAGTGACAATGCTGGTGGCAACAGGGCAGTGTAGCAGGTAAAGAAATGGATTAGTGATAACTCAAGTTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623036.1 ENST00000675988.1 |
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| CDS GCA 72 bp | TTTGATTTTTACAGGGTTCACTACTATTTTCCGCGTTaGTCTCAATACCTCGTGGATCTCTGCTTCTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: FDFYRVHYYFPR*SQYLVDLCFSK Trigger: CTTAGAGAAGCAGAGATCCACGAGGTATTGAGAGCAACGCGGAAAATAGTAGTGAACCCTGTAAAAATCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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| CDS CAA 90 bp | CAGGACACCAAATCTCAAGAGACAAGTGACTTTCCAGAAGTCACATaGCCTAAAAGTTATACATGTGAAGCCTCTCATTCAGAGATACTC | + |
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Preference number: 6 (lower is better) Translates to: QDTKSQETSDFPEVT*PKSYTCEASHSEIL Trigger: GAGTATCTCTGAATGAGAGGCTTCACATGTATAACTTTTAGGCAATGTGACTTCTGGAAAGTCACTTGTCTCTTGAGATTTGGTGTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000623036.1 |
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| CDS TCA 72 bp | CGACCCTTTTGTAGGTGGGAAAATAGCAGGCTAAGATaGTATAGCACTGAAATCTTTATCAGCTTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RPFCRWENSRLR*YSTEIFISFSK Trigger: TTTGGAGAAGCTGATAAAGATTTCAGTGCTATATCATCTTAGCCTGCTATTTTCCCACCTACAAAAGGGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000675590.1 ENST00000675988.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS TCA 72 bp | GCAATCGGGAAGAGAATACAAAATACTGTAGATACCTaGGTCTTCAGTGTACAGCCAAGTGGCAATATACAT | + |
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Preference number: 6 (lower is better) Translates to: AIGKRIQNTVDT*VFSVQPSGNIH Trigger: ATGTATATTGCCACTTGGCTGTACACTGAAGACTCAGGTATCTACAGTATTTTGTATTCTCTTCCCGATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000675590.1 ENST00000676012.1 ENST00000676450.1 |
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| CDS GCA 72 bp | AATCTCAAGAGACAAGTGACTTTCCAGAAGTCACATTaGCTAAAAGTTATACATGTGAAGCCTCTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: NLKRQVTFQKSH*LKVIHVKPLIQ Trigger: CTGAATGAGAGGCTTCACATGTATAACTTTTAGGCAATGTGACTTCTGGAAAGTCACTTGTCTCTTGAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000623036.1 |
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| CDS CAA 90 bp | GAAGAGTTTATATTCTTAACAGCTCGACTGTGGTCCTTTCCTAGTTaGGTTGAAATAATTCTTAACTGTTACACCAGGACACCAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: EEFIFLTARLWSFPS*VEIILNCYTRTPNL Trigger: GAGATTTGGTGTCCTGGTGTAACAGTTAAGAATTATTTCAACCAAACTAGGAAAGGACCACAGTCGAGCTGTTAAGAATATAAACTCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441504.2 ENST00000623036.1 |
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| CDS GCA 72 bp | TATGTGCTGACCCCACATATTTTAGCCACATGCACATaGTCATGTATCTCAAGATTAAAGTCTAAATACATT | + |
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Preference number: 6 (lower is better) Translates to: YVLTPHILATCT*SCISRLKSKYI Trigger: AATGTATTTAGACTTTAATCTTGAGATACATGAGCATGTGCATGTGGCTAAAATATGTGGGGTCAGCACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441504.2 |
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