RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAGLB (Homo sapiens)

Ensembl gene IDs: ENSG00000164535

Ensembl transcript IDs: ENST00000297056.11, ENST00000425398.6, ENST00000432248.1, ENST00000436575.5, ENST00000454738.5, ENST00000462934.5, ENST00000479922.6, ENST00000482149.5, ENST00000483716.1, ENST00000497308.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGCATGGTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGGCTGTaGCCCACTATGACCAGCCGGTACTCAGGAGCAATGCTGAAGGCT +
Preference number: 1 (lower is better)
Translates to: LSMVASRAAAPPPRL*PTMTSRYSGAMLKA
Trigger: AGCCTTCAGCATTGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGGGGCGGCCGCCCTGCTGGCCACCATGCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR CCA 90 bp ATCCATCCACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTaGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTTC +
Preference number: 1 (lower is better)
Translates to: IHPRARASRGCLHGR*VSGVVLSPERAHYF
Trigger: GAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTGGATGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR CCA 90 bp GAACTGTTCACGGTCTTCTGGGTGGGCCCTGGATTCCCGCACTTCTaGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: ELFTVFWVGPGFPHF*SSPQTAKGSIHGPG
Trigger: CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
3UTR CCA 90 bp TGCCTTGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTGGGTaGGCCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCA +
Preference number: 1 (lower is better)
Translates to: CLGGGRLRNCSRSSG*ALDSRTSGAVLRQP
Trigger: TGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297056.11
3UTR CCA 90 bp GAGCTGCCTTGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTaGGTGGGCCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACA +
Preference number: 1 (lower is better)
Translates to: ELPWGWEAKELFTVF*VGPGFPHFWSSPQT
Trigger: TGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCAAGGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297056.11
3UTR TCA 90 bp CGCACCCTCACCACAGTTCCATTTGTACATCCAGGAAGCCCAGTTTaGAAAACAAACCACGCCTGTAAACTGAGTTGGATGAAAAGAGCT +
Preference number: 1 (lower is better)
Translates to: RTLTTVPFVHPGSPV*KTNHACKLSWMKRA
Trigger: AGCTCTTTTCATCCAACTCAGTTTACAGGCGTGGTTTGTTTTTCAAACTGGGCTTCCTGGATGTACAAATGGAACTGTGGTGAGGGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297056.11
3UTR CCA 90 bp ATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATaGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGT +
Preference number: 1 (lower is better)
Translates to: IMATMTSHKLKSLRP*NSVPIRFLLMDIRC
Trigger: ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR-3UTR GCA 90 bp GCTCTGAGCATGGTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGGCTGTGGCCCTGTGCCAGGCGGTCCTaGACCTCACACTCCACGTCC +
Preference number: 2 (lower is better)
Translates to: ALSMVASRAAAPPPRLWPCARRS*TSHSTS
Trigger: GGACGTGGAGTGTGAGGTGCAGGACCGCCTGGCACA...GGGCCACAGCCTCGGGGGCGGGGCGGCCGCCCTGCTGGCCACCATGCTCAGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR-3UTR CCA 90 bp CGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGCATCCTGCAGAGACATaGTCCCCCTCACAGCGACCA +
Preference number: 2 (lower is better)
Translates to: RVGGSEHGGQQGGRPAPEHPAET*SPSQRP
Trigger: TGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATG...CTCGGGGGCGGGGCGGCCGCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR-3UTR TCA 90 bp GCCGCCCCGCCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAACGTATCTGGCAGCTTaGGAAATACCCTTGTGTGCC +
Preference number: 2 (lower is better)
Translates to: AAPPPRLWPTMTSRYSGATYLAA*EIPLCA
Trigger: GGCACACAAGGGTATTTCTCAAGCTGCCAGATACGT...TGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGGGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR-3UTR TCA 90 bp GGCGTAGCACCTGACCTGCGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCACTCAGGAGCAATGCTaGAGGCTTGGCTCAAAATCC +
Preference number: 2 (lower is better)
Translates to: GVAPDLRVGGSEHGGQQGTQEQC*RLGSKS
Trigger: GGATTTTGAGCCAAGCCTTCAGCATTGCTCCTGAGT...GCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGCAGGTCAGGTGCTACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR-3UTR CCA 90 bp ACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTGGACATTCGCTGTTTTaGCGTCATGGGAACTCCTCG +
Preference number: 2 (lower is better)
Translates to: TGQGFPRLSPRSLGLRSRGHSLF*RHGNSS
Trigger: CGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCC...ACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR TCA 90 bp GCTGTGGCTCGGCGGGGCCGGGGGCTCCACTTACTTTCCCGATCGGGTTTCGTCTTAAGGACAAAAGCGTaGGTCCATCGTTCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: AVARRGRGLHLLSRSGFVLRTKA*VHRSWD
Trigger: GTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAA...GACGAAACCCGATCGGGAAAGTAAGTGGAGCCCCCGGCCCCGCCGAGCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297056.11
3UTR-3UTR TCA 90 bp CCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAATGCTGAAGCACCTCACTCTCCGCTaGCAGGTCCGTAAGGACATC +
Preference number: 2 (lower is better)
Translates to: PPRLWPTMTSRYSGAMLKHLTLR*QVRKDI
Trigger: GATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTG...CTTCAGCATTGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR-3UTR TCA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGTTAAGGACAAAAGCGTaGGTCCATCGTTCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPLRTKA*VHRSWD
Trigger: GTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAA...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR CCA 90 bp CGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGGACATTCGCTGTTTTaGCGTCATGGGAACTCCTCG +
Preference number: 2 (lower is better)
Translates to: RGCLHGRWVSGVVLSPERGHSLF*RHGNSS
Trigger: CGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCC...ACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR TCA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCCATCCGATTCCTGTTaGTGGACATTCGCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGPSDSC*WTFAVL
Trigger: CAAAACAGCGAATGTCCATCAACAGGAATCGGATGG...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR GCA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGCGTGCTCACTACTTCTaGTACCATTATGGCCACAAT +
Preference number: 2 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPRAHYF*YHYGHN
Trigger: ATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACG...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR CCA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAAGTCATTGAGACCATaGAATTCTGTTCCCATCCGA +
Preference number: 2 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLKSLRP*NSVPIR
Trigger: TCGGATGGGAACAGAATTCCATGGTCTCAATGACTT...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR TCA 90 bp CCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTTAAGGACAAAAGCGTaGGTCCATCGTTCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PVDGHSLFWRHGNSSDGKLRTKA*VHRSWD
Trigger: GTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAA...CTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR-3UTR CCA 90 bp CACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATGGACATTCGCTGTTTTaGCGTCATGGGAACTCCTCG +
Preference number: 2 (lower is better)
Translates to: HLSVLTTSATIMATMTSHGHSLF*RHGNSS
Trigger: CGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCC...ATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR-3UTR TCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACACCATCCGATTCCTGTTaGTGGACATTCGCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: ESSYHLSVLTTSATIMATPSDSC*WTFAVL
Trigger: CAAAACAGCGAATGTCCATCAACAGGAATCGGATGG...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR CAA 90 bp AGCAATGCTGAAGGCTTGGCTCAAAATCCCGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGCTTGAGAAATACCCTTGTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: SNAEGLAQNPVVDES*VNVSGSLRNTLVCQ
Trigger: CTGGCACACAAGGGTATTTCTCAAGCTGCCAGATACGTTTACCAACGACTCATCAACGACGGGATTTTGAGCCAAGCCTTCAGCATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR CAA 90 bp CTTAAGTCATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTaGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATG +
Preference number: 2 (lower is better)
Translates to: LKSLRPWNSVPIRFL*MDIRCFGVMGTPRM
Trigger: CATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR CAA 90 bp TCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATaGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGAC +
Preference number: 2 (lower is better)
Translates to: SATIMATMTSHKLKS*RPWNSVPIRFLLMD
Trigger: GTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR CCA 72 bp GTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGGCTGTaGCCCACTATGACCAGCCGGTACTCAGGAGCAATG +
Preference number: 3 (lower is better)
Translates to: VASRAAAPPPRL*PTMTSRYSGAM
Trigger: CATTGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGGGGCGGCCGCCCTGCTGGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR-3UTR CAA 90 bp CGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGAACGTATCTGGCAGCTaGAGAAATACCCTTGTGTGC +
Preference number: 3 (lower is better)
Translates to: RVGGSEHGGQQGGRPAPENVSGS*RNTLVC
Trigger: GCACACAAGGGTATTTCTCAAGCTGCCAGATACGTT...CTCGGGGGCGGGGCGGCCGCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR CCA 72 bp CGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTaGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCT +
Preference number: 3 (lower is better)
Translates to: RARASRGCLHGR*VSGVVLSPERA
Trigger: AGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR CCA 72 bp ACGGTCTTCTGGGTGGGCCCTGGATTCCCGCACTTCTaGAGCAGTCCTCAGACAGCCAAGGGATCCATCCAC +
Preference number: 3 (lower is better)
Translates to: TVFWVGPGFPHF*SSPQTAKGSIH
Trigger: GTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCCAGAAGACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
3UTR CCA 72 bp TGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTaGGTGGGCCCTGGATTCCCGCACTTCTGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: WGWEAKELFTVF*VGPGFPHFWSS
Trigger: ACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297056.11
3UTR-3UTR CAA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGTGGACATTCGCTGTTTaGGCGTCATGGGAACTCCTC +
Preference number: 3 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGWTFAV*ASWELL
Trigger: GAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCA...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR CAA 90 bp CCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGCCCATCCGATTCCTGTaGATGGACATTCGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: PALLEQSSDSQGIHPRARPIRFL*MDIRCF
Trigger: AAAACAGCGAATGTCCATCAACAGGAATCGGATGGG...CCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR TCA 72 bp CACCTCACACTCCACGTCCAGCACCTCACTCTCCGCTaGCAGGTCCGTAAGGACATCCTGCAGAGACATGGT +
Preference number: 3 (lower is better)
Translates to: HLTLHVQHLTLR*QVRKDILQRHG
Trigger: ACCATGTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGTGGAGTGTGAGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
3UTR TCA 72 bp CCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTaGGCGTGCTCACTACTTCTGCTACCATTATGGCCA +
Preference number: 3 (lower is better)
Translates to: PRSLGLRSRPIT*ACSLLLLPLWP
Trigger: TGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR-3UTR CAA 90 bp TGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATCCCATCCGATTCCTGTaGATGGACATTCGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: WVSGVVLSPERAHYFCYHPIRFL*MDIRCF
Trigger: AAAACAGCGAATGTCCATCAACAGGAATCGGATGGG...ATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR CCA 72 bp TCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTaGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTT +
Preference number: 3 (lower is better)
Translates to: SHPIPVDGHSLF*RHGNSSDGKSV
Trigger: AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR CCA 72 bp ACAATGACTTCCCATAAACTTAAGTCATTGAGACCATaGAATTCTGTTCCCATCCGATTCCTGTTGATGGAC +
Preference number: 3 (lower is better)
Translates to: TMTSHKLKSLRP*NSVPIRFLLMD
Trigger: GTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GCTCTGAGCATGGTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGGCTGTGGCCCAGACCAAGTCGTCGCTaGCGATGGCCCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ALSMVASRAAAPPPRLWPRPSRR*RWPSAG
Trigger: GCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCT...GGGCCACAGCCTCGGGGGCGGGGCGGCCGCCCTGCTGGCCACCATGCTCAGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp CGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGCAGCTGGGAGCTCCCTaGGGCATGGCAGACCACCTG +
Preference number: 4 (lower is better)
Translates to: RVGGSEHGGQQGGRPAPEQLGAP*GMADHL
Trigger: CAGGTGGTCTGCCATGCCCCAGGGAGCTCCCAGCTG...CTCGGGGGCGGGGCGGCCGCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp GCCGCCCCGCCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAAGAAGGCGTAGCACCTaGCCTGCGGGTAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: AAPPPRLWPTMTSRYSGARRRST*PAGRRL
Trigger: GAGCCGCCTACCCGCAGGTCAGGTGCTACGCCTTCT...TGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGGGGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp GCTCTGAGCATGGTGGCCAGCAGGGCGGCCGCCCCGCCCCCGAGGCTGTGGCCCCAGCTCGAAGAACCCTaGGAAGACCAAGTCGTCGCT +
Preference number: 4 (lower is better)
Translates to: ALSMVASRAAAPPPRLWPQLEEP*EDQVVA
Trigger: AGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTG...GGGCCACAGCCTCGGGGGCGGGGCGGCCGCCCTGCTGGCCACCATGCTCAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp GGCGTAGCACCTGACCTGCGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCTGTGCCAGGCGGTCCTaGACCTCACACTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: GVAPDLRVGGSEHGGQQGCARRS*TSHSTS
Trigger: GGACGTGGAGTGTGAGGTGCAGGACCGCCTGGCACA...GCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGCAGGTCAGGTGCTACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp GGCGTAGCACCTGACCTGCGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCCTGGGAGGTGGAGCTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: GVAPDLRVGGSEHGGQQGLGGGA*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAAGCTCCACCTCCCAG...GCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGCAGGTCAGGTGCTACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGCCGCCCCCGAGGCTGTaGCCCACTATGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLPPPRL*PTMTSR
Trigger: CCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGG...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CAACTCGGGAGGCTGAGGCAGAAGAACCGCCTGAACCTGGGAGGTGGAGCTTGCCCGCCCCCGAGGCTGTaGCCCACTATGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QLGRLRQKNRLNLGGGACPPPRL*PTMTSR
Trigger: CCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGG...GCAAGCTCCACCTCCCAGGTTCAGGCGGTTCTTCTGCCTCAGCCTCCCGAGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGTCGTCGCTGGCGATaGCCCAGCGCCGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLSRRWR*PSAGRR
Trigger: TCTTCGGCCGGCGCTGGGCCATCGCCAGCGACGACT...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp GGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCGCATGGCAGACCACCTaGGCAGGCTCTTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GPGLPEAVSTVAGSQESSAWQTT*AGSWLF
Trigger: GAACAACCAAGAGCCTGCCCAGGTGGTCTGCCATGC...GGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp GGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCGGAGACCCCTTGTGCTaGACAGGAGACGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GFPRLSPRSLGLRSRPITGDPLC*TGDAGR
Trigger: GCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCC...GGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp GGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCGGCTGTGGCCCACTATaGCCAGCCGGTACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GFPRLSPRSLGLRSRPITGCGPL*PAGTQE
Trigger: CTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCC...GGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp ACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACGCGGGTAGGCGGCTCTaGGCATGGTGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSSTSLSADRSVRTSCRDAGRRL*AWWPAG
Trigger: CCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGC...GTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp CACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGAGAAATACCCTTGTGTaGCAGGCGGTCCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: HGPGLPEAVSTVAGSQESRNTLV*QAVLHL
Trigger: GAGGTGCAGGACCGCCTGGCACACAAGGGTATTTCT...CGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp GCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTAATTCCTGCAGAGCTTTaGTCCACAGCCCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: ARASRGCLHGRWVSGVVLIPAEL*STAPGV
Trigger: CACCCCGGGGGCTGTGGAGCAAAGCTCTGCAGGAAT...TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp GCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTACGCGTCAGTAGGCTCTaGTCCCCCAGAAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ARASRGCLHGRWVSGVVLRVSRL*SPRRGC
Trigger: ACAGCCTCTTCTGGGGGAGCAGAGCCTACTGACGCG...TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp TGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTGGGTGGGCCCTGGATTCAGACCAAGTCGTCGCTaGCGATGGCCCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: WGWEAKELFTVFWVGPGFRPSRR*RWPSAG
Trigger: GCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCT...GAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp GCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTAAGGCCACGTCCACACTaGAGACCCCTTGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ARASRGCLHGRWVSGVVLRPRPH*RPLVLD
Trigger: GTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCT...TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp GCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTACACCTCACTCTCCGCTaGCAGGTCCGTAAGGACATC +
Preference number: 4 (lower is better)
Translates to: ARASRGCLHGRWVSGVVLHLTLR*QVRKDI
Trigger: GATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTG...TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACCAGGGCTGCCCTTGGTaGCGCCCAGGAGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: LHGRWVSGVVLSPERAHYQGCPW*RPGENP
Trigger: GGGGTTTTCTCCTGGGCGTCACCAAGGGCAGCCCTG...GTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp GGCGTAGCACCTGACCTGCGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCGCCTGGCCAACATGGTaGAACCCCACCACTACTAAA +
Preference number: 4 (lower is better)
Translates to: GVAPDLRVGGSEHGGQQGAWPTW*NPTTTK
Trigger: TTTAGTAGTGGTGGGGTTTCACCATGTTGGCCAGGC...GCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGCAGGTCAGGTGCTACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp GGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCCTGTGGTTCTGCTTCTaGAGCAGTCACCACCAATCC +
Preference number: 4 (lower is better)
Translates to: GPGLPEAVSTVAGSQESSLWFCF*SSHHQS
Trigger: GGATTGGTGGTGACTGCTGCAGAAGCAGAACCACAG...GGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR GCA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGACTGGAGACCCCTTGTaGTGGACAGGAGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGTGDPL*WTGDAG
Trigger: GCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGT...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CAACTCGGGAGGCTGAGGCAGAAGAACCGCCTGAACCTGGGAGGTGGAGCTTGCGTACCATCCCCGGCATaGCGAAGGTCCCGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: QLGRLRQKNRLNLGGGACVPSPA*RRSRSS
Trigger: CGAGCTACGGGACCTTCGCCATGCCGGGGATGGTAC...GCAAGCTCCACCTCCCAGGTTCAGGCGGTTCTTCTGCCTCAGCCTCCCGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp TCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACATGGTCCCCCTCCCACAGCCCCCGGGGTaGGGAGAAGGCGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: SLSADRSVRTSCRDMVPLPQPPG*GEGVAP
Trigger: AGGTGCTACGCCTTCTCCCCACCCCGGGGGCTGTGG...GAGGGGGACCATGTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCCCCGTCCAGCTCCGTaGGCAAGTTGTTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGPRPAP*ASCWGF
Trigger: GAAACCCCAACAACTTGCCCACGGAGCTGGACGGGG...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGAGCCGAAGTGACAGTTaGGCTGATCGCCTCCGACCA +
Preference number: 4 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGSRSDS*ADRLRP
Trigger: TGGTCGGAGGCGATCAGCTCAACTGTCACTTCGGCT...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CAGCCAGAGCCCAGGGCTGCCCTTGGTGACGCCCAGGAGAAAACCCCAGCCCGCACGTATCTGGCAGCTTaGGAAATACCCTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: QPEPRAALGDAQEKTPARTYLAA*EIPLCA
Trigger: GGCACACAAGGGTATTTCTCAAGCTGCCAGATACGT...GCGGGCTGGGGTTTTCTCCTGGGCGTCACCAAGGGCAGCCCTGGGCTCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp GGCGTAGCACCTGACCTGCGGGTAGGCGGCTCTGAGCATGGTGGCCAGCAGGGCACGTATCTGGCAGCTTaGGAAATACCCTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GVAPDLRVGGSEHGGQQGTYLAA*EIPLCA
Trigger: GGCACACAAGGGTATTTCTCAAGCTGCCAGATACGT...GCCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGCAGGTCAGGTGCTACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp CACTCCACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCGGCTGTGGCCCACTATaGCCAGCCGGTACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HSTSSTSLSADRSVRTSCGCGPL*PAGTQE
Trigger: CTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCC...GCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp CCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCAAGAAGGCGTAGCACCTaGCCTGCGGGTAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PWIPALLEQSSDSQGIHPRRRST*PAGRRL
Trigger: GAGCCGCCTACCCGCAGGTCAGGTGCTACGCCTTCT...TGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp GCCGGGGGCTCCACTTACTTTCCCGATCGGGTTTCGTCTTCATCCCCAGCCAGACCTCCTGCAGGTGGATaGTCCTGCCGGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: AGGSTYFPDRVSSSSPARPPAGG*SCREGR
Trigger: TCTACCCTCCCGGCAGGATCATCCACCTGCAGGAGG...TCTGGCTGGGGATGAAGACGAAACCCGATCGGGAAAGTAAGTGGAGCCCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp CACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTTAAGGACAAAAGCGTaGGTCCATCGTTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: HGPGLPEAVSTVAGSQESLRTKA*VHRSWD
Trigger: GTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAA...CGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp CACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGACTGACCACGACGGTTaGGATGATGCCGTTTACAAC +
Preference number: 4 (lower is better)
Translates to: HGPGLPEAVSTVAGSQESTDHDG*DDAVYN
Trigger: GTTGTAAACGGCATCATCGCAACCGTCGTGGTCAGT...CGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp CTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACGTACCATCCCCGGCATaGCGAAGGTCCCGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: LHGRWVSGVVLSPERAHYVPSPA*RRSRSS
Trigger: CGAGCTACGGGACCTTCGCCATGCCGGGGATGGTAC...GTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CAGCCAGAGCCCAGGGCTGCCCTTGGTGACGCCCAGGAGAAAACCCCAGCCCGCGCAATGCTGAAGGCTTaGCTCAAAATCCCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: QPEPRAALGDAQEKTPARAMLKA*LKIPSL
Trigger: CAACGACGGGATTTTGAGCCAAGCCTTCAGCATTGC...GCGGGCTGGGGTTTTCTCCTGGGCGTCACCAAGGGCAGCCCTGGGCTCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp CCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAATGCTGAAGCCGCCGCAATGTCGCTaGGCACCAGATCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPRLWPTMTSRYSGAMLKPPQCR*APDLCP
Trigger: AGGACACAGATCTGGTGCCCAGCGACATTGCGGCGG...CTTCAGCATTGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp TCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTCAGCTGGGAGCTCCCTaGGGCATGGCAGACCACCTG +
Preference number: 4 (lower is better)
Translates to: STVAGSQESSYHLSVLTTQLGAP*GMADHL
Trigger: CAGGTGGTCTGCCATGCCCCAGGGAGCTCCCAGCTG...AGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425398.6
CDS-3UTR TCA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGCTTCCCCAGGACGAGTaGCACGATGAAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPLPQDE*HDEALR
Trigger: TCTCAGAGCTTCATCGTGTCACTCGTCCTGGGGAAG...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAATGCTGAAGGCATGGCAGACCACCTaGGCAGGCTCTTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PPRLWPTMTSRYSGAMLKAWQTT*AGSWLF
Trigger: GAACAACCAAGAGCCTGCCCAGGTGGTCTGCCATGC...CTTCAGCATTGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp CCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAATGCTGAAGCATCCTGCAGAGACATaGTCCCCCTCACAGCGACCA +
Preference number: 4 (lower is better)
Translates to: PPRLWPTMTSRYSGAMLKHPAET*SPSQRP
Trigger: TGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATG...CTTCAGCATTGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp GGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCACAGACTCTTTCCTGTaGTCCAGAGCCACTAAAAAC +
Preference number: 4 (lower is better)
Translates to: GPGLPEAVSTVAGSQESSTDSFL*SRATKN
Trigger: GTTTTTAGTGGCTCTGGATCACAGGAAAGAGTCTGT...GGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CACTCCACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCCACCTCACTCTCCGCTaGCAGGTCCGTAAGGACATC +
Preference number: 4 (lower is better)
Translates to: HSTSSTSLSADRSVRTSCHLTLR*QVRKDI
Trigger: GATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTG...GCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGTGGAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGGAATTCCGCTTCGTGTaGCCACTTGGCGCTATAGTG +
Preference number: 4 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPEFRFV*PLGAIV
Trigger: CACTATAGCGCCAAGTGGTCACACGAAGCGGAATTC...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp ACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCATCCGATTCCTGTTaGTGGACATTCGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TGQGFPRLSPRSLGLRSRPSDSC*WTFAVL
Trigger: CAAAACAGCGAATGTCCATCAACAGGAATCGGATGG...ACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp GGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTCCAGCTTTCCTCTGTaGATGAGATACAACGTCAGA +
Preference number: 4 (lower is better)
Translates to: GPGLPEAVSTVAGSQESSSSFPL*MRYNVR
Trigger: TCTGACGTTGTATCTCATGCACAGAGGAAAGCTGGA...GGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp GCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTACCACACGCTTGTAGCTaGTGTCTTGAGGCCATTAAG +
Preference number: 4 (lower is better)
Translates to: ARASRGCLHGRWVSGVVLPHACS*CLEAIK
Trigger: CTTAATGGCCTCAAGACAGCAGCTACAAGCGTGTGG...TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR GCA 90 bp CCCAGGAGAAAACCCCAGCCCGCACCCTCACCACAGTTCCATTTGTACATCCAGTGTGCCAGGCGGTCCTaGACCTCACACTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: PRRKPQPAPSPQFHLYIQCARRS*TSHSTS
Trigger: GGACGTGGAGTGTGAGGTGCAGGACCGCCTGGCACA...CTGGATGTACAAATGGAACTGTGGTGAGGGTGCGGGCTGGGGTTTTCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGCAGCTCGAAGAACCCTaGGAAGACCAAGTCGTCGCT +
Preference number: 4 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLQLEEP*EDQVVA
Trigger: AGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTG...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CCAGAGCCCAGGGCTGCCCTTGGTGACGCCCAGGAGAAAACCCCAGCCCGCACCAAAGCAACCCGAGTATaGTCGTCTTTCCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: PEPRAALGDAQEKTPARTKATRV*SSFPMQ
Trigger: TTGCATTGGGAAAGACGACCATACTCGGGTTGCTTT...GGTGCGGGCTGGGGTTTTCTCCTGGGCGTCACCAAGGGCAGCCCTGGGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp CCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACCGCCGCAATGTCGCTaGGCACCAGATCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PWIPALLEQSSDSQGIHPPPQCR*APDLCL
Trigger: CAGACACAGATCTGGTGCCCAGCGACATTGCGGCGG...TGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp ACTTACTTTCCCGATCGGGTTTCGTCTTCATCCCCAGCCAGAGCCCAGGGCTGCTCCAGATCAGCTTCCTaGGAGCTCCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: TYFPDRVSSSSPARAQGCSRSAS*ELPGAW
Trigger: CCATGCCCCAGGGAGCTCCCAGGAAGCTGATCTGGA...GCAGCCCTGGGCTCTGGCTGGGGATGAAGACGAAACCCGATCGGGAAAGTAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGGGACATTCGCTGTTTTaGCGTCATGGGAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPGHSLF*RHGNSS
Trigger: CGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCC...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGGGACATTCGCTGTTTTaGCGTCATGGGAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGGHSLF*RHGNSS
Trigger: CGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCC...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp TGGGCCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCAGGATTCCCGCACTTCTaGAGCAGTCCTCAGACAGCC +
Preference number: 4 (lower is better)
Translates to: WALDSRTSGAVLRQPRDPGFPHF*SSPQTA
Trigger: GGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCC...TGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp TCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTACTGTCCTGTCGCACTaGACACCATCTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: STVAGSQESSYHLSVLTTTVLSH*TPSATQ
Trigger: CTGGGTGGCAGATGGTGTTCAGTGCGACAGGACAGT...AGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp TGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATAGAAGGCGTAGCACCTaGCCTGCGGGTAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: WVSGVVLSPERAHYFCYHRRRST*PAGRRL
Trigger: GAGCCGCCTACCCGCAGGTCAGGTGCTACGCCTTCT...ATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp GCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTAGATACAACGTCAGAATaGCAATCCACCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: ARASRGCLHGRWVSGVVLDTTSE*QSTTAL
Trigger: GAGTGCTGTGGTGGATTGGCATTCTGACGTTGTATC...TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp CGTAAGGACATCCTGCAGAGACATGGTCCCCCTCACAGCGACCACAACAGACTCCTGTGGTTCTGCTTCTaGAGCTGGGAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RKDILQRHGPPHSDHNRLLWFCF*SWELPG
Trigger: CCCAGGGAGCTCCCAGCTGCAGAAGCAGAACCACAG...GAGTCTGTTGTGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATGTCCTTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp CCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAATGCTGAAGCATAGTCTGTGGTTCTaGTTCTGCAGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PPRLWPTMTSRYSGAMLKHSLWF*FCSWEL
Trigger: GAGCTCCCAGCTGCAGAAGCAGAACCACAGACTATG...CTTCAGCATTGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp CACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCCATCCTGCAGAGACATaGTCCCCCTCACAGCGACCA +
Preference number: 4 (lower is better)
Translates to: HGRWVSGVVLSPERAHYFHPAET*SPSQRP
Trigger: TGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATG...GAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGGTTGGTAAACGTATCTaGCAGCTTGAGAAATACCCT +
Preference number: 4 (lower is better)
Translates to: HGPGLPEAVSTVAGSQESVGKRI*QLEKYP
Trigger: AGGGTATTTCTCAAGCTGCCAGATACGTTTACCAAC...CGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp GGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTCCGCCCCCGAGGCTGTaGCCCACTATGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GVMGTPRMVSQFKDKSVSPPPRL*PTMTSR
Trigger: CCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGG...ACTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATCCAGTGGGGAGTCGCTaGAGAAGCTGTAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: WVSGVVLSPERAHYFCYHPVGSR*RSCRPG
Trigger: CCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGG...ATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGCTTCGTGTGACCACTTaGCGCTATAGTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLLRVTT*RYSEQQ
Trigger: CTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAG...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGAAGTCATTGAGACCATaGAATTCTGTTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: HGPGLPEAVSTVAGSQESKSLRP*NSVPIR
Trigger: TCGGATGGGAACAGAATTCCATGGTCTCAATGACTT...CGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACAACTGGCTTGAATCATaGCTATCCAGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LHGRWVSGVVLSPERAHYNWLES*LSRWLG
Trigger: CCCCAGCCACCTGGATAGTCATGATTCAAGCCAGTT...GTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp ACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTAGCCGAAGTGACAGTTaGGCTGATCGCCTCCGACCA +
Preference number: 4 (lower is better)
Translates to: TVAGSQESSYHLSVLTTSSRSDS*ADRLRP
Trigger: TGGTCGGAGGCGATCAGCTCAACTGTCACTTCGGCT...AGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CGTAAGGACATCCTGCAGAGACATGGTCCCCCTCACAGCGACCACAACAGACTCAGCCGAAGTGACAGTTaGGCTGATCGCCTCCGACCA +
Preference number: 4 (lower is better)
Translates to: RKDILQRHGPPHSDHNRLSRSDS*ADRLRP
Trigger: TGGTCGGAGGCGATCAGCTCAACTGTCACTTCGGCT...GAGTCTGTTGTGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATGTCCTTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp ATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTGCGGGTAGGCGGCTCTaGGCATGGTGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MDIRCFGVMGTPRMVSQFAGRRL*AWWPAG
Trigger: CCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGC...AAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGGACACGATGAAGCTCTaGGAATATTCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGDTMKL*EYSCRA
Trigger: AGCTCTGCAGGAATATTCTCAGAGCTTCATCGTGTC...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGAGACACGATGAAGCTCTaGGAATATTCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LEQSSDSQGIHPRARASRDTMKL*EYSCRA
Trigger: AGCTCTGCAGGAATATTCTCAGAGCTTCATCGTGTC...TCGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp GCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTTAAGGACAAAAGCGTaGGTCCATCGTTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ALLEQSSDSQGIHPRARALRTKA*VHRSWD
Trigger: GTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAA...AGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGACCATCCGATTCCTGTTaGTGGACATTCGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LEQSSDSQGIHPRARASRPSDSC*WTFAVL
Trigger: CAAAACAGCGAATGTCCATCAACAGGAATCGGATGG...TCGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp ATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGTCGTCCTATCACCTaGGCGTGCTCACTACTTCTG +
Preference number: 4 (lower is better)
Translates to: IPALLEQSSDSQGIHPRASRPIT*ACSLLL
Trigger: CAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACT...GGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CGTAAGGACATCCTGCAGAGACATGGTCCCCCTCACAGCGACCACAACAGACTCGGCGGGCAGATCACTTaGGGTCAGGAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: RKDILQRHGPPHSDHNRLGGQIT*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCAAGTGATCTGCCCGCC...GAGTCTGTTGTGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATGTCCTTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp TCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACATGGTCCCCCTCAGAAATACCCTTGTGTaGCAGGCGGTCCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: SLSADRSVRTSCRDMVPLRNTLV*QAVLHL
Trigger: GAGGTGCAGGACCGCCTGGCACACAAGGGTATTTCT...GAGGGGGACCATGTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAGAGGCGCCCTCCTCCTaGAGGTGGATGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: ESSYHLSVLTTSATIMATEAPSS*RWMILP
Trigger: CGGCAGGATCATCCACCTGCAGGAGGAGGGCGCCTC...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTCCACAGCCCCCGGGGTaGGGAGAAGGCGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: IPVDGHSLFWRHGNSSDGPQPPG*GEGVAP
Trigger: AGGTGCTACGCCTTCTCCCCACCCCGGGGGCTGTGG...ACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp CGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTCCGTGGGCAAGTTGTTaGGGTTTCCTCCAAACAGTT +
Preference number: 4 (lower is better)
Translates to: RGCLHGRWVSGVVLSPERPWASC*GFLQTV
Trigger: AACTGTTTGGAGGAAACCCCAACAACTTGCCCACGG...ACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACACCAGTGGGGAGTCGCTaGAGAAGCTGTAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ESSYHLSVLTTSATIMATPVGSR*RSCRPG
Trigger: CCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGG...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGCCAAGTCATAGTCTGTaGTTCTGCTTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLPSHSL*FCFCSW
Trigger: CCAGCTGCAGAAGCAGAACCACAGACTATGACTTGG...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425398.6
CDS-3UTR TCA 90 bp ATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCACTCAGGAGCAATGCTaGAGGCTTGGCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: IPALLEQSSDSQGIHPRATQEQC*RLGSKS
Trigger: GGATTTTGAGCCAAGCCTTCAGCATTGCTCCTGAGT...GGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp CACTCCACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCACTCAGGAGCAATGCTaGAGGCTTGGCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: HSTSSTSLSADRSVRTSCTQEQC*RLGSKS
Trigger: GGATTTTGAGCCAAGCCTTCAGCATTGCTCCTGAGT...GCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp CCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGGGCTGTGGCCCACTATaGCCAGCCGGTACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PVDGHSLFWRHGNSSDGKGCGPL*PAGTQE
Trigger: CTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCC...CTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CAACTCGGGAGGCTGAGGCAGAAGAACCGCCTGAACCTGGGAGGTGGAGCTTGCGACACGATGAAGCTCTaGGAATATTCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QLGRLRQKNRLNLGGGACDTMKL*EYSCRA
Trigger: AGCTCTGCAGGAATATTCTCAGAGCTTCATCGTGTC...GCAAGCTCCACCTCCCAGGTTCAGGCGGTTCTTCTGCCTCAGCCTCCCGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp GATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCTATTGTTTCAACTCCTaGATCCACTGGCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: DSRTSGAVLRQPRDPSTGYCFNS*IHWPTP
Trigger: TGGGGTCGGCCAGTGGATTCAGGAGTTGAAACAATA...GCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR GCA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGTCCAGCTTTCCTCTGTaGATGAGATACAACGTCAGA +
Preference number: 4 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPSSFPL*MRYNVR
Trigger: TCTGACGTTGTATCTCATGCACAGAGGAAAGCTGGA...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp TCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTGTGCCAGGCGGTCCTaGACCTCACACTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SHPIPVDGHSLFWRHGNSCARRS*TSHSTS
Trigger: GGACGTGGAGTGTGAGGTGCAGGACCGCCTGGCACA...GGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp ATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTGAGGCGCCCTCCTCCTaGAGGTGGATGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: IPVDGHSLFWRHGNSSDGEAPSS*RWMILP
Trigger: CGGCAGGATCATCCACCTGCAGGAGGAGGGCGCCTC...ACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTAGACCAAGTCGTCGCTaGCGATGGCCCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SYHLSVLTTSATIMATMTRPSRR*RWPSAG
Trigger: GCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCT...AGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGCCGCCCCCGAGGCTGTaGCCCACTATGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLPPPRL*PTMTSR
Trigger: CCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGG...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGCCACAGCCCCCGGGGTaGGGAGAAGGCGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVPQPPG*GEGVAP
Trigger: AGGTGCTACGCCTTCTCCCCACCCCGGGGGCTGTGG...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGGCAAGATCTTGTACTTaGGTTTATTGCAGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPARSCT*VYCSAR
Trigger: TCGCGCACTGCAATAAACCCAAGTACAAGATCTTGC...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp GGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTCCCTCCTCCTGCAGGTaGATGATCCTGCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVMGTPRMVSQFKDKSVSPSSCR*MILPGG
Trigger: CCCTCCCGGCAGGATCATCCACCTGCAGGAGGAGGG...ACTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTAGGATGTCTGGCATGTaGTCGGTGAGCATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: STVAGSQESSYHLSVLTTRMSGM*SVSIFG
Trigger: TCCGAAGATGCTCACCGACCACATGCCAGACATCCT...AGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp TGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATAGGCCACGTCCACACTaGAGACCCCTTGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WVSGVVLSPERAHYFCYHRPRPH*RPLVLD
Trigger: GTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCT...ATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GATGAAAAGAGCTGCCTTGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTTGGGACAGTTTCCAGTaGCCCTGGTCAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: DEKSCLGGGRLRNCSRSSWDSFQ*PWSGHV
Trigger: GACGTGGCCTGACCAGGGCCACTGGAAACTGTCCCA...AGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCAAGGCAGCTCTTTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp GGGTGGGCCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCTGACACAGTACATATaGCAACTGCCAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: GWALDSRTSGAVLRQPRDLTQYI*QLPGES
Trigger: TGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAG...ATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGGACACACATGATGGCTaGCACAGTACATATGACAAC +
Preference number: 4 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLDTHDG*HSTYDN
Trigger: GTTGTCATATGTACTGTGTCAGCCATCATGTGTGTC...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp TGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTGGGTGGGCCCTGGATTCTCAATCAGCAACTCCTaGTGTGGACAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: WGWEAKELFTVFWVGPGFSISNS*CGQTTG
Trigger: CCCAGTTGTTTGTCCACATCAGGAGTTGCTGATTGA...GAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTGGAGGCGGCGGCCCCTaGGAGGAAGCGGCGAAGATG +
Preference number: 4 (lower is better)
Translates to: SVLTTSATIMATMTSHKLGGGGP*EEAAKM
Trigger: CATCTTCGCCGCTTCCTCTCAGGGGCCGCCGCCTCC...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436575.5
CDS-3UTR TCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTCTTCAGCAGCAGGATaGCGATGGCCGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVSSAAG*RWPPGG
Trigger: CCCACCTGGCGGCCATCGTCATCCTGCTGCTGAAGA...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436575.5
CDS-3UTR GCA 90 bp TCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGGCACTGAACACCATCTaGCACCCAGGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSYHLSVLTTSATIMATMALNTI*HPGSPQ
Trigger: CTGGGGGCTGCCTGGGTGGCAGATGGTGTTCAGTGC...CATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGATTCCTGCAGAGCTTTaGTCCACAGCCCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALIPAEL*STAPGV
Trigger: CACCCCGGGGGCTGTGGAGCAAAGCTCTGCAGGAAT...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGACTGGAGACCCCTTGTaGTGGACAGGAGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALTGDPL*WTGDAG
Trigger: GCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGT...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACACCTGGGCAGGCTCTTaGTTGTTCCTGATATTGTCC +
Preference number: 4 (lower is better)
Translates to: TSSTSLSADRSVRTSCRDTWAGS*LFLILS
Trigger: GGACAATATCAGGAACAACCAAGAGCCTGCCCAGGT...GTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp GAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTCCACAGCCCCCGGGGTaGGGAGAAGGCGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: ETMEFCSHPIPVDGHSLFPQPPG*GEGVAP
Trigger: AGGTGCTACGCCTTCTCCCCACCCCGGGGGCTGTGG...AAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACACCCCGTCCAGCTCCGTaGGCAAGTTGTTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: ESSYHLSVLTTSATIMATPRPAP*ASCWGF
Trigger: GAAACCCCAACAACTTGCCCACGGAGCTGGACGGGG...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTCCAGTGGGGAGTCGCTaGAGAAGCTGTAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: MDIRCFGVMGTPRMVSQFPVGSR*RSCRPG
Trigger: CCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGG...AAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTCCCTCCTCCTGCAGGTaGATGATCCTGCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SYHLSVLTTSATIMATMTPSSCR*MILPGG
Trigger: CCCTCCCGGCAGGATCATCCACCTGCAGGAGGAGGG...AGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp CGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAGGAGACCCCTTGTGCTaGACAGGAGACGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RCFGVMGTPRMVSQFKDKGDPLC*TGDAGR
Trigger: GCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCC...TTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGCTGTTCACGGTCTTCTaGGTGGGCCCTGGATTCCCG +
Preference number: 4 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALLFTVF*VGPGFP
Trigger: CGGGAATCCAGGGCCCACCCAGAAGACCGTGAACAG...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp GGGTGGGCCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATGCCTGTAAACTGAGTTaGATGAAAAGAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GWALDSRTSGAVLRQPRDACKLS*MKRAAL
Trigger: CAAGGCAGCTCTTTTCATCCAACTCAGTTTACAGGC...ATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGGTGGGAATAGGCAGTTaGGGGGCTGTGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVVGIGS*GAVARR
Trigger: CCGCCGAGCCACAGCCCCCCAACTGCCTATTCCCAC...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp CCCAGGAGAAAACCCCAGCCCGCACCCTCACCACAGTTCCATTTGTACATCCAGCTGCCAGGAGAATCATaGGGACGATCAAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: PRRKPQPAPSPQFHLYIQLPGES*GRSSNC
Trigger: GCAGTTACTTGATCGTCCTCATGATTCTCCTGGCAG...CTGGATGTACAAATGGAACTGTGGTGAGGGTGCGGGCTGGGGTTTTCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp CACTCCACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCCTGACACAGTACATATaGCAACTGCCAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: HSTSSTSLSADRSVRTSCLTQYI*QLPGES
Trigger: TGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAG...GCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGTGGAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp CCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGACTGTCCTGTCGCACTaGACACCATCTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PVDGHSLFWRHGNSSDGKTVLSH*TPSATQ
Trigger: CTGGGTGGCAGATGGTGTTCAGTGCGACAGGACAGT...CTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CACTCCACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCACAGACTCTTTCCTGTaGTCCAGAGCCACTAAAAAC +
Preference number: 4 (lower is better)
Translates to: HSTSSTSLSADRSVRTSCTDSFL*SRATKN
Trigger: GTTTTTAGTGGCTCTGGATCACAGGAAAGAGTCTGT...GCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGTGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp ATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTGGCTGTGGCCCACTATaGCCAGCCGGTACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: MDIRCFGVMGTPRMVSQFGCGPL*PAGTQE
Trigger: CTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCC...AAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGGCGGGTAGGCGGCTCTaGGCATGGTGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATIMATMTSHKLKSLRPWAGRRL*AWWPAG
Trigger: CCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGC...CCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTAGAAGGCGTAGCACCTaGCCTGCGGGTAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ETMEFCSHPIPVDGHSLFRRRST*PAGRRL
Trigger: GAGCCGCCTACCCGCAGGTCAGGTGCTACGCCTTCT...AAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp TCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACATGGTCCCCCTCGGACGAGTGACACGATaGAGCTCTGAGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: SLSADRSVRTSCRDMVPLGRVTR*SSENIP
Trigger: AGGAATATTCTCAGAGCTTCATCGTGTCACTCGTCC...GAGGGGGACCATGTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp ACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACGATACAACGTCAGAATaGCAATCCACCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: TSSTSLSADRSVRTSCRDDTTSE*QSTTAL
Trigger: GAGTGCTGTGGTGGATTGGCATTCTGACGTTGTATC...GTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR GCA 90 bp TATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCGCACTGAACACCATCTaGCACCCAGGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: YHLSVLTTSATIMATMTSALNTI*HPGSPQ
Trigger: CTGGGGGCTGCCTGGGTGGCAGATGGTGTTCAGTGC...GGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp AGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGTGTGCCAGGCGGTCCTaGACCTCACACTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SQFKDKSVSPSFLGQFPVCARRS*TSHSTS
Trigger: GGACGTGGAGTGTGAGGTGCAGGACCGCCTGGCACA...CACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp CCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCATTGGGTTTATTGCAGTaGGCGACCACTCGCAAGATT +
Preference number: 4 (lower is better)
Translates to: PWIPALLEQSSDSQGIHPLGLLQ*ATTRKI
Trigger: AATCTTGCGAGTGGTCGCGCACTGCAATAAACCCAA...TGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR GCA 90 bp CTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCGCGTCAGTAGGCTCTaGTCCCCCAGAAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLMDIRCFGVMGTPRMVSRVSRL*SPRRGC
Trigger: ACAGCCTCTTCTGGGGGAGCAGAGCCTACTGACGCG...ACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp CTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTACTGGAGACCCCTTGTaGTGGACAGGAGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLMDIRCFGVMGTPRMVSTGDPL*WTGDAG
Trigger: GCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGT...ACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp TGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTGGGTGGGCCCTGGATTCCGTGCTCACTACTTCTaGTACCATTATGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: WGWEAKELFTVFWVGPGFRAHYF*YHYGHN
Trigger: ATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACG...GAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR GCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTCTGTGGTTCTGCTTCTaGAGCTGGGAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVLWFCF*SWELPG
Trigger: CCCAGGGAGCTCCCAGCTGCAGAAGCAGAACCACAG...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425398.6
CDS-3UTR CCA 90 bp ATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTGTACCATCCCCGGCATaGCGAAGGTCCCGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: MDIRCFGVMGTPRMVSQFVPSPA*RRSRSS
Trigger: CGAGCTACGGGACCTTCGCCATGCCGGGGATGGTAC...AAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp ATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTTCCAGATCAGCTTCCTaGGAGCTCCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: IPVDGHSLFWRHGNSSDGSRSAS*ELPGAW
Trigger: CCATGCCCCAGGGAGCTCCCAGGAAGCTGATCTGGA...ACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CCA 90 bp CGTAAGGACATCCTGCAGAGACATGGTCCCCCTCACAGCGACCACAACAGACTCGCAATGCTGAAGGCTTaGCTCAAAATCCCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: RKDILQRHGPPHSDHNRLAMLKA*LKIPSL
Trigger: CAACGACGGGATTTTGAGCCAAGCCTTCAGCATTGC...GAGTCTGTTGTGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATGTCCTTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp CTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCCCCGTCCAGCTCCGTaGGCAAGTTGTTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLMDIRCFGVMGTPRMVSPRPAP*ASCWGF
Trigger: GAAACCCCAACAACTTGCCCACGGAGCTGGACGGGG...ACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp CGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAATGTGTCAGGACTTCCTaGTCGCCCCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RCFGVMGTPRMVSQFKDKCVRTS*SPPSSS
Trigger: GGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACA...TTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp AGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGTGTGTCAGGACTTCCTaGTCGCCCCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQFKDKSVSPSFLGQFPVCVRTS*SPPSSS
Trigger: GGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACA...CACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATCCCTCCTCCTGCAGGTaGATGATCCTGCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EFCSHPIPVDGHSLFWRHPSSCR*MILPGG
Trigger: CCCTCCCGGCAGGATCATCCACCTGCAGGAGGAGGG...ATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGGGAGACCCCTTGTGCTaGACAGGAGACGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLGDPLC*TGDAGR
Trigger: GCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCC...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGTGGGACAGTTTCCAGTaGCCCTGGTCAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SSYHLSVLTTSATIMATMWDSFQ*PWSGHV
Trigger: GACGTGGCCTGACCAGGGCCACTGGAAACTGTCCCA...CATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACACGATCAAGTAACTGCTaGGCAAGGCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: ESSYHLSVLTTSATIMATRSSNC*ARLHQH
Trigger: GTGCTGGTGGAGCCTTGCTCAGCAGTTACTTGATCG...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACGACACACATGATGGCTaGCACAGTACATATGACAAC +
Preference number: 4 (lower is better)
Translates to: TSSTSLSADRSVRTSCRDDTHDG*HSTYDN
Trigger: GTTGTCATATGTACTGTGTCAGCCATCATGTGTGTC...GTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACACCACGACGGTTGCGATaGTGCCGTTTACAACTGTCC +
Preference number: 4 (lower is better)
Translates to: ESSYHLSVLTTSATIMATPRRLR*CRLQLS
Trigger: GGACAGTTGTAAACGGCATCATCGCAACCGTCGTGG...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTCCTCCTGCAGGTGGATaGTCCTGCCGGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ETMEFCSHPIPVDGHSLFPPAGG*SCREGR
Trigger: TCTACCCTCCCGGCAGGATCATCCACCTGCAGGAGG...AAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp GACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGCGCGTCAGTAGGCTCTaGTCCCCCAGAAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DIRCFGVMGTPRMVSQFKRVSRL*SPRRGC
Trigger: ACAGCCTCTTCTGGGGGAGCAGAGCCTACTGACGCG...CTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTGAGGCGCCCTCCTCCTaGAGGTGGATGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SVLTTSATIMATMTSHKLEAPSS*RWMILP
Trigger: CGGCAGGATCATCCACCTGCAGGAGGAGGGCGCCTC...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAGTCGTCGCTGGCGATaGCCCAGCGCCGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: ATIMATMTSHKLKSLRPWSRRWR*PSAGRR
Trigger: TCTTCGGCCGGCGCTGGGCCATCGCCAGCGACGACT...CCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp CTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCGCCGCAATGTCGCTaGGCACCAGATCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSPERAHYFCYHYGHNDFPPQCR*APDLCL
Trigger: CAGACACAGATCTGGTGCCCAGCGACATTGCGGCGG...GAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CCA 90 bp ATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTGCATGGCAGACCACCTaGGCAGGCTCTTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: IPVDGHSLFWRHGNSSDGAWQTT*AGSWLF
Trigger: GAACAACCAAGAGCCTGCCCAGGTGGTCTGCCATGC...ACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCTGTGTCAGGACTTCCTaGTCGCCCCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSCVRTS*SPPSSS
Trigger: GGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACA...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GATGAAAAGAGCTGCCTTGGGGGTGGGAGGCTAAGGAACTGTTCACGGTCTTCTAGGATGTCTGGCATGTaGTCGGTGAGCATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: DEKSCLGGGRLRNCSRSSRMSGM*SVSIFG
Trigger: TCCGAAGATGCTCACCGACCACATGCCAGACATCCT...AGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCAAGGCAGCTCTTTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGCCGCATCAGGATGTCTaGCATGTGGTCGGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALPHQDV*HVVGEH
Trigger: ATGCTCACCGACCACATGCCAGACATCCTGATGCGG...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGGCCACGTCCACACTaGAGACCCCTTGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVRPRPH*RPLVLD
Trigger: GTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCT...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACGGATTCCCGCACTTCTaGAGCAGTCCTCAGACAGCC +
Preference number: 4 (lower is better)
Translates to: CSHPIPVDGHSLFWRHGNGFPHF*SSPQTA
Trigger: GGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCC...GTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR TCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTCCACGACGGTTGCGATaGTGCCGTTTACAACTGTCC +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVPRRLR*CRLQLS
Trigger: GGACAGTTGTAAACGGCATCATCGCAACCGTCGTGG...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATGCGGGTAGGCGGCTCTaGGCATGGTGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNAGRRL*AWWPAG
Trigger: CCCTGCTGGCCACCATGCTCAGAGCCGCCTACCCGC...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTCTTCCCCAGGACGAGTaGCACGATGAAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVLPQDE*HDEALR
Trigger: TCTCAGAGCTTCATCGTGTCACTCGTCCTGGGGAAG...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTCCTCCTGCAGGTGGATaGTCCTGCCGGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SVLTTSATIMATMTSHKLPPAGG*SCREGR
Trigger: TCTACCCTCCCGGCAGGATCATCCACCTGCAGGAGG...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTCAGCTCGAAGAACCCTaGGAAGACCAAGTCGTCGCT +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVQLEEP*EDQVVA
Trigger: AGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTG...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CCA 90 bp ATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTGACTATCCAGGTGGCTaGGGCCGGCAGAGGAATATG +
Preference number: 4 (lower is better)
Translates to: MDIRCFGVMGTPRMVSQFDYPGG*GRQRNM
Trigger: CATATTCCTCTGCCGGCCCCAGCCACCTGGATAGTC...AAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CCA 90 bp TATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCGACTATCCAGGTGGCTaGGGCCGGCAGAGGAATATG +
Preference number: 4 (lower is better)
Translates to: YHLSVLTTSATIMATMTSDYPGG*GRQRNM
Trigger: CATATTCCTCTGCCGGCCCCAGCCACCTGGATAGTC...GGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CCA 90 bp TATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATCCTGCAGAGACATaGTCCCCCTCACAGCGACCA +
Preference number: 4 (lower is better)
Translates to: YHLSVLTTSATIMATMTSHPAET*SPSQRP
Trigger: TGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATG...GGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ACGTCCAGCACCTCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACGTTGGTAAACGTATCTaGCAGCTTGAGAAATACCCT +
Preference number: 4 (lower is better)
Translates to: TSSTSLSADRSVRTSCRDVGKRI*QLEKYP
Trigger: AGGGTATTTCTCAAGCTGCCAGATACGTTTACCAAC...GTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTGCTGGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTCCGCATCAGGATGTCTaGCATGTGGTCGGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVPHQDV*HVVGEH
Trigger: ATGCTCACCGACCACATGCCAGACATCCTGATGCGG...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTTTCCAGTGGCCCTaGTCAGGCCACGTCCACACT +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVSFQWP*SGHVHT
Trigger: AGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACT...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTCCGCCGCAATGTCGCTaGGCACCAGATCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRPWNSVPIRFLLMDIRCPPQCR*APDLCP
Trigger: AGGACACAGATCTGGTGCCCAGCGACATTGCGGCGG...ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425398.6
CDS-3UTR TCA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGACTGTCCTGTCGCACTaGACACCATCTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLTVLSH*TPSATQ
Trigger: CTGGGTGGCAGATGGTGTTCAGTGCGACAGGACAGT...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGAACAGCACAAGAGCTTaGTTCTGGTTTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: PVDGHSLFWRHGNSSDGKNSTRA*FWFPTR
Trigger: GCGTGTGGGAAACCAGAATCAAGCTCTTGTGCTGTT...CTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR TCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAAACAGCACAAGAGCTTaGTTCTGGTTTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: ESSYHLSVLTTSATIMATNSTRA*FWFPTR
Trigger: GCGTGTGGGAAACCAGAATCAAGCTCTTGTGCTGTT...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR TCA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCCACCTCACTCTCCGCTaGCAGGTCCGTAAGGACATC +
Preference number: 4 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSHLTLR*QVRKDI
Trigger: GATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTG...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp AGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGAGAAATACCCTTGTGTaGCAGGCGGTCCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: SQFKDKSVSPSFLGQFPVRNTLV*QAVLHL
Trigger: GAGGTGCAGGACCGCCTGGCACACAAGGGTATTTCT...CACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGTGTACTTGGGTTTATTaGAGTGCGCGACCACTCGCA +
Preference number: 4 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALCTWVY*SARPLA
Trigger: TGCGAGTGGTCGCGCACTGCAATAAACCCAAGTACA...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTCCTGACCACGACGGTTaGGATGATGCCGTTTACAAC +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVPDHDG*DDAVYN
Trigger: GTTGTAAACGGCATCATCGCAACCGTCGTGGTCAGG...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425398.6
CDS-3UTR GCA 90 bp CACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATGATACAACGTCAGAATaGCAATCCACCGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: HLSVLTTSATIMATMTSHDTTSE*QSTGAG
Trigger: TCCTGCGCCGGTGGATTGGCATTCTGACGTTGTATC...ATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436575.5
CDS-3UTR CCA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGCATGGCAGACCACCTaGGCAGGCTCTTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSAWQTT*AGSWLF
Trigger: GAACAACCAAGAGCCTGCCCAGGTGGTCTGCCATGC...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTAGTTTCCAGTGGCCCTaGTCAGGCCACGTCCACACT +
Preference number: 4 (lower is better)
Translates to: LRPWNSVPIRFLLMDIRCSFQWP*SGHVHT
Trigger: AGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACT...ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACGGACATTCGCTGTTTTaGCGTCATGGGAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: CSHPIPVDGHSLFWRHGNGHSLF*RHGNSS
Trigger: CGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCC...GTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGGCTTTCCTCTGTGCATaGGATACAACGTCAGAATGC +
Preference number: 4 (lower is better)
Translates to: PVDGHSLFWRHGNSSDGKAFLCA*DTTSEC
Trigger: GCATTCTGACGTTGTATCTCATGCACAGAGGAAAGC...CTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTAGCCGAAGTGACAGTTaGGCTGATCGCCTCCGACCA +
Preference number: 4 (lower is better)
Translates to: SVLTTSATIMATMTSHKLSRSDS*ADRLRP
Trigger: TGGTCGGAGGCGATCAGCTCAACTGTCACTTCGGCT...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCACCTCACTCTCCGCTaGCAGGTCCGTAAGGACATC +
Preference number: 4 (lower is better)
Translates to: MVSQFKDKSVSPSFLGQFHLTLR*QVRKDI
Trigger: GATGTCCTTACGGACCTGTCAGCGGAGAGTGAGGTG...AAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACTTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTACGTATCTGGCAGCTTaGGAAATACCCTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVTYLAA*EIPLCA
Trigger: GGCACACAAGGGTATTTCTCAAGCTGCCAGATACGT...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp TCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTGAATTCCGCTTCGTGTaGCCACTTGGCGCTATAGTG +
Preference number: 4 (lower is better)
Translates to: SYHLSVLTTSATIMATMTEFRFV*PLGAIV
Trigger: CACTATAGCGCCAAGTGGTCACACGAAGCGGAATTC...AGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGGAATTCCGCTTCGTGTaGCCACTTGGCGCTATAGTG +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVEFRFV*PLGAIV
Trigger: CACTATAGCGCCAAGTGGTCACACGAAGCGGAATTC...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGAGTCGTCCTATCACCTaGGCGTGCTCACTACTTCTG +
Preference number: 4 (lower is better)
Translates to: DIRCFGVMGTPRMVSQFKSRPIT*ACSLLL
Trigger: CAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACT...CTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp GACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGCTGTGGTTCTGCTTCTaGAGCAGTCACCACCAATCC +
Preference number: 4 (lower is better)
Translates to: DIRCFGVMGTPRMVSQFKLWFCF*SSHHQS
Trigger: GGATTGGTGGTGACTGCTGCAGAAGCAGAACCACAG...CTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp GCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGATTCCTGCAGAGCTTTaGTCCACAGCCCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: ATIMATMTSHKLKSLRPWIPAEL*STAPGV
Trigger: CACCCCGGGGGCTGTGGAGCAAAGCTCTGCAGGAAT...CCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp CTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTTGTACTTGGGTTTATTaGAGTGCGCGACCACTCGCA +
Preference number: 4 (lower is better)
Translates to: LLMDIRCFGVMGTPRMVSCTWVY*SARPLA
Trigger: TGCGAGTGGTCGCGCACTGCAATAAACCCAAGTACA...ACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACCTGGGCAGGCTCTTaGTTGTTCCTGATATTGTCC +
Preference number: 4 (lower is better)
Translates to: SSYHLSVLTTSATIMATMTWAGS*LFLILS
Trigger: GGACAATATCAGGAACAACCAAGAGCCTGCCCAGGT...CATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGCCGTGGGCAAGTTGTTaGGGTTTCCTCCAAACAGTT +
Preference number: 4 (lower is better)
Translates to: SSYHLSVLTTSATIMATMPWASC*GFLQTV
Trigger: AACTGTTTGGAGGAAACCCCAACAACTTGCCCACGG...CATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTCTTCGTGTGACCACTTaGCGCTATAGTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MDIRCFGVMGTPRMVSQFLRVTT*RYSEQQ
Trigger: CTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAG...AAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCAGGATGTCTGGCATGTaGTCGGTGAGCATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: YHLSVLTTSATIMATMTSRMSGM*SVSIFG
Trigger: TCCGAAGATGCTCACCGACCACATGCCAGACATCCT...GGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTCCGCATCAGGATGTCTaGCATGTGGTCGGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LRPWNSVPIRFLLMDIRCPHQDV*HVVGEH
Trigger: ATGCTCACCGACCACATGCCAGACATCCTGATGCGG...ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCTGGGACAGTTTCCAGTaGCCCTGGTCAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: ATMTSHKLKSLRPWNSVPWDSFQ*PWSGHV
Trigger: GACGTGGCCTGACCAGGGCCACTGGAAACTGTCCCA...GGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCCTTCTGGGTGGGCCCTaGATTCCCGCACTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATMTSHKLKSLRPWNSVPLLGGP*IPALLE
Trigger: CTCCAGAAGTGCGGGAATCCAGGGCCCACCCAGAAG...GGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp ATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTGAGCTGCCTTGGGGGTaGGAGGCTAAGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: MVSQFKDKSVSPSFLGQFELPWG*EAKELF
Trigger: GAACAGTTCCTTAGCCTCCCACCCCCAAGGCAGCTC...AAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACTTACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR TCA 90 bp GGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTGCTTTCCTCTGTGCATaGGATACAACGTCAGAATGC +
Preference number: 4 (lower is better)
Translates to: GVMGTPRMVSQFKDKSVSAFLCA*DTTSEC
Trigger: GCATTCTGACGTTGTATCTCATGCACAGAGGAAAGC...ACTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTGCTTTCCTCTGTGCATaGGATACAACGTCAGAATGC +
Preference number: 4 (lower is better)
Translates to: IPVDGHSLFWRHGNSSDGAFLCA*DTTSEC
Trigger: GCATTCTGACGTTGTATCTCATGCACAGAGGAAAGC...ACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGCTGACACAGTACATATaGCAACTGCCAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: RFLLMDIRCFGVMGTPRMLTQYI*QLPGES
Trigger: TGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAG...CATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCAACTGGCTTGAATCATaGCTATCCAGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSNWLES*LSRWLG
Trigger: CCCCAGCCACCTGGATAGTCATGATTCAAGCCAGTT...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR TCA 90 bp GATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTGGACGAGTGACACGATaGAGCTCTGAGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: DGHSLFWRHGNSSDGKSVGRVTR*SSENIP
Trigger: AGGAATATTCTCAGAGCTTCATCGTGTCACTCGTCC...AACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp TCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGGGACGAGTGACACGATaGAGCTCTGAGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: SSYHLSVLTTSATIMATMGRVTR*SSENIP
Trigger: AGGAATATTCTCAGAGCTTCATCGTGTCACTCGTCC...CATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTGGACGAGTGACACGATaGAGCTCTGAGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: IPVDGHSLFWRHGNSSDGGRVTR*SSENIP
Trigger: AGGAATATTCTCAGAGCTTCATCGTGTCACTCGTCC...ACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATCCATCCGATTCCTGTTaGTGGACATTCGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: HLSVLTTSATIMATMTSHPSDSC*WTFAVL
Trigger: CAAAACAGCGAATGTCCATCAACAGGAATCGGATGG...ATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp CACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATGATACAACGTCAGAATaGCAATCCACCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: HLSVLTTSATIMATMTSHDTTSE*QSTTAL
Trigger: GAGTGCTGTGGTGGATTGGCATTCTGACGTTGTATC...ATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR GCA 90 bp GACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGCCACACGCTTGTAGCTaGTGTCTTGAGGCCATTAAG +
Preference number: 4 (lower is better)
Translates to: DIRCFGVMGTPRMVSQFKPHACS*CLEAIK
Trigger: CTTAATGGCCTCAAGACAGCAGCTACAAGCGTGTGG...CTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCCCACCCATAGGCCGCTaGTGCAAACTGCATGTAATG +
Preference number: 4 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSPPIGR*CKLHVM
Trigger: CATTACATGCAGTTTGCAGCAGCGGCCTATGGGTGG...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTAGAAATACCCTTGTGTaGCAGGCGGTCCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: SVLTTSATIMATMTSHKLRNTLV*QAVLHL
Trigger: GAGGTGCAGGACCGCCTGGCACACAAGGGTATTTCT...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGTCGTACCACAAACCGTaGAGCAAGATCTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALSYHKP*SKILYL
Trigger: CAAGTACAAGATCTTGCTGCACGGTTTGTGGTACGA...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCCATCCTGCAGAGACATaGTCCCCCTCACAGCGACCA +
Preference number: 4 (lower is better)
Translates to: ATMTSHKLKSLRPWNSVPHPAET*SPSQRP
Trigger: TGGTCGCTGTGAGGGGGACCATGTCTCTGCAGGATG...GGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGCAATGCTGAAGGCTTaGCTCAAAATCCCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: DIRCFGVMGTPRMVSQFKAMLKA*LKIPSL
Trigger: CAACGACGGGATTTTGAGCCAAGCCTTCAGCATTGC...CTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTCTGCCAGGAGAATCATaGGGACGATCAAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: ETMEFCSHPIPVDGHSLFLPGES*GRSSNC
Trigger: GCAGTTACTTGATCGTCCTCATGATTCTCCTGGCAG...AAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp AATGCTGAAGGCTTGGCTCAAAATCCCGTCGTTGATGAGTCGTTGGTAAACGTACTGCCAGGAGAATCATaGGGACGATCAAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: NAEGLAQNPVVDESLVNVLPGES*GRSSNC
Trigger: GCAGTTACTTGATCGTCCTCATGATTCTCCTGGCAG...TACGTTTACCAACGACTCATCAACGACGGGATTTTGAGCCAAGCCTTCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp GCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCCCACGACGGTTGCGATaGTGCCGTTTACAACTGTCC +
Preference number: 4 (lower is better)
Translates to: ATMTSHKLKSLRPWNSVPPRRLR*CRLQLS
Trigger: GGACAGTTGTAAACGGCATCATCGCAACCGTCGTGG...GGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGACGTATCTGGCAGCTTaGGAAATACCCTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLTYLAA*EIPLCA
Trigger: GGCACACAAGGGTATTTCTCAAGCTGCCAGATACGT...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp AGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTAGTCGTCCTATCACCTaGGCGTGCTCACTACTTCTG +
Preference number: 4 (lower is better)
Translates to: RPWNSVPIRFLLMDIRCFSRPIT*ACSLLL
Trigger: CAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACT...AAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp ATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTACTGACCACGACGGTTaGGATGATGCCGTTTACAAC +
Preference number: 4 (lower is better)
Translates to: MEFCSHPIPVDGHSLFWRTDHDG*DDAVYN
Trigger: GTTGTAAACGGCATCATCGCAACCGTCGTGGTCAGT...ACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCCCCATAGGCCGCTGCTaGAAACTGCATGTAATGATG +
Preference number: 4 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSPIGRC*KLHVMM
Trigger: CATCATTACATGCAGTTTGCAGCAGCGGCCTATGGG...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGCATAGTCTGTGGTTCTaGTTCTGCAGCAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLHSLWF*FCSSHH
Trigger: GTGGTGACTGCTGCAGAAGCAGAACCACAGACTATG...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTGTACTTGGGTTTATTaGAGTGCGCGACCACTCGCA +
Preference number: 4 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLCTWVY*SARPLA
Trigger: TGCGAGTGGTCGCGCACTGCAATAAACCCAAGTACA...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp ATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCATAGTCTGTGGTTCTaGTTCTGCAGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: MVSQFKDKSVSPSFLGQFHSLWF*FCSWEL
Trigger: GAGCTCCCAGCTGCAGAAGCAGAACCACAGACTATG...AAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACTTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425398.6
CDS-3UTR CCA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGGTTGGTAAACGTATCTaGCAGCTTGAGAAATACCCT +
Preference number: 4 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALVGKRI*QLEKYP
Trigger: AGGGTATTTCTCAAGCTGCCAGATACGTTTACCAAC...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTCCGTGGGCAAGTTGTTaGGGTTTCCTCCAAACAGTT +
Preference number: 4 (lower is better)
Translates to: LRPWNSVPIRFLLMDIRCPWASC*GFLQTV
Trigger: AACTGTTTGGAGGAAACCCCAACAACTTGCCCACGG...ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTCTTCGTGTGACCACTTaGCGCTATAGTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVLTTSATIMATMTSHKLLRVTT*RYSEQQ
Trigger: CTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAG...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAAAGTCATTGAGACCATaGAATTCTGTTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: ESSYHLSVLTTSATIMATKSLRP*NSVPIR
Trigger: TCGGATGGGAACAGAATTCCATGGTCTCAATGACTT...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp AATGCTGAAGGCTTGGCTCAAAATCCCGTCGTTGATGAGTCGTTGGTAAACGTACCAAGTCATAGTCTGTaGTTCTGCTTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NAEGLAQNPVVDESLVNVPSHSL*FCFCSW
Trigger: CCAGCTGCAGAAGCAGAACCACAGACTATGACTTGG...TACGTTTACCAACGACTCATCAACGACGGGATTTTGAGCCAAGCCTTCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp AATGCTGAAGGCTTGGCTCAAAATCCCGTCGTTGATGAGTCGTTGGTAAACGTAGCTTTCCTCTGTGCATaGGATACAACGTCAGAATGC +
Preference number: 4 (lower is better)
Translates to: NAEGLAQNPVVDESLVNVAFLCA*DTTSEC
Trigger: GCATTCTGACGTTGTATCTCATGCACAGAGGAAAGC...TACGTTTACCAACGACTCATCAACGACGGGATTTTGAGCCAAGCCTTCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGCTGACACAGTACATATaGCAACTGCCAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVLTQYI*QLPGES
Trigger: TGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAG...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp CTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCACAGACTCTTTCCTGTaGTCCAGAGCCACTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LSPERAHYFCYHYGHNDFTDSFL*SRATKN
Trigger: GTTTTTAGTGGCTCTGGATCACAGGAAAGAGTCTGT...GAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTGACACGATGAAGCTCTaGGAATATTCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: MEFCSHPIPVDGHSLFWRDTMKL*EYSCRA
Trigger: AGCTCTGCAGGAATATTCTCAGAGCTTCATCGTGTC...ACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp AAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGCTTCCCCAGGACGAGTaGCACGATGAAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KLKSLRPWNSVPIRFLLMLPQDE*HDEALR
Trigger: TCTCAGAGCTTCATCGTGTCACTCGTCCTGGGGAAG...CATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp AGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTTTAAGGACAAAAGCGTaGGTCCATCGTTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RPWNSVPIRFLLMDIRCFLRTKA*VHRSWD
Trigger: GTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAA...AAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGTCGTACCACAAACCGTaGAGCAAGATCTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVSYHKP*SKILYL
Trigger: CAAGTACAAGATCTTGCTGCACGGTTTGTGGTACGA...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGCGTGCTCACTACTTCTaGTACCATTATGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVRAHYF*YHYGHN
Trigger: ATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACG...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACGTTGGTAAACGTATCTaGCAGCTTGAGAAATACCCT +
Preference number: 4 (lower is better)
Translates to: CSHPIPVDGHSLFWRHGNVGKRI*QLEKYP
Trigger: AGGGTATTTCTCAAGCTGCCAGATACGTTTACCAAC...GTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATAGTTTCCAGTGGCCCTaGTCAGGCCACGTCCACACT +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNSFQWP*SGHVHT
Trigger: AGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACT...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATTGTCTCCACGGTCGCTaGGTCTCAGGAGTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNCLHGR*VSGVVL
Trigger: TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACA...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
3UTR CAA 72 bp TTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTaGATGGACATTCGCTGTTTTGGCGTCATGGGAACT +
Preference number: 4 (lower is better)
Translates to: LRPWNSVPIRFL*MDIRCFGVMGT
Trigger: AGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
3UTR CAA 72 bp GAAGGCTTGGCTCAAAATCCCGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGCTTGAGAAATACCCTT +
Preference number: 4 (lower is better)
Translates to: EGLAQNPVVDES*VNVSGSLRNTL
Trigger: AAGGGTATTTCTCAAGCTGCCAGATACGTTTACCAACGACTCATCAACGACGGGATTTTGAGCCAAGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR TCA 90 bp GCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGCTGCCAGGAGAATCATaGGGACGATCAAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: ATIMATMTSHKLKSLRPWLPGES*GRSSNC
Trigger: GCAGTTACTTGATCGTCCTCATGATTCTCCTGGCAG...CCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp ATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTGACACACATGATGGCTaGCACAGTACATATGACAAC +
Preference number: 4 (lower is better)
Translates to: MEFCSHPIPVDGHSLFWRDTHDG*HSTYDN
Trigger: GTTGTCATATGTACTGTGTCAGCCATCATGTGTGTC...ACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTGACACACATGATGGCTaGCACAGTACATATGACAAC +
Preference number: 4 (lower is better)
Translates to: ETMEFCSHPIPVDGHSLFDTHDG*HSTYDN
Trigger: GTTGTCATATGTACTGTGTCAGCCATCATGTGTGTC...AAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp TTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTACAGACTCTTTCCTGTaGTCCAGAGCCACTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LRPWNSVPIRFLLMDIRCTDSFL*SRATKN
Trigger: GTTTTTAGTGGCTCTGGATCACAGGAAAGAGTCTGT...ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp GCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCACTCAGGAGCAATGCTaGAGGCTTGGCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: ATMTSHKLKSLRPWNSVPTQEQC*RLGSKS
Trigger: GGATTTTGAGCCAAGCCTTCAGCATTGCTCCTGAGT...GGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTTTGGGTTTATTGCAGTaGGCGACCACTCGCAAGATT +
Preference number: 4 (lower is better)
Translates to: SVLTTSATIMATMTSHKLLGLLQ*ATTRKI
Trigger: AATCTTGCGAGTGGTCGCGCACTGCAATAAACCCAA...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGCGTGCTCACTACTTCTaGTACCATTATGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLRAHYF*YHYGHN
Trigger: ATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACG...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCAAAGCAACCCGAGTATaGTCGTCTTTCCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSKATRV*SSFPMQ
Trigger: TTGCATTGGGAAAGACGACCATACTCGGGTTGCTTT...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CCA 90 bp GCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGACCTGGGCAGGCTCTTaGTTGTTCCTGATATTGTCC +
Preference number: 4 (lower is better)
Translates to: ATIMATMTSHKLKSLRPWTWAGS*LFLILS
Trigger: GGACAATATCAGGAACAACCAAGAGCCTGCCCAGGT...CCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp TTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTGCAAGATCTTGTACTTaGGTTTATTGCAGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: LRPWNSVPIRFLLMDIRCARSCT*VYCSAR
Trigger: TCGCGCACTGCAATAAACCCAAGTACAAGATCTTGC...ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR TCA 90 bp AAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGACTCAGGAGCAATGCTaGAGGCTTGGCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: KLKSLRPWNSVPIRFLLMTQEQC*RLGSKS
Trigger: GGATTTTGAGCCAAGCCTTCAGCATTGCTCCTGAGT...CATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR GCA 90 bp CTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCACCCATAGGCCGCTGCTaGAAACTGCATGTAATGATG +
Preference number: 4 (lower is better)
Translates to: LTTSATIMATMTSHKLKSPIGRC*KLHVMM
Trigger: CATCATTACATGCAGTTTGCAGCAGCGGCCTATGGG...TGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATCCACCCATAGGCCGCTaGTGCAAACTGCATGTAATG +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNPPIGR*CKLHVM
Trigger: CATTACATGCAGTTTGCAGCAGCGGCCTATGGGTGG...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR GCA 90 bp AGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTTCGTACCACAAACCGTaGAGCAAGATCTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: RPWNSVPIRFLLMDIRCFSYHKP*SKILYL
Trigger: CAAGTACAAGATCTTGCTGCACGGTTTGTGGTACGA...AAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTAAGTCATTGAGACCATaGAATTCTGTTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: MEFCSHPIPVDGHSLFWRKSLRP*NSVPIR
Trigger: TCGGATGGGAACAGAATTCCATGGTCTCAATGACTT...ACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATACCTGGGCAGGCTCTTaGTTGTTCCTGATATTGTCC +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNTWAGS*LFLILS
Trigger: GGACAATATCAGGAACAACCAAGAGCCTGCCCAGGT...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp CTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCACCAAGTCATAGTCTGTaGTTCTGCTTCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LTTSATIMATMTSHKLKSPSHSL*FCFCSS
Trigger: ACTGCTGCAGAAGCAGAACCACAGACTATGACTTGG...TGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CCA 90 bp CATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGCCAAGTCATAGTCTGTaGTTCTGCTTCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HKLKSLRPWNSVPIRFLLPSHSL*FCFCSS
Trigger: ACTGCTGCAGAAGCAGAACCACAGACTATGACTTGG...CAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATGCAATGCTGAAGGCTTaGCTCAAAATCCCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNAMLKA*LKIPSL
Trigger: CAACGACGGGATTTTGAGCCAAGCCTTCAGCATTGC...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATCAGCAACTCCTGATGTaGACAAACAACTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNQQLLM*TNNWAV
Trigger: CACTGCCCAGTTGTTTGTCCACATCAGGAGTTGCTG...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CCA 90 bp ACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATGCAAGATCTTGTACTTaGGTTTATTGCAGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: TIMATMTSHKLKSLRPWNARSCT*VYCSAR
Trigger: TCGCGCACTGCAATAAACCCAAGTACAAGATCTTGC...ATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS CCA 90 bp CGCTGGCGATGGCCCAGCGCCGGCCGAAGAGTACCATCCCCGGCATaGCGAAGGTCCCGTAGCTCGCACTCAGGAGAGACCCCGCGCGCC +
Preference number: 5 (lower is better)
Translates to: RWRWPSAGRRVPSPA*RRSRSSHSGETPRA
Trigger: GGCGCGCGGGGTCTCTCCTGAGTGCGAGCTACGGGACCTTCGCCATGCCGGGGATGGTACTCTTCGGCCGGCGCTGGGCCATCGCCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS CCA 90 bp TGCTGCTGGGCTGGAGGCCCCGGCAGCAGCGTCCAGGCTGCGGAGTaGGCATGGGGGAGGCTGCTGGGTAAAGCACCCAGAGCTGTGATA +
Preference number: 5 (lower is better)
Translates to: CCWAGGPGSSVQAAE*AWGRLLGKAPRAVI
Trigger: TATCACAGCTCTGGGTGCTTTACCCAGCAGCCTCCCCCATGCCCACTCCGCAGCCTGGACGCTGCTGCCGGGGCCTCCAGCCCAGCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS TCA 90 bp ACCCGCTGGCTGGGGCCCTGGGCACGGCTCCACACCAGCCATATTTaGAAAGGTCCACAGGCGAGTGCTGTGCTGCTGGGCTGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TRWLGPWARLHTSHI*KGPQASAVLLGWRP
Trigger: GGGCCTCCAGCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGGAGCCGTGCCCAGGGCCCCAGCCAGCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS CCA 90 bp CGACCAGCTCGAAGAACCCTGGGAAGACCAAGTCGTCGCTGGCGATaGCCCAGCGCCGGCCGAAGAGTACCATCCCCGGCATGGCGAAGG +
Preference number: 5 (lower is better)
Translates to: RPARRTLGRPSRRWR*PSAGRRVPSPAWRR
Trigger: CCTTCGCCATGCCGGGGATGGTACTCTTCGGCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS CCA 90 bp CTCGCACGACCAGCTCGAAGAACCCTGGGAAGACCAAGTCGTCGCTaGCGATGGCCCAGCGCCGGCCGAAGAGTACCATCCCCGGCATGG +
Preference number: 5 (lower is better)
Translates to: LARPARRTLGRPSRR*RWPSAGRRVPSPAW
Trigger: CCATGCCGGGGATGGTACTCTTCGGCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTGGTCGTGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS GCA 90 bp TTCCAGTGGCCCTGGTCAGGCCACGTCCACACTGGAGACCCCTTGTaGTGGACAGGAGACGCAGGCCGCTCTGTCGGAGACCACGCTGTC +
Preference number: 5 (lower is better)
Translates to: FQWPWSGHVHTGDPL*WTGDAGRSVGDHAV
Trigger: GACAGCGTGGTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS GCA 90 bp GGCTCCACACCAGCCATATTTGAAAAGGTCCACAGGCGAGTGCTGTaGTGCTGGGCTGGAGGCCCCGGCAGCAGCGTCCAGGCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: GSTPAIFEKVHRRVL*CWAGGPGSSVQAAE
Trigger: CTCCGCAGCCTGGACGCTGCTGCCGGGGCCTCCAGCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS GCA 90 bp GGCACGGCTCCACACCAGCCATATTTGAAAAGGTCCACAGGCGAGTaGTGTGCTGCTGGGCTGGAGGCCCCGGCAGCAGCGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GTAPHQPYLKRSTGE*CAAGLEAPAAASRL
Trigger: CAGCCTGGACGCTGCTGCCGGGGCCTCCAGCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGGAGCCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS CCA 90 bp CAGTGGCCCTGGTCAGGCCACGTCCACACTGGAGACCCCTTGTGCTaGACAGGAGACGCAGGCCGCTCTGTCGGAGACCACGCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: QWPWSGHVHTGDPLC*TGDAGRSVGDHAVQ
Trigger: TTGGACAGCGTGGTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 90 bp TGGGCTGGAGGCCCCGGCAGCAGCGTCCAGGCTGCGGAGTGGGCATaGGGGAGGCTGCTGGGTAAAGCACCCAGAGCTGTGATAAGAAAC +
Preference number: 5 (lower is better)
Translates to: WAGGPGSSVQAAEWA*GRLLGKAPRAVIRN
Trigger: GTTTCTTATCACAGCTCTGGGTGCTTTACCCAGCAGCCTCCCCCATGCCCACTCCGCAGCCTGGACGCTGCTGCCGGGGCCTCCAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS GCA 90 bp TCCACACCAGCCATATTTGAAAAGGTCCACAGGCGAGTGCTGTGCTaGTGGGCTGGAGGCCCCGGCAGCAGCGTCCAGGCTGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: STPAIFEKVHRRVLC*WAGGPGSSVQAAEW
Trigger: CCACTCCGCAGCCTGGACGCTGCTGCCGGGGCCTCCAGCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS CCA 90 bp TTCCTGGGACAGTTTCCAGTGGCCCTGGTCAGGCCACGTCCACACTaGAGACCCCTTGTGCTGGACAGGAGACGCAGGCCGCTCTGTCGG +
Preference number: 5 (lower is better)
Translates to: FLGQFPVALVRPRPH*RPLVLDRRRRPLCR
Trigger: CCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACTGTCCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 90 bp ACACCAGCCATATTTGAAAAGGTCCACAGGCGAGTGCTGTGCTGCTaGGCTGGAGGCCCCGGCAGCAGCGTCCAGGCTGCGGAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: TPAIFEKVHRRVLCC*AGGPGSSVQAAEWA
Trigger: TGCCCACTCCGCAGCCTGGACGCTGCTGCCGGGGCCTCCAGCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS TCA 90 bp ATCCACCGGCGCAGGAGCGCGTCTTCCAGATCTTCAGCAGCAGGATaGCGATGGCCGCCAGGTGGGACAGGTCCCCAGTCAGCCGGAAAA +
Preference number: 5 (lower is better)
Translates to: IHRRRSASSRSSAAG*RWPPGGTGPQSAGK
Trigger: TTTTCCGGCTGACTGGGGACCTGTCCCACCTGGCGGCCATCGTCATCCTGCTGCTGAAGATCTGGAAGACGCGCTCCTGCGCCGGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436575.5
CDS TCA 90 bp CGTTGCAGAAGCGGCCGTCAGCCTGTGATGGGCAGGGTGGGAGAATaGCAGGTGGTCCCTGCTCCTGACACTTCTGTGGAGGATGGCGGG +
Preference number: 5 (lower is better)
Translates to: RCRSGRQPVMGRVGE*QVVPAPDTSVEDGG
Trigger: CCCGCCATCCTCCACAGAAGTGTCAGGAGCAGGGACCACCTGTCATTCTCCCACCCTGCCCATCACAGGCTGACGGCCGCTTCTGCAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS GCA 90 bp AATCAGCAGCCACGTCCATCGTGCATGGCTGTGCTCCTGGCACCTTaGACAGCGCCTGACGTGAAGCAGGTGCCAGGTGTGGTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: NQQPRPSCMAVLLAP*TAPDVKQVPGVVAH
Trigger: GTGCGCCACCACACCTGGCACCTGCTTCACGTCAGGCGCTGTGCAAGGTGCCAGGAGCACAGCCATGCACGATGGACGTGGCTGCTGATT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS CCA 90 bp AATGCCAATCCACCACAGCACTCGCACGACCAGCTCGAAGAACCCTaGGAAGACCAAGTCGTCGCTGGCGATGGCCCAGCGCCGGCCGAA +
Preference number: 5 (lower is better)
Translates to: NANPPQHSHDQLEEP*EDQVVAGDGPAPAE
Trigger: TTCGGCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTGGTCGTGCGAGTGCTGTGGTGGATTGGCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS GCA 90 bp ACCAGCTCTGGGCCAGGCGTGAAGGGTGGAGGGGACCATGGAGTGTaGCTAAGACACGCCCTGCGCCTTCCCCATCACACACACGTATTC +
Preference number: 5 (lower is better)
Translates to: TSSGPGVKGGGDHGV*LRHALRLPHHTHVF
Trigger: GAATACGTGTGTGTGATGGGGAAGGCGCAGGGCGTGTCTTAGGCACACTCCATGGTCCCCTCCACCCTTCACGCCTGGCCCAGAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS-3UTR CAA 90 bp GCCGCCCCGCCCCCGAGGCTGTGGCCCACTATGACCAGCCGGTACTCAGGAGCAAACGTATCTGGCAGCTaGAGAAATACCCTTGTGTGC +
Preference number: 5 (lower is better)
Translates to: AAPPPRLWPTMTSRYSGANVSGS*RNTLVC
Trigger: GCACACAAGGGTATTTCTCAAGCTGCCAGATACGTT...TGCTCCTGAGTACCGGCTGGTCATAGTGGGCCACAGCCTCGGGGGCGGGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS CCA 90 bp GCAGGGTGGGAGAATGACAGGTGGTCCCTGCTCCTGACACTTCTGTaGAGGATGGCGGGGATGGCACCATCTCCTAGTTCGGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: AGWENDRWSLLLTLL*RMAGMAPSPSSVLG
Trigger: TCCCAGGACCGAACTAGGAGATGGTGCCATCCCCGCCATCCTCCACAGAAGTGTCAGGAGCAGGGACCACCTGTCATTCTCCCACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS-3UTR CAA 90 bp TGGGCCCTGGATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATATTCCTGCAGAGCTTaGCTCCACAGCCCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: WALDSRTSGAVLRQPRDPYSCRA*LHSPRG
Trigger: ACCCCGGGGGCTGTGGAGCAAAGCTCTGCAGGAATA...TGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CAA 90 bp CAACTCGGGAGGCTGAGGCAGAAGAACCGCCTGAACCTGGGAGGTGGAGCTTGCTATTCCTGCAGAGCTTaGCTCAGCTGGGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: QLGRLRQKNRLNLGGGACYSCRA*LSWVRW
Trigger: CCACCGCACCCAGCTGAGCAAAGCTCTGCAGGAATA...GCAAGCTCCACCTCCCAGGTTCAGGCGGTTCTTCTGCCTCAGCCTCCCGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS TCA 90 bp GCCTGTGATGGGCAGGGTGGGAGAATGACAGGTGGTCCCTGCTCCTaGCACTTCTGTGGAGGATGGCGGGGATGGCACCATCTCCTAGTT +
Preference number: 5 (lower is better)
Translates to: ACDGQGGRMTGGPCS*HFCGGWRGWHHLLV
Trigger: AACTAGGAGATGGTGCCATCCCCGCCATCCTCCACAGAAGTGTCAGGAGCAGGGACCACCTGTCATTCTCCCACCCTGCCCATCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS TCA 90 bp CTCCCGGCTCTCCACAGGATCTCAGGGACAGGCCCCGTGTCCTGCTaGCCCTCTCAACAAGGCACCCGCTTACCTTGGGTTTATTGCAGT +
Preference number: 5 (lower is better)
Translates to: LPALHRISGTGPVSC*PSQQGTRLPWVYCS
Trigger: ACTGCAATAAACCCAAGGTAAGCGGGTGCCTTGTTGAGAGGGTCAGCAGGACACGGGGCCTGTCCCTGAGATCCTGTGGAGAGCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS GCA 90 bp CTCTCCTGGGATCTGAGACTGCAGAATCAGCAGCCACGTCCATCGTaGATGGCTGTGCTCCTGGCACCTTGCACAGCGCCTGACGTGAAG +
Preference number: 5 (lower is better)
Translates to: LSWDLRLQNQQPRPS*MAVLLAPCTAPDVK
Trigger: CTTCACGTCAGGCGCTGTGCAAGGTGCCAGGAGCACAGCCATGCACGATGGACGTGGCTGCTGATTCTGCAGTCTCAGATCCCAGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS CCA 90 bp CGCCCTGCGCCTTCCCCATCACACACACGTATTCTAAGGACCCCGTaGCACAGAACCTGTGCCAGGGTTCTGAACAAAGCCTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: RPAPSPSHTRILRTP*HRTCARVLNKAWFP
Trigger: CGGGAACCAGGCTTTGTTCAGAACCCTGGCACAGGTTCTGTGCCACGGGGTCCTTAGAATACGTGTGTGTGATGGGGAAGGCGCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS-3UTR CAA 90 bp ACGGGCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTAGCAAGATCTTGTACTaGGGTTTATTGCAGTGCGCG +
Preference number: 5 (lower is better)
Translates to: TGQGFPRLSPRSLGLRSRSKILY*GLLQCA
Trigger: CGCGCACTGCAATAAACCCAAGTACAAGATCTTGCT...ACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp CTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGATCCGTGGGCAAGTTGTaGGGGTTTCCTCCAAACAGT +
Preference number: 5 (lower is better)
Translates to: LEQSSDSQGIHPRARASRSVGKL*GFPPNS
Trigger: ACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGA...TCGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS TCA 90 bp AGGACATCCTGTAAAAAGGGCGTTGCAGAAGCGGCCGTCAGCCTGTaGTGGGCAGGGTGGGAGAATGACAGGTGGTCCCTGCTCCTGACA +
Preference number: 5 (lower is better)
Translates to: RTSCKKGVAEAAVSL*WAGWENDRWSLLLT
Trigger: TGTCAGGAGCAGGGACCACCTGTCATTCTCCCACCCTGCCCATCACAGGCTGACGGCCGCTTCTGCAACGCCCTTTTTACAGGATGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS-3UTR CAA 90 bp GCCAGGGCTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTAAACGTATCTGGCAGCTaGAGAAATACCCTTGTGTGC +
Preference number: 5 (lower is better)
Translates to: ARASRGCLHGRWVSGVVLNVSGS*RNTLVC
Trigger: GCACACAAGGGTATTTCTCAAGCTGCCAGATACGTT...TAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp CTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGAGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LEQSSDSQGIHPRARASRVVDES*VNVSGS
Trigger: GCTGCCAGATACGTTTACCAACGACTCATCAACGAC...TCGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp CCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PHFWSSPQTAKGSIHGPGVVDES*VNVSGS
Trigger: GCTGCCAGATACGTTTACCAACGACTCATCAACGAC...CCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp TCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAGGGCTTCCCGAGCAATGCTGAAGGCTaGGCTCAAAATCCCGTCGTT +
Preference number: 5 (lower is better)
Translates to: SGAVLRQPRDPSTGQGFPSNAEG*AQNPVV
Trigger: AACGACGGGATTTTGAGCCAAGCCTTCAGCATTGCT...CGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS GCA 90 bp TGCGATGATGCCGTTTACAACTGTCCTGTCGCACTGAACACCATCTaGCACCCAGGCAGCCCCCAGAGAGGCCCAGACCATCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: CDDAVYNCPVALNTI*HPGSPQRGPDHLWK
Trigger: TTTCCAGAGATGGTCTGGGCCTCTCTGGGGGCTGCCTGGGTGGCAGATGGTGTTCAGTGCGACAGGACAGTTGTAAACGGCATCATCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000436575.5
ENST00000479922.6
CDS CCA 90 bp TCAGGACTTCCTGGTCGCCCCCGTCCAGCTCCGTGGGCAAGTTGTTaGGGTTTCCTCCAAACAGTTCGTACCACAAACCGTGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SGLPGRPRPAPWASC*GFLQTVRTTNRAAR
Trigger: TCTTGCTGCACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 90 bp GAAGAGGCTGTGTCAGGACTTCCTGGTCGCCCCCGTCCAGCTCCGTaGGCAAGTTGTTGGGGTTTCCTCCAAACAGTTCGTACCACAAAC +
Preference number: 5 (lower is better)
Translates to: EEAVSGLPGRPRPAP*ASCWGFLQTVRTTN
Trigger: GTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACAGCCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS-3UTR CAA 90 bp CAACTCGGGAGGCTGAGGCAGAAGAACCGCCTGAACCTGGGAGGTGGAGCTTGCTGGGCAGGCTCTTGGTaGTTCCTGATATTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: QLGRLRQKNRLNLGGGACWAGSW*FLILSC
Trigger: ACAGGACAATATCAGGAACAACCAAGAGCCTGCCCA...GCAAGCTCCACCTCCCAGGTTCAGGCGGTTCTTCTGCCTCAGCCTCCCGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CAA 90 bp CGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGAGCGTAGCAATGCTGAAGGCTaGGCTCAAAATCCCGTCGTT +
Preference number: 5 (lower is better)
Translates to: RGCLHGRWVSGVVLSPERSNAEG*AQNPVV
Trigger: AACGACGGGATTTTGAGCCAAGCCTTCAGCATTGCT...ACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp CAACTCGGGAGGCTGAGGCAGAAGAACCGCCTGAACCTGGGAGGTGGAGCTTGCAGCAATGCTGAAGGCTaGGCTCAAAATCCCGTCGTT +
Preference number: 5 (lower is better)
Translates to: QLGRLRQKNRLNLGGGACSNAEG*AQNPVV
Trigger: AACGACGGGATTTTGAGCCAAGCCTTCAGCATTGCT...GCAAGCTCCACCTCCCAGGTTCAGGCGGTTCTTCTGCCTCAGCCTCCCGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS CCA 90 bp CGCTCTGTCGGAGACCACGCTGTCCAAGGCCCGCATCAGGATGTCTaGCATGTGGTCGGTGAGCATCTTCGGACCTATGAGTATTTTGCT +
Preference number: 5 (lower is better)
Translates to: RSVGDHAVQGPHQDV*HVVGEHLRTYEYFA
Trigger: AGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCCTGATGCGGGCCTTGGACAGCGTGGTCTCCGACAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS-3UTR CAA 90 bp GATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCTGGGCAGGCTCTTGGTaGTTCCTGATATTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: DSRTSGAVLRQPRDPSTGWAGSW*FLILSC
Trigger: ACAGGACAATATCAGGAACAACCAAGAGCCTGCCCA...GCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp ATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCTTCAGATCTTCCAAGTaGGTCACACTGAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: IPALLEQSSDSQGIHPRAFRSSK*VTLSLG
Trigger: TCCCAGGCTCAGTGTGACCAACTTGGAAGATCTGAA...GGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp CTTCCCGAGGCTGTCTCCACGGTCGCTGGGTCTCAGGAGTCGTCCTATCACCTGCCCATCCGATTCCTGTaGATGGACATTCGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LPEAVSTVAGSQESSYHLPIRFL*MDIRCF
Trigger: AAAACAGCGAATGTCCATCAACAGGAATCGGATGGG...CAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS TCA 90 bp TGTACTGCAGCCCTGTGGTGTGCAGGATGGAGCCGAAGTGACAGTTaGGCTGATCGCCTCCGACCAAGTCATAGTCTGTGGTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CTAALWCAGWSRSDS*ADRLRPSHSLWFCF
Trigger: GAAGCAGAACCACAGACTATGACTTGGTCGGAGGCGATCAGCTCAACTGTCACTTCGGCTCCATCCTGCACACCACAGGGCTGCAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000454738.5
CDS GCA 90 bp ATCAGATGGTGGAAGGAGAACTTCCAGCAACAGCATAGAGTGCCCTaGACTGAGGGTGCAATTCCTCCCGGCTCTCCACAGGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: IRWWKENFQQQHRVP*TEGAIPPGSPQDLR
Trigger: CCTGAGATCCTGTGGAGAGCCGGGAGGAATTGCACCCTCAGTGCAGGGCACTCTATGCTGTTGCTGGAAGTTCTCCTTCCACCATCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS-3UTR CAA 90 bp ATTCCCGCACTTCTGGAGCAGTCCTCAGACAGCCAAGGGATCCATCCACGGGCCAACGTATCTGGCAGCTaGAGAAATACCCTTGTGTGC +
Preference number: 5 (lower is better)
Translates to: IPALLEQSSDSQGIHPRANVSGS*RNTLVC
Trigger: GCACACAAGGGTATTTCTCAAGCTGCCAGATACGTT...GGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000425398.6
CDS-3UTR CAA 90 bp TCACTCTCCGCTGACAGGTCCGTAAGGACATCCTGCAGAGACATGGTCCCCCTCGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SLSADRSVRTSCRDMVPLVVDES*VNVSGS
Trigger: GCTGCCAGATACGTTTACCAACGACTCATCAACGAC...GAGGGGGACCATGTCTCTGCAGGATGTCCTTACGGACCTGTCAGCGGAGAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CAA 90 bp TCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTATTCCTGCAGAGCTTaGCTCCACAGCCCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: SHPIPVDGHSLFWRHGNSYSCRA*LHSPRG
Trigger: ACCCCGGGGGCTGTGGAGCAAAGCTCTGCAGGAATA...GGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS TCA 90 bp AAGGCAGGCCCAGCAGAGACTCAAAGATGGGATGACGCTGTGCACTaGTGTGTGAGTCTCTCCTGGGATCTGAGACTGCAGAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: KAGPAETQRWDDAVH*CVSLSWDLRLQNQQ
Trigger: CTGCTGATTCTGCAGTCTCAGATCCCAGGAGAGACTCACACATCAGTGCACAGCGTCATCCCATCTTTGAGTCTCTGCTGGGCCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS CCA 90 bp TCGGAGACCACGCTGTCCAAGGCCCGCATCAGGATGTCTGGCATGTaGTCGGTGAGCATCTTCGGACCTATGAGTATTTTGCTGAATTCC +
Preference number: 5 (lower is better)
Translates to: SETTLSKARIRMSGM*SVSIFGPMSILLNS
Trigger: GGAATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCCTGATGCGGGCCTTGGACAGCGTGGTCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS-3UTR CAA 90 bp TCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCAGCTCCGTGGGCAAGTaGTTGGGGTTTCCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: SHPIPVDGHSLFWRHGNSSSVGK*LGFPPN
Trigger: GTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCT...GGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp CTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCACACTGGAGACCCCTaGTGCTGGACAGGAGACGCA +
Preference number: 5 (lower is better)
Translates to: LSPERAHYFCYHYGHNDFHTGDP*CWTGDA
Trigger: TGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTG...GAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS TCA 90 bp GAGCATCTTCGGACCTATGAGTATTTTGCTGAATTCCGCTTCGTGTaGCCACTTGGCGCTATAGTGAGCAGCAGAGCAGCAGCCAAACCG +
Preference number: 5 (lower is better)
Translates to: EHLRTYEYFAEFRFV*PLGAIVSSRAAAKP
Trigger: CGGTTTGGCTGCTGCTCTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAGCGGAATTCAGCAAAATACTCATAGGTCCGAAGATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS TCA 90 bp TTAATCCTCAGACAAGGCAGGCCCAGCAGAGACTCAAAGATGGGATaGCGCTGTGCACTGATGTGTGAGTCTCTCCTGGGATCTGAGACT +
Preference number: 5 (lower is better)
Translates to: LILRQGRPSRDSKMG*RCALMCESLLGSET
Trigger: AGTCTCAGATCCCAGGAGAGACTCACACATCAGTGCACAGCGTCATCCCATCTTTGAGTCTCTGCTGGGCCTGCCTTGTCTGAGGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS-3UTR CAA 90 bp CGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGTTGTACTTGGGTTTATaGCAGTGCGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: RFLLMDIRCFGVMGTPRMLYLGL*QCATTR
Trigger: GCGAGTGGTCGCGCACTGCAATAAACCCAAGTACAA...CATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp TTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGGCCCTGTCCGTGGGCAAGTTGTaGGGGTTTCCTCCAAACAGT +
Preference number: 5 (lower is better)
Translates to: FKDKSVSPSFLGQFPVALSVGKL*GFPPNS
Trigger: ACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGA...CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp CCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCCGTGGGCAAGTTGTaGGGGTTTCCTCCAAACAGT +
Preference number: 5 (lower is better)
Translates to: PVDGHSLFWRHGNSSDGKSVGKL*GFPPNS
Trigger: ACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGA...CTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp TGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCCACACTGGAGACCCCTaGTGCTGGACAGGAGACGCA +
Preference number: 5 (lower is better)
Translates to: CFGVMGTPRMVSQFKDKSHTGDP*CWTGDA
Trigger: TGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTG...GCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS TCA 90 bp CTTGTAGCTGCTGTCTTGAGGCCATTAAGTAACTGGCTTGAATCATaGCTATCCAGGTGGCTGGGGCCGGCAGAGGAATATGGAGCCATT +
Preference number: 5 (lower is better)
Translates to: LVAAVLRPLSNWLES*LSRWLGPAEEYGAI
Trigger: AATGGCTCCATATTCCTCTGCCGGCCCCAGCCACCTGGATAGTCATGATTCAAGCCAGTTACTTAATGGCCTCAAGACAGCAGCTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS GCA 90 bp CTGACCCTCTCAACAAGGCACCCGCTTACCTTGGGTTTATTGCAGTaGGCGACCACTCGCAAGATTCTTCTCTTCAGATCTTCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: LTLSTRHPLTLGLLQ*ATTRKILLFRSSKL
Trigger: CAACTTGGAAGATCTGAAGAGAAGAATCTTGCGAGTGGTCGCGCACTGCAATAAACCCAAGGTAAGCGGGTGCCTTGTTGAGAGGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS-3UTR CAA 90 bp GAGTCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACACAACAGCACAAGAGCTaGATTCTGGTTTCCCACACG +
Preference number: 5 (lower is better)
Translates to: ESSYHLSVLTTSATIMATQQHKS*ILVSHT
Trigger: CGTGTGGGAAACCAGAATCAAGCTCTTGTGCTGTTG...TGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CAA 90 bp TCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGTGGACATTCGCTGTTTaGGCGTCATGGGAACTCCTC +
Preference number: 5 (lower is better)
Translates to: SSYHLSVLTTSATIMATMWTFAV*ASWELL
Trigger: GAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCA...CATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS TCA 90 bp CTGGGCACCAGATCTGTGTCCTCTCATGCTGACACACATGATGGCTaGCACAGTACATATGACAACTGCCAGGAGAATCATGAGGACGAT +
Preference number: 5 (lower is better)
Translates to: LGTRSVSSHADTHDG*HSTYDNCQENHEDD
Trigger: ATCGTCCTCATGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAGCCATCATGTGTGTCAGCATGAGAGGACACAGATCTGGTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS-3UTR CAA 90 bp TCGTCCTATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGTTCAGATCTTCCAAGTaGGTCACACTGAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: SSYHLSVLTTSATIMATMFRSSK*VTLSLG
Trigger: TCCCAGGCTCAGTGTGACCAACTTGGAAGATCTGAA...CATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp TCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCCCGTGCAGCAAGATCTaGTACTTGGGTTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: SHPIPVDGHSLFWRHGNSPCSKI*YLGLLQ
Trigger: CTGCAATAAACCCAAGTACAAGATCTTGCTGCACGG...GGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGAGCTCCGTGGGCAAGTaGTTGGGGTTTCCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLSSVGK*LGFPPN
Trigger: GTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCT...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp CGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAATGGACATTCGCTGTTTaGGCGTCATGGGAACTCCTC +
Preference number: 5 (lower is better)
Translates to: RCFGVMGTPRMVSQFKDKWTFAV*ASWELL
Trigger: GAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCA...TTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS CCA 90 bp TTTCTTAGACATCACAGAGTCCTAGCCCAGAATCTGATCAGATGGTaGAAGGAGAACTTCCAGCAACAGCATAGAGTGCCCTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: FLRHHRVLAQNLIRW*KENFQQQHRVPCTE
Trigger: CTCAGTGCAGGGCACTCTATGCTGTTGCTGGAAGTTCTCCTTCCACCATCTGATCAGATTCTGGGCTAGGACTCTGTGATGTCTAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS-3UTR CAA 90 bp TGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACCTTGTAGCTGCTGTCTaGAGGCCATTAAGTAACTGG +
Preference number: 5 (lower is better)
Translates to: CSHPIPVDGHSLFWRHGNLVAAV*RPLSNW
Trigger: CCAGTTACTTAATGGCCTCAAGACAGCAGCTACAAG...GTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CAA 90 bp TCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGCGTCATGGGAACTCCTGTCTGAAAAGTAGGTaGAGAAAAGCTCTGCCGTAC +
Preference number: 5 (lower is better)
Translates to: SHPIPVDGHSLFWRHGNSCLKSR*RKALPY
Trigger: GTACGGCAGAGCTTTTCTCAACCTACTTTTCAGACA...GGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CAA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGTGGGCAGGCTCTTGGTaGTTCCTGATATTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVWAGSW*FLILSC
Trigger: ACAGGACAATATCAGGAACAACCAAGAGCCTGCCCA...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTGTACTTGGGTTTATaGCAGTGCGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLLYLGL*QCATTR
Trigger: GCGAGTGGTCGCGCACTGCAATAAACCCAAGTACAA...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTAGCTCCGTGGGCAAGTaGTTGGGGTTTCCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: SVLTTSATIMATMTSHKLSSVGK*LGFPPN
Trigger: GTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCT...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp ATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTGGACATTCGCTGTTTaGGCGTCATGGGAACTCCTC +
Preference number: 5 (lower is better)
Translates to: IETMEFCSHPIPVDGHSLWTFAV*ASWELL
Trigger: GAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCA...CAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp TATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCTCACCACAGTTCCATTaGTACATCCAGGAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: YHLSVLTTSATIMATMTSSPQFH*YIQEAQ
Trigger: CTGGGCTTCCTGGATGTACAAATGGAACTGTGGTGA...GGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS TCA 90 bp CTCAGCGAATTAACGCAGACAGAGAAAAGCAAACACCGCATGGTCTaGTGCGACGGTGGAAGCTCAACATTGGGTATTCATGGACACAAA +
Preference number: 5 (lower is better)
Translates to: LSELTQTEKSKHRMV*CDGGSSTLGIHGHK
Trigger: TTTGTGTCCATGAATACCCAATGTTGAGCTTCCACCGTCGCATCAGACCATGCGGTGTTTGCTTTTCTCTGTCTGCGTTAATTCGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS-3UTR CAA 90 bp TTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAGCGTGCTTGTAGCTGCTGTCTaGAGGCCATTAAGTAACTGG +
Preference number: 5 (lower is better)
Translates to: FGVMGTPRMVSQFKDKSVLVAAV*RPLSNW
Trigger: CCAGTTACTTAATGGCCTCAAGACAGCAGCTACAAG...CACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CAA 90 bp CGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAAACGTATCTGGCAGCTaGAGAAATACCCTTGTGTGC +
Preference number: 5 (lower is better)
Translates to: RCFGVMGTPRMVSQFKDKNVSGS*RNTLVC
Trigger: GCACACAAGGGTATTTCTCAAGCTGCCAGATACGTT...TTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp GAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTTCAGATCTTCCAAGTaGGTCACACTGAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: ETMEFCSHPIPVDGHSLFFRSSK*VTLSLG
Trigger: TCCCAGGCTCAGTGTGACCAACTTGGAAGATCTGAA...AAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTTTGTACTTGGGTTTATaGCAGTGCGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: SVLTTSATIMATMTSHKLLYLGL*QCATTR
Trigger: GCGAGTGGTCGCGCACTGCAATAAACCCAAGTACAA...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp TATCACCTGAGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCAGCAAGATCTTGTACTaGGGTTTATTGCAGTGCGCG +
Preference number: 5 (lower is better)
Translates to: YHLSVLTTSATIMATMTSSKILY*GLLQCA
Trigger: CGCGCACTGCAATAAACCCAAGTACAAGATCTTGCT...GGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp AGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCAGTGCCCATCCGATTCCTGTaGATGGACATTCGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SQFKDKSVSPSFLGQFPVPIRFL*MDIRCF
Trigger: AAAACAGCGAATGTCCATCAACAGGAATCGGATGGG...CACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS TCA 90 bp TCCAGGGTTACAAATCGTTCCTCTCATGCTGACACACATGATGGCTaGCACAGTACATATGACAACTGCCAGGAGAATCATGAGGACGAT +
Preference number: 5 (lower is better)
Translates to: SRVTNRSSHADTHDG*HSTYDNCQENHEDD
Trigger: ATCGTCCTCATGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAGCCATCATGTGTGTCAGCATGAGAGGAACGATTTGTAACCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000436575.5
ENST00000479922.6
CDS-3UTR CAA 90 bp CGCTGTTTTGGCGTCATGGGAACTCCTCGGATGGTAAGTCAGTTTAAGGACAAAGGACCTATGAGTATTTaGCTGAATTCCGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: RCFGVMGTPRMVSQFKDKGPMSI*LNSASC
Trigger: ACACGAAGCGGAATTCAGCAAAATACTCATAGGTCC...TTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp GCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGCAACAGCACAAGAGCTaGATTCTGGTTTCCCACACG +
Preference number: 5 (lower is better)
Translates to: ATIMATMTSHKLKSLRPWQQHKS*ILVSHT
Trigger: CGTGTGGGAAACCAGAATCAAGCTCTTGTGCTGTTG...CCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS-3UTR CAA 90 bp ATGGTAAGTCAGTTTAAGGACAAAAGCGTGAGTCCATCGTTCCTGGGACAGTTTCCGTGCAGCAAGATCTaGTACTTGGGTTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: MVSQFKDKSVSPSFLGQFPCSKI*YLGLLQ
Trigger: CTGCAATAAACCCAAGTACAAGATCTTGCTGCACGG...AAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACTTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp GAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTGGACCTATGAGTATTTaGCTGAATTCCGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: ETMEFCSHPIPVDGHSLFGPMSI*LNSASC
Trigger: ACACGAAGCGGAATTCAGCAAAATACTCATAGGTCC...AAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp AGCGTGCTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTCCCATCCGATTCCTGTaGATGGACATTCGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SVLTTSATIMATMTSHKLPIRFL*MDIRCF
Trigger: AAAACAGCGAATGTCCATCAACAGGAATCGGATGGG...AAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp AGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGTGACGCGCGCTTTATaGTTTCAACTCCTGAATCCA +
Preference number: 5 (lower is better)
Translates to: RPWNSVPIRFLLMDIRCFVTRAL*FQLLNP
Trigger: TGGATTCAGGAGTTGAAACAATAAAGCGCGCGTCAC...AAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297056.11
CDS-3UTR CAA 90 bp AAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: KLKSLRPWNSVPIRFLLMVVDES*VNVSGS
Trigger: GCTGCCAGATACGTTTACCAACGACTCATCAACGAC...CATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp CTCACTACTTCTGCTACCATTATGGCCACAATGACTTCCCATAAACTTAAGTCAAGCAATGCTGAAGGCTaGGCTCAAAATCCCGTCGTT +
Preference number: 5 (lower is better)
Translates to: LTTSATIMATMTSHKLKSSNAEG*AQNPVV
Trigger: AACGACGGGATTTTGAGCCAAGCCTTCAGCATTGCT...TGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp GCCACAATGACTTCCCATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCAGCAAGATCTTGTACTaGGGTTTATTGCAGTGCGCG +
Preference number: 5 (lower is better)
Translates to: ATMTSHKLKSLRPWNSVPSKILY*GLLQCA
Trigger: CGCGCACTGCAATAAACCCAAGTACAAGATCTTGCT...GGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp AGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGATGGACATTCGCTGTTTTGGACCTATGAGTATTTaGCTGAATTCCGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: RPWNSVPIRFLLMDIRCFGPMSI*LNSASC
Trigger: ACACGAAGCGGAATTCAGCAAAATACTCATAGGTCC...AAAACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS-3UTR CAA 90 bp CATAAACTTAAGTCATTGAGACCATGGAATTCTGTTCCCATCCGATTCCTGTTGCCGTGCAGCAAGATCTaGTACTTGGGTTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: HKLKSLRPWNSVPIRFLLPCSKI*YLGLLQ
Trigger: CTGCAATAAACCCAAGTACAAGATCTTGCTGCACGG...CAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
CDS TCA 90 bp CTCTGTGATTATATTAAAAACTCTCATGCTGACACACATGATGGCTaGCACAGTACATATGACAACTGCCAGGAGAATCATGAGGACGAT +
Preference number: 5 (lower is better)
Translates to: LCDYIKNSHADTHDG*HSTYDNCQENHEDD
Trigger: ATCGTCCTCATGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAGCCATCATGTGTGTCAGCATGAGAGTTTTTAATATAATCACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483716.1
CDS CCA 72 bp TGGCCCAGCGCCGGCCGAAGAGTACCATCCCCGGCATaGCGAAGGTCCCGTAGCTCGCACTCAGGAGAGACC +
Preference number: 6 (lower is better)
Translates to: WPSAGRRVPSPA*RRSRSSHSGET
Trigger: GGTCTCTCCTGAGTGCGAGCTACGGGACCTTCGCCATGCCGGGGATGGTACTCTTCGGCCGGCGCTGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS CAA 90 bp GACCCGCTGGCTGGGGCCCTGGGCACGGCTCCACACCAGCCATATTaGAAAAGGTCCACAGGCGAGTGCTGTGCTGCTGGGCTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: DPLAGALGTAPHQPY*KRSTGECCAAGLEA
Trigger: GGCCTCCAGCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGGAGCCGTGCCCAGGGCCCCAGCCAGCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS GCA 72 bp CCCTGGTCAGGCCACGTCCACACTGGAGACCCCTTGTaGTGGACAGGAGACGCAGGCCGCTCTGTCGGAGAC +
Preference number: 6 (lower is better)
Translates to: PWSGHVHTGDPL*WTGDAGRSVGD
Trigger: GTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp CGAAGAACCCTGGGAAGACCAAGTCGTCGCTGGCGATaGCCCAGCGCCGGCCGAAGAGTACCATCCCCGGCA +
Preference number: 6 (lower is better)
Translates to: RRTLGRPSRRWR*PSAGRRVPSPA
Trigger: TGCCGGGGATGGTACTCTTCGGCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCTTCCCAGGGTTCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS CAA 72 bp TGGCCCTGGTCAGGCCACGTCCACACTGGAGACCCCTaGTGCTGGACAGGAGACGCAGGCCGCTCTGTCGGA +
Preference number: 6 (lower is better)
Translates to: WPWSGHVHTGDP*CWTGDAGRSVG
Trigger: TCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp CCAGCTCGAAGAACCCTGGGAAGACCAAGTCGTCGCTaGCGATGGCCCAGCGCCGGCCGAAGAGTACCATCC +
Preference number: 6 (lower is better)
Translates to: PARRTLGRPSRR*RWPSAGRRVPS
Trigger: GGATGGTACTCTTCGGCCGGCGCTGGGCCATCGCCAGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS CCA 72 bp CCACCACAGCACTCGCACGACCAGCTCGAAGAACCCTaGGAAGACCAAGTCGTCGCTGGCGATGGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: PPQHSHDQLEEP*EDQVVAGDGPA
Trigger: CGCTGGGCCATCGCCAGCGACGACTTGGTCTTCCCAGGGTTCTTCGAGCTGGTCGTGCGAGTGCTGTGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS CCA 72 bp TGGTCAGGCCACGTCCACACTGGAGACCCCTTGTGCTaGACAGGAGACGCAGGCCGCTCTGTCGGAGACCAC +
Preference number: 6 (lower is better)
Translates to: WSGHVHTGDPLC*TGDAGRSVGDH
Trigger: GTGGTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp CAGTTTCCAGTGGCCCTGGTCAGGCCACGTCCACACTaGAGACCCCTTGTGCTGGACAGGAGACGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: QFPVALVRPRPH*RPLVLDRRRRP
Trigger: CGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp GCTGATGAAGCAGGGCGAGGCCCGCCGCAATGTCGCTaGGCACCAGATCTGTGTCCTGACCACGACGGTTGC +
Preference number: 6 (lower is better)
Translates to: ADEAGRGPPQCR*APDLCPDHDGC
Trigger: GCAACCGTCGTGGTCAGGACACAGATCTGGTGCCCAGCGACATTGCGGCGGGCCTCGCCCTGCTTCATCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425398.6
CDS CAA 90 bp AGTTTCCAGTGGCCCTGGTCAGGCCACGTCCACACTGGAGACCCCTaGTGCTGGACAGGAGACGCAGGCCGCTCTGTCGGAGACCACGCT +
Preference number: 6 (lower is better)
Translates to: SFQWPWSGHVHTGDP*CWTGDAGRSVGDHA
Trigger: AGCGTGGTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS TCA 72 bp CTGGGGCCCTGGGCACGGCTCCACACCAGCCATATTTaGAAAGGTCCACAGGCGAGTGCTGTGCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LGPWARLHTSHI*KGPQASAVLLG
Trigger: GCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGGAGCCGTGCCCAGGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS GCA 72 bp CCACACCAGCCATATTTGAAAAGGTCCACAGGCGAGTaGTGTGCTGCTGGGCTGGAGGCCCCGGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: PHQPYLKRSTGE*CAAGLEAPAAA
Trigger: CGCTGCTGCCGGGGCCTCCAGCCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS GCA 72 bp CCACGTCCATCGTGCATGGCTGTGCTCCTGGCACCTTaGACAGCGCCTGACGTGAAGCAGGTGCCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: PRPSCMAVLLAP*TAPDVKQVPGV
Trigger: CACACCTGGCACCTGCTTCACGTCAGGCGCTGTGCAAGGTGCCAGGAGCACAGCCATGCACGATGGACGTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS CAA 72 bp GCTGGGGCCCTGGGCACGGCTCCACACCAGCCATATTaGAAAAGGTCCACAGGCGAGTGCTGTGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: AGALGTAPHQPY*KRSTGECCAAG
Trigger: CCCAGCAGCACAGCACTCGCCTGTGGACCTTTTCAAATATGGCTGGTGTGGAGCCGTGCCCAGGGCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS CCA 72 bp GCTGATGAAGCAGGGCGAGGCCCGCCGCAATGTCGCTaGGCACCAGATCTGTGTCCTCTCATGCTGACACAC +
Preference number: 6 (lower is better)
Translates to: ADEAGRGPPQCR*APDLCPLMLTH
Trigger: GTGTGTCAGCATGAGAGGACACAGATCTGGTGCCCAGCGACATTGCGGCGGGCCTCGCCCTGCTTCATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS CAA 90 bp GCAGACCACCTGGGCAGGCTCTTGGTTGTTCCTGATATTGTCCTGTaGCTGATGAAGCAGGGCGAGGCCCGCCGCAATGTCGCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: ADHLGRLLVVPDIVL*LMKQGEARRNVAGH
Trigger: GTGCCCAGCGACATTGCGGCGGGCCTCGCCCTGCTTCATCAGCAACAGGACAATATCAGGAACAACCAAGAGCCTGCCCAGGTGGTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000454738.5
CDS TCA 72 bp CTCCACAGGATCTCAGGGACAGGCCCCGTGTCCTGCTaGCCCTCTCAACAAGGCACCCGCTTACCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: LHRISGTGPVSC*PSQQGTRLPWV
Trigger: AACCCAAGGTAAGCGGGTGCCTTGTTGAGAGGGTCAGCAGGACACGGGGCCTGTCCCTGAGATCCTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS TCA 72 bp CTCGGGAGGCTGAGGTGGGAGGGTCGCTGGAACACATaGAGTTCAGGCTGCAGTGAGTTATCGTCGCACCAC +
Preference number: 6 (lower is better)
Translates to: LGRLRWEGRWNT*SSGCSELSSHH
Trigger: GTGGTGCGACGATAACTCACTGCAGCCTGAACTTCATGTGTTCCAGCGACCCTCCCACCTCAGCCTCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS GCA 72 bp GGGCGACAGAGGGAGACTCCGTCTGACCACGACGGTTaGGATGATGCCGTTTACAACTGTCCTGTCGCACTG +
Preference number: 6 (lower is better)
Translates to: GRQRETPSDHDG*DDAVYNCPVAL
Trigger: CAGTGCGACAGGACAGTTGTAAACGGCATCATCGCAACCGTCGTGGTCAGACGGAGTCTCCCTCTGTCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479922.6
CDS CCA 72 bp CCTGGTCGCCCCCGTCCAGCTCCGTGGGCAAGTTGTTaGGGTTTCCTCCAAACAGTTCGTACCACAAACCGT +
Preference number: 6 (lower is better)
Translates to: PGRPRPAPWASC*GFLQTVRTTNR
Trigger: ACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp GTGTCAGGACTTCCTGGTCGCCCCCGTCCAGCTCCGTaGGCAAGTTGTTGGGGTTTCCTCCAAACAGTTCGT +
Preference number: 6 (lower is better)
Translates to: VSGLPGRPRPAP*ASCWGFLQTVR
Trigger: ACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp GGAGACCACGCTGTCCAAGGCCCGCATCAGGATGTCTaGCATGTGGTCGGTGAGCATCTTCGGACCTATGAG +
Preference number: 6 (lower is better)
Translates to: GDHAVQGPHQDV*HVVGEHLRTYE
Trigger: CTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCCTGATGCGGGCCTTGGACAGCGTGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp GGACTGAACCCTAAACTAAAGAGGGAAACCCAGCGGTaGCTCCTGAGGGCCCTGATGGCACGACCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: GLNPKLKRETQR*LLRALMARPAL
Trigger: CAGAGCTGGTCGTGCCATCAGGGCCCTCAGGAGCCACCGCTGGGTTTCCCTCTTTAGTTTAGGGTTCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS CAA 72 bp TCCTGGTCGCCCCCGTCCAGCTCCGTGGGCAAGTTGTaGGGGTTTCCTCCAAACAGTTCGTACCACAAACCG +
Preference number: 6 (lower is better)
Translates to: SWSPPSSSVGKL*GFPPNSSYHKP
Trigger: CGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CAA 90 bp GTCAGGACTTCCTGGTCGCCCCCGTCCAGCTCCGTGGGCAAGTTGTaGGGGTTTCCTCCAAACAGTTCGTACCACAAACCGTGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: VRTSWSPPSSSVGKL*GFPPNSSYHKPCSK
Trigger: CTTGCTGCACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CAA 90 bp TGTGTCAGGACTTCCTGGTCGCCCCCGTCCAGCTCCGTGGGCAAGTaGTTGGGGTTTCCTCCAAACAGTTCGTACCACAAACCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: CVRTSWSPPSSSVGK*LGFPPNSSYHKPCS
Trigger: GCTGCACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS TCA 72 bp GCCCTGTGGTGTGCAGGATGGAGCCGAAGTGACAGTTaGGCTGATCGCCTCCGACCAAGTCATAGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: ALWCAGWSRSDS*ADRLRPSHSLW
Trigger: CCACAGACTATGACTTGGTCGGAGGCGATCAGCTCAACTGTCACTTCGGCTCCATCCTGCACACCACAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000454738.5
CDS CCA 72 bp GCTGATGAAGCAGGGCGAGGCCCGCCGCAATGTCGCTaGGCACCAGATCTGTGTCTGAAAAGTAGGTTGAGA +
Preference number: 6 (lower is better)
Translates to: ADEAGRGPPQCR*APDLCLKSRLR
Trigger: TCTCAACCTACTTTTCAGACACAGATCTGGTGCCCAGCGACATTGCGGCGGGCCTCGCCCTGCTTCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS CCA 72 bp GAGAATGACAGGTGGTCCCTGCTCCTGACACTTCTGTaGAGGATGGCGGGGATGGCACCATCTCCTAGTTCG +
Preference number: 6 (lower is better)
Translates to: ENDRWSLLLTLL*RMAGMAPSPSS
Trigger: CGAACTAGGAGATGGTGCCATCCCCGCCATCCTCCACAGAAGTGTCAGGAGCAGGGACCACCTGTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS CAA 72 bp CTGGGCAGGCTCTTGGTTGTTCCTGATATTGTCCTGTaGCTGATGAAGCAGGGCGAGGCCCGCCGCAATGTC +
Preference number: 6 (lower is better)
Translates to: LGRLLVVPDIVL*LMKQGEARRNV
Trigger: GACATTGCGGCGGGCCTCGCCCTGCTTCATCAGCAACAGGACAATATCAGGAACAACCAAGAGCCTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000454738.5
CDS TCA 72 bp CATGGCAGACCACCTGGGCAGGCTCTTGGTTGTTCCTaGTATTGTCCTGTTGCTGATGAAGCAGGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: HGRPPGQALGCS*YCPVADEAGRG
Trigger: GCCTCGCCCTGCTTCATCAGCAACAGGACAATATCAGGAACAACCAAGAGCCTGCCCAGGTGGTCTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000454738.5
CDS TCA 72 bp GGAGGGTCGCTGGAACACATGAAGTTCAGGCTGCAGTaGGTTATCGTCGCACCACTGGGCAGCAGAGTGAGA +
Preference number: 6 (lower is better)
Translates to: GGSLEHMKFRLQ*VIVAPLGSRVR
Trigger: TCTCACTCTGCTGCCCAGTGGTGCGACGATAACTCACTGCAGCCTGAACTTCATGTGTTCCAGCGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS GCA 72 bp GATGGTGGAAGGAGAACTTCCAGCAACAGCATAGAGTaGCCTGCACTGAGGGTGCAATTCCTCCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: DGGRRTSSNSIE*PALRVQFLPAL
Trigger: GAGAGCCGGGAGGAATTGCACCCTCAGTGCAGGGCACTCTATGCTGTTGCTGGAAGTTCTCCTTCCACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS CAA 72 bp ACTTCCTGGTCGCCCCCGTCCAGCTCCGTGGGCAAGTaGTTGGGGTTTCCTCCAAACAGTTCGTACCACAAA +
Preference number: 6 (lower is better)
Translates to: TSWSPPSSSVGK*LGFPPNSSYHK
Trigger: TTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS TCA 72 bp AGACAAGGCAGGCCCAGCAGAGACTCAAAGATGGGATaGCGCTGTGCACTGATGTGTGAGTCTCTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: RQGRPSRDSKMG*RCALMCESLLG
Trigger: TCCCAGGAGAGACTCACACATCAGTGCACAGCGTCATCCCATCTTTGAGTCTCTGCTGGGCCTGCCTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS GCA 72 bp GTCTGTGGTTCTGCTTCTGCAGCTGACCACGACGGTTaGGATGATGCCGTTTACAACTGTCCTGTCGCACTG +
Preference number: 6 (lower is better)
Translates to: VCGSASAADHDG*DDAVYNCPVAL
Trigger: CAGTGCGACAGGACAGTTGTAAACGGCATCATCGCAACCGTCGTGGTCAGCTGCAGAAGCAGAACCACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432248.1
CDS CCA 72 bp CCTTCCCCATCACACACACGTATTCTAAGGACCCCGTaGCACAGAACCTGTGCCAGGGTTCTGAACAAAGCC +
Preference number: 6 (lower is better)
Translates to: PSPSHTRILRTP*HRTCARVLNKA
Trigger: GGCTTTGTTCAGAACCCTGGCACAGGTTCTGTGCCACGGGGTCCTTAGAATACGTGTGTGTGATGGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS TCA 72 bp ACATCCTTCCCCAGGACGAGTGACACGATGAAGCTCTaGGAATATTCCTGCAGAGCTTTGCTCCACAGCCCC +
Preference number: 6 (lower is better)
Translates to: TSFPRTSDTMKL*EYSCRALLHSP
Trigger: GGGGCTGTGGAGCAAAGCTCTGCAGGAATATTCTCAGAGCTTCATCGTGTCACTCGTCCTGGGGAAGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
ENST00000497308.1
CDS TCA 72 bp CCAGCAGAGACTCAAAGATGGGATGACGCTGTGCACTaGTGTGTGAGTCTCTCCTGGGATCTGAGACTGCAG +
Preference number: 6 (lower is better)
Translates to: PAETQRWDDAVH*CVSLSWDLRLQ
Trigger: CTGCAGTCTCAGATCCCAGGAGAGACTCACACATCAGTGCACAGCGTCATCCCATCTTTGAGTCTCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS CCA 72 bp ACGCTGTCCAAGGCCCGCATCAGGATGTCTGGCATGTaGTCGGTGAGCATCTTCGGACCTATGAGTATTTTG +
Preference number: 6 (lower is better)
Translates to: TLSKARIRMSGM*SVSIFGPMSIL
Trigger: CAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCCTGATGCGGGCCTTGGACAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS TCA 72 bp AGGCTCCACCAGCACAGTCCAGCTTTCCTCTGTGCATaGGATACAACGTCAGAATGCCAATCCACCACAGCA +
Preference number: 6 (lower is better)
Translates to: RLHQHSPAFLCA*DTTSECQSTTA
Trigger: TGCTGTGGTGGATTGGCATTCTGACGTTGTATCTCATGCACAGAGGAAAGCTGGACTGTGCTGGTGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000454738.5
ENST00000479922.6
ENST00000483716.1
CDS TCA 72 bp GACACTGGGGCTACTAGAGGAGGGCAGGGGAAGGAATaGAAACCTAACCACTGGGTACTATGCTCAGTACCT +
Preference number: 6 (lower is better)
Translates to: DTGATRGGQGKE*KPNHWVLCSVP
Trigger: AGGTACTGAGCATAGTACCCAGTGGTTAGGTTTTCATTCCTTCCCCTGCCCTCCTCTAGTAGCCCCAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS GCA 72 bp CCCTCTCAACAAGGCACCCGCTTACCTTGGGTTTATTaGAGTGCGCGACCACTCGCAAGATTCTTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: PSQQGTRLPWVY*SARPLARFFSS
Trigger: TGAAGAGAAGAATCTTGCGAGTGGTCGCGCACTGCAATAAACCCAAGGTAAGCGGGTGCCTTGTTGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS CAA 72 bp ACCCTCTCAACAAGGCACCCGCTTACCTTGGGTTTATaGCAGTGCGCGACCACTCGCAAGATTCTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: TLSTRHPLTLGL*QCATTRKILLF
Trigger: GAAGAGAAGAATCTTGCGAGTGGTCGCGCACTGCAATAAACCCAAGGTAAGCGGGTGCCTTGTTGAGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS CAA 90 bp GCAACCCGAGTATGGTCGTCTTTCCCAATGCAACAGCACAAGAGCTaGATTCTGGTTTCCCACACGCTTGTAGCTGCTGTCTTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: ATRVWSSFPMQQHKS*ILVSHTLVAAVLRP
Trigger: TGGCCTCAAGACAGCAGCTACAAGCGTGTGGGAAACCAGAATCAAGCTCTTGTGCTGTTGCATTGGGAAAGACGACCATACTCGGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS TCA 72 bp GCTGTCTTGAGGCCATTAAGTAACTGGCTTGAATCATaGCTATCCAGGTGGCTGGGGCCGGCAGAGGAATAT +
Preference number: 6 (lower is better)
Translates to: AVLRPLSNWLES*LSRWLGPAEEY
Trigger: ATATTCCTCTGCCGGCCCCAGCCACCTGGATAGTCATGATTCAAGCCAGTTACTTAATGGCCTCAAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS TCA 72 bp TGGGAATCACATCCTTCCCCAGGACGAGTGACACGATaGAGCTCTGAGAATATTCCTGCAGAGCTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: WESHPSPGRVTR*SSENIPAELCS
Trigger: GGAGCAAAGCTCTGCAGGAATATTCTCAGAGCTTCATCGTGTCACTCGTCCTGGGGAAGGATGTGATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
ENST00000497308.1
CDS TCA 72 bp CGGACCTATGAGTATTTTGCTGAATTCCGCTTCGTGTaGCCACTTGGCGCTATAGTGAGCAGCAGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RTYEYFAEFRFV*PLGAIVSSRAA
Trigger: TGCTGCTCTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAGCGGAATTCAGCAAAATACTCATAGGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS GCA 72 bp TCAACAAGGCACCCGCTTACCTTGGGTTTATTGCAGTaGGCGACCACTCGCAAGATTCTTCTCTTCAGATCT +
Preference number: 6 (lower is better)
Translates to: STRHPLTLGLLQ*ATTRKILLFRS
Trigger: AGATCTGAAGAGAAGAATCTTGCGAGTGGTCGCGCACTGCAATAAACCCAAGGTAAGCGGGTGCCTTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497308.1
CDS CAA 72 bp GTATGGTCGTCTTTCCCAATGCAACAGCACAAGAGCTaGATTCTGGTTTCCCACACGCTTGTAGCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: VWSSFPMQQHKS*ILVSHTLVAAV
Trigger: GACAGCAGCTACAAGCGTGTGGGAAACCAGAATCAAGCTCTTGTGCTGTTGCATTGGGAAAGACGACCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS CAA 72 bp ATGTGGTCGGTGAGCATCTTCGGACCTATGAGTATTTaGCTGAATTCCGCTTCGTGTGACCACTTGGCGCTA +
Preference number: 6 (lower is better)
Translates to: MWSVSIFGPMSI*LNSASCDHLAL
Trigger: TAGCGCCAAGTGGTCACACGAAGCGGAATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS GCA 72 bp CCGTGCAGCAAGATCTTGTACTTGGGTTTATTGCAGTaGGCGACCACTCGCAAGATTCTTCTCTTCAGATCT +
Preference number: 6 (lower is better)
Translates to: PCSKILYLGLLQ*ATTRKILLFRS
Trigger: AGATCTGAAGAGAAGAATCTTGCGAGTGGTCGCGCACTGCAATAAACCCAAGTACAAGATCTTGCTGCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CCA 72 bp AAAAGCTCTGCCGTACTCGAAAAAGCAACCCGAGTATaGTCGTCTTTCCCAATGCAACAGCACAAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: KSSAVLEKATRV*SSFPMQQHKSL
Trigger: CAAGCTCTTGTGCTGTTGCATTGGGAAAGACGACCATACTCGGGTTGCTTTTTCGAGTACGGCAGAGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297056.11
ENST00000436575.5
CDS GCA 72 bp TTGGGGTTTCCTCCAAACAGTTCGTACCACAAACCGTaGAGCAAGATCTTGTACTTGGGTTTATTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: LGFPPNSSYHKP*SKILYLGLLQC
Trigger: GCACTGCAATAAACCCAAGTACAAGATCTTGCTGCACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000436575.5
ENST00000462934.5
ENST00000482149.5
CDS CAA 72 bp GAAGGCTTGGCTCAAAATCCCGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGCTTGAGAAATACCCTA +
Preference number: 6 (lower is better)
Translates to: EGLAQNPVVDES*VNVSGSLRNTL
Trigger: TAGGGTATTTCTCAAGCTGCCAGATACGTTTACCAACGACTCATCAACGACGGGATTTTGAGCCAAGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS CAA 90 bp AGGCTGCTGGGTAAAGCACCCAGAGCTGTGATAAGAAACACAAACTaGATGTTAAAGACAGTGGGCCCAAGCATAGAAAAGCGCAAAAAC +
Preference number: 6 (lower is better)
Translates to: RLLGKAPRAVIRNTN*MLKTVGPSIEKRKN
Trigger: GTTTTTGCGCTTTTCTATGCTTGGGCCCACTGTCTTTAACATCAAGTTTGTGTTTCTTATCACAGCTCTGGGTGCTTTACCCAGCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS CAA 90 bp AGCAATGCTGAAGGCTTGGCTCAAAATCCCGTCGTTGATGAGTCGTaGGTAAACGTATCTGGCAGCTTGAGAAATACCCTAAAAACACAG +
Preference number: 6 (lower is better)
Translates to: SNAEGLAQNPVVDES*VNVSGSLRNTLKTQ
Trigger: CTGTGTTTTTAGGGTATTTCTCAAGCTGCCAGATACGTTTACCAACGACTCATCAACGACGGGATTTTGAGCCAAGCCTTCAGCATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS TCA 72 bp AGATCTGTGTCCTCTCATGCTGACACACATGATGGCTaGCACAGTACATATGACAACTGCCAGGAGAATCAT +
Preference number: 6 (lower is better)
Translates to: RSVSSHADTHDG*HSTYDNCQENH
Trigger: ATGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAGCCATCATGTGTGTCAGCATGAGAGGACACAGATCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454738.5
CDS TCA 72 bp ACAAATCGTTCCTCTCATGCTGACACACATGATGGCTaGCACAGTACATATGACAACTGCCAGGAGAATCAT +
Preference number: 6 (lower is better)
Translates to: TNRSSHADTHDG*HSTYDNCQENH
Trigger: ATGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAGCCATCATGTGTGTCAGCATGAGAGGAACGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297056.11
ENST00000425398.6
ENST00000432248.1
ENST00000436575.5
ENST00000479922.6
CDS CAA 72 bp GGTAAAGCACCCAGAGCTGTGATAAGAAACACAAACTaGATGTTAAAGACAGTGGGCCCAAGCATAGAAAAG +
Preference number: 6 (lower is better)
Translates to: GKAPRAVIRNTN*MLKTVGPSIEK
Trigger: CTTTTCTATGCTTGGGCCCACTGTCTTTAACATCAAGTTTGTGTTTCTTATCACAGCTCTGGGTGCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462934.5
CDS TCA 72 bp GTGGCTTTTTCTGTAGCTACACCGTTTTGTGCTGTGTaGACATATCACAATTTACTTCAGCCAAGTTCCTAC +
Preference number: 6 (lower is better)
Translates to: VAFSVATPFCAV*TYHNLLQPSSY
Trigger: GTAGGAACTTGGCTGAAGTAAATTGTGATATGTTCACACAGCACAAAACGGTGTAGCTACAGAAAAAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS GCA 72 bp CATTTCTGTGGCTTTTTCTGTAGCTACACCGTTTTGTaGTGTGTGAACATATCACAATTTACTTCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: HFCGFFCSYTVL*CVNISQFTSAK
Trigger: CTTGGCTGAAGTAAATTGTGATATGTTCACACAGCACAAAACGGTGTAGCTACAGAAAAAGCCACAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS TCA 72 bp CATTTCTCTAAAACAACTACAGAATCCACGAAGTTCTaGATCAAAGACACTGATAAGCATCCACTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: HFSKTTTESTKF*IKDTDKHPLFL
Trigger: CAGGAACAGTGGATGCTTATCAGTGTCTTTGATTCAGAACTTCGTGGATTCTGTAGTTGTTTTAGAGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482149.5
CDS TCA 72 bp TATATTAAAAACTCTCATGCTGACACACATGATGGCTaGCACAGTACATATGACAACTGCCAGGAGAATCAT +
Preference number: 6 (lower is better)
Translates to: YIKNSHADTHDG*HSTYDNCQENH
Trigger: ATGATTCTCCTGGCAGTTGTCATATGTACTGTGTCAGCCATCATGTGTGTCAGCATGAGAGTTTTTAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483716.1
CDS CAA 72 bp AGGATTTCTTTCAGGAGTGAAGAAAATGGTATAAACTaGATGATGGTGATGGCTGCACAACTCTGTGATTAT +
Preference number: 6 (lower is better)
Translates to: RISFRSEENGIN*MMVMAAQLCDY
Trigger: ATAATCACAGAGTTGTGCAGCCATCACCATCATCAAGTTTATACCATTTTCTTCACTCCTGAAAGAAATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483716.1