RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAGLA (Homo sapiens)

Ensembl gene IDs: ENSG00000134780

Ensembl transcript IDs: ENST00000257215.10, ENST00000540717.1

Found 749 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCAGCAGCTCCACCGGGTCCTGGCGGGCCGCCGCCGCAACCACTaGCGACAGCAGCCGCCCCTCCGAGAAGCCCTCCAGGCTCATCTC +
Preference number: 1 (lower is better)
Translates to: QQQLHRVLAGRRRNH*RQQPPLREALQAHL
Trigger: GAGATGAGCCTGGAGGGCTTCTCGGAGGGGCGGCTGCTGTCGCCAGTGGTTGCGGCGGCGGCCCGCCAGGACCCGGTGGAGCTGCTGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp GTGTCCGAGAGGCTCTCCATGGTGGCCAGTGGTGCCCGCCGGGCCTaGAGCTCCGCCGCCAGCCGCTCCTGGGTAGACAGCAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: VSERLSMVASGARRA*SSAASRSWVDSSSS
Trigger: GCTGCTGCTGCTGTCTACCCAGGAGCGGCTGGCGGCGGAGCTGCAGGCCCGGCGGGCACCACTGGCCACCATGGAGAGCCTCTCGGACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp CGCTCAGGAGTGACGCCGCCACTGCCCAGGGCCGCCTCCAGGGGCTaGGTGTCCTGTGAGTGCTTGGACAGGCTGTCGGCCGCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: RSGVTPPLPRAASRG*VSCECLDRLSAASS
Trigger: GCTGCTGGCGGCCGACAGCCTGTCCAAGCACTCACAGGACACGCAGCCCCTGGAGGCGGCCCTGGGCAGTGGCGGCGTCACTCCTGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp GCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGGCCAGTaGTGCCCGCCGGGCCTGCAGCTCCGCCGCCAGCCGCTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: AVQGLSVREALHGGQ*CPPGLQLRRQPLLG
Trigger: ACCCAGGAGCGGCTGGCGGCGGAGCTGCAGGCCCGGCGGGCACCACTGGCCACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 90 bp CCTGGGCCCGGCTGGCCACGCAACTGGGGTGCTAGCGTGCTGAGATaGCCAGCTCATCTTGCTTGGCGGGGCTGGCTCCGTGGCCAGTGG +
Preference number: 1 (lower is better)
Translates to: PGPGWPRNWGASVLR*PAHLAWRGWLRGQW
Trigger: CCACTGGCCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCATCTCAGCACGCTAGCACCCCAGTTGCGTGGCCAGCCGGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 90 bp TCCTGCCTGGGCCCGGCTGGCCACGCAACTGGGGTGCTAGCGTGCTaGGATGACCAGCTCATCTTGCTTGGCGGGGCTGGCTCCGTGGCC +
Preference number: 1 (lower is better)
Translates to: SCLGPAGHATGVLAC*DDQLILLGGAGSVA
Trigger: GGCCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCATCTCAGCACGCTAGCACCCCAGTTGCGTGGCCAGCCGGGCCCAGGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 90 bp CAGCACAGCGTGGAGGCTGGGGGAGCCCCGGATGCTGCGGAAGCCTaGGGAGCGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGA +
Preference number: 1 (lower is better)
Translates to: QHSVEAGGAPDAAEA*GAARVEAVQGLSVR
Trigger: TCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCGCTCCTCAGGCTTCCGCAGCATCCGGGGCTCCCCCAGCCTCCACGCTGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp TCCAGGGCAAGGCCAGTGGGCATGGGCGGCCCCGTGGGGAGTGGCTaGTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGG +
Preference number: 1 (lower is better)
Translates to: SRARPVGMGGPVGSG*CWKMSSGVRSTSVG
Trigger: CCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGCCCACTGGCCTTGCCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp CTTCATCACGCTCCAGCACAGCGTGGAGGCTGGGGGAGCCCCGGATaGTGCGGAAGCCTGAGGAGCGGCGCGAGTCGAAGCTGTACAGGG +
Preference number: 1 (lower is better)
Translates to: LHHAPAQRGGWGSPG*CGSLRSGASRSCTG
Trigger: CCCTGTACAGCTTCGACTCGCGCCGCTCCTCAGGCTTCCGCAGCATCCGGGGCTCCCCCAGCCTCCACGCTGTGCTGGAGCGTGATGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp TTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATaGAGGGCAGTCAGGCTGAGTGTGGCCCACCCAGCAGGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: LPMACPGAGGARMPP*RAVRLSVAHPAGCP
Trigger: TGGGCAGCCTGCTGGGTGGGCCACACTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 90 bp GCAAGGCCAGTGGGCATGGGCGGCCCCGTGGGGAGTGGCTGCTGCTaGAAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACC +
Preference number: 1 (lower is better)
Translates to: ARPVGMGGPVGSGCC*KMSSGVRSTSVGLT
Trigger: GGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGCCCACTGGCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp TGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTaGGCACCAGGTTGGGCTCGAACTGGGCACGGAGCAGGATCTCTT +
Preference number: 1 (lower is better)
Translates to: CPRRGRLSRQRAVGA*APGWARTGHGAGSL
Trigger: AAGAGATCCTGCTCCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp AGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTaGATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCAC +
Preference number: 1 (lower is better)
Translates to: RECMRVCGARLLATD*IWSRPGPWEDRPAH
Trigger: GTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCTCATGCACTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 90 bp GCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTaGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGATGGA +
Preference number: 1 (lower is better)
Translates to: ARLLATDCIWSRPGP*EDRPAHLCCRSGDG
Trigger: TCCATCCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 90 bp TGCATGAGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATaGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGC +
Preference number: 1 (lower is better)
Translates to: CMRVCGARLLATDCI*SRPGPWEDRPAHLC
Trigger: GCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCTCATGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 90 bp GCCCCCTGGCGGGGAGTAGGCAAAGCACTTGAGGGTCGGATACTGTaGGCGCAGAAGGAAGGAGAGGATGGCAGCAGTGCCCGCGCCCAG +
Preference number: 1 (lower is better)
Translates to: APWRGVGKALEGRIL*AQKEGEDGSSARAQ
Trigger: CTGGGCGCGGGCACTGCTGCCATCCTCTCCTTCCTTCTGCGCCCACAGTATCCGACCCTCAAGTGCTTTGCCTACTCCCCGCCAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 90 bp GGCTGCAGGTGGAGCCAGAATGGGAGGGACCATGCCGCTGCAGAATaGAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGTA +
Preference number: 1 (lower is better)
Translates to: GCRWSQNGRDHAAAE*RHEQAVSRAVSASV
Trigger: TACCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTCTGGCTCCACCTGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR TCA 90 bp CGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCGCTACTaGTTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGC +
Preference number: 1 (lower is better)
Translates to: RKRVHEGLWGPAARY*LHMESPRPLGGQAR
Trigger: GCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR GCA 90 bp AGTGATGGGAGGCAGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTaGCAGAATGCCCCCATGGAGGGCAGTCAGGCTGAGTGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: SDGRQLAHGLSWSRG*QNAPMEGSQAECGP
Trigger: TGGGCCACACTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCTGCCTCCCATCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR TCA 90 bp CACAGCAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATaGTGCGGCCGGGCGGGTAGAGTGGAGTGCTGGCTGAGAGGGCTA +
Preference number: 1 (lower is better)
Translates to: HSSSTALQGGCGPRG*CGRAGRVECWLRGL
Trigger: TAGCCCTCTCAGCCAGCACTCCACTCTACCCGCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp TTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTaGCGGAGCAGCACCAGGCCAGCAATGATGTCGGATGGCACAATG +
Preference number: 1 (lower is better)
Translates to: LFASSSTALRLARCR*RSSTRPAMMSDGTM
Trigger: CATTGTGCCATCCGACATCATTGCTGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp ATGTCATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTaGCGCTGCCGGAGCAGCACCAGGCCAGCAATGATGTCGGATGGC +
Preference number: 1 (lower is better)
Translates to: MSLFASSSTALRLAR*RCRSSTRPAMMSDG
Trigger: GCCATCCGACATCATTGCTGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp GGGTCGGATACTGTGGGCGCAGAAGGAAGGAGAGGATGGCAGCAGTaGCCGCGCCCAGGGAGTGGCCCACCACAATCAGGCCGTAGTGTT +
Preference number: 1 (lower is better)
Translates to: GSDTVGAEGRRGWQQ*PRPGSGPPQSGRSV
Trigger: AACACTACGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGGCACTGCTGCCATCCTCTCCTTCCTTCTGCGCCCACAGTATCCGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp GGACAGGCTGTCGGCCGCCAGCAGCTCAGTGCGCGAGCTCAGGGATaGGTTTTCCTCGGGGATGGCAGGGTCAATGTAGAAGAGGTGGCC +
Preference number: 1 (lower is better)
Translates to: GQAVGRQQLSARAQG*VFLGDGRVNVEEVA
Trigger: GGCCACCTCTTCTACATTGACCCTGCCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp CCAGTGGGGGTAGAAGTCCGGATCTTGTCAGCCGCCAGGCATTCCTaGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAG +
Preference number: 1 (lower is better)
Translates to: PVGVEVRILSAARHS*LLRPVGVRSMSSPE
Trigger: CTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGAATGCCTGGCGGCTGACAAGATCCGGACTTCTACCCCCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 90 bp TCCAGGTTGAAGAGGCTGTCGATGAACTCGGCGAATTCCAGCACCTaGGGACTGGGCGAGTCCCCCAGGCGCCCATTGTGCAGCGCCAGC +
Preference number: 1 (lower is better)
Translates to: SRLKRLSMNSANSST*GLGESPRRPLCSAS
Trigger: GCTGGCGCTGCACAATGGGCGCCTGGGGGACTCGCCCAGTCCTCAGGTGCTGGAATTCGCCGAGTTCATCGACAGCCTCTTCAACCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp TGTCCTGTGAGTGCTTGGACAGGCTGTCGGCCGCCAGCAGCTCAGTaGGCGAGCTCAGGGATGGGTTTTCCTCGGGGATGGCAGGGTCAA +
Preference number: 1 (lower is better)
Translates to: CPVSAWTGCRPPAAQ*ASSGMGFPRGWQGQ
Trigger: TTGACCCTGCCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCCTGTCCAAGCACTCACAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp TATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGAAGCCCTATaGGGACCTCAGGCTAAACCGGGACTGCTCCCAGCCCCAGGCCCC +
Preference number: 1 (lower is better)
Translates to: YLPNCFPNPAGEEAL*GPQAKPGLLPAPGP
Trigger: GGGGCCTGGGGCTGGGAGCAGTCCCGGTTTAGCCTGAGGTCCCCATAGGGCTTCCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 90 bp GAGCCAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATaGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGTAGTAGCAGA +
Preference number: 1 (lower is better)
Translates to: EPVGRGRRRASASGT*ATRRQPGQRACSSR
Trigger: TCTGCTACTACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp TCTCTTGCTGGCTGGGGGACTTGGGGCCCTCAGCGTAGTCACTGGTaGGGCTCTCGGGCACCACCATGCAGTAGAGGTCTTGGAAGGAGC +
Preference number: 1 (lower is better)
Translates to: SLAGWGTWGPQRSHW*GSRAPPCSRGLGRS
Trigger: GCTCCTTCCAAGACCTCTACTGCATGGTGGTGCCCGAGAGCCCCACCAGTGACTACGCTGAGGGCCCCAAGTCCCCCAGCCAGCAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp CGTGCTGAGATGACCAGCTCATCTTGCTTGGCGGGGCTGGCTCCGTaGCCAGTGGGGGTAGAAGTCCGGATCTTGTCAGCCGCCAGGCAT +
Preference number: 1 (lower is better)
Translates to: RAEMTSSSCLAGLAP*PVGVEVRILSAARH
Trigger: ATGCCTGGCGGCTGACAAGATCCGGACTTCTACCCCCACTGGCCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCATCTCAGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 90 bp CATCTGACTGGGAGTCCTTCGTCCGCGTGCAGCAGAGGAACACTTTaGGCCGGCGCGACCAGCTGGTGGCTTGACCCTCCTCTAAGCGGT +
Preference number: 1 (lower is better)
Translates to: HLTGSPSSACSRGTL*AGATSWWLDPPLSG
Trigger: ACCGCTTAGAGGAGGGTCAAGCCACCAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCTGCACGCGGACGAAGGACTCCCAGTCAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp GTGGGCAGCCCCAGAGGCCCCTTCCTTAGGAACGGTGCACACTCATaGACATGCATACGCGCCAACACTAGCATGCACACCCTCCCACCC +
Preference number: 1 (lower is better)
Translates to: VGSPRGPFLRNGAHS*TCIRANTSMHTLPP
Trigger: GGGTGGGAGGGTGTGCATGCTAGTGTTGGCGCGTATGCATGTGCATGAGTGTGCACCGTTCCTAAGGAAGGGGCCTCTGGGGCTGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR TCA 90 bp CTGCAGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTaGGGATCCTTGGGGGTAGAAGGTAAGCCAGGAAGTAGCCAGCAG +
Preference number: 1 (lower is better)
Translates to: LQLGWSQQCPPPFGW*GSLGVEGKPGSSQQ
Trigger: CTGCTGGCTACTTCCTGGCTTACCTTCTACCCCCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR TCA 90 bp GGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGTaGCTCCAGGGGCGAACCGCGGCCTCGCAGGACACAGGCAACACG +
Preference number: 1 (lower is better)
Translates to: GWQWHYSHSSCLPRW*LQGRTAASQDTGNT
Trigger: CGTGTTGCCTGTGTCCTGCGAGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp GGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTaGAGTCAGCGCCTCGGTACACACCAGTTTTCCAAAACGGGTCAC +
Preference number: 1 (lower is better)
Translates to: GPCRCRMKARAGGQP*SQRLGTHQFSKTGH
Trigger: GTGACCCGTTTTGGAAAACTGGTGTGTACCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR GCA 90 bp GCCATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTaGGGAAGCCTTCCAGCTGAGAGAGGCCAATCCTGGGGACGAGGT +
Preference number: 1 (lower is better)
Translates to: AIWAWCFAAGHPGAV*GSLPAERGQSWGRG
Trigger: ACCTCGTCCCCAGGATTGGCCTCTCTCAGCTGGAAGGCTTCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp CCAGCAGCTCAGTGCGCGAGCTCAGGGATGGGTTTTCCTCGGGGATaGCAGGGTCAATGTAGAAGAGGTGGCCTTCATCACGCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: PAAQCASSGMGFPRG*QGQCRRGGLHHAPA
Trigger: TGCTGGAGCGTGATGAAGGCCACCTCTTCTACATTGACCCTGCCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 90 bp TTTTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTaGCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCC +
Preference number: 1 (lower is better)
Translates to: FSKTGHSSRRDGNRW*LKLSLSLRPCLKGP
Trigger: GGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR TCA 90 bp TCAGGTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTaGTCACCACTTTCTTCTTGTCATGGTCCACCGCCACGTAGAAGG +
Preference number: 1 (lower is better)
Translates to: SGQSGHPWGTGSPGY*SPLSSCHGPPPRRR
Trigger: CCTTCTACGTGGCGGTGGACCATGACAAGAAGAAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 90 bp CAGTTTTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATaGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGC +
Preference number: 1 (lower is better)
Translates to: QFSKTGHSSRRDGNR*CLKLSLSLRPCLKG
Trigger: GCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 90 bp CGGTACACACCAGTTTTCCAAAACGGGTCACAGCAGCAGGCGCGATaGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTG +
Preference number: 1 (lower is better)
Translates to: RYTPVFQNGSQQQAR*EQMVPKAELVPATL
Trigger: CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAAAACTGGTGTGTACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 90 bp GAGCCCCTCCATGACCACATAGGGCAGGTGCTCATGCAGCATGGCTaGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCAGAT +
Preference number: 1 (lower is better)
Translates to: EPLHDHIGQVLMQHG*RDDHLIEGLVVAPD
Trigger: ATCTGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCATGAGCACCTGCCCTATGTGGTCATGGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGCTGGGTGCCCAGGATTaGGCCCAAGCCTGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGLGAQD*AQACPS
Trigger: GCTGGGGCAGGCTTGGGCTCAATCCTGGGCACCCAG...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CAA 90 bp CCACTGCCCAGGGCCGCCTCCAGGGGCTGCGTGTCCTGTGAGTGCTaGGACAGGCTGTCGGCCGCCAGCAGCTCAGTGCGCGAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: PLPRAASRGCVSCEC*DRLSAASSSVRELR
Trigger: CCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCCTGTCCAAGCACTCACAGGACACGCAGCCCCTGGAGGCGGCCCTGGGCAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGGGTGGCCAGGACGATaGCGGCCTGGACCACAGATG +
Preference number: 2 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGGWPGR*RPGPQM
Trigger: CATCTGTGGTCCAGGCCGGCATCGTCCTGGCCACCC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGTTCCACCCAGGGCACTaGCTCTGCAGCTGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGFHPGH*LCSWGG
Trigger: ACCACCCCAGCTGCAGAGTCAGTGCCCTGGGTGGAA...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCGTCCAGCACGGCGTTaGGCTTGGCCCGCTGCCGCT +
Preference number: 2 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRRPARR*AWPAAA
Trigger: AGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp CAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGGGCCACCCGTAGCACGGCGTTGCGCTTaGCCCGCTGCCGCTGCCGGA +
Preference number: 2 (lower is better)
Translates to: QLAEAAGGLPHQVHGPPVARRCA*PAAAAG
Trigger: TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGC...TACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTGCACAGCGTGGAGGCTaGGGGAGCCCCGGATGCTGC +
Preference number: 2 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRAQRGG*GSPGCC
Trigger: GCAGCATCCGGGGCTCCCCCAGCCTCCACGCTGTGC...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCGAGGAGGGGTCGGCTaGGCCGGCAAAGAGCCGTGG +
Preference number: 2 (lower is better)
Translates to: LATDCIWSRPGPWEDRPARGGVG*AGKEPW
Trigger: CCACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCG...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGAGCAGGCGGTCAGCCGTaGAGTCAGCGCCTCGGTACA +
Preference number: 2 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARAGGQP*SQRLGT
Trigger: TGTACCGAGGCGCTGACTGCACGGCTGACCGCCTGC...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCCCCAGGCCCCTCCCTaGGCAGTGGACAGAGGTCTC +
Preference number: 2 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRPQAPP*AVDRGL
Trigger: GAGACCTCTGTCCACTGCCCAGGGAGGGGCCTGGGG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp TTGGCGGGGCTGGCTCCGTGGCCAGTGGGGGTAGAAGTCCGGATCTaGTCAGCCGCCAGGCATTCCTGGCTACTGAGGCCCGTGGGCGTC +
Preference number: 2 (lower is better)
Translates to: LAGLAPWPVGVEVRI*SAARHSWLLRPVGV
Trigger: GACGCCCACGGGCCTCAGTAGCCAGGAATGCCTGGCGGCTGACAAGATCCGGACTTCTACCCCCACTGGCCACGGAGCCAGCCCCGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp GGATGGCAGCAGTGCCCGCGCCCAGGGAGTGGCCCACCACAATCAGGCCGTAGTCTGGGGGTCCTAAGCTaGGGTAGGGATGCGGACCCC +
Preference number: 2 (lower is better)
Translates to: GWQQCPRPGSGPPQSGRSLGVLS*GRDADP
Trigger: GGGGTCCGCATCCCTACCTCAGCTTAGGACCCCCAG...ACTACGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGGCACTGCTGCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTGGTGACACCAAGGGGTaGGGTGGGGCCCTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGGDTKG*GGALRG
Trigger: TCCTCTGAGGGCCCCACCTCACCCCTTGGTGTCACC...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGAGGGACCATGCCGCTaGAGAATGAAGGCACGAGCA +
Preference number: 2 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGEGPCR*RMKARA
Trigger: TGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCAGTCAGGGCATCCTTaGGGGACAGGGTCCCCCGGA +
Preference number: 2 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRQSGHP*GTGSPG
Trigger: TCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGCCCGCGCCCAGGGAGTaGCCCACCACAATCAGGCCG +
Preference number: 2 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPPAPRE*PTTIRP
Trigger: CGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGG...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGATCCAGAGCCGCGTGCTaGCCAGGGTGGTCACCTCTA +
Preference number: 2 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARSRAAC*PGWSPL
Trigger: TAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGA...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGCCGCCAGGCATTCCTaGCTACTGAGGCCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: SLPMACPGAGGARMPPWRAARHS*LLRPVG
Trigger: GCCCACGGGCCTCAGTAGCCAGGAATGCCTGGCGGC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp TGCCCAGGCCAGCGAGGAGGGAAAGCTGAGGGGAACAGGGGTGTGTaGGTTCCAGATCCCAGGGCCCAGAGCTGCCTAGGCGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CPGQRGGKAEGNRGV*VPDPRAQSCLGVVG
Trigger: CCCCACCACGCCTAGGCAGCTCTGGGCCCTGGGATCTGGAACCAACACACCCCTGTTCCCCTCAGCTTTCCCTCCTCGCTGGCCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGAGAAGGGGCGGCCCTaGCCCCACCCTCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYEKGRP*PHPPLA
Trigger: GGCCAGAGGAGGGTGGGGTCAGGGCCGCCCCTTCTC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGCACCAGGCCAGCAATaGTGTCGGATGGCACAATGT +
Preference number: 2 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGAPGQQ*CRMAQC
Trigger: ACATTGTGCCATCCGACATCATTGCTGGCCTGGTGC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGTGTCTTCCTCGATGGTaGCTCCAGGGGCGAACCGCG +
Preference number: 2 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRCLPRW*LQGRTA
Trigger: CGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACA...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGGCATTCCTGGCTACTaGGGCCCGTGGGCGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SLPMACPGAGGARMPPWRGIPGY*GPWASG
Trigger: ACCTGACGCCCACGGGCCTCAGTAGCCAGGAATGCC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGGGTGGTCACAGCAGTaGCCACCACCCTTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPGWSQQ*PPPFGW
Trigger: CCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGAAGGGGGCTCTCAGTaGCTTCCTTCCACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPEGGSQ*LPSTQG
Trigger: GCCCTGGGTGGAAGGAAGGCACTGAGAGCCCCCTTC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGTGGGCTGCCCCTGGGTaGCCAGGATTGAGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: SLPMACPGAGGARMPPWRWAAPG*PGLSPS
Trigger: GCTTGGGCTCAATCCTGGGCACCCAGGGGCAGCCCA...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGCCGCCAGCAGCTCAGTaGGCGAGCTCAGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELPPAAQ*ASSGMG
Trigger: ACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGG...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGGAGGCAGCTTGCCCATaGCCTGTCCTGGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELEAACP*PVLEQG
Trigger: CCCCTGCTCCAGGACAGGCCATGGGCAAGCTGCCTC...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGAACTCTGCAGCTGGGGTaGTCACAGCAGTGCCCACCA +
Preference number: 2 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARTLQLG*SQQCPP
Trigger: TGGTGGGCACTGCTGTGACCACCCCAGCTGCAGAGT...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCCTGATGGCTCGTCCTaGGGTGGACGACATGCCCAC +
Preference number: 2 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGPDGSS*GGRHAH
Trigger: GTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGG...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGTCGCTGGGGTGGGTCCAGAGCCGCGTGCTGGCCAGGGTGGTCACCTCTACCTTCTCGCCCAAAGGCCTaGGACAGGACCATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: GRWGGSRAACWPGWSPLPSRPKA*DRTISC
Trigger: GCAGGAGATGGTCCTGTCCCAGGCCTTTGGGCGAGA...AGGTAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCCACCCCAGCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCGTTAGGTCGCTGGGGTaGGTCCAGAGCCGCGTGCTG +
Preference number: 2 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGVRSLG*VQSRVL
Trigger: CAGCACGCGGCTCTGGACCCACCCCAGCGACCTAAC...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGCAAGGCCAGTGGGCATaGGCGGCCCCGTGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: RRESKLYRDSVSERLSMVQGQWA*AAPWGV
Trigger: CACTCCCCACGGGGCCGCCCATGCCCACTGGCCTTG...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCGAGAGGCTCTCCATaGTGGCCAGTGGTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGPRGSP*WPVVPA
Trigger: GGCGGGCACCACTGGCCACCATGGAGAGCCTCTCGG...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp CTTGGGCACCAGGTTGGGCTCGAACTGGGCACGGAGCAGGATCTCTaGCTGGCTGGGGGACTTGGGGCCCTCAGCGTAGTCACTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LGHQVGLELGTEQDL*LAGGLGALSVVTGG
Trigger: CCCACCAGTGACTACGCTGAGGGCCCCAAGTCCCCCAGCCAGCAAGAGATCCTGCTCCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCAGCAGAGGAACACTTTaGGCCGGCGCGACCAGCTGG +
Preference number: 2 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGSRGTL*AGATSW
Trigger: CCAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCT...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACAGGGCAGGCCTGGGTaGCCAGGACCCATGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLQGRPG*PGPMGR
Trigger: TCTGCCCATGGGTCCTGGGCACCCAGGCCTGCCCTG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGCCCAGGGCCCAGAGCTaGCTAGGCGTGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: GKLRVAISLTASQTQQGRPRAQS*LGVVGV
Trigger: CACCCCCACCACGCCTAGGCAGCTCTGGGCCCTGGG...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCAGAGGATGGCAGCAGTaGCCGCGCCCAGGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: TPSHPASGETPGRYLPNCRGWQQ*PRPGSG
Trigger: GCCACTCCCTGGGCGCGGGCACTGCTGCCATCCTCT...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCCGCCATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGACAGGCAGGGCAGGCCTaGGTGCCCAGGACCCATGGG +
Preference number: 2 (lower is better)
Translates to: SAIWAWCFAAGHPGAVCGQAGQA*VPRTHG
Trigger: CCCATGGGTCCTGGGCACCCAGGCCTGCCCTGCCTG...TCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGCCGGCGCGACCAGCTaGTGGCTTGACCCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGAGATS*WLDPPL
Trigger: TAGAGGAGGGTCAAGCCACCAGCTGGTCGCGCCGGC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp CTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCGGGTAGAGGAAGGAAGGAGAGGATaGCAGCAGTGCCCGCGCCCA +
Preference number: 2 (lower is better)
Translates to: LLCRVVVDHVDDAAGRVEEGRRG*QQCPRP
Trigger: TGGGCGCGGGCACTGCTGCCATCCTCTCCTTCCTTC...CTCTACCCGCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGAGAGGGTCGGATACTGTaGGCGCAGAAGGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: GRLSRQRAVGAWAPGWAREGRIL*AQKEGE
Trigger: CTCTCCTTCCTTCTGCGCCCACAGTATCCGACCCTC...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGAGAAGGGGCGGCCCTaGCCCCACCCTCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLAEKGRP*PHPPLA
Trigger: GGCCAGAGGAGGGTGGGGTCAGGGCCGCCCCTTCTC...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCCACCCTTTGGGTGGTaGGGATCCTTGGGGGTAGAA +
Preference number: 2 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGPPFGW*GSLGVE
Trigger: TTCTACCCCCAAGGATCCTCACCACCCAAAGGGTGG...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCCGGAAGCCTTCCAGCTaGGAGAGGCCAATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGRKPSS*ERPILG
Trigger: CCCCAGGATTGGCCTCTCTCAGCTGGAAGGCTTCCG...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCTGGTGGCCCCCACGATaGTCCGCCATTTGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGWWPPR*SAIWAW
Trigger: CCAAGCCCAAATGGCGGATCATCGTGGGGGCCACCA...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGGGGCCGCTCAGGAGTaGCGCCGCCACTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAGAAQE*RRHCPG
Trigger: CCCTGGGCAGTGGCGGCGTCACTCCTGAGCGGCCCC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCAGCAGCGATGCCTGTaGCTGAGGCTAAACTGCCCC +
Preference number: 2 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAQQRCL*LRLNCP
Trigger: GGGGCAGTTTAGCCTCAGGCACAGGCATCGCTGCTG...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCTCCTGGAGCAGGGGGTaGCAGAATGCCCCCATGGAG +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGSWSRG*QNAPME
Trigger: CTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGA...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGGAAGGGGGCTCTCAGTaGCTTCCTTCCACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPEGGSQ*LPSTQG
Trigger: GCCCTGGGTGGAAGGAAGGCACTGAGAGCCCCCTTC...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGTTGTCCCTGCGACCCTaGCTCAAAGGCCCCATCATG +
Preference number: 2 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRLSLRP*LKGPIM
Trigger: CATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAA...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTGGCTTGGTGCTTCGCTaGAGGACATCCAGGAGCTGT +
Preference number: 2 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRGLVLR*RTSRSC
Trigger: ACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCC...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGGGTCCAGAGCCGCGTaGTGGCCAGGGTGGTCACCT +
Preference number: 2 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPGSRAA*WPGWSP
Trigger: AGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGGCAGCAGCACTGCTCTaGAGGGTGGTTGTGGACCAC +
Preference number: 2 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELAAALL*RVVVDH
Trigger: GTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTGC...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGACTCTGCAGCTGGGGTaGTCACAGCAGTGCCCACCA +
Preference number: 2 (lower is better)
Translates to: LATDCIWSRPGPWEDRPATLQLG*SQQCPP
Trigger: TGGTGGGCACTGCTGTGACCACCCCAGCTGCAGAGT...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGCCTTCAAGGGCGAGGTaGGTAGGAGCCAGGTTAGGG +
Preference number: 2 (lower is better)
Translates to: SLPMACPGAGGARMPPWRPSRAR*VGARLG
Trigger: CCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGG...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGGCGCGACCAGCTGGTaGCTTGACCCTCCTCTAAGC +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGGATSW*LDPPLS
Trigger: GCTTAGAGGAGGGTCAAGCCACCAGCTGGTCGCGCC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGATCCGCCATTTGGGCTTaGTGCTTCGCTGCAGGACAT +
Preference number: 2 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARSAIWA*CFAAGH
Trigger: ATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp GTGCTGGCCAGGGTGGTCACCTCTACCTCCTCAGGCAGCTCCGACTaGGGGATGCATTTGGTGGCCCCCACGATGATCCGCCATTTGGGC +
Preference number: 2 (lower is better)
Translates to: VLARVVTSTSSGSSD*GMHLVAPTMIRHLG
Trigger: GCCCAAATGGCGGATCATCGTGGGGGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTGAGGAGGTAGAGGTGACCACCCTGGCCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGCTGGGGGTCCTAAGCTaGGGTAGGGATGCGGACCCC +
Preference number: 2 (lower is better)
Translates to: GKLRVAISLTASQTQQGRLGVLS*GRDADP
Trigger: GGGGTCCGCATCCCTACCTCAGCTTAGGACCCCCAG...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGCGAGGAGGGAAAGCTaGGGGGAACAGGGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGARRES*GEQGCV
Trigger: AACACACCCCTGTTCCCCTCAGCTTTCCCTCCTCGC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACATGCCGCTGCAGAATaGAGGCACGAGCAGGCGGTC +
Preference number: 2 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLHAAAE*RHEQAV
Trigger: GACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGGCTCACCCGAGGAGCTaGGCGGGAAGGAGGGCGAGA +
Preference number: 2 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQAHPRS*AGRRAR
Trigger: TCTCGCCCTCCTTCCCGCTCAGCTCCTCGGGTGAGC...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGCAGGGCAGGCCTGGGTaGCCAGGACCCATGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQQGRPG*PGPMGR
Trigger: TCTGCCCATGGGTCCTGGGCACCCAGGCCTGCCCTG...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGCTCGCTACTGATTaGATATGGAGTCGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGLLATD*IWSRPG
Trigger: GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAG...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCTGCTCGCTACTGATTaGATATGGAGTCGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRLLATD*IWSRPG
Trigger: GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTTTGGCCCGCTGCCGCTaGCGGAGCAGCACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLALARCR*RSSTRP
Trigger: TGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAA...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGCTGTTGCGGTGGTCTaGAGTCGGCAGCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPAVAVV*SRQLQG
Trigger: GCCCTGGAGCTGCCGACTGCAGACCACCGCAACAGC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGAGGCAGCTTGCCCATaGCCTGTCCTGGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPEAACP*PVLEQG
Trigger: CCCCTGCTCCAGGACAGGCCATGGGCAAGCTGCCTC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCAGGTGGAGCCAGAATaGGAGGGACCATGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAQVEPE*EGPCRC
Trigger: GCAGCGGCATGGTCCCTCCCATTCTGGCTCCACCTG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp ATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGAAGCCTTCAGGACCGAGCCAGTTaGCAGAGGCCGCAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: IWAWCFAAGHPGAVCGSLQDRAS*QRPQAG
Trigger: GCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTG...AAGGCTTCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCTGGTTGTGGACCACGTaGATGATGCGGCCGGGCGGG +
Preference number: 2 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVWLWTT*MMRPGG
Trigger: CCCGCCCGGCCGCATCATCCACGTGGTCCACAACCA...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGCCGGCAAAGAGCCGTaGGGGCTTGGGCACCAGGTT +
Preference number: 2 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPAGKEP*GLGHQV
Trigger: AACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp TCCAGGAAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTaGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGCGGCCTCGCA +
Preference number: 2 (lower is better)
Translates to: SRKWRRMAMALQPQQ*SSSMVTPGANRGLA
Trigger: TGCGAGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp GAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGCAGAGACCAGCTGGTGGCTTaGCCCTCCTCTAAGCGGTGC +
Preference number: 2 (lower is better)
Translates to: ELRSQVHLGRAHHDLGCRDQLVA*PSSKRC
Trigger: GCACCGCTTAGAGGAGGGTCAAGCCACCAGCTGGTC...TCTGCAGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCAGGGGGTGCCAGAATaGCCCCATGGAGGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: QARWEQMVPKAELVPATLQGVPE*PHGGQS
Trigger: TGACTGCCCTCCATGGGGGCATTCTGGCACCCCCTG...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp TCCGCCATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGACAGGGGGTGCCAGAATaGCCCCATGGAGGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: SAIWAWCFAAGHPGAVCGQGVPE*PHGGQS
Trigger: TGACTGCCCTCCATGGGGGCATTCTGGCACCCCCTG...TCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCTCCTGGAGCAGGGGGTaGCAGAATGCCCCCATGGAG +
Preference number: 2 (lower is better)
Translates to: PKAELVPATLPQRPHHAPSWSRG*QNAPME
Trigger: CTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGA...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTAACGGTGCACACTCATaGACATGCATACGCGCCAAC +
Preference number: 2 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRNGAHS*TCIRAN
Trigger: GTTGGCGCGTATGCATGTGCATGAGTGTGCACCGTT...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGGCAGGCGGTCAGCCGTaGAGTCAGCGCCTCGGTACA +
Preference number: 2 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQAGGQP*SQRLGT
Trigger: TGTACCGAGGCGCTGACTGCACGGCTGACCGCCTGC...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCCGCGCACTTGTGCTaGAGGTCTGGGGATGGAGTG +
Preference number: 2 (lower is better)
Translates to: QARWEQMVPKAELVPATLPAHLC*RSGDGV
Trigger: CACTCCATCCCCAGACCTGCAGCACAAGTGCGCGGG...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCCATCCAGGAGCTGTCTaGGGAAGCCTTCCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGHPGAV*GSLPAE
Trigger: CTCAGCTGGAAGGCTTCCGCAGACAGCTCCTGGATG...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGTCTCGGGCACCACCATaGAGTAGAGGTCTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELSRAPP*SRGLGR
Trigger: CCTTCCAAGACCTCTACTGCATGGTGGTGCCCGAGA...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCACCATACCCCACTCTTaGCCCCACCTCCTACCAACA +
Preference number: 2 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGTIPHS*PHLLPT
Trigger: TGTTGGTAGGAGGTGGGGCCAAGAGTGGGGTATGGT...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTCAGGCCGTAGTGTTTaGTTCCGCGGCCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: TPSHPASGETPGRYLPNCSGRSV*FRGPGL
Trigger: GAGACCTGGGCCGCGGAACCAAACACTACGGCCTGA...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTTGTTGTCGCCCCAGATaGCAAAGTATGTGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGCCRPR*QSMWAP
Trigger: AGGAGCCCACATACTTTGCCATCTGGGGCGACAACA...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCCAGCGTAGTCACTGGTaGGGCTCTCGGGCACCACCA +
Preference number: 2 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPQRSHW*GSRAPP
Trigger: TGGTGGTGCCCGAGAGCCCCACCAGTGACTACGCTG...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGGATCTCTTGCTGGCTaGGGGACTTGGGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPGSLAG*GTWGPQ
Trigger: CTGAGGGCCCCAAGTCCCCCAGCCAGCAAGAGATCC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp CACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTaGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: HSSRRDGNRWCLKLS*SLRPCLKGPIMLPY
Trigger: GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CAA 90 bp GTGGTCACCTCTACCTCCTCAGGCAGCTCCGACTTGGGGATGCATTaGGTGGCCCCCACGATGATCCGCCATTTGGGCTTGGTGCTTCGC +
Preference number: 2 (lower is better)
Translates to: VVTSTSSGSSDLGMH*VAPTMIRHLGLVLR
Trigger: GCGAAGCACCAAGCCCAAATGGCGGATCATCGTGGGGGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTGAGGAGGTAGAGGTGACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCCACCCTTTGGGTGGTaGGGATCCTTGGGGGTAGAA +
Preference number: 2 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAPPFGW*GSLGVE
Trigger: TTCTACCCCCAAGGATCCTCACCACCCAAAGGGTGG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTAGTAGGCAAAGCACTTaGGGGTCGGATACTGTGGGC +
Preference number: 2 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTSRQST*GSDTVG
Trigger: GCCCACAGTATCCGACCCTCAAGTGCTTTGCCTACT...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCCCAGCTCAGCAGCGATaGCTGTGCCTGAGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: TPSHPASGETPGRYLPNCPAQQR*LCLRLN
Trigger: GTTTAGCCTCAGGCACAGGCATCGCTGCTGAGCTGG...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTATTGTCCCTGCGACCCTaGCTCAAAGGCCCCATCATG +
Preference number: 2 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLLSLRP*LKGPIM
Trigger: CATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAA...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTCCCCAGGCCCCTCCCTaGGCAGTGGACAGAGGTCTC +
Preference number: 2 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAPQAPP*AVDRGL
Trigger: GAGACCTCTGTCCACTGCCCAGGGAGGGGCCTGGGG...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGTCTCTCCCTGTGACTaGCCACGGTGCTTGTCAGAT +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGVSPCD*PRCLSD
Trigger: ATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGAC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGCTGCAGGTCTGGGGATaGAGTGGGGGTCGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQLQVWG*SGGRSE
Trigger: CTCAGACCGACCCCCACTCCATCCCCAGACCTGCAG...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCCGCCATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGATCCGCATCAGGTACATaGGCCACCCGTAGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SAIWAWCFAAGHPGAVCGSASGT*ATRRQP
Trigger: TGGCTGCCTACGGGTGGCCCATGTACCTGATGCGGA...TCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGGCCTGGACCACAGATaGGAATACATGTGTCGGGGG +
Preference number: 2 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCGLDHR*EYMCRG
Trigger: CCCCCGACACATGTATTCTCATCTGTGGTCCAGGCC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGGGCCTGGACCACAGATaGGAATACATGTGTCGGGGG +
Preference number: 2 (lower is better)
Translates to: GKLRVAISLTASQTQQGRGLDHR*EYMCRG
Trigger: CCCCCGACACATGTATTCTCATCTGTGGTCCAGGCC...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCTCAGAGGACGGCTACTaGACACATGATTGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCSEDGY*THDWAG
Trigger: CCCCGCCCAATCATGTGTTCAGTAGCCGTCCTCTGA...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCTCAAGTCTCTCCCTGTaGCTGGCCACGGTGCTTGTC +
Preference number: 2 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPSSLSL*LATVLV
Trigger: GACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGA...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCTCAAGTCTCTCCCTGTaGCTGGCCACGGTGCTTGTC +
Preference number: 2 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVSSLSL*LATVLV
Trigger: GACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGA...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR TCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGATCTCTTGTGAATTCTTaGGGTCGAGGTACTTGGTGT +
Preference number: 2 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARSLVNS*GRGTWC
Trigger: ACACCAAGTACCTCGACCTCAAGAATTCACAAGAGA...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGATGCTGCGGAAGCCTaGGGAGCGGCGCGAGTCGAA +
Preference number: 2 (lower is better)
Translates to: FQNGSQQQARWEQMVPKADAAEA*GAARVE
Trigger: TTCGACTCGCGCCGCTCCTCAGGCTTCCGCAGCATC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGGGTGGCCAGGACGATaGCGGCCTGGACCACAGATG +
Preference number: 2 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMGWPGR*RPGPQM
Trigger: CATCTGTGGTCCAGGCCGGCATCGTCCTGGCCACCC...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCAAACATGTACAGCACTaGAGGCCACCTCGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PKAELVPATLPQRPHHAPKHVQH*RPPRQG
Trigger: CCCCTGCCGAGGTGGCCTGCAGTGCTGTACATGTTT...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGCCCAGGGCCCAGAGCTaGCTAGGCGTGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLPRAQS*LGVVGV
Trigger: CACCCCCACCACGCCTAGGCAGCTCTGGGCCCTGGG...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTAGAATGGGAGGGACCATaGCGCTGCAGAATGAAGGCA +
Preference number: 2 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLEWEGP*RCRMKA
Trigger: TGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCAGCAGCAGGCGCGATaGGAACAGATGGTGCCTAAA +
Preference number: 2 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAQQQAR*EQMVPK
Trigger: TTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCAGAGGCTCTCCATGGTaGCCAGTGGTGCCCGCCGGG +
Preference number: 2 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIRGSPW*PVVPAG
Trigger: CCCGGCGGGCACCACTGGCCACCATGGAGAGCCTCT...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCAGGGTGGTCACAGCAGTaGCCACCACCCTTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPGWSQQ*PPPFGW
Trigger: CCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCC...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTAGCACACTCATGCACATaGATACGCGCCAACACTAGC +
Preference number: 2 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLAHSCT*IRANTS
Trigger: GCTAGTGTTGGCGCGTATGCATGTGCATGAGTGTGC...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCACCATACCCCACTCTTaGCCCCACCTCCTACCAACA +
Preference number: 2 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVTIPHS*PHLLPT
Trigger: TGTTGGTAGGAGGTGGGGCCAAGAGTGGGGTATGGT...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACGCGATGGGAACAGATaGTGCCTAAAGCTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLRDGNR*CLKLSL
Trigger: CAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCCCAGCTCATCTTGCTTaGCGGGGCTGGCTCCGTGGC +
Preference number: 2 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIPAHLA*RGWLRG
Trigger: GCCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGG...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp GTAGTCACTGGTGGGGCTCTCGGGCACCACCATGCAGTAGAGGTCTaGGAAGGAGCTGCTCTTGCTGTCCAGGTTGAAGAGGCTGTCGAT +
Preference number: 2 (lower is better)
Translates to: VVTGGALGHHHAVEV*EGAALAVQVEEAVD
Trigger: ATCGACAGCCTCTTCAACCTGGACAGCAAGAGCAGCTCCTTCCAAGACCTCTACTGCATGGTGGTGCCCGAGAGCCCCACCAGTGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp TCCGCCATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGAGGGTCCCCCGGATACTaGTCACCACTTTCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: SAIWAWCFAAGHPGAVCGGSPGY*SPLSSC
Trigger: ACAAGAAGAAAGTGGTGATCAGTATCCGGGGGACCC...TCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGAAACGGTGCACACTCATaGACATGCATACGCGCCAAC +
Preference number: 2 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGNGAHS*TCIRAN
Trigger: GTTGGCGCGTATGCATGTGCATGAGTGTGCACCGTT...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp ATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACGCCAGAATGCCCCCATaGAGGGCAGTCAGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: MALQPQQLSSSMVTPGANARMPP*RAVRLS
Trigger: ACTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGC...GTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGAAGGACGATGCCGGCCTaGACCACAGATGAGAATACA +
Preference number: 2 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGRTMPA*TTDENT
Trigger: TGTATTCTCATCTGTGGTCCAGGCCGGCATCGTCCT...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGGGGAGGAAGCCCTATaGGGACCTCAGGCTAAACCG +
Preference number: 2 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAGEEAL*GPQAKP
Trigger: CGGTTTAGCCTGAGGTCCCCATAGGGCTTCCTCCCC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp ATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGAAGCCTTGGCGCCGGATGGCAATaGCATTACAGCCACAGCAGT +
Preference number: 2 (lower is better)
Translates to: IWAWCFAAGHPGAVCGSLGAGWQ*HYSHSS
Trigger: ACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCC...AAGGCTTCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGCTCATGCAGCATGGCTaGCGAGATGATCACCTCATT +
Preference number: 2 (lower is better)
Translates to: RRESKLYRDSVSERLSMVLMQHG*RDDHLI
Trigger: AATGAGGTGATCATCTCGCCAGCCATGCTGCATGAG...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp CGAGGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTTGGAATACTCCATCGGCGAGGAGGGAAAGCTaGGGGGAACAGGGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: RGLCPEPQQSRTPWNTPSARRES*GEQGCV
Trigger: AACACACCCCTGTTCCCCTCAGCTTTCCCTCCTCGC...CGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCGCCAGAATGCCCCCATaGAGGGCAGTCAGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIARMPP*RAVRLS
Trigger: ACTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGC...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCAGGAAGTGGCGCCGGATaGCAATGGCATTACAGCCAC +
Preference number: 2 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPGSGAG*QWHYSH
Trigger: GTGGCTGTAATGCCATTGCCATCCGGCGCCACTTCC...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp TCATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTaGTCGCCCCAGATGGCAAAGTATGTGGGCTCCTCCTGCTCACAG +
Preference number: 2 (lower is better)
Translates to: SCSMAGEMITSLKAL*SPQMAKYVGSSCSQ
Trigger: CTGTGAGCAGGAGGAGCCCACATACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 90 bp TGCTCATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTaGTTGTCGCCCCAGATGGCAAAGTATGTGGGCTCCTCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: CSCSMAGEMITSLKA*LSPQMAKYVGSSCS
Trigger: TGAGCAGGAGGAGCCCACATACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCATGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCCCAGCTCAGCAGCGATaGCTGTGCCTGAGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIPAQQR*LCLRLN
Trigger: GTTTAGCCTCAGGCACAGGCATCGCTGCTGAGCTGG...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTATGTGGGCTCCTCCTaGTCACAGCAGCAGCACTGC +
Preference number: 2 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIYVGSS*SQQQHC
Trigger: GCAGTGCTGCTGCTGTGAGCAGGAGGAGCCCACATA...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGTCAGATCTTTCATCTaGGAGTCTGTCTTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: RVCGARLLATDCIWSRPGVRSFI*ESVLFS
Trigger: AGAAAACAAGACAGACTCTCAGATGAAAGATCTGAC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR GCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGTGGGGACGAGGTCTTTaGCCAGAACCACAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLWGRGL*PEPQQS
Trigger: TGACTGCTGTGGTTCTGGGCAAAGACCTCGTCCCCA...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR TCA 90 bp CGAGGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTTGGAATACTCCATCGCTTGATGTACTCAGCTaGGAGGACCATACCCTTGTG +
Preference number: 2 (lower is better)
Translates to: RGLCPEPQQSRTPWNTPSLDVLS*EDHTLV
Trigger: CACAAGGGTATGGTCCTCTCAGCTGAGTACATCAAG...CGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR GCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTCCACTGATTTTGTCTTaGTTCTGTGCTGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAPLILS*FCAGLK
Trigger: CTTCAGCCCAGCACAGAAGCAAGACAAAATCAGTGG...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCAGCAATGATGTCGGATaGCACAATGTCAAGGTCCCG +
Preference number: 2 (lower is better)
Translates to: KRPDIKSLPVTGHGACQISNDVG*HNVKVP
Trigger: CGGGACCTTGACATTGTGCCATCCGACATCATTGCT...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp AGGCTCTCCATGGTGGCCAGTGGTGCCCGCCGGGCCTaGAGCTCCGCCGCCAGCCGCTCCTGGGTAGACAGC +
Preference number: 3 (lower is better)
Translates to: RLSMVASGARRA*SSAASRSWVDS
Trigger: GCTGTCTACCCAGGAGCGGCTGGCGGCGGAGCTGCAGGCCCGGCGGGCACCACTGGCCACCATGGAGAGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp TCCTGGGTAGACAGCAGCAGCAGCTCCACCGGGTCCTaGCGGGCCGCCGCCGCAACCACTGGCGACAGCAGC +
Preference number: 3 (lower is better)
Translates to: SWVDSSSSSTGS*RAAAATTGDSS
Trigger: GCTGCTGTCGCCAGTGGTTGCGGCGGCGGCCCGCCAGGACCCGGTGGAGCTGCTGCTGCTGTCTACCCAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGTGTCCTGTGAGTGCTaGGACAGGCTGTCGGCCGCC +
Preference number: 3 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGVSCEC*DRLSAA
Trigger: GGCGGCCGACAGCCTGTCCAAGCACTCACAGGACAC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGATCAGTCAGGGCATCCTaGGGGGACAGGGTCCCCCGG +
Preference number: 3 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARSVRAS*GDRVPR
Trigger: CCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGA...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp GTGGAGGCTGGGGGAGCCCCGGATGCTGCGGAAGCCTaGGGAGCGGCGCGAGTCGAAGCTGTACAGGGACTC +
Preference number: 3 (lower is better)
Translates to: VEAGGAPDAAEA*GAARVEAVQGL
Trigger: GAGTCCCTGTACAGCTTCGACTCGCGCCGCTCCTCAGGCTTCCGCAGCATCCGGGGCTCCCCCAGCCTCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTaGGGATGGAGTGGGGGTCGGTCTGAGCCGAACGGG +
Preference number: 3 (lower is better)
Translates to: LGGQARALVLQV*GWSGGRSEPNG
Trigger: CCCGTTCGGCTCAGACCGACCCCCACTCCATCCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp GTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATaGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCG +
Preference number: 3 (lower is better)
Translates to: VCGARLLATDCI*SRPGPWEDRPA
Trigger: CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp GAGAGGACCATACCCTTGTGGCCCAGCCAGGTGCCGTaGTGCCCCTCCACGGGGAGGCGCTCAGCATCACCC +
Preference number: 3 (lower is better)
Translates to: ERTIPLWPSQVP*CPSTGRRSASP
Trigger: GGGTGATGCTGAGCGCCTCCCCGTGGAGGGGCACCACGGCACCTGGCTGGGCCACAAGGGTATGGTCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CGCTGGGGTGGGTCCAGAGCCGCGTGCTGGCCAGGGTaGTCACCTCTACCTCCTCAGGCAGCTCCGACTTGG +
Preference number: 3 (lower is better)
Translates to: RWGGSRAACWPG*SPLPPQAAPTW
Trigger: CCAAGTCGGAGCTGCCTGAGGAGGTAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCCACCCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp AGGGGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTaGGCACCAGGTTGGGCTCGAACTGGGCACGGAGCA +
Preference number: 3 (lower is better)
Translates to: RGRLSRQRAVGA*APGWARTGHGA
Trigger: TGCTCCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGTCGCTGGGGTGGGTCCAGAGCCGCGTGCTGGCCAGGGTGGTCACCTCTACCTCAGCAGAGGAACACTTaGAGCCGGCGCGACCAGCTG +
Preference number: 3 (lower is better)
Translates to: GRWGGSRAACWPGWSPLPQQRNT*SRRDQL
Trigger: CAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCTG...AGGTAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCCACCCCAGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGAGCACGGCGTTGCGCTaGGCCCGCTGCCGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: QARWEQMVPKAELVPATLSTALR*ARCRCR
Trigger: CCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCT...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp GGCCCGGCTGGCCACGCAACTGGGGTGCTAGCGTGCTaGGATGACCAGCTCATCTTGCTTGGCGGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: GPAGHATGVLAC*DDQLILLGGAG
Trigger: GCCAGCCCCGCCAAGCAAGATGAGCTGGTCATCTCAGCACGCTAGCACCCCAGTTGCGTGGCCAGCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp TCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTaGCGGAGCAGCACCAGGCCAGCAATGATGTCGGAT +
Preference number: 3 (lower is better)
Translates to: SSSTALRLARCR*RSSTRPAMMSD
Trigger: ATCCGACATCATTGCTGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp TTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTaGCGCTGCCGGAGCAGCACCAGGCCAGCAATGATG +
Preference number: 3 (lower is better)
Translates to: FASSSTALRLAR*RCRSSTRPAMM
Trigger: CATCATTGCTGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp CAGCTGAGAGGACCATACCCTTGTGGCCCAGCCAGGTaGCGTGGTGCCCCTCCACGGGGAGGCGCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: QLRGPYPCGPAR*RGAPPRGGAQH
Trigger: ATGCTGAGCGCCTCCCCGTGGAGGGGCACCACGGCACCTGGCTGGGCCACAAGGGTATGGTCCTCTCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp AGGCCAGTGGGCATGGGCGGCCCCGTGGGGAGTGGCTaGTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACC +
Preference number: 3 (lower is better)
Translates to: RPVGMGGPVGSG*CWKMSSGVRST
Trigger: GGTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGCCCACTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATaGAGGGCAGTCAGGCTGAGTGTGGCCCACCCAGCA +
Preference number: 3 (lower is better)
Translates to: ACPGAGGARMPP*RAVRLSVAHPA
Trigger: TGCTGGGTGGGCCACACTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp CTCCCAGGACAGCCATCCAGGCCAGTCCCAGCTGTGTaGGGAGCCGGGGGCCAGAATTCAGGCCCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: LPGQPSRPVPAV*GAGGQNSGPQV
Trigger: TACCTGGGGGCCTGAATTCTGGCCCCCGGCTCCCCACACAGCTGGGACTGGCCTGGATGGCTGTCCTGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp GGGTCGGATACTGTGGGCGCAGAAGGAAGGAGAGGATaGCAGCAGTGCCCGCGCCCAGGGAGTGGCCCACCA +
Preference number: 3 (lower is better)
Translates to: GSDTVGAEGRRG*QQCPRPGSGPP
Trigger: TGGTGGGCCACTCCCTGGGCGCGGGCACTGCTGCCATCCTCTCCTTCCTTCTGCGCCCACAGTATCCGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GGCAAGGCCAGTGGGCATGGGCGGCCCCGTGGGGAGTaGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTC +
Preference number: 3 (lower is better)
Translates to: GKASGHGRPRGE*LLLEDELRSQV
Trigger: GACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGCCCACTGGCCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GGGCACGGAGCAGGATCTCTTGCTGGCTGGGGGACTTaGGGCCCTCAGCGTAGTCACTGGTGGGGCTCTCGG +
Preference number: 3 (lower is better)
Translates to: GHGAGSLAGWGT*GPQRSHWWGSR
Trigger: CCGAGAGCCCCACCAGTGACTACGCTGAGGGCCCCAAGTCCCCCAGCCAGCAAGAGATCCTGCTCCGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACTCGTCCAGCACGGCGTaGCGCTTGGCCCGCTGCCGC +
Preference number: 3 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYSSSTA*RLARCR
Trigger: GCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGGCAGGACCGAGCCAGTaGGCAGAGGCCGCAGGCGGG +
Preference number: 3 (lower is better)
Translates to: QARWEQMVPKAELVPATLAGPSQ*AEAAGG
Trigger: CCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGC...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGAGAGGACCATACCCTaGTGGCCCAGCCAGGTGCCG +
Preference number: 3 (lower is better)
Translates to: SLPMACPGAGGARMPPWRERTIP*WPSQVP
Trigger: CGGCACCTGGCTGGGCCACAAGGGTATGGTCCTCTC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp AGGCAGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTaGCAGAATGCCCCCATGGAGGGCAGTCAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: RQLAHGLSWSRG*QNAPMEGSQAE
Trigger: CTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp GGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATaGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGT +
Preference number: 3 (lower is better)
Translates to: GRGRRRASASGT*ATRRQPGQRAC
Trigger: ACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GCAGGACACAGGCAACACGAGCAGGACCGAGCCAGTTaGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTAC +
Preference number: 3 (lower is better)
Translates to: AGHRQHEQDRAS*QRPQAGFRIRY
Trigger: GTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGCTCGTGTTGCCTGTGTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CCAGGGAGTGGCCCACCACAATCAGGCCGTAGTGTTTaGTTCCGCGGCCCAGGTCTCGCCCAAAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: PGSGPPQSGRSV*FRGPGLAQRPG
Trigger: CCCAGGCCTTTGGGCGAGACCTGGGCCGCGGAACCAAACACTACGGCCTGATTGTGGTGGGCCACTCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GTGCTGGCTGAGAGGGCTATAGTTAGGTCGCTGGGGTaGGTCCAGAGCCGCGTGCTGGCCAGGGTGGTCACC +
Preference number: 3 (lower is better)
Translates to: VLAERAIVRSLG*VQSRVLARVVT
Trigger: GGTGACCACCCTGGCCAGCACGCGGCTCTGGACCCACCCCAGCGACCTAACTATAGCCCTCTCAGCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GTGGGCATGGGCGGCCCCGTGGGGAGTGGCTGCTGCTaGAAGATGAGCTCAGGAGTCAGGTCCACCTCGGTA +
Preference number: 3 (lower is better)
Translates to: VGMGGPVGSGCC*KMSSGVRSTSV
Trigger: TACCGAGGTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp GTGCATGAGGGTCTGTGGGGCCCGGCTGCTCGCTACTaGTTGCATATGGAGTCGCCCAGGCCCCTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: VHEGLWGPAARY*LHMESPRPLGG
Trigger: TCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCTCATGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR TCA 72 bp GGGAGTCCTTCGTCCGCGTGCAGCAGAGGAACACTTTaGGCCGGCGCGACCAGCTGGTGGCTTGACCCTCCT +
Preference number: 3 (lower is better)
Translates to: GSPSSACSRGTL*AGATSWWLDPP
Trigger: AGGAGGGTCAAGCCACCAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCTGCACGCGGACGAAGGACTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp AGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATaGTGCGGCCGGGCGGGTAGAGTGGAGTGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: STALQGGCGPRG*CGRAGRVECWL
Trigger: CAGCCAGCACTCCACTCTACCCGCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp GGCTGGCCACGCAACTGGGGTGCTAGCGTGCTGAGATaGCCAGCTCATCTTGCTTGGCGGGGCTGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: GWPRNWGASVLR*PAHLAWRGWLR
Trigger: ACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCATCTCAGCACGCTAGCACCCCAGTTGCGTGGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp ATGAGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTaGATATGGAGTCGCCCAGGCCCCTGGGAGGACAGG +
Preference number: 3 (lower is better)
Translates to: MRVCGARLLATD*IWSRPGPWEDR
Trigger: CCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR GCA 72 bp CCAAGATGTCATTGTTTGCCTCGTCCAGCACGGCGTTaGGCTTGGCCCGCTGCCGCTGCCGGAGCAGCACCA +
Preference number: 3 (lower is better)
Translates to: PRCHCLPRPARR*AWPAAAAGAAP
Trigger: TGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATGACATCTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp CTGGGACTTGCTCCTGACGCTGCTGTTGCGGTGGTCTaGAGTCGGCAGCTCCAGGGCAAGGCCAGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: LGLAPDAAVAVV*SRQLQGKASGH
Trigger: ATGCCCACTGGCCTTGCCCTGGAGCTGCCGACTGCAGACCACCGCAACAGCAGCGTCAGGAGCAAGTCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp AGTGCTTGGACAGGCTGTCGGCCGCCAGCAGCTCAGTaGGCGAGCTCAGGGATGGGTTTTCCTCGGGGATGG +
Preference number: 3 (lower is better)
Translates to: SAWTGCRPPAAQ*ASSGMGFPRGW
Trigger: CCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCCTGTCCAAGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTaGTCGGGGGAGCCTAGGCCACCCAGGGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: PPGTSDHEREVS*SGEPRPPREAA
Trigger: TGCAGCCTCCCTGGGTGGCCTAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp GGCTGGGGGACTTGGGGCCCTCAGCGTAGTCACTGGTaGGGCTCTCGGGCACCACCATGCAGTAGAGGTCTT +
Preference number: 3 (lower is better)
Translates to: GWGTWGPQRSHW*GSRAPPCSRGL
Trigger: AAGACCTCTACTGCATGGTGGTGCCCGAGAGCCCCACCAGTGACTACGCTGAGGGCCCCAAGTCCCCCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp AGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTaGGCTCGAACTGGGCACGGAGCAGGATCTCTTGCT +
Preference number: 3 (lower is better)
Translates to: SRQRAVGAWAPG*ARTGHGAGSLA
Trigger: AGCAAGAGATCCTGCTCCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGCTGTCGGCCGCCAGCAGCTCAGTGCGCGAGCTCAGGGATGGGTTTTCCTCGGATCCGCCATTTGGGCTaGGTGCTTCGCTGCAGGACA +
Preference number: 3 (lower is better)
Translates to: GCRPPAAQCASSGMGFPRIRHLG*VLRCRT
Trigger: TGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGAT...CCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp TGGAGCCAGAATGGGAGGGACCATGCCGCTGCAGAATaGAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGC +
Preference number: 3 (lower is better)
Translates to: WSQNGRDHAAAE*RHEQAVSRAVS
Trigger: GCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTCTGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTaGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: LATDCIWSRPGP*EDRPAHLCCRS
Trigger: AGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACACGATGATCCGCCATTaGGGCTTGGTGCTTCGCTGC +
Preference number: 3 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHTMIRH*GLVLRC
Trigger: GCAGCGAAGCACCAAGCCCAAATGGCGGATCATCGT...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCAGATCCCAGCCACCTaGGCTCTGGGGGTCCTAAGC +
Preference number: 3 (lower is better)
Translates to: QARWEQMVPKAELVPATLQIPAT*ALGVLS
Trigger: GCTTAGGACCCCCAGAGCCAAGGTGGCTGGGATCTG...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGCAGATCCCAGCCACCTaGGCTCTGGGGGTCCTAAGC +
Preference number: 3 (lower is better)
Translates to: GKLRVAISLTASQTQQGRQIPAT*ALGVLS
Trigger: GCTTAGGACCCCCAGAGCCAAGGTGGCTGGGATCTG...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGTGATGGGAGGCAGCTaGCCCATGGCCTGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYVMGGS*PMACPG
Trigger: TCCAGGACAGGCCATGGGCAAGCTGCCTCCCATCAC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTATGCCTAAAGCTGAGCTaGTCCCTGCGACCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLCLKLS*SLRPCL
Trigger: GAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCA...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGACTGGCCACGGTGCTaGTCAGATCTTTCATCTGAG +
Preference number: 3 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPDWPRC*SDLSSE
Trigger: CTCAGATGAAAGATCTGACAAGCACCGTGGCCAGTC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp CTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCGGGTAGAGCCAAGATGTCATTGTTaGCCTCGTCCAGCACGGCGT +
Preference number: 3 (lower is better)
Translates to: LLCRVVVDHVDDAAGRVEPRCHC*PRPARR
Trigger: ACGCCGTGCTGGACGAGGCAAACAATGACATCTTGG...CTCTACCCGCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGGATGACCAGCTCATCTaGCTTGGCGGGGCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: QARWEQMVPKAELVPATLDDQLI*LGGAGS
Trigger: GGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCATC...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp ACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTaGCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: TGHSSRRDGNRW*LKLSLSLRPCL
Trigger: GAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp GTCGGCCGCCAGCAGCTCAGTGCGCGAGCTCAGGGATaGGTTTTCCTCGGGGATGGCAGGGTCAATGTAGAA +
Preference number: 3 (lower is better)
Translates to: VGRQQLSARAQG*VFLGDGRVNVE
Trigger: TTCTACATTGACCCTGCCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GTAGAAGTCCGGATCTTGTCAGCCGCCAGGCATTCCTaGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGC +
Preference number: 3 (lower is better)
Translates to: VEVRILSAARHS*LLRPVGVRSMS
Trigger: GCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGAATGCCTGGCGGCTGACAAGATCCGGACTTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp ATGACCAGCTCATCTTGCTTGGCGGGGCTGGCTCCGTaGCCAGTGGGGGTAGAAGTCCGGATCTTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: MTSSSCLAGLAP*PVGVEVRILSA
Trigger: GGCTGACAAGATCCGGACTTCTACCCCCACTGGCCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTGTGATGGGAGGCAGCTaGCCCATGGCCTGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFVMGGS*PMACPG
Trigger: TCCAGGACAGGCCATGGGCAAGCTGCCTCCCATCAC...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCAGTGCCCACCACCCTTaGGGTGGTGAGGATCCTTGG +
Preference number: 3 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVSAHHP*GGEDPW
Trigger: CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACT...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGACTGGCCACGGTGCTaGTCAGATCTTTCATCTGAG +
Preference number: 3 (lower is better)
Translates to: LATDCIWSRPGPWEDRPADWPRC*SDLSSE
Trigger: CTCAGATGAAAGATCTGACAAGCACCGTGGCCAGTC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTTTACAGCCACAGCAGTaGTCTTCCTCGATGGTGACT +
Preference number: 3 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRLQPQQ*SSSMVT
Trigger: AGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAA...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp TGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGTaGCTCCAGGGGCGAACCGCGGCCTCGCAGGACACA +
Preference number: 3 (lower is better)
Translates to: WHYSHSSCLPRW*LQGRTAASQDT
Trigger: TGTGTCCTGCGAGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp GCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTaGGGAAGCCTTCCAGCTGAGAGAGGCCAATCCTGG +
Preference number: 3 (lower is better)
Translates to: AWCFAAGHPGAV*GSLPAERGQSW
Trigger: CCAGGATTGGCCTCTCTCAGCTGGAAGGCTTCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp CCCACGATGATCCGCCATTTGGGCTTGGTGCTTCGCTaGAGGACATCCAGGAGCTGTCTGCGGAAGCCTTCC +
Preference number: 3 (lower is better)
Translates to: PTMIRHLGLVLR*RTSRSCLRKPS
Trigger: GGAAGGCTTCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGATCATCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGCAGTCACGAACTCCTaGGAATACTCCATCGCATCC +
Preference number: 3 (lower is better)
Translates to: RVCGARLLATDCIWSRPGAVTNS*EYSIAS
Trigger: GGATGCGATGGAGTATTCCAAGGAGTTCGTGACTGC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGACTTGGGGATGCATTaGGTGGCCCCCACGATGATC +
Preference number: 3 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCDLGMH*VAPTMI
Trigger: GATCATCGTGGGGGCCACCAAATGCATCCCCAAGTC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp GGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTaGGGATCCTTGGGGGTAGAAGGTAAGCCAGGAAGT +
Preference number: 3 (lower is better)
Translates to: GWSQQCPPPFGW*GSLGVEGKPGS
Trigger: ACTTCCTGGCTTACCTTCTACCCCCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR GCA 72 bp GCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTaGTTCCCAAACCCAGCAGGGGAGGAAGCCCTATGG +
Preference number: 3 (lower is better)
Translates to: ASGETPGRYLPN*FPNPAGEEALW
Trigger: CCATAGGGCTTCCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR GCA 72 bp CGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTaGAGTCAGCGCCTCGGTACACACCAGTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: RCRMKARAGGQP*SQRLGTHQFSK
Trigger: TTTGGAAAACTGGTGTGTACCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR GCA 72 bp TTGTCGCCCCAGATGGCAAAGTATGTGGGCTCCTCCTaGTCACAGCAGCAGCACTGCTCTGCAGGGTGGTTG +
Preference number: 3 (lower is better)
Translates to: LSPQMAKYVGSS*SQQQHCSAGWL
Trigger: CAACCACCCTGCAGAGCAGTGCTGCTGCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCTGGGGCGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp CAGCGTAGTCACTGGTGGGGCTCTCGGGCACCACCATaGAGTAGAGGTCTTGGAAGGAGCTGCTCTTGCTGT +
Preference number: 3 (lower is better)
Translates to: QRSHWWGSRAPP*SRGLGRSCSCC
Trigger: ACAGCAAGAGCAGCTCCTTCCAAGACCTCTACTGCATGGTGGTGCCCGAGAGCCCCACCAGTGACTACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp AAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATaGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGC +
Preference number: 3 (lower is better)
Translates to: KTGHSSRRDGNR*CLKLSLSLRPC
Trigger: GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR-3UTR CAA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGAAGGCCAAGATGTCATaGTTTGCCTCGTCCAGCACG +
Preference number: 3 (lower is better)
Translates to: RRESKLYRDSVSERLSMVKAKMS*FASSST
Trigger: CGTGCTGGACGAGGCAAACAATGACATCTTGGCCTT...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGTTGAGGTCGAGGTACTaGGTGTTTCTGGTCACCGGC +
Preference number: 3 (lower is better)
Translates to: GKLRVAISLTASQTQQGRLRSRY*VFLVTG
Trigger: GCCGGTGACCAGAAACACCAAGTACCTCGACCTCAA...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTTGCTCTGCAGGGTGGTaGTGGACCACGTGGATGATG +
Preference number: 3 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLACSAGW*WTTWMM
Trigger: CATCATCCACGTGGTCCACAACCACCCTGCAGAGCA...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp TCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTaGTCACCACTTTCTTCTTGTCATGGTCCACCGCCA +
Preference number: 3 (lower is better)
Translates to: SGHPWGTGSPGY*SPLSSCHGPPP
Trigger: TGGCGGTGGACCATGACAAGAAGAAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CTGCCGGAGCAGCACCAGGCCAGCAATGATGTCGGATaGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAA +
Preference number: 3 (lower is better)
Translates to: LPEQHQASNDVG*HNVKVPEELRK
Trigger: TTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATTGCTGGCCTGGTGCTGCTCCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp ACGATGTCCACCGCAGTCATGTTCTCGTCCAGGAAGTaGCGCCGGATGGCAATGGCATTACAGCCACAGCAG +
Preference number: 3 (lower is better)
Translates to: TMSTAVMFSSRK*RRMAMALQPQQ
Trigger: CTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTTCCTGGACGAGAACATGACTGCGGTGGACATCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CAGTGCGCGAGCTCAGGGATGGGTTTTCCTCGGGGATaGCAGGGTCAATGTAGAAGAGGTGGCCTTCATCAC +
Preference number: 3 (lower is better)
Translates to: QCASSGMGFPRG*QGQCRRGGLHH
Trigger: GTGATGAAGGCCACCTCTTCTACATTGACCCTGCCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR GCA 72 bp AGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTaGCTCAAAGGCCCCATCATGCTCCCCTACCGTTTT +
Preference number: 3 (lower is better)
Translates to: RWCLKLSLSLRP*LKGPIMLPYRF
Trigger: AAAACGGTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp CCGCAGTCATGTTCTCGTCCAGGAAGTGGCGCCGGATaGCAATGGCATTACAGCCACAGCAGTTGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: PQSCSRPGSGAG*QWHYSHSSCLP
Trigger: AGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTTCCTGGACGAGAACATGACTGCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp GGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTTaGAATACTCCATCGCATCCTCACTCAGCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: GLCPEPQQSRTP*NTPSHPHSAGP
Trigger: GGGGCCTGCTGAGTGAGGATGCGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR TCA 72 bp CATCTCCTGCTCCAGTTTCTTCTTGATGTACTCAGCTaGGAGGACCATACCCTTGTGGCCCAGCCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: HLLLQFLLDVLS*EDHTLVAQPGA
Trigger: GGCACCTGGCTGGGCCACAAGGGTATGGTCCTCTCAGCTGAGTACATCAAGAAGAAACTGGAGCAGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CCAGTTTTCCAAAACGGGTCACAGCAGCAGGCGCGATaGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCT +
Preference number: 3 (lower is better)
Translates to: PVFQNGSQQQAR*EQMVPKAELVP
Trigger: AGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAAAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CCA 72 bp TCATGTTCTCGTCCAGGAAGTGGCGCCGGATGGCAATaGCATTACAGCCACAGCAGTTGTCTTCCTCGATGG +
Preference number: 3 (lower is better)
Translates to: SCSRPGSGAGWQ*HYSHSSCLPRW
Trigger: CCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTTCCTGGACGAGAACATGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CCA 72 bp CATGACCACATAGGGCAGGTGCTCATGCAGCATGGCTaGCGAGATGATCACCTCATTGAAGGCCTTGTTGTC +
Preference number: 3 (lower is better)
Translates to: HDHIGQVLMQHG*RDDHLIEGLVV
Trigger: GACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCATGAGCACCTGCCCTATGTGGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR-3UTR CAA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGCCACTGATTTTGTCTaGCTTCTGTGCTGGGCTGAA +
Preference number: 3 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAATDFV*LLCWAE
Trigger: TTCAGCCCAGCACAGAAGCAAGACAAAATCAGTGGC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR GCA 72 bp GCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTaGTTGTCAGATCTTTCATCTGAGAGTCTGTCTTGT +
Preference number: 3 (lower is better)
Translates to: ARHQVSPCDWPR*LSDLSSESLSC
Trigger: ACAAGACAGACTCTCAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGTTGGCCCGCTGCCGCTaGCGGAGCAGCACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGLARCR*RSSTRP
Trigger: TGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAA...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGCTGCCTGGGCCCGGCTaGCCACGCAACTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGLPGPG*PRNWGA
Trigger: AGCACCCCAGTTGCGTGGCCAGCCGGGCCCAGGCAG...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCGCTGGGGTGGGTCCAGAGCCGCGTGCTGGCCAGGGTGGTCACCTCTACCTCGCCGCCGCAACCACTaGCGACAGCAGCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GRWGGSRAACWPGWSPLPRRRNH*RQQPPL
Trigger: GAGGGGCGGCTGCTGTCGCCAGTGGTTGCGGCGGCG...AGGTAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCCACCCCAGCGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GGCTGTCGGCCGCCAGCAGCTCAGTGCGCGAGCTCAGGGATGGGTTTTCCTCGGGAGAAGGGGCGGCCCTaGCCCCACCCTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GCRPPAAQCASSGMGFPREKGRP*PHPPLA
Trigger: GGCCAGAGGAGGGTGGGGTCAGGGCCGCCCCTTCTC...CCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGGACGAGGTCATCACTaGCCACAGACCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGGRGHH*PQTSAA
Trigger: GGCGGCGCTGGTCTGTGGGCAGTGATGACCTCGTCC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCCCAGGCGCCCATTGTaGAGCGCCAGCTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRPRRPL*SASSPR
Trigger: CCGCGGGGAGCTGGCGCTGCACAATGGGCGCCTGGG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGACAGGACCGAGCCAGTTaGCAGAGGCCGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARQDRAS*QRPQAG
Trigger: GCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTG...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCGCTGGGGTGGGTCCAGAGCCGCGTGCTGGCCAGGGTGGTCACCTCTACCTGCATGGGCGGCCCCGTaGGGAGTGGCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRWGGSRAACWPGWSPLPAWAAP*GVAAAG
Trigger: TCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGC...AGGTAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCCACCCCAGCGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGACTTGCTTGGCGGGGCTaGCTCCGTGGCCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARLAWRG*LRGQWG
Trigger: CCCCCACTGGCCACGGAGCCAGCCCCGCCAAGCAAG...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTGGGGCCGCTCAGGAGTaGCGCCGCCACTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTGAAQE*RRHCPG
Trigger: CCCTGGGCAGTGGCGGCGTCACTCCTGAGCGGCCCC...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGCGTCCAGCACGGCGTTaGGCTTGGCCCGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRRPARR*AWPAAA
Trigger: AGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACG...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGTGTGGCCCAGCCAGGTaGCGTGGTGCCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRCGPAR*RGAPPR
Trigger: CCGTGGAGGGGCACCACGGCACCTGGCTGGGCCACA...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGCGGAGCAGGATCTCTTaGTGGCTGGGGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGRSRIS*WLGDLG
Trigger: CCCCAAGTCCCCCAGCCAGCAAGAGATCCTGCTCCG...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCCTCCATGGTGGCCAGTaGTGCCCGCCGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPLHGGQ*CPPGLQ
Trigger: CTGCAGGCCCGGCGGGCACCACTGGCCACCATGGAG...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCAGGCAGGGCAGGCCTaGGTGCCCAGGACCCATGGG +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRQAGQA*VPRTHG
Trigger: CCCATGGGTCCTGGGCACCCAGGCCTGCCCTGCCTG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGAGTCGCCCAGGCCCCTaGGAGGACAGGCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPASRPGP*EDRPAH
Trigger: GTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACT...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGGAGAAGGGGCGGCCCTaGCCCCACCCTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPEKGRP*PHPPLA
Trigger: GGCCAGAGGAGGGTGGGGTCAGGGCCGCCCCTTCTC...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTAGAGGATGGCAGCAGTaGCCGCGCCCAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRRGWQQ*PRPGSG
Trigger: GCCACTCCCTGGGCGCGGGCACTGCTGCCATCCTCT...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGAGGCTCAGTGGGCCTaGTGCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPEAQWA*CSPPPA
Trigger: GGCGGGAGGAGGTGAGCACCAGGCCCACTGAGCCTC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACCCCGCGCCCAGGGAGTaGCCCACCACAATCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHPAPRE*PTTIRP
Trigger: CGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGG...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTCGCCGCCGCAACCACTaGCGACAGCAGCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTRRRNH*RQQPPL
Trigger: GAGGGGCGGCTGCTGTCGCCAGTGGTTGCGGCGGCG...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGGCCGCCAGCCGCTCCTaGGTAGACAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRAASRS*VDSSSS
Trigger: GCTGCTGCTGCTGTCTACCCAGGAGCGGCTGGCGGC...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGCCAGAATGCCCCCATaGAGGGCAGTCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGARMPP*RAVRLS
Trigger: ACTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCTGTCGGCCGCCAGCAGCTCAGTGCGCGAGCTCAGGGATGGGTTTTCCTCGGCCCCAGGCCCCTCCCTaGGCAGTGGACAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GCRPPAAQCASSGMGFPRPQAPP*AVDRGL
Trigger: GAGACCTCTGTCCACTGCCCAGGGAGGGGCCTGGGG...CCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGCTGCTGCTGGAAGATaGGCTCAGGAGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGAAAGR*AQESGP
Trigger: TGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACGCTCACCCGAGGAGCTaGGCGGGAAGGAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHAHPRS*AGRRAR
Trigger: TCTCGCCCTCCTTCCCGCTCAGCTCCTCGGGTGAGC...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGGACGAGGTCATCACTaGCCACAGACCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPGRGHH*PQTSAA
Trigger: GGCGGCGCTGGTCTGTGGGCAGTGATGACCTCGTCC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGGGTCCAGAGCCGCGTaGTGGCCAGGGTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRGSRAA*WPGWSP
Trigger: AGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCGGGTAGAGGGGTCCAGAGCCGCGTaGTGGCCAGGGTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LLCRVVVDHVDDAAGRVEGSRAA*WPGWSP
Trigger: AGGTGACCACCCTGGCCAGCACGCGGCTCTGGACCC...CTCTACCCGCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GGATGGCAGCAGTGCCCGCGCCCAGGGAGTGGCCCACCACAATCAGGCCGTAGTGGGTGGCCAGGACGATaGCGGCCTGGACCACAGATG +
Preference number: 4 (lower is better)
Translates to: GWQQCPRPGSGPPQSGRSGWPGR*RPGPQM
Trigger: CATCTGTGGTCCAGGCCGGCATCGTCCTGGCCACCC...ACTACGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGGCACTGCTGCCATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGAAACATGTACAGCACTaGAGGCCACCTCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGKHVQH*RPPRQG
Trigger: CCCCTGCCGAGGTGGCCTGCAGTGCTGTACATGTTT...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTGCAGGCGGTCAGCCGTaGAGTCAGCGCCTCGGTACA +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGAGGQP*SQRLGT
Trigger: TGTACCGAGGCGCTGACTGCACGGCTGACCGCCTGC...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GCAGGACCGAGCCAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGAGGCTCAGTGGGCCTaGTGCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: AGPSQLAEAAGGLPHQVHEAQWA*CSPPPA
Trigger: GGCGGGAGGAGGTGAGCACCAGGCCCACTGAGCCTC...ATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGTTAGGTCGCTGGGGTaGGTCCAGAGCCGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCLPRPARRCAWPAAAAGVRSLG*VQSRVL
Trigger: CAGCACGCGGCTCTGGACCCACCCCAGCGACCTAAC...TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GGATGGCAGCAGTGCCCGCGCCCAGGGAGTGGCCCACCACAATCAGGCCGTAGTTGGTTGTGGACCACGTaGATGATGCGGCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GWQQCPRPGSGPPQSGRSWLWTT*MMRPGG
Trigger: CCCGCCCGGCCGCATCATCCACGTGGTCCACAACCA...ACTACGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGGCACTGCTGCCATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGCCAGCTCATCTTGCTTaGCGGGGCTGGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRPAHLA*RGWLRG
Trigger: GCCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGG...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCCAGTCCCAGCTGTGTaGGGAGCCGGGGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRPVPAV*GAGGQN
Trigger: ATTCTGGCCCCCGGCTCCCCACACAGCTGGGACTGG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTCTCCCTCTGTCAGGGTaGGCAGGGGCTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRLPLSG*AGAPRT
Trigger: TGTCCTGGGAGCCCCTGCCCACCCTGACAGAGGGAG...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTAGCAGAGGAACACTTTaGGCCGGCGCGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGSRGTL*AGATSW
Trigger: CCAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCT...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTAGCAGAGGAACACTTTaGGCCGGCGCGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRSRGTL*AGATSW
Trigger: CCAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCT...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTTGGTGGCCCCCACGATaGTCCGCCATTTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGWWPPR*SAIWAW
Trigger: CCAAGCCCAAATGGCGGATCATCGTGGGGGCCACCA...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCTGTGGACCACGTGGATaGTGCGGCCGGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGCGPRG*CGRAGR
Trigger: TCTACCCGCCCGGCCGCATCATCCACGTGGTCCACA...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCGGGGCCGCTCAGGAGTaGCGCCGCCACTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGGAAQE*RRHCPG
Trigger: CCCTGGGCAGTGGCGGCGTCACTCCTGAGCGGCCCC...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCGAGGAGGGGTCGGCTaGGCCGGCAAAGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAARGGVG*AGKEPW
Trigger: CCACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp ACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGCGGCCTGCTCAGTGGGCCTGGTaGTCACCTCCTCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: TATAVVFLDGDSRGEPRPAQWAW*SPPPAR
Trigger: GCGGGCGGGAGGAGGTGAGCACCAGGCCCACTGAGC...AGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCTTGGCCCGCTGCCGCTaGCGGAGCAGCACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASLARCR*RSSTRP
Trigger: TGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAA...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGCGTCCAGCACGGCGTTaGGCTTGGCCCGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: RRESKLYRDSVSERLSMVRPARR*AWPAAA
Trigger: AGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACG...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGGGAGCCCCGGATGCTaGGGAAGCCTGAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWGSPGC*GSLRSG
Trigger: GCCGCTCCTCAGGCTTCCGCAGCATCCGGGGCTCCC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCTGGGGGAGCCCCGGATaGTGCGGAAGCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGWGSPG*CGSLRS
Trigger: GCTCCTCAGGCTTCCGCAGCATCCGGGGCTCCCCCA...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCCCGCCAGCAGCTCAGTaGGCGAGCTCAGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGPPAAQ*ASSGMG
Trigger: ACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGG...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGATGCGTGTCCTGTGAGTaGTTGGACAGGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARCVSCE*LDRLSA
Trigger: GGCCGACAGCCTGTCCAAGCACTCACAGGACACGCA...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGCCCAGGCGCCCATTGTaGAGCGCCAGCTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: GKLRVAISLTASQTQQGRPRRPL*SASSPR
Trigger: CCGCGGGGAGCTGGCGCTGCACAATGGGCGCCTGGG...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp ACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGCGGCCTCCCAGGGCCCAGAGCTaGCTAGGCGTGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TATAVVFLDGDSRGEPRPPRAQS*LGVVGV
Trigger: CACCCCCACCACGCCTAGGCAGCTCTGGGCCCTGGG...AGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCAGGCCCGCGCACTTGTaGTGCAGGTCTGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPRPAHL*CRSGDG
Trigger: TCCATCCCCAGACCTGCAGCACAAGTGCGCGGGCCT...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGGCGCGACCAGCTGGTaGCTTGACCCTCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPGATSW*LDPPLS
Trigger: GCTTAGAGGAGGGTCAAGCCACCAGCTGGTCGCGCC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGCACGGCGTTGCGCTTaGCCCGCTGCCGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPARRCA*PAAAAG
Trigger: TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGAGCACGGCGTTGCGCTTaGCCCGCTGCCGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGARRCA*PAAAAG
Trigger: TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGC...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCCCGCGCCCAGGGAGTaGCCCACCACAATCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAPAPRE*PTTIRP
Trigger: CGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACCGGCCCCGTGGGGAGTaGCTGCTGCTGGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHRPRGE*LLLEDE
Trigger: CTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGCAAGGCCAGTGGGCATaGGCGGCCCCGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWQGQWA*AAPWGV
Trigger: CACTCCCCACGGGGCCGCCCATGCCCACTGGCCTTG...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGCACAGCGTGGAGGCTaGGGGAGCCCCGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWAQRGG*GSPGCC
Trigger: GCAGCATCCGGGGCTCCCCCAGCCTCCACGCTGTGC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGCGCTCCAGCACAGCGTaGAGGCTGGGGGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GKLRVAISLTASQTQQGRRSSTA*RLGEPR
Trigger: CCGGGGCTCCCCCAGCCTCCACGCTGTGCTGGAGCG...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCCAGCACCTGAGGACTaGGCGAGTCCCCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASPAPED*ASPPGA
Trigger: GGCGCCTGGGGGACTCGCCCAGTCCTCAGGTGCTGG...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGCCTCAGCGTAGTCACTaGTGGGGCTCTCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRPQRSH*WGSRAP
Trigger: TGGTGCCCGAGAGCCCCACCAGTGACTACGCTGAGG...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGCTGGCTGGGGGACTTaGGGCCCTCAGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRAGWGT*GPQRSH
Trigger: GTGACTACGCTGAGGGCCCCAAGTCCCCCAGCCAGC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGGATCTCTTGCTGGCTaGGGGACTTGGGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HCLPRPARRCAWPAAAAGGSLAG*GTWGPQ
Trigger: CTGAGGGCCCCAAGTCCCCCAGCCAGCAAGAGATCC...TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTAGCAGGATCTCTTGCTaGCTGGGGGACTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRSRISC*LGDLGP
Trigger: GGGCCCCAAGTCCCCCAGCCAGCAAGAGATCCTGCT...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GCAGGACCGAGCCAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATCCAGCTCATCTTGCTTaGCGGGGCTGGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: AGPSQLAEAAGGLPHQVHPAHLA*RGWLRG
Trigger: GCCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGG...ATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGCAGCAGCAGGCGCGATaGGAACAGATGGTGCCTAAA +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGQQQAR*EQMVPK
Trigger: TTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTG...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCCTTGTGCTGCAGGTCTaGGGATGGAGTGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPLVLQV*GWSGGR
Trigger: CCGACCCCCACTCCATCCCCAGACCTGCAGCACAAG...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGACTTGTGCTGCAGGTCTaGGGATGGAGTGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: HCLPRPARRCAWPAAAAGLVLQV*GWSGGR
Trigger: CCGACCCCCACTCCATCCCCAGACCTGCAGCACAAG...TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACGTGCATGAGGGTCTGTaGGGCCCGGCTGCTCGCTAC +
Preference number: 4 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHVHEGL*GPAARY
Trigger: GTAGCGAGCAGCCGGGCCCCACAGACCCTCATGCAC...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp ATGTCATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTaGGCCCGCTGCCGCTGCCGGAGCAGCACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: MSLFASSSTALR*ARCRCRSSTRP
Trigger: TGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp GCCAAGATGTCATTGTTTGCCTCGTCCAGCACGGCGTaGCGCTTGGCCCGCTGCCGCTGCCGGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: AKMSLFASSSTA*RLARCRCRSST
Trigger: GGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATGACATCTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp CGCAGGACACAGGCAACACGAGCAGGACCGAGCCAGTaGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: RRTQATRAGPSQ*AEAAGGLPHQV
Trigger: TACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGCTCGTGTTGCCTGTGTCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp GAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTaGGGCTCGAACTGGGCACGGAGCAGGATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: EPAKSRGGLGTR*GSNWARSRISC
Trigger: GCAAGAGATCCTGCTCCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGGGCCACCCGTATGGTGGCTCTCAGCTTaGCAAAGGTGCGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QLAEAAGGLPHQVHGPPVWWLSA*QRCGPW
Trigger: CCACGGGCCGCACCTTTGTCAAGCTGAGAGCCACCA...TACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGGGGCTGCGTGTCCTGTaGGTGCTTGGACAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELGLRVL*VLGQAV
Trigger: GACAGCCTGTCCAAGCACTCACAGGACACGCAGCCC...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCGCTCACCCGAGGAGCTaGGCGGGAAGGAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASAHPRS*AGRRAR
Trigger: TCTCGCCCTCCTTCCCGCTCAGCTCCTCGGGTGAGC...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGGGCATTCCTGGCTACTaGGGCCCGTGGGCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPGIPGY*GPWASG
Trigger: ACCTGACGCCCACGGGCCTCAGTAGCCAGGAATGCC...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGCTGGGGGTCCTAAGCTaGGGTAGGGATGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPLGVLS*GRDADP
Trigger: GGGGTCCGCATCCCTACCTCAGCTTAGGACCCCCAG...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp ACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGCGGCCTCTGGGTGCCCAGGATTaGGCCCAAGCCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TATAVVFLDGDSRGEPRPLGAQD*AQACPS
Trigger: GCTGGGGCAGGCTTGGGCTCAATCCTGGGCACCCAG...AGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCGCTCAGTGGGCCTGGTaGTCACCTCCTCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVAQWAW*SPPPAR
Trigger: GCGGGCGGGAGGAGGTGAGCACCAGGCCCACTGAGC...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGGCTCCGTGTAGAGGATaGCCCCGCGCATGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPAPCRG*PRACSA
Trigger: GGCTGAGCATGCGCGGGGGCATCCTCTACACGGAGC...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTGCTCCGACTTGGGGATaGATTTGGTGGCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGAPTWG*IWWPPR
Trigger: TCGTGGGGGCCACCAAATGCATCCCCAAGTCGGAGC...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGAGGGCGAGAGTGAGATaGCCGAGGAGGGGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPRARVR*PRRGRL
Trigger: CAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCT...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCAGGGCGAGAGTGAGATaGCCGAGGAGGGGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGRARVR*PRRGRL
Trigger: CAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCT...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGGGTGGTCACAGCAGTaGCCACCACCCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAGWSQQ*PPPFGW
Trigger: CCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGAAGGGGGCTCTCAGTaGCTTCCTTCCACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAEGGSQ*LPSTQG
Trigger: GCCCTGGGTGGAAGGAAGGCACTGAGAGCCCCCTTC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCCAGGGCCCAGAGCTaGCTAGGCGTGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QARWEQMVPKAELVPATLPRAQS*LGVVGV
Trigger: CACCCCCACCACGCCTAGGCAGCTCTGGGCCCTGGG...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGGCACACTCATGCACATaGATACGCGCCAACACTAGC +
Preference number: 4 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGAHSCT*IRANTS
Trigger: GCTAGTGTTGGCGCGTATGCATGTGCATGAGTGTGC...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGCCCGCGCACTTGTGCTaGAGGTCTGGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRPAHLC*RSGDGV
Trigger: CACTCCATCCCCAGACCTGCAGCACAAGTGCGCGGG...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCGATCCCGGGCATGGCTaGTGGCTCTGCAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGDPGHG*WLCRGS
Trigger: TGAGCCTCTGCAGAGCCACCAGCCATGCCCGGGATC...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGCAAAGGTGCGGCCCGTaGGGTCGAAGACGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRQRCGP*GRRRRG
Trigger: TCCTCTGCGTCTTCGACCCCACGGGCCGCACCTTTG...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCAGGACCGAGCCAGTTaGCAGAGGCCGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCQDRAS*QRPQAG
Trigger: GCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTG...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGGGCCACCCGTAGAAGGAAGGAGAGGATaGCAGCAGTGCCCGCGCCCA +
Preference number: 4 (lower is better)
Translates to: QLAEAAGGLPHQVHGPPVEGRRG*QQCPRP
Trigger: TGGGCGCGGGCACTGCTGCCATCCTCTCCTTCCTTC...TACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCGGGTAGAGTCCAGAGCCGCGTGCTaGCCAGGGTGGTCACCTCTA +
Preference number: 4 (lower is better)
Translates to: LLCRVVVDHVDDAAGRVESRAAC*PGWSPL
Trigger: TAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGA...CTCTACCCGCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp ACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGCGGCCTAGAGGCTCTCCATGGTaGCCAGTGGTGCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: TATAVVFLDGDSRGEPRPRGSPW*PVVPAG
Trigger: CCCGGCGGGCACCACTGGCCACCATGGAGAGCCTCT...AGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGCGCTCCAGCACAGCGTaGAGGCTGGGGGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQRSSTA*RLGEPR
Trigger: CCGGGGCTCCCCCAGCCTCCACGCTGTGCTGGAGCG...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTTGTCCTGTGAGTGCTTaGACAGGCTGTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGCPVSA*TGCRPP
Trigger: TGGCGGCCGACAGCCTGTCCAAGCACTCACAGGACA...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCTGTCCTGTGAGTGCTTaGACAGGCTGTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPCPVSA*TGCRPP
Trigger: TGGCGGCCGACAGCCTGTCCAAGCACTCACAGGACA...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGGGCCACCCGTACAGCGTAGTCACTGGTaGGGCTCTCGGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: QLAEAAGGLPHQVHGPPVQRSHW*GSRAPP
Trigger: TGGTGGTGCCCGAGAGCCCCACCAGTGACTACGCTG...TACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGCTTGGGCACCAGGTTaGGCTCGAACTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRAWAPG*ARTGHG
Trigger: TCCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTGCCGCCAGGCATTCCTaGCTACTGAGGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAAARHS*LLRPVG
Trigger: GCCCACGGGCCTCAGTAGCCAGGAATGCCTGGCGGC...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCCTTGCTTGGCGGGGCTaGCTCCGTGGCCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPLAWRG*LRGQWG
Trigger: CCCCCACTGGCCACGGAGCCAGCCCCGCCAAGCAAG...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGCAGCACCAGGAGGACGATGCCGGCCTaGACCACAGATGAGAATACA +
Preference number: 4 (lower is better)
Translates to: SSSTALRLARCRCRSSTRRTMPA*TTDENT
Trigger: TGTATTCTCATCTGTGGTCCAGGCCGGCATCGTCCT...CCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCAGGCAGGGCAGGCCTaGGTGCCCAGGACCCATGGG +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCQAGQA*VPRTHG
Trigger: CCCATGGGTCCTGGGCACCCAGGCCTGCCCTGCCTG...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCCAGGTGGAGCCAGAATaGGAGGGACCATGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGQVEPE*EGPCRC
Trigger: GCAGCGGCATGGTCCCTCCCATTCTGGCTCCACCTG...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp CAGGTTGGGCTCGAACTGGGCACGGAGCAGGATCTCTaGCTGGCTGGGGGACTTGGGGCCCTCAGCGTAGTC +
Preference number: 4 (lower is better)
Translates to: QVGLELGTEQDL*LAGGLGALSVV
Trigger: GACTACGCTGAGGGCCCCAAGTCCCCCAGCCAGCAAGAGATCCTGCTCCGTGCCCAGTTCGAGCCCAACCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp CTGGCTCCGTGGCCAGTGGGGGTAGAAGTCCGGATCTaGTCAGCCGCCAGGCATTCCTGGCTACTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LAPWPVGVEVRI*SAARHSWLLRP
Trigger: GGGCCTCAGTAGCCAGGAATGCCTGGCGGCTGACAAGATCCGGACTTCTACCCCCACTGGCCACGGAGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCGATGCTGCGGAAGCCTaGGGAGCGGCGCGAGTCGAA +
Preference number: 4 (lower is better)
Translates to: TPSHPASGETPGRYLPNCDAAEA*GAARVE
Trigger: TTCGACTCGCGCCGCTCCTCAGGCTTCCGCAGCATC...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCGAAGGAGGGCGAGAGTaGGATGCCCGAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASEGGRE*DARGGV
Trigger: GACCCCTCCTCGGGCATCTCACTCTCGCCCTCCTTC...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCCTGGGGGTCCTAAGCTaGGGTAGGGATGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: TPSHPASGETPGRYLPNCLGVLS*GRDADP
Trigger: GGGGTCCGCATCCCTACCTCAGCTTAGGACCCCCAG...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGACCACCCTTTGGGTGGTaGGGATCCTTGGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: HCLPRPARRCAWPAAAAGPPFGW*GSLGVE
Trigger: TTCTACCCCCAAGGATCCTCACCACCCAAAGGGTGG...TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTTCCACCCAGGGCACTaGCTCTGCAGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTFHPGH*LCSWGG
Trigger: ACCACCCCAGCTGCAGAGTCAGTGCCCTGGGTGGAA...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTGGTGACACCAAGGGGTaGGGTGGGGCCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAGDTKG*GGALRG
Trigger: TCCTCTGAGGGCCCCACCTCACCCCTTGGTGTCACC...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GCAGGACCGAGCCAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGCGAGGAGGGAAAGCTaGGGGGAACAGGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: AGPSQLAEAAGGLPHQVHARRES*GEQGCV
Trigger: AACACACCCCTGTTCCCCTCAGCTTTCCCTCCTCGC...ATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTGGGTGCCCAGGATTaGGCCCAAGCCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCLGAQD*AQACPS
Trigger: GCTGGGGCAGGCTTGGGCTCAATCCTGGGCACCCAG...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGACCATCTCAGCGATCATaGAGCTCAGCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARPSQRS*SSAGCP
Trigger: TGGGCATCCTGCTGAGCTGCATGATCGCTGAGATGG...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTTGTGGCCCAGCCAGGTaGCGTGGTGCCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFCGPAR*RGAPPR
Trigger: CCGTGGAGGGGCACCACGGCACCTGGCTGGGCCACA...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGAGGATGGCAGCAGTaGCCGCGCCCAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPRGWQQ*PRPGSG
Trigger: GCCACTCCCTGGGCGCGGGCACTGCTGCCATCCTCT...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGCCCGTGGGGAGTGGCTaGTGCTGGAAGATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELPVGSG*CWKMSS
Trigger: TGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGG...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCGCTGTTGCGGTGGTCTaGAGTCGGCAGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASAVAVV*SRQLQG
Trigger: GCCCTGGAGCTGCCGACTGCAGACCACCGCAACAGC...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGGGGAGCCCCGGATGCTaGGGAAGCCTGAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQGSPGC*GSLRSG
Trigger: GCCGCTCCTCAGGCTTCCGCAGCATCCGGGGCTCCC...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCGGGTAGAGATGACCAGCTCATCTTaGTTGGCGGGGCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LLCRVVVDHVDDAAGRVEMTSSS*LAGLAP
Trigger: CGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCAT...CTCTACCCGCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGGGTGGCCAGGACGATaGCGGCCTGGACCACAGATG +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWGWPGR*RPGPQM
Trigger: CATCTGTGGTCCAGGCCGGCATCGTCCTGGCCACCC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCAGGGCAGGCCTGGGTaGCCAGGACCCATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCQGRPG*PGPMGR
Trigger: TCTGCCCATGGGTCCTGGGCACCCAGGCCTGCCCTG...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTTGGGCTGCCCCTGGGTaGCCAGGATTGAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAWAAPG*PGLSPS
Trigger: GCTTGGGCTCAATCCTGGGCACCCAGGGGCAGCCCA...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTTGGAGGAGGGAGACGTaGAGCAGGCCCATCCTTCAA +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRWRRET*SRPILQ
Trigger: TTGAAGGATGGGCCTGCTGCACGTCTCCCTCCTCCA...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGTTCTCGTCCAGGAAGTaGCGCCGGATGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRFSSRK*RRMAMA
Trigger: TGCCATTGCCATCCGGCGCCACTTCCTGGACGAGAA...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTTTCTCGTCCAGGAAGTaGCGCCGGATGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGFSSRK*RRMAMA
Trigger: TGCCATTGCCATCCGGCGCCACTTCCTGGACGAGAA...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCAGTCAGGGCATCCTTaGGGGACAGGGTCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAQSGHP*GTGSPG
Trigger: TCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGTCTCGCCCAAAGGCCTaGGACAGGACCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPASRPKA*DRTISC
Trigger: GCAGGAGATGGTCCTGTCCCAGGCCTTTGGGCGAGA...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGGCGTGCTGGCCAGGGTaGTCACCTCTACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPACWPG*SPLPPQ
Trigger: CTGAGGAGGTAGAGGTGACCACCCTGGCCAGCACGC...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGTTAGGTCGCTGGGGTaGGTCCAGAGCCGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWVRSLG*VQSRVL
Trigger: CAGCACGCGGCTCTGGACCCACCCCAGCGACCTAAC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGCTCCATGGTGGCCAGTaGTGCCCGCCGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQLHGGQ*CPPGLQ
Trigger: CTGCAGGCCCGGCGGGCACCACTGGCCACCATGGAG...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGCCGAGAGGCTCTCCATaGTGGCCAGTGGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GKLRVAISLTASQTQQGRPRGSP*WPVVPA
Trigger: GGCGGGCACCACTGGCCACCATGGAGAGCCTCTCGG...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCCGAGAGGCTCTCCATaGTGGCCAGTGGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCPRGSP*WPVVPA
Trigger: GGCGGGCACCACTGGCCACCATGGAGAGCCTCTCGG...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCGAGGCAGCTTGCCCATaGCCTGTCCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASEAACP*PVLEQG
Trigger: CCCCTGCTCCAGGACAGGCCATGGGCAAGCTGCCTC...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGCCCCAGGCCCCTCCCTaGGCAGTGGACAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GKLRVAISLTASQTQQGRPQAPP*AVDRGL
Trigger: GAGACCTCTGTCCACTGCCCAGGGAGGGGCCTGGGG...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGGGGAGGAAGCCCTATaGGGACCTCAGGCTAAACCG +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRGEEAL*GPQAKP
Trigger: CGGTTTAGCCTGAGGTCCCCATAGGGCTTCCTCCCC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCTGATGGCTCGTCCTaGGGTGGACGACATGCCCAC +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGPDGSS*GGRHAH
Trigger: GTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGG...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGGCTACTGATTGCATATaGAGTCGCCCAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRATDCI*SRPGPW
Trigger: CCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGC...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGCTGTCGGCCGCCAGCAGCTCAGTGCGCGAGCTCAGGGATGGGTTTTCCTCGGCCACGATGGCGTAGATaGACTCGATCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GCRPPAAQCASSGMGFPRPRWRR*TRSPGW
Trigger: CCATCCTGGTGATCGAGTTCATCTACGCCATCGTGG...CCGAGGAAAACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGGCCGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCGACCAGCTGGTGGCTTaGCCCTCCTCTAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TPSHPASGETPGRYLPNCDQLVA*PSSKRC
Trigger: GCACCGCTTAGAGGAGGGTCAAGCCACCAGCTGGTC...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTGCACCAGGCCAGCAATaGTGTCGGATGGCACAATGT +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGAPGQQ*CRMAQC
Trigger: ACATTGTGCCATCCGACATCATTGCTGGCCTGGTGC...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACGGAAGCCTTCCAGCTaGGAGAGGCCAATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLRKPSS*ERPILG
Trigger: CCCCAGGATTGGCCTCTCTCAGCTGGAAGGCTTCCG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTTGGTGGCCCCCACGATaGTCCGCCATTTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAWWPPR*SAIWAW
Trigger: CCAAGCCCAAATGGCGGATCATCGTGGGGGCCACCA...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACTGTGGACCACGTGGATaGTGCGGCCGGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYCGPRG*CGRAGR
Trigger: TCTACCCGCCCGGCCGCATCATCCACGTGGTCCACA...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGCAGAGATGCTGCGGAAGCCTaGGGAGCGGCGCGAGTCGAA +
Preference number: 4 (lower is better)
Translates to: ELRSQVHLGRAHHDLGCRDAAEA*GAARVE
Trigger: TTCGACTCGCGCCGCTCCTCAGGCTTCCGCAGCATC...TCTGCAGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGCGAATTCCAGCACCTaGGGACTGGGCGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYANSST*GLGESP
Trigger: GGGGGACTCGCCCAGTCCTCAGGTGCTGGAATTCGC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCGGCATTCCTGGCTACTaGGGCCCGTGGGCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVGIPGY*GPWASG
Trigger: ACCTGACGCCCACGGGCCTCAGTAGCCAGGAATGCC...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACGGGGTGCTAGCGTGCTaGGATGACCAGCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHGVLAC*DDQLIL
Trigger: CAAGATGAGCTGGTCATCTCAGCACGCTAGCACCCC...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGTCAGAGGACGGCTACTaGACACATGATTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELSEDGY*THDWAG
Trigger: CCCCGCCCAATCATGTGTTCAGTAGCCGTCCTCTGA...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGGTGACACCAAGGGGTaGGGTGGGGCCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYGDTKG*GGALRG
Trigger: TCCTCTGAGGGCCCCACCTCACCCCTTGGTGTCACC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGCCGGCTGCTCGCTACTaGTTGCATATGGAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPPAARY*LHMESP
Trigger: GGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGG...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACTGCAGCTCAGCAGGATaGCCAGGTAGCCGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYCSSAG*PGSRGR
Trigger: ACGGCCGCGGCTACCTGGGCATCCTGCTGAGCTGCA...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTGTCCGCAGGTTACGCTaGCTCCTCTTGGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTVRRLR*LLLVAL
Trigger: GAGAGCCACCAAGAGGAGGCAGCGTAACCTGCGGAC...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGTATGTGGGCTCCTCCTaGTCACAGCAGCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAYVGSS*SQQQHC
Trigger: GCAGTGCTGCTGCTGTGAGCAGGAGGAGCCCACATA...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGCCAGCAGCTCAGTaGGCGAGCTCAGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVPPAAQ*ASSGMG
Trigger: ACCCATCCCTGAGCTCGCGCACTGAGCTGCTGGCGG...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGATGACCAGCTCATCTTaGTTGGCGGGGCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPMTSSS*LAGLAP
Trigger: CGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCAT...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTCAGCAGCGATGCCTGTaGCTGAGGCTAAACTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTQQRCL*LRLNCP
Trigger: GGGGCAGTTTAGCCTCAGGCACAGGCATCGCTGCTG...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGGGCCACCCGTACCAGCTCAGCAGCGATaGCTGTGCCTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: QLAEAAGGLPHQVHGPPVPAQQR*LCLRLN
Trigger: GTTTAGCCTCAGGCACAGGCATCGCTGCTGAGCTGG...TACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAGGGGGTGCCAGAATaGCCCCATGGAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASQGVPE*PHGGQS
Trigger: TGACTGCCCTCCATGGGGGCATTCTGGCACCCCCTG...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTCAGGGCAGGCCTGGGTaGCCAGGACCCATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFQGRPG*PGPMGR
Trigger: TCTGCCCATGGGTCCTGGGCACCCAGGCCTGCCCTG...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTGAAGGGGGCTCTCAGTaGCTTCCTTCCACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAEGGSQ*LPSTQG
Trigger: GCCCTGGGTGGAAGGAAGGCACTGAGAGCCCCCTTC...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGACCCGGGCATGGCTGGTaGCTCTGCAGAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGPGHGW*LCRGSV
Trigger: CACTGAGCCTCTGCAGAGCCACCAGCCATGCCCGGG...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGCCGGCGCGACCAGCTaGTGGCTTGACCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCAGATS*WLDPPL
Trigger: TAGAGGAGGGTCAAGCCACCAGCTGGTCGCGCCGGC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGCCGGCGCGACCAGCTaGTGGCTTGACCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPAGATS*WLDPPL
Trigger: TAGAGGAGGGTCAAGCCACCAGCTGGTCGCGCCGGC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTCCGCATCAGGTACATaGGCCACCCGTAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTSASGT*ATRRQP
Trigger: TGGCTGCCTACGGGTGGCCCATGTACCTGATGCGGA...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGAGGGTCGGATACTGTaGGCGCAGAAGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAEGRIL*AQKEGE
Trigger: CTCTCCTTCCTTCTGCGCCCACAGTATCCGACCCTC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCCAGGCAGCTCCGACTTaGGGATGCATTTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGQAAPT*GCIWWP
Trigger: GGGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTG...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCGGCCCCGTGGGGAGTaGCTGCTGCTGGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCRPRGE*LLLEDE
Trigger: CTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGGGCGAGAGTGAGATGCCCGAGGAGGGGTCGGCTGAGCCGGCAAAGAGCCGTAGGCTCATCTCAGACTaGGACTTGCTCCTGACGCTG +
Preference number: 4 (lower is better)
Translates to: EGESEMPEEGSAEPAKSRRLISD*DLLLTL
Trigger: CAGCGTCAGGAGCAAGTCCCAGTCTGAGATGAGCCT...ACGGCTCTTTGCCGGCTCAGCCGACCCCTCCTCGGGCATCTCACTCTCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGAGGCTCTCCATGGTaGCCAGTGGTGCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGRGSPW*PVVPAG
Trigger: CCCGGCGGGCACCACTGGCCACCATGGAGAGCCTCT...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGCTGGCTGGGGGACTTaGGGCCCTCAGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCAGWGT*GPQRSH
Trigger: GTGACTACGCTGAGGGCCCCAAGTCCCCCAGCCAGC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGCTTGGGCACCAGGTTaGGCTCGAACTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWAWAPG*ARTGHG
Trigger: TCCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGCCGGCAAAGAGCCGTaGGGGCTTGGGCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCAGKEP*GLGHQV
Trigger: AACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCGCGGGGCTGGCTCCGTaGCCAGTGGGGGTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGAGLAP*PVGVEV
Trigger: GACTTCTACCCCCACTGGCCACGGAGCCAGCCCCGC...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGCCAGAATGCCCCCATaGAGGGCAGTCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGARMPP*RAVRLS
Trigger: ACTCAGCCTGACTGCCCTCCATGGGGGCATTCTGGC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGAGGCAGCTTGCCCATaGCCTGTCCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCEAACP*PVLEQG
Trigger: CCCCTGCTCCAGGACAGGCCATGGGCAAGCTGCCTC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGCTCCCACCCCGCTTCTaGGGAAACTCCGGGTCGCTA +
Preference number: 4 (lower is better)
Translates to: RRESKLYRDSVSERLSMVLPPRF*GNSGSL
Trigger: TAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAG...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTAGAGAGGGAGGTCTCTTaGTCGGGGGAGCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLEREVS*SGEPRP
Trigger: TGGCCTAGGCTCCCCCGACCAAGAGACCTCCCTCTC...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACTGCAGGTCTGGGGATaGAGTGGGGGTCGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLLQVWG*SGGRSE
Trigger: CTCAGACCGACCCCCACTCCATCCCCAGACCTGCAG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGTGCATGAGGGTCTGTaGGGCCCGGCTGCTCGCTAC +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCVHEGL*GPAARY
Trigger: GTAGCGAGCAGCCGGGCCCCACAGACCCTCATGCAC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGCATGCTCAGCCAGATaGTGGCCATCTCAGCGATCA +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAACSAR*WPSQRS
Trigger: TGATCGCTGAGATGGCCATCATCTGGCTGAGCATGC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGGGTCCCCCGGATACTaGTCACCACTTTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HCLPRPARRCAWPAAAAGGSPGY*SPLSSC
Trigger: ACAAGAAGAAAGTGGTGATCAGTATCCGGGGGACCC...TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCGGGCTGCGTGTCCTGTaGGTGCTTGGACAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPGLRVL*VLGQAV
Trigger: GACAGCCTGTCCAAGCACTCACAGGACACGCAGCCC...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGCTAGCGTGCTGAGATaGCCAGCTCATCTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRASVLR*PAHLAW
Trigger: CCAAGCAAGATGAGCTGGTCATCTCAGCACGCTAGC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGGCCTGGACCACAGATaGGAATACATGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGGLDHR*EYMCRG
Trigger: CCCCCGACACATGTATTCTCATCTGTGGTCCAGGCC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCATGCCGCTGCAGAATaGAGGCACGAGCAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVHAAAE*RHEQAV
Trigger: GACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATG...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACCGGCTGCTCGCTACTaGTTGCATATGGAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLPAARY*LHMESP
Trigger: GGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCGTCCGCAGGTTACGCTaGCTCCTCTTGGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASVRRLR*LLLVAL
Trigger: GAGAGCCACCAAGAGGAGGCAGCGTAACCTGCGGAC...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGTGGGGACGAGGTCTTTaGCCAGAACCACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELWGRGL*PEPQQS
Trigger: TGACTGCTGTGGTTCTGGGCAAAGACCTCGTCCCCA...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGCCATTTGGGCTTGGTaGTTCGCTGCAGGACATCCA +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAAIWAW*FAAGHP
Trigger: TGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTAGCTCCGACTTGGGGATaGATTTGGTGGCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLAPTWG*IWWPPR
Trigger: TCGTGGGGGCCACCAAATGCATCCCCAAGTCGGAGC...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACCCGTGGGGAGTGGCTaGTGCTGGAAGATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLPVGSG*CWKMSS
Trigger: TGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGCAGCAGCGATGCCTGTaGCTGAGGCTAAACTGCCCC +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWQQRCL*LRLNCP
Trigger: GGGGCAGTTTAGCCTCAGGCACAGGCATCGCTGCTG...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGCCAGCTCAGCAGCGATaGCTGTGCCTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPPAQQR*LCLRLN
Trigger: GTTTAGCCTCAGGCACAGGCATCGCTGCTGAGCTGG...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCTCCTGGAGCAGGGGGTaGCAGAATGCCCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVSWSRG*QNAPME
Trigger: CTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGA...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCGGGTGGTCACAGCAGTaGCCACCACCCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVGWSQQ*PPPFGW
Trigger: CCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCC...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACCCCGCGCACTTGTGCTaGAGGTCTGGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYPAHLC*RSGDGV
Trigger: CACTCCATCCCCAGACCTGCAGCACAAGTGCGCGGG...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTTCTGCAGAGGCTCAGTaGGCCTGGTGCTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAASAEAQ*AWCSPP
Trigger: AGGAGGTGAGCACCAGGCCCACTGAGCCTCTGCAGA...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTAGAGCACGTACTGCATaGAGTCACGGGGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTRARTA*SHGAPC
Trigger: ACACGGAGCCCCGTGACTCCATGCAGTACGTGCTCT...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257215.10
CDS-3UTR CCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGACAAAGGTGCGGCCCGTaGGGTCGAAGACGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGQRCGP*GRRRRG
Trigger: TCCTCTGCGTCTTCGACCCCACGGGCCGCACCTTTG...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGGGCGCGACCAGCTGGTaGCTTGACCCTCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: QARWEQMVPKAELVPATLGATSW*LDPPLS
Trigger: GCTTAGAGGAGGGTCAAGCCACCAGCTGGTCGCGCC...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGAAGGAAGGAGAGGATaGCAGCAGTGCCCGCGCCCA +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYEGRRG*QQCPRP
Trigger: TGGGCGCGGGCACTGCTGCCATCCTCTCCTTCCTTC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGAGAGAGGCCAATCCTaGGGACGAGGTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGERGQS*GRGLCP
Trigger: TGGGCAAAGACCTCGTCCCCAGGATTGGCCTCTCTC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCTCCAGAGCCGCGTGCTaGCCAGGGTGGTCACCTCTA +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVSRAAC*PGWSPL
Trigger: TAGAGGTGACCACCCTGGCCAGCACGCGGCTCTGGA...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCACGCTGCTGTTGCGGTaGTCTGCAGTCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPTLLLR*SAVGSS
Trigger: GGAGCTGCCGACTGCAGACCACCGCAACAGCAGCGT...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCAGCGTAGTCACTGGTaGGGCTCTCGGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPQRSHW*GSRAPP
Trigger: TGGTGGTGCCCGAGAGCCCCACCAGTGACTACGCTG...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGGATCTCTTGCTGGCTaGGGGACTTGGGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCGSLAG*GTWGPQ
Trigger: CTGAGGGCCCCAAGTCCCCCAGCCAGCAAGAGATCC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGAGAGCCGTGGGGGCTTaGGCACCAGGTTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQRAVGA*APGWAR
Trigger: TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCT...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCACTCTGCAGCTGGGGTaGTCACAGCAGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TPSHPASGETPGRYLPNCTLQLG*SQQCPP
Trigger: TGGTGGGCACTGCTGTGACCACCCCAGCTGCAGAGT...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCTCCCACCCCGCTTCTaGGGAAACTCCGGGTCGCTA +
Preference number: 4 (lower is better)
Translates to: QARWEQMVPKAELVPATLLPPRF*GNSGSL
Trigger: TAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAG...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCGAGAGGGAGGTCTCTTaGTCGGGGGAGCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVEREVS*SGEPRP
Trigger: TGGCCTAGGCTCCCCCGACCAAGAGACCTCCCTCTC...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGTCTTGCTTCTGTGCTaGGCTGAAGCTCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: HCLPRPARRCAWPAAAAGVLLLC*AEALYA
Trigger: GGCATACAGAGCTTCAGCCCAGCACAGAAGCAAGAC...TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCTGCAGGTCTGGGGATaGAGTGGGGGTCGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QARWEQMVPKAELVPATLLQVWG*SGGRSE
Trigger: CTCAGACCGACCCCCACTCCATCCCCAGACCTGCAG...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CGAGGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTTGGAATACTCCATCGAGTCGCCCAGGCCCCTaGGAGGACAGGCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: RGLCPEPQQSRTPWNTPSSRPGP*EDRPAH
Trigger: GTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACT...CGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp AGGGTGGTCACCTCTACCTCCTCAGGCAGCTCCGACTaGGGGATGCATTTGGTGGCCCCCACGATGATCCGC +
Preference number: 4 (lower is better)
Translates to: RVVTSTSSGSSD*GMHLVAPTMIR
Trigger: GCGGATCATCGTGGGGGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTGAGGAGGTAGAGGTGACCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCTGGTGGCTCTCAGCTTaGCAAAGGTGCGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGWWLSA*QRCGPW
Trigger: CCACGGGCCGCACCTTTGTCAAGCTGAGAGCCACCA...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGGCGGAGCATCTCTTGTaGATTCTTGAGGTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRAEHLL*ILEVEV
Trigger: TACCTCGACCTCAAGAATTCACAAGAGATGCTCCGC...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCTGTCTTCCTCGATGGTaGCTCCAGGGGCGAACCGCG +
Preference number: 4 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGCLPRW*LQGRTA
Trigger: CGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACA...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp ATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGAAGCCTTGAAGGAGGGCGAGAGTaGGATGCCCGAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: IWAWCFAAGHPGAVCGSLEGGRE*DARGGV
Trigger: GACCCCTCCTCGGGCATCTCACTCTCGCCCTCCTTC...AAGGCTTCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTTTCCACCCAGGGCACTaGCTCTGCAGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFFHPGH*LCSWGG
Trigger: ACCACCCCAGCTGCAGAGTCAGTGCCCTGGGTGGAA...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGTCAAGTCTCTCCCTGTaGCTGGCCACGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: RRESKLYRDSVSERLSMVSSLSL*LATVLV
Trigger: GACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGA...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCATCCAGGAGCTGTCTaGGGAAGCCTTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAHPGAV*GSLPAE
Trigger: CTCAGCTGGAAGGCTTCCGCAGACAGCTCCTGGATG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTGGCTTGGTGCTTCGCTaGAGGACATCCAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAGLVLR*RTSRSC
Trigger: ACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCC...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGCAGCAGCACTGCTCTaGAGGGTGGTTGTGGACCAC +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYAAALL*RVVVDH
Trigger: GTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTGC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCAAACATGTACAGCACTaGAGGCCACCTCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASKHVQH*RPPRQG
Trigger: CCCCTGCCGAGGTGGCCTGCAGTGCTGTACATGTTT...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTTGGAGGAGGGAGACGTaGAGCAGGCCCATCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAWRRET*SRPILQ
Trigger: TTGAAGGATGGGCCTGCTGCACGTCTCCCTCCTCCA...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTAGGCCCGCGCACTTGTaGTGCAGGTCTGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFRPAHL*CRSGDG
Trigger: TCCATCCCCAGACCTGCAGCACAAGTGCGCGGGCCT...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCCTGCTCGCTACTGATTaGATATGGAGTCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RVCGARLLATDCIWSRPGLLATD*IWSRPG
Trigger: GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAG...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTGGCACGTAAGAGAGTaGATGAGGGTCTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TPSHPASGETPGRYLPNCWHVRE*MRVCGA
Trigger: GGCCCCACAGACCCTCATGCACTCTCTTACGTGCCA...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCCGCCATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGATCTGCAGAGGCTCAGTaGGCCTGGTGCTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SAIWAWCFAAGHPGAVCGSAEAQ*AWCSPP
Trigger: AGGAGGTGAGCACCAGGCCCACTGAGCCTCTGCAGA...TCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGGATCCCGGGCATGGCTaGTGGCTCTGCAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQDPGHG*WLCRGS
Trigger: TGAGCCTCTGCAGAGCCACCAGCCATGCCCGGGATC...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGGAAGTGGCGCCGGATaGCAATGGCATTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWGSGAG*QWHYSH
Trigger: GTGGCTGTAATGCCATTGCCATCCGGCGCCACTTCC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGTCAGGCCGTAGTGTTTaGTTCCGCGGCCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QARWEQMVPKAELVPATLSGRSV*FRGPGL
Trigger: GAGACCTGGGCCGCGGAACCAAACACTACGGCCTGA...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CGTGCAGCAGAGGAACACTTTGAGCCGGCGCGACCAGCTGGTGGCTTGACCCTCTCCGCCATTTGGGCTTaGTGCTTCGCTGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: RAAEEHFEPARPAGGLTLSAIWA*CFAAGH
Trigger: ATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA...GAGGGTCAAGCCACCAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCACTGCTCTGCAGGGTaGTTGTGGACCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASHCSAG*LWTTWM
Trigger: CATCCACGTGGTCCACAACCACCCTGCAGAGCAGTG...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGAGATGGCAAAGTATGTaGGCTCCTCCTGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPARWQSM*APPAHS
Trigger: GCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCT...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCGCATGGGCGGCCCCGTaGGGAGTGGCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIAWAAP*GVAAAG
Trigger: TCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGC...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGCCGCCAGCCGCTCCTaGGTAGACAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAAASRS*VDSSSS
Trigger: GCTGCTGCTGCTGTCTACCCAGGAGCGGCTGGCGGC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCGCACAGCGTGGAGGCTaGGGGAGCCCCGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIAQRGG*GSPGCC
Trigger: GCAGCATCCGGGGCTCCCCCAGCCTCCACGCTGTGC...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTGGTTTTCCTCGGGGATaGCAGGGTCAATGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGGFPRG*QGQCRR
Trigger: TCTTCTACATTGACCCTGCCATCCCCGAGGAAAACC...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GTTTCTGGTCACCGGCATCCCAGACAGGAAGGCCAAGATGTCATTGTTTGCCTCCCAGCACCTGAGGACTaGGCGAGTCCCCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: VSGHRHPRQEGQDVIVCLPAPED*ASPPGA
Trigger: GGCGCCTGGGGGACTCGCCCAGTCCTCAGGTGCTGG...GAGGCAAACAATGACATCTTGGCCTTCCTGTCTGGGATGCCGGTGACCAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGCCGCCAGGCATTCCTaGCTACTGAGGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMAARHS*LLRPVG
Trigger: GCCCACGGGCCTCAGTAGCCAGGAATGCCTGGCGGC...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGGGCTGGCCACGCAACTaGGGTGCTAGCGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQGWPRN*GASVLR
Trigger: TCTCAGCACGCTAGCACCCCAGTTGCGTGGCCAGCC...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGACCATACCCCACTCTTaGCCCCACCTCCTACCAACA +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPTIPHS*PHLLPT
Trigger: TGTTGGTAGGAGGTGGGGCCAAGAGTGGGGTATGGT...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGGGGAGGAAGCCCTATaGGGACCTCAGGCTAAACCG +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCGEEAL*GPQAKP
Trigger: CGGTTTAGCCTGAGGTCCCCATAGGGCTTCCTCCCC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGTCTTGCTTCTGTGCTaGGCTGAAGCTCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAVLLLC*AEALYA
Trigger: GGCATACAGAGCTTCAGCCCAGCACAGAAGCAAGAC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCCCAAGCCTGAAACATaGTGTGGCTGCAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASPKPET*CGCSLG
Trigger: CCCAAGGCTGCAGCCACACCATGTTTCAGGCTTGGG...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGAAAAGTCTGGGGAGAATaGCACGTAAGAGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARKVWGE*HVRECM
Trigger: CATGCACTCTCTTACGTGCCATTCTCCCCAGACTTT...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp TGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTaGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGC +
Preference number: 4 (lower is better)
Translates to: WRRMAMALQPQQ*SSSMVTPGANR
Trigger: GCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp GGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTaGGCTGCAGAGAGCAGAGCGGTCTTCCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GVRSTSVGLTMT*AAESRAVFPLL
Trigger: CAACAAGGGGAAGACCGCTCTGCTCTCTGCAGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGGCATGCTCAGCCAGATaGTGGCCATCTCAGCGATCA +
Preference number: 4 (lower is better)
Translates to: RRESKLYRDSVSERLSMVACSAR*WPSQRS
Trigger: TGATCGCTGAGATGGCCATCATCTGGCTGAGCATGC...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACCACGATGGCGTAGATaGACTCGATCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLPRWRR*TRSPGW
Trigger: CCATCCTGGTGATCGAGTTCATCTACGCCATCGTGG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTGGGTCCCCCGGATACTaGTCACCACTTTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTGSPGY*SPLSSC
Trigger: ACAAGAAGAAAGTGGTGATCAGTATCCGGGGGACCC...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCTTGATGTACTCAGCTaGGAGGACCATACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPALDVLS*EDHTLV
Trigger: CACAAGGGTATGGTCCTCTCAGCTGAGTACATCAAG...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGCTGCTGCTGGAAGATaGGCTCAGGAGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCAAAGR*AQESGP
Trigger: TGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGCGAATTCCAGCACCTaGGGACTGGGCGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAANSST*GLGESP
Trigger: GGGGGACTCGCCCAGTCCTCAGGTGCTGGAATTCGC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGCTAGCGTGCTGAGATaGCCAGCTCATCTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWASVLR*PAHLAW
Trigger: CCAAGCAAGATGAGCTGGTCATCTCAGCACGCTAGC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGTCAGAGGACGGCTACTaGACACATGATTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GKLRVAISLTASQTQQGRSEDGY*THDWAG
Trigger: CCCCGCCCAATCATGTGTTCAGTAGCCGTCCTCTGA...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGACCACCCTTTGGGTGGTaGGGATCCTTGGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGPPFGW*GSLGVE
Trigger: TTCTACCCCCAAGGATCCTCACCACCCAAAGGGTGG...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACTCAAGTCTCTCCCTGTaGCTGGCCACGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYSSLSL*LATVLV
Trigger: GACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGA...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCATCCAGGAGCTGTCTaGGGAAGCCTTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCHPGAV*GSLPAE
Trigger: CTCAGCTGGAAGGCTTCCGCAGACAGCTCCTGGATG...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCGGCTTGGTGCTTCGCTaGAGGACATCCAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVGLVLR*RTSRSC
Trigger: ACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCC...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGGCCATTTGGGCTTGGTaGTTCGCTGCAGGACATCCA +
Preference number: 4 (lower is better)
Translates to: RRESKLYRDSVSERLSMVAIWAW*FAAGHP
Trigger: TGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGC...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTGGGGGAGCCCCGGATaGTGCGGAAGCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIWGSPG*CGSLRS
Trigger: GCTCCTCAGGCTTCCGCAGCATCCGGGGCTCCCCCA...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCTCTCGGGCACCACCATaGAGTAGAGGTCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASSRAPP*SRGLGR
Trigger: CCTTCCAAGACCTCTACTGCATGGTGGTGCCCGAGA...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGATTGTCCCTGCGACCCTaGCTCAAAGGCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGLSLRP*LKGPIM
Trigger: CATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAA...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TCCTGGCTACTGAGGCCCGTGGGCGTCAGGTCCATGAGCTCACCCGAGGAGCTGGATGGGAACAGATGGTaGCTAAAGCTGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SWLLRPVGVRSMSSPEELDGNRW*LKLSLS
Trigger: GGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATC...CAGCTCCTCGGGTGAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGCAGGCGGTCAGCCGTaGAGTCAGCGCCTCGGTACA +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAAGGQP*SQRLGT
Trigger: TGTACCGAGGCGCTGACTGCACGGCTGACCGCCTGC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGGAGGGACCATGCCGCTaGAGAATGAAGGCACGAGCA +
Preference number: 4 (lower is better)
Translates to: QARWEQMVPKAELVPATLEGPCR*RMKARA
Trigger: TGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTC...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGAGGGACCATGCCGCTaGAGAATGAAGGCACGAGCA +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYEGPCR*RMKARA
Trigger: TGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGTGTGACTGGCCACGGTaGTTGTCAGATCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRCDWPR*LSDLSS
Trigger: AGATGAAAGATCTGACAAGCACCGTGGCCAGTCACA...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGATGGCACGTAAGAGAGTaGATGAGGGTCTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGWHVRE*MRVCGA
Trigger: GGCCCCACAGACCCTCATGCACTCTCTTACGTGCCA...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCGGCGCCGGATGGCAATaGCATTACAGCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVGAGWQ*HYSHSS
Trigger: ACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCC...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGGAAGTGGCGCCGGATaGCAATGGCATTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPGSGAG*QWHYSH
Trigger: GTGGCTGTAATGCCATTGCCATCCGGCGCCACTTCC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTCAGTCAGGGCATCCTTaGGGGACAGGGTCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAQSGHP*GTGSPG
Trigger: TCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTG...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGAGGGTCGGATACTGTaGGCGCAGAAGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPEGRIL*AQKEGE
Trigger: CTCTCCTTCCTTCTGCGCCCACAGTATCCGACCCTC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCAGTCACGAACTCCTTaGAATACTCCATCGCATCCT +
Preference number: 4 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGQSRTP*NTPSHP
Trigger: AGGATGCGATGGAGTATTCCAAGGAGTTCGTGACTG...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCGAGAGAGGCCAATCCTaGGGACGAGGTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPERGQS*GRGLCP
Trigger: TGGGCAAAGACCTCGTCCCCAGGATTGGCCTCTCTC...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGCAGACACTGCTCTGCAGGGTaGTTGTGGACCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: ELRSQVHLGRAHHDLGCRHCSAG*LWTTWM
Trigger: CATCCACGTGGTCCACAACCACCCTGCAGAGCAGTG...TCTGCAGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCTCATGCAGCATGGCTaGCGAGATGATCACCTCATT +
Preference number: 4 (lower is better)
Translates to: LATDCIWSRPGPWEDRPALMQHG*RDDHLI
Trigger: AATGAGGTGATCATCTCGCCAGCCATGCTGCATGAG...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGGGAGTGGCTGCTGCTaGAAGATGAGCTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCGSGCC*KMSSGV
Trigger: GACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGAGGTTGGGCTCGAACTaGGCACGGAGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: GKLRVAISLTASQTQQGRRLGSN*ARSRIS
Trigger: AGAGATCCTGCTCCGTGCCCAGTTCGAGCCCAACCT...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGGCTGGCCACGCAACTaGGGTGCTAGCGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLAGWPRN*GASVLR
Trigger: TCTCAGCACGCTAGCACCCCAGTTGCGTGGCCAGCC...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGTCTCTCCCTGTGACTaGCCACGGTGCTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWVSPCD*PRCLSD
Trigger: ATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGAC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGCCTTCAAGGGCGAGGTaGGTAGGAGCCAGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQPSRAR*VGARLG
Trigger: CCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGG...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CAA 72 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTaGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLS*SLRPCLKGPIM
Trigger: CATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
3UTR CAA 72 bp TCTACCTCCTCAGGCAGCTCCGACTTGGGGATGCATTaGGTGGCCCCCACGATGATCCGCCATTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: STSSGSSDLGMH*VAPTMIRHLGL
Trigger: CAAGCCCAAATGGCGGATCATCGTGGGGGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTGAGGAGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp GGTGGGGCTCTCGGGCACCACCATGCAGTAGAGGTCTaGGAAGGAGCTGCTCTTGCTGTCCAGGTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GGALGHHHAVEV*EGAALAVQVEE
Trigger: CTCTTCAACCTGGACAGCAAGAGCAGCTCCTTCCAAGACCTCTACTGCATGGTGGTGCCCGAGAGCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCAGGTGTAGTACTGAGTaGGCCAGACGATGCCCACGA +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCRCSTE*ARRCPR
Trigger: TCGTGGGCATCGTCTGGCTCACTCAGTACTACACCT...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCGCACCAGGCCAGCAATaGTGTCGGATGGCACAATGT +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCAPGQQ*CRMAQC
Trigger: ACATTGTGCCATCCGACATCATTGCTGGCCTGGTGC...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCATGTCTTCCTCGATGGTaGCTCCAGGGGCGAACCGCG +
Preference number: 4 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPCLPRW*LQGRTA
Trigger: CGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACA...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCAGTAGGCAAAGCACTTaGGGGTCGGATACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPSRQST*GSDTVG
Trigger: GCCCACAGTATCCGACCCTCAAGTGCTTTGCCTACT...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGCGGAAGCCTTCCAGCTaGGAGAGGCCAATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMRKPSS*ERPILG
Trigger: CCCCAGGATTGGCCTCTCTCAGCTGGAAGGCTTCCG...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCCCATCTCAGCGATCATaGAGCTCAGCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPPSQRS*SSAGCP
Trigger: TGGGCATCCTGCTGAGCTGCATGATCGCTGAGATGG...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCTGGGGACGAGGTCTTTaGCCAGAACCACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPWGRGL*PEPQQS
Trigger: TGACTGCTGTGGTTCTGGGCAAAGACCTCGTCCCCA...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGTAGTAGCAGACCTCTTTGTAGCAGCAGCACTGCTCTaGAGGGTGGTTGTGGACCAC +
Preference number: 4 (lower is better)
Translates to: GPPVGSQGKEHVVADLFVAAALL*RVVVDH
Trigger: GTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTGC...TACAAAGAGGTCTGCTACTACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp ATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGGAGCAGGATCTCTTaGTGGCTGGGGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: MALQPQQLSSSMVTPGANRSRIS*WLGDLG
Trigger: CCCCAAGTCCCCCAGCCAGCAAGAGATCCTGCTCCG...GTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCATCCTGGAGCAGGGGGTaGCAGAATGCCCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPSWSRG*QNAPME
Trigger: CTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGA...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GCAGGACCGAGCCAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATCCACTGATTTTGTCTTaGTTCTGTGCTGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AGPSQLAEAAGGLPHQVHPLILS*FCAGLK
Trigger: CTTCAGCCCAGCACAGAAGCAAGACAAAATCAGTGG...ATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTGCTCGCTACTGATTaGATATGGAGTCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPLLATD*IWSRPG
Trigger: GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAG...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCTCTGTGGGGCCCGGCTaGTCGCTACTGATTGCATAT +
Preference number: 4 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCSVGPG*SLLIAY
Trigger: ATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGA...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACTCTGTGGGGCCCGGCTaGTCGCTACTGATTGCATAT +
Preference number: 4 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYSVGPG*SLLIAY
Trigger: ATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGA...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTGGCGCCGGATGGCAATaGCATTACAGCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFGAGWQ*HYSHSS
Trigger: ACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCC...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCTCCGCCATTTGGGCTTaGTGCTTCGCTGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPSAIWA*CFAAGH
Trigger: ATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTTGTTGTCGCCCCAGATaGCAAAGTATGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGRMARKRVHEGLWGPAACCRPR*QSMWAP
Trigger: AGGAGCCCACATACTTTGCCATCTGGGGCGACAACA...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGCTCATGCAGCATGGCTaGCGAGATGATCACCTCATT +
Preference number: 4 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPLMQHG*RDDHLI
Trigger: AATGAGGTGATCATCTCGCCAGCCATGCTGCATGAG...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTACAAGGCCAGTGGGCATaGGCGGCCCCGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVQGQWA*AAPWGV
Trigger: CACTCCCCACGGGGCCGCCCATGCCCACTGGCCTTG...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGCTCATCTCAGACTaGGACTTGCTCCTGACGCTG +
Preference number: 4 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPRLISD*DLLLTL
Trigger: CAGCGTCAGGAGCAAGTCCCAGTCTGAGATGAGCCT...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGCGCGAGCTCAGGGATaGGTTTTCCTCGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAARAQG*VFLGDG
Trigger: GCCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTAGCAGGATCTCTTGCTaGCTGGGGGACTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKASRISC*LGDLGP
Trigger: GGGCCCCAAGTCCCCCAGCCAGCAAGAGATCCTGCT...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGCGCGATGGGAACAGATaGTGCCTAAAGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWRDGNR*CLKLSL
Trigger: CAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCG...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCCCAGTCCCAGCTGTGTaGGGAGCCGGGGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIPVPAV*GAGGQN
Trigger: ATTCTGGCCCCCGGCTCCCCACACAGCTGGGACTGG...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGAGTCTCTCCCTGTGACTaGCCACGGTGCTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGVSPCD*PRCLSD
Trigger: ATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGAC...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCACCTGATGGCTCGTCCTaGGGTGGACGACATGCCCAC +
Preference number: 4 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPPDGSS*GGRHAH
Trigger: GTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGG...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCGACCAGCTGGTGGCTTaGCCCTCCTCTAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIDQLVA*PSSKRC
Trigger: GCACCGCTTAGAGGAGGGTCAAGCCACCAGCTGGTC...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGTCTCTTGTGAATTCTTaGGGTCGAGGTACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SLPMACPGAGGARMPPWRSLVNS*GRGTWC
Trigger: ACACCAAGTACCTCGACCTCAAGAATTCACAAGAGA...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGGCTCCGTGTAGAGGATaGCCCCGCGCATGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLAPCRG*PRACSA
Trigger: GGCTGAGCATGCGCGGGGGCATCCTCTACACGGAGC...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGTCTCGGGCACCACCATaGAGTAGAGGTCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQSRAPP*SRGLGR
Trigger: CCTTCCAAGACCTCTACTGCATGGTGGTGCCCGAGA...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp CCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCGATGGGAACAGATGGTaGCTAAAGCTGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PPTPLLGKLRVAISLTASDGNRW*LKLSLS
Trigger: GGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATC...GGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGAGGTACTTGGTGTTTCTaGTCACCGGCATCCCAGACA +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGGTWCF*SPASQT
Trigger: TGTCTGGGATGCCGGTGACCAGAAACACCAAGTACC...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCGGTACTTGGTGTTTCTaGTCACCGGCATCCCAGACA +
Preference number: 4 (lower is better)
Translates to: PKAELVPATLPQRPHHAPGTWCF*SPASQT
Trigger: TGTCTGGGATGCCGGTGACCAGAAACACCAAGTACC...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGTCCGCATCAGGTACATaGGCCACCCGTAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMSASGT*ATRRQP
Trigger: TGGCTGCCTACGGGTGGCCCATGTACCTGATGCGGA...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCATCAGGCCGTAGTGTTTaGTTCCGCGGCCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPSGRSV*FRGPGL
Trigger: GAGACCTGGGCCGCGGAACCAAACACTACGGCCTGA...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GTTTCTGGTCACCGGCATCCCAGACAGGAAGGCCAAGATGTCATTGTTTGCCTCGCGTGCTGGCCAGGGTaGTCACCTCTACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSGHRHPRQEGQDVIVCLACWPG*SPLPPQ
Trigger: CTGAGGAGGTAGAGGTGACCACCCTGGCCAGCACGC...GAGGCAAACAATGACATCTTGGCCTTCCTGTCTGGGATGCCGGTGACCAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGTGGTTGTGGACCACGTaGATGATGCGGCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLWLWTT*MMRPGG
Trigger: CCCGCCCGGCCGCATCATCCACGTGGTCCACAACCA...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGAGAGCCGTGGGGGCTTaGGCACCAGGTTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLRAVGA*APGWAR
Trigger: TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCT...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGGCCGGCAAAGAGCCGTaGGGGCTTGGGCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLAGKEP*GLGHQV
Trigger: AACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGC...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGAGGACGATGCCGGCCTaGACCACAGATGAGAATACA +
Preference number: 4 (lower is better)
Translates to: QARWEQMVPKAELVPATLRTMPA*TTDENT
Trigger: TGTATTCTCATCTGTGGTCCAGGCCGGCATCGTCCT...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGCTCCCTCTGTCAGGGTaGGCAGGGGCTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLLPLSG*AGAPRT
Trigger: TGTCCTGGGAGCCCCTGCCCACCCTGACAGAGGGAG...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGCCTTCAAGGGCGAGGTaGGTAGGAGCCAGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMPSRAR*VGARLG
Trigger: CCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGG...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGCACCAGGATGGTGCATaGAGTCACGGGGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMHQDGA*SHGAPC
Trigger: ACACGGAGCCCCGTGACTCCATGCACCATCCTGGTG...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCAGGCCTGGACCACAGATaGGAATACATGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPGLDHR*EYMCRG
Trigger: CCCCCGACACATGTATTCTCATCTGTGGTCCAGGCC...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGCCCCAGCCCCAAGCCTaGAACATGGTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLPQPQA*NMVWLQ
Trigger: CTGCAGCCACACCATGTTTCAGGCTTGGGGCTGGGG...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTAGCTGTTGCGGTGGTCTaGAGTCGGCAGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVAVAVV*SRQLQG
Trigger: GCCCTGGAGCTGCCGACTGCAGACCACCGCAACAGC...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGAATGGGAGGGACCATaGCGCTGCAGAATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLAEWEGP*RCRMKA
Trigger: TGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTATGGGCTGCCCCTGGGTaGCCAGGATTGAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVWAAPG*PGLSPS
Trigger: GCTTGGGCTCAATCCTGGGCACCCAGGGGCAGCCCA...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTCTCGCCCAAAGGCCTaGGACAGGACCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQISRPKA*DRTISC
Trigger: GCAGGAGATGGTCCTGTCCCAGGCCTTTGGGCGAGA...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGGGAGTGGCTGCTGCTaGAAGATGAGCTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMGSGCC*KMSSGV
Trigger: GACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCC...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGACGCTGCTGTTGCGGTaGTCTGCAGTCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLTLLLR*SAVGSS
Trigger: GGAGCTGCCGACTGCAGACCACCGCAACAGCAGCGT...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCACTCTGCAGCTGGGGTaGTCACAGCAGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQITLQLG*SQQCPP
Trigger: TGGTGGGCACTGCTGTGACCACCCCAGCTGCAGAGT...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTCGCGATGGGAACAGATaGTGCCTAAAGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFRDGNR*CLKLSL
Trigger: CAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCG...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGCAGGTGGAGCCAGAATaGGAGGGACCATGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLQVEPE*EGPCRC
Trigger: GCAGCGGCATGGTCCCTCCCATTCTGGCTCCACCTG...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGCTACTGATTGCATATaGAGTCGCCCAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAATDCI*SRPGPW
Trigger: CCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGC...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCAAAGTCTGGGGAGAATaGCACGTAAGAGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: TPSHPASGETPGRYLPNCKVWGE*HVRECM
Trigger: CATGCACTCTCTTACGTGCCATTCTCCCCAGACTTT...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTAGTAGGCAAAGCACTTaGGGGTCGGATACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKASRQST*GSDTVG
Trigger: GCCCACAGTATCCGACCCTCAAGTGCTTTGCCTACT...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGGCGAGGAGGGAAAGCTaGGGGGAACAGGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLARRES*GEQGCV
Trigger: AACACACCCCTGTTCCCCTCAGCTTTCCCTCCTCGC...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTACCCCAGCCCCAAGCCTaGAACATGGTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVPQPQA*NMVWLQ
Trigger: CTGCAGCCACACCATGTTTCAGGCTTGGGGCTGGGG...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGTGCGTGTCCTGTGAGTaGTTGGACAGGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLCVSCE*LDRLSA
Trigger: GGCCGACAGCCTGTCCAAGCACTCACAGGACACGCA...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTATTTGTCTTGCTTCTGTaGTGGGCTGAAGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLFVLLL*WAEALY
Trigger: ATACAGAGCTTCAGCCCAGCACAGAAGCAAGACAAA...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGATGTGACTGGCCACGGTaGTTGTCAGATCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGCDWPR*LSDLSS
Trigger: AGATGAAAGATCTGACAAGCACCGTGGCCAGTCACA...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGCAATGATGTCGGATaGCACAATGTCAAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGSNDVG*HNVKVP
Trigger: CGGGACCTTGACATTGTGCCATCCGACATCATTGCT...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGCAGACAGTCACGAACTCCTTaGAATACTCCATCGCATCCT +
Preference number: 4 (lower is better)
Translates to: ELRSQVHLGRAHHDLGCRQSRTP*NTPSHP
Trigger: AGGATGCGATGGAGTATTCCAAGGAGTTCGTGACTG...TCTGCAGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTAGATGGCAAAGTATGTaGGCTCCTCCTGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLARWQSM*APPAHS
Trigger: GCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCT...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp GGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGTAGTAGCAGACCTCTTTGTATGTTGTCGCCCCAGATaGCAAAGTATGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPPVGSQGKEHVVADLFVCCRPR*QSMWAP
Trigger: AGGAGCCCACATACTTTGCCATCTGGGGCGACAACA...TACAAAGAGGTCTGCTACTACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTAGCGCGAGCTCAGGGATaGGTTTTCCTCGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVARAQG*VFLGDG
Trigger: GCCATCCCCGAGGAAAACCCATCCCTGAGCTCGCGC...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCAGGTTGGGCTCGAACTaGGCACGGAGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIRLGSN*ARSRIS
Trigger: AGAGATCCTGCTCCGTGCCCAGTTCGAGCCCAACCT...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCACAGCAGCAGGCGCGATaGGAACAGATGGTGCCTAAA +
Preference number: 4 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPQQQAR*EQMVPK
Trigger: TTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTG...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CGAGGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTTGGAATACTCCATCGCCCAAGCCTGAAACATaGTGTGGCTGCAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGLCPEPQQSRTPWNTPSPKPET*CGCSLG
Trigger: CCCAAGGCTGCAGCCACACCATGTTTCAGGCTTGGG...CGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp AGGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTaGGAATACTCCATCGCATCCTCACTCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSLPRTTAVTNS*EYSIASSLSRP
Trigger: GGGCCTGCTGAGTGAGGATGCGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp ATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTaGTCGCCCCAGATGGCAAAGTATGTGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MAGEMITSLKAL*SPQMAKYVGSS
Trigger: GGAGGAGCCCACATACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp AGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTaGTTGTCGCCCCAGATGGCAAAGTATGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SMAGEMITSLKA*LSPQMAKYVGS
Trigger: GGAGCCCACATACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGTCTCTTGTGAATTCTTaGGGTCGAGGTACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GKLRVAISLTASQTQQGRSLVNS*GRGTWC
Trigger: ACACCAAGTACCTCGACCTCAAGAATTCACAAGAGA...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGTAGTAGCAGACCTCTTTGTAGCGGAGCATCTCTTGTaGATTCTTGAGGTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: GPPVGSQGKEHVVADLFVAEHLL*ILEVEV
Trigger: TACCTCGACCTCAAGAATTCACAAGAGATGCTCCGC...TACAAAGAGGTCTGCTACTACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGGGGGTGCTAGCGTGCTaGGATGACCAGCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLGVLAC*DDQLIL
Trigger: CAAGATGAGCTGGTCATCTCAGCACGCTAGCACCCC...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCCCACTGATTTTGTCTTaGTTCTGTGCTGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGPLILS*FCAGLK
Trigger: CTTCAGCCCAGCACAGAAGCAAGACAAAATCAGTGG...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CCA 90 bp GGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGTAGTAGCAGACCTCTTTGTAAGCAATGATGTCGGATaGCACAATGTCAAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GPPVGSQGKEHVVADLFVSNDVG*HNVKVP
Trigger: CGGGACCTTGACATTGTGCCATCCGACATCATTGCT...TACAAAGAGGTCTGCTACTACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTACAGGCAGCTCCGACTTaGGGATGCATTTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVQAAPT*GCIWWP
Trigger: GGGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTG...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CCA 90 bp CGAGGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTTGGAATACTCCATCGACCATACCCCACTCTTaGCCCCACCTCCTACCAACA +
Preference number: 4 (lower is better)
Translates to: RGLCPEPQQSRTPWNTPSTIPHS*PHLLPT
Trigger: TGTTGGTAGGAGGTGGGGCCAAGAGTGGGGTATGGT...CGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR TCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTCTTGATGTACTCAGCTaGGAGGACCATACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKALDVLS*EDHTLV
Trigger: CACAAGGGTATGGTCCTCTCAGCTGAGTACATCAAG...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTAGTCAGATCTTTCATCTaGGAGTCTGTCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLVRSFI*ESVLFS
Trigger: AGAAAACAAGACAGACTCTCAGATGAAAGATCTGAC...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR TCA 90 bp CGGCGCGAGTCGAAGCTGTACAGGGACTCAGTGTCCGAGAGGCTCTCCATGGTGGTCAGATCTTTCATCTaGGAGTCTGTCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRESKLYRDSVSERLSMVVRSFI*ESVLFS
Trigger: AGAAAACAAGACAGACTCTCAGATGAAAGATCTGAC...CACCATGGAGAGCCTCTCGGACACTGAGTCCCTGTACAGCTTCGACTCGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTATATGTGGGCTCCTCCTaGTCACAGCAGCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVYVGSS*SQQQHC
Trigger: GCAGTGCTGCTGCTGTGAGCAGGAGGAGCCCACATA...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp CGAGGTCTTTGCCCAGAACCACAGCAGTCACGAACTCCTTGGAATACTCCATCGAACGGTGCACACTCATaGACATGCATACGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: RGLCPEPQQSRTPWNTPSNGAHS*TCIRAN
Trigger: GTTGGCGCGTATGCATGTGCATGAGTGTGCACCGTT...CGATGGAGTATTCCAAGGAGTTCGTGACTGCTGTGGTTCTGGGCAAAGACCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp CGGAGCATCTCTTGTGAATTCTTGAGGTCGAGGTACTaGGTGTTTCTGGTCACCGGCATCCCAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSISCEFLRSRY*VFLVTGIPDRK
Trigger: CTTCCTGTCTGGGATGCCGGTGACCAGAAACACCAAGTACCTCGACCTCAAGAATTCACAAGAGATGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
3UTR CAA 72 bp TGCTCATGCAGCATGGCTGGCGAGATGATCACCTCATaGAAGGCCTTGTTGTCGCCCCAGATGGCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: CSCSMAGEMITS*KALLSPQMAKY
Trigger: ATACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR GCA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGAACGGTGCACACTCATaGACATGCATACGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLNGAHS*TCIRAN
Trigger: GTTGGCGCGTATGCATGTGCATGAGTGTGCACCGTT...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR GCA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTTTTGTCTTGCTTCTGTaGTGGGCTGAAGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAFVLLL*WAEALY
Trigger: ATACAGAGCTTCAGCCCAGCACAGAAGCAAGACAAA...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCTGGGGTCCCCCAGGCGCCCATaGTGCAGCGCCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: VAQAPGRTGPRTCAAGLGSPRRP*CSASSP
Trigger: CGGGGAGCTGGCGCTGCACAATGGGCGCCTGGGGGA...CCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGAGCAGGACCGAGCCAGTaGGCAGAGGCCGCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARAGPSQ*AEAAGG
Trigger: CCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGC...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GAATGGGAGGGACCATGCCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGAGCACGGCGTTGCGCTaGGCCCGCTGCCGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: EWEGPCRCRMKARAGGQPSTALR*ARCRCR
Trigger: CCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCT...CGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGGCATGGTCCCTCCCATTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGGGCTTGGGCACCAGGTaGGGCTCGAACTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRGLGTR*GSNWAR
Trigger: CCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGCC...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGCCTGGGTGCCCAGGATaGAGCCCAAGCCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRPGCPG*SPSLPQ
Trigger: CTGGGGCAGGCTTGGGCTCAATCCTGGGCACCCAGG...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCAGCACGGCGTTGCGCTaGGCCCGCTGCCGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: PKAELVPATLPQRPHHAPSTALR*ARCRCR
Trigger: CCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCT...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGTCGTCCAGCACGGCGTaGCGCTTGGCCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWSSSTA*RLARCR
Trigger: GCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCGCAGGACCGAGCCAGTaGGCAGAGGCCGCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: TPSHPASGETPGRYLPNCAGPSQ*AEAAGG
Trigger: CCCGCCTGCGGCCTCTGCCAACTGGCTCGGTCCTGC...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACTCAGTCAGGGCATCCTaGGGGGACAGGGTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHSVRAS*GDRVPR
Trigger: CCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGA...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGAGATGACCAGCTCATCTaGCTTGGCGGGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARDDQLI*LGGAGS
Trigger: GGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCATC...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTCAGCAGAGGAACACTTaGAGCCGGCGCGACCAGCTG +
Preference number: 5 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGQQRNT*SRRDQL
Trigger: CAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCTG...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGCAGCACCAGGTTGAGGTCGAGGTACTaGGTGTTTCTGGTCACCGGC +
Preference number: 5 (lower is better)
Translates to: SSSTALRLARCRCRSSTRLRSRY*VFLVTG
Trigger: GCCGGTGACCAGAAACACCAAGTACCTCGACCTCAA...CCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGTCGGCTGAGCCGGCAAAGAGCCGTGGGGGCTTGGGCACCAGGTTGGGCTCGATCAGGCAGCTCCGACTaGGGGATGCATTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GRLSRQRAVGAWAPGWARSGSSD*GMHLVA
Trigger: GGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTGA...TCGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTTTGCCGGCTCAGCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGACCAGCTCATCTTGCTaGGCGGGGCTGGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: LATDCIWSRPGPWEDRPATSSSC*AGLAPW
Trigger: CCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGT...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGGATGACCAGCTCATCTaGCTTGGCGGGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRDDQLI*LGGAGS
Trigger: GGAGCCAGCCCCGCCAAGCAAGATGAGCTGGTCATC...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGATGGCAGCAGTGCCCGCGCCCAGGGAGTGGCCCACCACAATCAGGCCGTAGTCAGATCCCAGCCACCTaGGCTCTGGGGGTCCTAAGC +
Preference number: 5 (lower is better)
Translates to: GWQQCPRPGSGPPQSGRSQIPAT*ALGVLS
Trigger: GCTTAGGACCCCCAGAGCCAAGGTGGCTGGGATCTG...ACTACGGCCTGATTGTGGTGGGCCACTCCCTGGGCGCGGGCACTGCTGCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGTGATGGGAGGCAGCTaGCCCATGGCCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPVMGGS*PMACPG
Trigger: TCCAGGACAGGCCATGGGCAAGCTGCCTCCCATCAC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGCAGCACCAGGAGGATGACTACCCAGTaGCAGACAACCATTCCGAGG +
Preference number: 5 (lower is better)
Translates to: SSSTALRLARCRCRSSTRRMTTQ*QTTIPR
Trigger: CCTCGGAATGGTTGTCTGCAACTGGGTAGTCATCCT...CCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp CGGCCCCGTGGGGAGTGGCTGCTGCTGGAAGATGAGCTCAGGAGTCAGGTCCACCAGCAGAGGAACACTTaGAGCCGGCGCGACCAGCTG +
Preference number: 5 (lower is better)
Translates to: RPRGEWLLLEDELRSQVHQQRNT*SRRDQL
Trigger: CAGCTGGTCGCGCCGGCTCAAAGTGTTCCTCTGCTG...GTGGACCTGACTCCTGAGCTCATCTTCCAGCAGCAGCCACTCCCCACGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp TCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGCAGCACCAGGATCACCACTTTCTTCTaGTCATGGTCCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: SSSTALRLARCRCRSSTRITTFF*SWSTAT
Trigger: CGTGGCGGTGGACCATGACAAGAAGAAAGTGGTGAT...CCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCTCAGGCAGCTCCGACTaGGGGATGCATTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPSGSSD*GMHLVA
Trigger: GGCCACCAAATGCATCCCCAAGTCGGAGCTGCCTGA...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCCCTGGGTGCCCAGGATaGAGCCCAAGCCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: TPSHPASGETPGRYLPNCPGCPG*SPSLPQ
Trigger: CTGGGGCAGGCTTGGGCTCAATCCTGGGCACCCAGG...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTCTCCTGACGCTGCTGTaGCGGTGGTCTGCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: LGRMARKRVHEGLWGPAALLTLL*RWSAVG
Trigger: GCCGACTGCAGACCACCGCAACAGCAGCGTCAGGAG...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGGCTTGGGCACCAGGTaGGGCTCGAACTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYGLGTR*GSNWAR
Trigger: CCGTGCCCAGTTCGAGCCCAACCTGGTGCCCAAGCC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAAGAGCCGTGGGGGCTaGGGCACCAGGTTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPKSRGG*GTRLGS
Trigger: CGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTT...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTGTAGAAGTCCGGATCTaGTCAGCCGCCAGGCATTCC +
Preference number: 5 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGVEVRI*SAARHS
Trigger: GGAATGCCTGGCGGCTGACAAGATCCGGACTTCTAC...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AGGGTCTGTGGGGCCCGGCTGCTCGCTACTGATTGCATATGGAGTCGCCCAGGCGTGATGGGAGGCAGCTaGCCCATGGCCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: RVCGARLLATDCIWSRPGVMGGS*PMACPG
Trigger: TCCAGGACAGGCCATGGGCAAGCTGCCTCCCATCAC...GCCTGGGCGACTCCATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CAGCAGCACTGCTCTGCAGGGTGGTTGTGGACCACGTGGATGATGCGGCCGGGCTGCCTAAAGCTGAGCTaGTCCCTGCGACCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: QQHCSAGWLWTTWMMRPGCLKLS*SLRPCL
Trigger: GAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCA...GCCCGGCCGCATCATCCACGTGGTCCACAACCACCCTGCAGAGCAGTGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTGACAGGCCCGCGCACTaGTGCTGCAGGTCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: LGRMARKRVHEGLWGPAADRPAH*CCRSGD
Trigger: ATCCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTC...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AGCTGGGGTGGTCACAGCAGTGCCCACCACCCTTTGGGTGGTGAGGATCCTTGGGACAGGCCCGCGCACTaGTGCTGCAGGTCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: SWGGHSSAHHPLGGEDPWDRPAH*CCRSGD
Trigger: ATCCCCAGACCTGCAGCACAAGTGCGCGGGCCTGTC...CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACTGCTGTGACCACCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS TCA 90 bp CACGGGGCTCCGTGTAGAGGATGCCCCCGCGCATGCTCAGCCAGATaGTGGCCATCTCAGCGATCATGCAGCTCAGCAGGATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: HGAPCRGCPRACSAR*WPSQRSCSSAGCPG
Trigger: ACCTGGGCATCCTGCTGAGCTGCATGATCGCTGAGATGGCCATCATCTGGCTGAGCATGCGCGGGGGCATCCTCTACACGGAGCCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS CCA 90 bp ACTCGATCACCAGGATGGCCAGGCGCACGTAGAGCACGTACTGCATaGAGTCACGGGGCTCCGTGTAGAGGATGCCCCCGCGCATGCTCA +
Preference number: 5 (lower is better)
Translates to: TRSPGWPGARRARTA*SHGAPCRGCPRACS
Trigger: TGAGCATGCGCGGGGGCATCCTCTACACGGAGCCCCGTGACTCCATGCAGTACGTGCTCTACGTGCGCCTGGCCATCCTGGTGATCGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257215.10
CDS-3UTR CAA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCCGAGGGTGACATTCTaGGCAGTGAGGTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAPRVTF*AVRSLQ
Trigger: CTGCAACGACCTCACTGCCAAGAATGTCACCCTCGG...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCGAGAGGACCATACCCTaGTGGCCCAGCCAGGTGCCG +
Preference number: 5 (lower is better)
Translates to: SVPDGSSWGGRHAHIRGPERTIP*WPSQVP
Trigger: CGGCACCTGGCTGGGCCACAAGGGTATGGTCCTCTC...GGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TCCGCCATTTGGGCTTGGTGCTTCGCTGCAGGACATCCAGGAGCTGTCTGCGGAGAGAGGACCATACCCTaGTGGCCCAGCCAGGTGCCG +
Preference number: 5 (lower is better)
Translates to: SAIWAWCFAAGHPGAVCGERTIP*WPSQVP
Trigger: CGGCACCTGGCTGGGCCACAAGGGTATGGTCCTCTC...TCCGCAGACAGCTCCTGGATGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGGACTTGGGGATGCATTaGGTGGCCCCCACGATGATC +
Preference number: 5 (lower is better)
Translates to: LATDCIWSRPGPWEDRPADLGMH*VAPTMI
Trigger: GATCATCGTGGGGGCCACCAAATGCATCCCCAAGTC...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGTGCTCTGCAGGGTGGTaGTGGACCACGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: LATDCIWSRPGPWEDRPACSAGW*WTTWMM
Trigger: CATCATCCACGTGGTCCACAACCACCCTGCAGAGCA...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CCGCTGCAGAATGAAGGCACGAGCAGGCGGTCAGCCGTGCAGTCAGCGCCTCGGACCTCATTGAAGGCCTaGTTGTCGCCCCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: PLQNEGTSRRSAVQSAPRTSLKA*LSPQMA
Trigger: TGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGT...CCGAGGCGCTGACTGCACGGCTGACCGCCTGCTCGTGCCTTCATTCTGCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCTACGTGTCCTGTGAGTGCTaGGACAGGCTGTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: KLSLSLRPCLKGPIMLPYVSCEC*DRLSAA
Trigger: GGCGGCCGACAGCCTGTCCAAGCACTCACAGGACAC...GTAGGGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTCCCAAACCCAGCAGGGGAGGGTGTCCTGTGAGTGCTaGGACAGGCTGTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GKLRVAISLTASQTQQGRVSCEC*DRLSAA
Trigger: GGCGGCCGACAGCCTGTCCAAGCACTCACAGGACAC...CCTCCCCTGCTGGGTTTGGGAAGCAGTTAGGGAGATAGCGACCCGGAGTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCACCAGCTCATCTTGCTaGGCGGGGCTGGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: PKAELVPATLPQRPHHAPTSSSC*AGLAPW
Trigger: CCACGGAGCCAGCCCCGCCAAGCAAGATGAGCTGGT...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS GCA 90 bp TATGCAGGAGAAAGAGGAAGATGGCCGGTAGGACGAGGTCATCACTaGCCACAGACCAGCGCCGCCGGAACACCACGATCCCGGGCATGG +
Preference number: 5 (lower is better)
Translates to: YAGERGRWPVGRGHH*PQTSAAGTPRSRAW
Trigger: CCATGCCCGGGATCGTGGTGTTCCGGCGGCGCTGGTCTGTGGGCAGTGATGACCTCGTCCTACCGGCCATCTTCCTCTTTCTCCTGCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTTGGTGGCTCTCAGCTaGACAAAGGTGCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: TPSHPASGETPGRYLPNCLVALS*TKVRPV
Trigger: CACGGGCCGCACCTTTGTCAAGCTGAGAGCCACCAA...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTACGATGATCCGCCATTaGGGCTTGGTGCTTCGCTGC +
Preference number: 5 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTTMIRH*GLVLRC
Trigger: GCAGCGAAGCACCAAGCCCAAATGGCGGATCATCGT...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGACCTCATTGAAGGCCTaGTTGTCGCCCCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: SLPMACPGAGGARMPPWRTSLKA*LSPQMA
Trigger: TGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGT...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGACGGAGCAGGATCTCTaGCTGGCTGGGGGACTTGGG +
Preference number: 5 (lower is better)
Translates to: QARWEQMVPKAELVPATLTEQDL*LAGGLG
Trigger: CCCAAGTCCCCCAGCCAGCAAGAGATCCTGCTCCGT...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCAGATCCCAGCCACCTaGGCTCTGGGGGTCCTAAGC +
Preference number: 5 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVQIPAT*ALGVLS
Trigger: GCTTAGGACCCCCAGAGCCAAGGTGGCTGGGATCTG...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp ACACCCTCCCACCCCGCTTCTGGGGAAACTCCGGGTCGCTATCTCCCTAACTGCTGCCTAAAGCTGAGCTaGTCCCTGCGACCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: TPSHPASGETPGRYLPNCCLKLS*SLRPCL
Trigger: GAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCA...GCAGTTAGGGAGATAGCGACCCGGAGTTTCCCCAGAAGCGGGGTGGGAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTGTGCTGCAGGTGACTGGCCACGGTGCTaGTCAGATCTTTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: YGVAQAPGRTGPRTCAAGDWPRC*SDLSSE
Trigger: CTCAGATGAAAGATCTGACAAGCACCGTGGCCAGTC...ACCTGCAGCACAAGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTACCGAGGGTGACATTCTaGGCAGTGAGGTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLPRVTF*AVRSLQ
Trigger: CTGCAACGACCTCACTGCCAAGAATGTCACCCTCGG...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGCACTTTACGCTGCCTCCTCTaGGTGGCTCTCAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: LLIAYGVAQAPGRTGPRTLRCLL*VALSLT
Trigger: TGTCAAGCTGAGAGCCACCAAGAGGAGGCAGCGTAA...AGTGCGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGTCGTCCAGCACGGCGTaGCGCTTGGCCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLSSSTA*RLARCR
Trigger: GCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGA...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CTCGCTACTGATTGCATATGGAGTCGCCCAGGCCCCTGGGAGGACAGGCCCGCGAAGGCCAAGATGTCATaGTTTGCCTCGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LATDCIWSRPGPWEDRPAKAKMS*FASSST
Trigger: CGTGCTGGACGAGGCAAACAATGACATCTTGGCCTT...CGCGGGCCTGTCCTCCCAGGGGCCTGGGCGACTCCATATGCAATCAGTAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTTCAGTCAGGGCATCCTaGGGGGACAGGGTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: FQNGSQQQARWEQMVPKASVRAS*GDRVPR
Trigger: CCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGA...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGGCAGTCACGAACTCCTaGGAATACTCCATCGCATCC +
Preference number: 5 (lower is better)
Translates to: SLPMACPGAGGARMPPWRAVTNS*EYSIAS
Trigger: GGATGCGATGGAGTATTCCAAGGAGTTCGTGACTGC...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGTAGTAGCAGACCTCTTTGTACTCCTGACGCTGCTGTaGCGGTGGTCTGCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: GPPVGSQGKEHVVADLFVLLTLL*RWSAVG
Trigger: GCCGACTGCAGACCACCGCAACAGCAGCGTCAGGAG...TACAAAGAGGTCTGCTACTACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp AGCTTGCCCATGGCCTGTCCTGGAGCAGGGGGTGCCAGAATGCCCCCATGGAGGCTCTTGCTGTCCAGGTaGAAGAGGCTGTCGATGAAC +
Preference number: 5 (lower is better)
Translates to: SLPMACPGAGGARMPPWRLLLSR*KRLSMN
Trigger: GTTCATCGACAGCCTCTTCAACCTGGACAGCAAGAG...CCTCCATGGGGGCATTCTGGCACCCCCTGCTCCAGGACAGGCCATGGGCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTGTAGAAGTCCGGATCTaGTCAGCCGCCAGGCATTCC +
Preference number: 5 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAVEVRI*SAARHS
Trigger: GGAATGCCTGGCGGCTGACAAGATCCGGACTTCTAC...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGCCCATCCTTCAAGGGCGAGGTGGGTAGGAGCCAGGTTAGGGGTGGGCTGCCCGCCACTGATTTTGTCTaGCTTCTGTGCTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GPSFKGEVGRSQVRGGLPATDFV*LLCWAE
Trigger: TTCAGCCCAGCACAGAAGCAAGACAAAATCAGTGGC...GGGCAGCCCACCCCTAACCTGGCTCCTACCCACCTCGCCCTTGAAGGATGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CATTGTTTGCCTCGTCCAGCACGGCGTTGCGCTTGGCCCGCTGCCGCTGCCGGAGCCACTGATTTTGTCTaGCTTCTGTGCTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: HCLPRPARRCAWPAAAAGATDFV*LLCWAE
Trigger: TTCAGCCCAGCACAGAAGCAAGACAAAATCAGTGGC...TCCGGCAGCGGCAGCGGGCCAAGCGCAACGCCGTGCTGGACGAGGCAAACAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTATTGAGGTCGAGGTACTaGGTGTTTCTGGTCACCGGC +
Preference number: 5 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLLRSRY*VFLVTG
Trigger: GCCGGTGACCAGAAACACCAAGTACCTCGACCTCAA...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGAGACTTGGGGATGCATTaGGTGGCCCCCACGATGATC +
Preference number: 5 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGDLGMH*VAPTMI
Trigger: GATCATCGTGGGGGCCACCAAATGCATCCCCAAGTC...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AATGATGTCGGATGGCACAATGTCAAGGTCCCGGAAGAACTCCGCAAAGAGGTATCCCCCAGGCGCCCATaGTGCAGCGCCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: NDVGWHNVKVPEELRKEVSPRRP*CSASSP
Trigger: CGGGGAGCTGGCGCTGCACAATGGGCGCCTGGGGGA...TACCTCTTTGCGGAGTTCTTCCGGGACCTTGACATTGTGCCATCCGACATCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGCCCCCAGGTACCAGTGATCATGAGAGGGAGGTCTCTTGGTCGGGGGAGCCTATGGAAGGAGCTGCTCTaGCTGTCCAGGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GPQVPVIMRGRSLGRGSLWKELL*LSRLKR
Trigger: CCTCTTCAACCTGGACAGCAAGAGCAGCTCCTTCCA...TAGGCTCCCCCGACCAAGAGACCTCCCTCTCATGATCACTGGTACCTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCAAGAGCCGTGGGGGCTaGGGCACCAGGTTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIKSRGG*GTRLGS
Trigger: CGAGCCCAACCTGGTGCCCAAGCCCCCACGGCTCTT...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CCTAAAGCTGAGCTTGTCCCTGCGACCCTGCCTCAAAGGCCCCATCATGCTCCCCCAAGATGTCATTGTTaGCCTCGTCCAGCACGGCGT +
Preference number: 5 (lower is better)
Translates to: PKAELVPATLPQRPHHAPPRCHC*PRPARR
Trigger: ACGCCGTGCTGGACGAGGCAAACAATGACATCTTGG...GGGAGCATGATGGGGCCTTTGAGGCAGGGTCGCAGGGACAAGCTCAGCTTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CTGGGGAGAATGGCACGTAAGAGAGTGCATGAGGGTCTGTGGGGCCCGGCTGCTAAGGCCAAGATGTCATaGTTTGCCTCGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LGRMARKRVHEGLWGPAAKAKMS*FASSST
Trigger: CGTGCTGGACGAGGCAAACAATGACATCTTGGCCTT...AGCAGCCGGGCCCCACAGACCCTCATGCACTCTCTTACGTGCCATTCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGCATCTCAGACTGGGACTaGCTCCTGACGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RRDGNRWCLKLSLSLRPCISDWD*LLTLLL
Trigger: CAACAGCAGCGTCAGGAGCAAGTCCCAGTCTGAGAT...GCAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGACGGAGCAGGATCTCTaGCTGGCTGGGGGACTTGGG +
Preference number: 5 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMTEQDL*LAGGLG
Trigger: CCCAAGTCCCCCAGCCAGCAAGAGATCCTGCTCCGT...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTAGTGCCCACCACCCTTaGGGTGGTGAGGATCCTTGG +
Preference number: 5 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLASAHHP*GGEDPW
Trigger: CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACT...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp ACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACCGCGGCCTGACTGGCCACGGTGCTaGTCAGATCTTTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: TATAVVFLDGDSRGEPRPDWPRC*SDLSSE
Trigger: CTCAGATGAAAGATCTGACAAGCACCGTGGCCAGTC...AGGCCGCGGTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCAGGATGACTACCCAGTaGCAGACAACCATTCCGAGG +
Preference number: 5 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVRMTTQ*QTTIPR
Trigger: CCTCGGAATGGTTGTCTGCAACTGGGTAGTCATCCT...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CAGTTGGCAGAGGCCGCAGGCGGGCTTCCGCATCAGGTACATGGGCCACCCGTAATCTCTTGTGAATTCTaGAGGTCGAGGTACTTGGTG +
Preference number: 5 (lower is better)
Translates to: QLAEAAGGLPHQVHGPPVISCEF*RSRYLV
Trigger: CACCAAGTACCTCGACCTCAAGAATTCACAAGAGAT...TACGGGTGGCCCATGTACCTGATGCGGAAGCCCGCCTGCGGCCTCTGCCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTACGATGATCCGCCATTaGGGCTTGGTGCTTCGCTGC +
Preference number: 5 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLATMIRH*GLVLRC
Trigger: GCAGCGAAGCACCAAGCCCAAATGGCGGATCATCGT...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GGGCCACCCGTAGGCAGCCAGGGCAAAGAGCATGTAGTAGCAGACCTCTTTGTATGCTCTGCAGGGTGGTaGTGGACCACGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: GPPVGSQGKEHVVADLFVCSAGW*WTTWMM
Trigger: CATCATCCACGTGGTCCACAACCACCCTGCAGAGCA...TACAAAGAGGTCTGCTACTACATGCTCTTTGCCCTGGCTGCCTACGGGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp TCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCCAGGATCATTGAAGGCCTTGTaGTCGCCCCAGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SLMARPGVDDMPTLEVPGSLKAL*SPQMAK
Trigger: CTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGA...TCCTGGGACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp CAGGCGCGATGGGAACAGATGGTGCCTAAAGCTGAGCTTGTCCCTGCGACCCTGGAGATGATCACCTCATaGAAGGCCTTGTTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: QARWEQMVPKAELVPATLEMITS*KALLSP
Trigger: GGGCGACAACAAGGCCTTCAATGAGGTGATCATCTC...CAGGGTCGCAGGGACAAGCTCAGCTTTAGGCACCATCTGTTCCCATCGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCAGATCTCAGACTGGGACTaGCTCCTGACGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AKPSSFCKHVQHCRPPRQISDWD*LLTLLL
Trigger: CAACAGCAGCGTCAGGAGCAAGTCCCAGTCTGAGAT...CTGCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GGTCTGTCCCTGATGGCTCGTCCTGGGGTGGACGACATGCCCACATTAGAGGTCCATGCAGTAGAGGTCTaGGAAGGAGCTGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GLSLMARPGVDDMPTLEVHAVEV*EGAALA
Trigger: AGCAAGAGCAGCTCCTTCCAAGACCTCTACTGCATG...GACCTCTAATGTGGGCATGTCGTCCACCCCAGGACGAGCCATCAGGGACAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCATCACCACTTTCTTCTaGTCATGGTCCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGITTFF*SWSTAT
Trigger: CGTGGCGGTGGACCATGACAAGAAGAAAGTGGTGAT...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTGCAGTCACGAACTCCTaGGAATACTCCATCGCATCC +
Preference number: 5 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFAVTNS*EYSIAS
Trigger: GGATGCGATGGAGTATTCCAAGGAGTTCGTGACTGC...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTATCCGCCATTTGGGCTaGGTGCTTCGCTGCAGGACA +
Preference number: 5 (lower is better)
Translates to: FQNGSQQQARWEQMVPKAIRHLG*VLRCRT
Trigger: TGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGAT...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GTCAGTCAGGGCATCCTTGGGGGACAGGGTCCCCCGGATACTGATCACCACTTTTCATTGAAGGCCTTGTaGTCGCCCCAGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VSQGILGGQGPPDTDHHFSLKAL*SPQMAK
Trigger: CTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGA...AAAGTGGTGATCAGTATCCGGGGGACCCTGTCCCCCAAGGATGCCCTGACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp AAGTGGCGCCGGATGGCAATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGTTACGCTGCCTCCTCTaGGTGGCTCTCAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: KWRRMAMALQPQQLSSSMLRCLL*VALSLT
Trigger: TGTCAAGCTGAGAGCCACCAAGAGGAGGCAGCGTAA...CATCGAGGAAGACAACTGCTGTGGCTGTAATGCCATTGCCATCCGGCGCCACTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp ATGCAGCATGGCTGGCGAGATGATCACCTCATTGAAGGCCTTGTTGTCGCCCCACCAAGATGTCATTGTTaGCCTCGTCCAGCACGGCGT +
Preference number: 5 (lower is better)
Translates to: MQHGWRDDHLIEGLVVAPPRCHC*PRPARR
Trigger: ACGCCGTGCTGGACGAGGCAAACAATGACATCTTGG...TGGGGCGACAACAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCATCCGCCATTTGGGCTaGGTGCTTCGCTGCAGGACA +
Preference number: 5 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIIRHLG*VLRCRT
Trigger: TGTCCTGCAGCGAAGCACCAAGCCCAAATGGCGGAT...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AAGATGAGCTCAGGAGTCAGGTCCACCTCGGTAGGGCTCACCATGACCTTGGCTGAGATGATCACCTCATaGAAGGCCTTGTTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: KMSSGVRSTSVGLTMTLAEMITS*KALLSP
Trigger: GGGCGACAACAAGGCCTTCAATGAGGTGATCATCTC...AGCCAAGGTCATGGTGAGCCCTACCGAGGTGGACCTGACTCCTGAGCTCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp GACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTTTCATCTGAGTGCCCACCACCCTTaGGGTGGTGAGGATCCTTGG +
Preference number: 5 (lower is better)
Translates to: DIKSLPVTGHGACQIFHLSAHHP*GGEDPW
Trigger: CCAAGGATCCTCACCACCCAAAGGGTGGTGGGCACT...CAGATGAAAGATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCTGGAAGGAGCTGCTCTaGCTGTCCAGGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KRPDIKSLPVTGHGACQIWKELL*LSRLKR
Trigger: CCTCTTCAACCTGGACAGCAAGAGCAGCTCCTTCCA...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp GAGCCAAGCCCAGCAGCTTCTGTAAACATGTACAGCACTGCAGGCCACCTCGGCATCTCTTGTGAATTCTaGAGGTCGAGGTACTTGGTG +
Preference number: 5 (lower is better)
Translates to: EPSPAASVNMYSTAGHLGISCEF*RSRYLV
Trigger: CACCAAGTACCTCGACCTCAAGAATTCACAAGAGAT...GCCGAGGTGGCCTGCAGTGCTGTACATGTTTACAGAAGCTGCTGGGCTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp TTCCAAAACGGGTCACAGCAGCAGGCGCGATGGGAACAGATGGTGCCTAAAGCTTTACAGCCACAGCAGTaGTCTTCCTCGATGGTGACT +
Preference number: 5 (lower is better)
Translates to: FQNGSQQQARWEQMVPKALQPQQ*SSSMVT
Trigger: AGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAA...AGCTTTAGGCACCATCTGTTCCCATCGCGCCTGCTGCTGTGACCCGTTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS-3UTR CAA 90 bp ATGGCATTACAGCCACAGCAGTTGTCTTCCTCGATGGTGACTCCAGGGGCGAACTTACAGCCACAGCAGTaGTCTTCCTCGATGGTGACT +
Preference number: 5 (lower is better)
Translates to: MALQPQQLSSSMVTPGANLQPQQ*SSSMVT
Trigger: AGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAA...GTTCGCCCCTGGAGTCACCATCGAGGAAGACAACTGCTGTGGCTGTAATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540717.1
CDS-3UTR CAA 90 bp AAAAGGCCAGACATCAAGTCTCTCCCTGTGACTGGCCACGGTGCTTGTCAGATCCTCTTGCTGTCCAGGTaGAAGAGGCTGTCGATGAAC +
Preference number: 5 (lower is better)
Translates to: KRPDIKSLPVTGHGACQILLLSR*KRLSMN
Trigger: GTTCATCGACAGCCTCTTCAACCTGGACAGCAAGAG...GATCTGACAAGCACCGTGGCCAGTCACAGGGAGAGACTTGATGTCTGGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS CCA 72 bp GCGCCGCCGGAACACCACGATCCCGGGCATGGCTGGTaGCTCTGCAGAGGCTCAGTGGGCCTGGTGCTCACC +
Preference number: 6 (lower is better)
Translates to: APPEHHDPGHGW*LCRGSVGLVLT
Trigger: GGTGAGCACCAGGCCCACTGAGCCTCTGCAGAGCCACCAGCCATGCCCGGGATCGTGGTGTTCCGGCGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS CCA 72 bp CCAGGATGGCCAGGCGCACGTAGAGCACGTACTGCATaGAGTCACGGGGCTCCGTGTAGAGGATGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: PGWPGARRARTA*SHGAPCRGCPR
Trigger: GCGGGGGCATCCTCTACACGGAGCCCCGTGACTCCATGCAGTACGTGCTCTACGTGCGCCTGGCCATCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257215.10
CDS CAA 72 bp CGCAGGTTACGCTGCCTCCTCTTGGTGGCTCTCAGCTaGACAAAGGTGCGGCCCGTGGGGTCGAAGACGCAG +
Preference number: 6 (lower is better)
Translates to: RRLRCLLLVALS*TKVRPVGSKTQ
Trigger: CTGCGTCTTCGACCCCACGGGCCGCACCTTTGTCAAGCTGAGAGCCACCAAGAGGAGGCAGCGTAACCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS TCA 72 bp GCAGGTTACGCTGCCTCCTCTTGGTGGCTCTCAGCTTaGCAAAGGTGCGGCCCGTGGGGTCGAAGACGCAGA +
Preference number: 6 (lower is better)
Translates to: AGYAASSWWLSA*QRCGPWGRRRR
Trigger: TCTGCGTCTTCGACCCCACGGGCCGCACCTTTGTCAAGCTGAGAGCCACCAAGAGGAGGCAGCGTAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS GCA 72 bp GAAAGAGGAAGATGGCCGGTAGGACGAGGTCATCACTaGCCACAGACCAGCGCCGCCGGAACACCACGATCC +
Preference number: 6 (lower is better)
Translates to: ERGRWPVGRGHH*PQTSAAGTPRS
Trigger: GGATCGTGGTGTTCCGGCGGCGCTGGTCTGTGGGCAGTGATGACCTCGTCCTACCGGCCATCTTCCTCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1
CDS TCA 72 bp CCGTGTAGAGGATGCCCCCGCGCATGCTCAGCCAGATaGTGGCCATCTCAGCGATCATGCAGCTCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PCRGCPRACSAR*WPSQRSCSSAG
Trigger: TCCTGCTGAGCTGCATGATCGCTGAGATGGCCATCATCTGGCTGAGCATGCGCGGGGGCATCCTCTACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257215.10
ENST00000540717.1