RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DACH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000126733

Ensembl transcript IDs: ENST00000373125.9, ENST00000373131.5, ENST00000461604.6, ENST00000484479.1, ENST00000506327.6, ENST00000508860.5, ENST00000510272.5, ENST00000613770.4

Found 579 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGTCGGAGTGATAAGTCCTGGCGATAAGAGGCCTGGGACTGCATaGGTCAGAAGGCGGGCATTTTCCTGCAACACTCCCAAAGAACGC +
Preference number: 1 (lower is better)
Translates to: PVGVISPGDKRPGTA*VRRRAFSCNTPKER
Trigger: GCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCTCTTATCGCCAGGACTTATCACTCCGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR CCA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATaGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTG +
Preference number: 1 (lower is better)
Translates to: GQQSLHGGQTISKNE*SRESSGQCLPRSQL
Trigger: CAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR TCA 90 bp TGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCA +
Preference number: 1 (lower is better)
Translates to: CWSTESPRRTDYQQK*MVQGIQRAMPAQES
Trigger: TGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR GCA 90 bp AACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGCTTTGATTCAAATTCCAAGGCTTCC +
Preference number: 1 (lower is better)
Translates to: NILRPLSLVVACLSA*STCSRRFDSNSKAS
Trigger: GGAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR CCA 90 bp CCAAATGATGATCCATCTGAGAGGGAGAGCTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGCTCCCAGGACGATGATTCTCTTCTA +
Preference number: 1 (lower is better)
Translates to: PNDDPSERESWTHCC*CGKRSGSQDDDSLL
Trigger: TAGAAGAGAATCATCGTCCTGGGAGCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTCCCTCTCAGATGGATCATCATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR GCA 90 bp TTTCCAAATGATGATCCATCTGAGAGGGAGAGCTGGACACACTGCTaGTGGTGTGGGAAGAGGTCTGGCTCCCAGGACGATGATTCTCTT +
Preference number: 1 (lower is better)
Translates to: FPNDDPSERESWTHC*WCGKRSGSQDDDSL
Trigger: AAGAGAATCATCGTCCTGGGAGCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTCCCTCTCAGATGGATCATCATTTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR GCA 90 bp AGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCAAATTCCAAGGCTTCCTGCAATTTT +
Preference number: 1 (lower is better)
Translates to: RPLSLVVACLSACST*SRRFDSNSKASCNF
Trigger: AAAATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR GCA 90 bp CCATGTAATCCTTCCTTTAGCACAGCACTGCCTGACATGGGCATATaGCATGACACAGAAGGTCAGTGTGGACACTCCACACAGGAGATG +
Preference number: 1 (lower is better)
Translates to: PCNPSFSTALPDMGI*HDTEGQCGHSTQEM
Trigger: CATCTCCTGTGTGGAGTGTCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCTAAAGGAAGGATTACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR GCA 90 bp CCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTaGTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAAT +
Preference number: 1 (lower is better)
Translates to: PVSFNILRPLSLVVA*LSACSTCSRRFDSN
Trigger: ATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR CCA 90 bp CTCTGGGATCCGCTCCTTTATAACAGAGGTACCAGCTCTGGAGAGTaGACTGTGAATCTGTGCTGCAGCAGCCATGTTGGCAATAGTATT +
Preference number: 1 (lower is better)
Translates to: LWDPLLYNRGTSSGE*TVNLCCSSHVGNSI
Trigger: AATACTATTGCCAACATGGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTGTTATAAAGGAGCGGATCCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR TCA 90 bp ATCCGCTCCTTTATAACAGAGGTACCAGCTCTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCCATGTTGGCAATAGTATTGAGATGG +
Preference number: 1 (lower is better)
Translates to: IRSFITEVPALESGL*ICAAAAMLAIVLRW
Trigger: CCATCTCAATACTATTGCCAACATGGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTGTTATAAAGGAGCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR GCA 90 bp CTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATT +
Preference number: 1 (lower is better)
Translates to: LSAKMNGPGNPAGNA*PGVSCILSKGDFII
Trigger: AATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR CCA 90 bp ACAAAAGTCCATGTAATCCTTCCTTTAGCACAGCACTGCCTGACATaGGCATATGCCATGACACAGAAGGTCAGTGTGGACACTCCACAC +
Preference number: 1 (lower is better)
Translates to: TKVHVILPLAQHCLT*AYAMTQKVSVDTPH
Trigger: GTGTGGAGTGTCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCTAAAGGAAGGATTACATGGACTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR TCA 90 bp AGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTGAACTGGTACCTCTTCCATTCTTTC +
Preference number: 1 (lower is better)
Translates to: SGQCLPRSQLYLVQG*LHYWNLNWYLFHSF
Trigger: GAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR GCA 90 bp CCAGTCGCAGCTCCTTCTTTTCTTGTTGAATCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGG +
Preference number: 1 (lower is better)
Translates to: PVAAPSFLVESASPG*EHYPKQLSADPECW
Trigger: CCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR TCA 90 bp TCAGTGTGGACACTCCACACAGGAGATGAACCTCTCCTAATCAGTTaGGTTATCTTTACTGGGCCACAAATAGCTGCTCCAAACTCAAGT +
Preference number: 1 (lower is better)
Translates to: SVWTLHTGDEPLLIS*VIFTGPQIAAPNSS
Trigger: ACTTGAGTTTGGAGCAGCTATTTGTGGCCCAGTAAAGATAACTCAACTGATTAGGAGAGGTTCATCTCCTGTGTGGAGTGTCCACACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR TCA 90 bp TATGCCATGACACAGAAGGTCAGTGTGGACACTCCACACAGGAGATaGACCTCTCCTAATCAGTTGAGTTATCTTTACTGGGCCACAAAT +
Preference number: 1 (lower is better)
Translates to: YAMTQKVSVDTPHRR*TSPNQLSYLYWATN
Trigger: ATTTGTGGCCCAGTAAAGATAACTCAACTGATTAGGAGAGGTTCATCTCCTGTGTGGAGTGTCCACACTGACCTTCTGTGTCATGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR GCA 90 bp AAAGTAAAAACAAAAGTCCATGTAATCCTTCCTTTAGCACAGCACTaGCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGAC +
Preference number: 1 (lower is better)
Translates to: KVKTKVHVILPLAQH*LTWAYAMTQKVSVD
Trigger: GTCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCTAAAGGAAGGATTACATGGACTTTTGTTTTTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR CCA 90 bp GGGTTAACCCTGAGACTGTGTATACTGCATGAAGGGAGACTAGTTTaGAATATCGTTTCAGCTACAGTGTTTAGTCAAACCGGTATCCCT +
Preference number: 1 (lower is better)
Translates to: GLTLRLCILHEGRLV*NIVSATVFSQTGIP
Trigger: AGGGATACCGGTTTGACTAAACACTGTAGCTGAAACGATATTCCAAACTAGTCTCCCTTCATGCAGTATACACAGTCTCAGGGTTAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR GCA 90 bp CCTTTATTTAGAGACAGAAATATTTGCCCACATCCTTTATGTGTCTaGTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAA +
Preference number: 1 (lower is better)
Translates to: PLFRDRNICPHPLCV*LQGLLGIVPIAAQK
Trigger: TTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACACATAAAGGATGTGGGCAAATATTTCTGTCTCTAAATAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR GCA 90 bp TTCTATATTTTCATCTGTCAGTTTTCAAAGATCCTTCAAATTTCATaGTATAGCTTCTGTTCTTCTTTCCACAGCACCGGAGACATTGAA +
Preference number: 1 (lower is better)
Translates to: FYIFICQFSKILQIS*YSFCSSFHSTGDIE
Trigger: TTCAATGTCTCCGGTGCTGTGGAAAGAAGAACAGAAGCTATAGCATGAAATTTGAAGGATCTTTGAAAACTGACAGATGAAAATATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR GCA 90 bp CGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTACGCCTCAGCCATCGCTaGAGCTGTTATACCTGTCGG +
Preference number: 2 (lower is better)
Translates to: RAMPAQESAVSCPRVTSLRLSHR*SCYTCR
Trigger: CCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCG...TAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CCA 90 bp ACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTGCAGACCCTGAATGTTaGTCAACAGAGTCTCCACGG +
Preference number: 2 (lower is better)
Translates to: TVTSGGLLKCLLHLLPALADPEC*STESPR
Trigger: CCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGC...AAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR GCA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCTCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: GPGNPAGNACPGVSCILSSASPG*EHYPKQ
Trigger: TTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGA...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR CCA 90 bp GGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCAGTGGATTGAGGGTTaGAGCACCCCCAATGCCTGG +
Preference number: 2 (lower is better)
Translates to: GQTISKNEWSRESSGQCLQWIEG*STPNAW
Trigger: CCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTG...CAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR TCA 90 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTGAGGACCTTTCAGGCTaGATACAACTGTTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: KMNGPGNPAGNACPGVSCEDLSG*IQLLCH
Trigger: ATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTC...ACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR TCA 90 bp ACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAG +
Preference number: 2 (lower is better)
Translates to: TVTSGGLLKCLLHLLPALDYQQK*MVQGIQ
Trigger: CTGGATTCCCTGGACCATTCATTTTTGCTGATAGTC...AAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR GCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGCCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATC +
Preference number: 2 (lower is better)
Translates to: CEHYPKQLSADPECWSTEPAGNA*PGVSCI
Trigger: GATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGG...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR GCA 90 bp ACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATCCAGCGGGCAATaGCTGCCCAGGAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: TLNVGQQSLHGGQTISKNESSGQ*LPRSQL
Trigger: CAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTC...ATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR GCA 90 bp CGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTAGTTAGCAGGTGGTTCTaGTGCAGTGGATTGAGGGTT +
Preference number: 2 (lower is better)
Translates to: RAMPAQESAVSCPRVTSLVSRWF*CSGLRV
Trigger: AACCCTCAATCCACTGCAGCAGAACCACCTGCTAAC...TAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CCA 90 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTAGGAGAAGGACTCTCTaGGATCCGCTCCTTTATAAC +
Preference number: 2 (lower is better)
Translates to: KMNGPGNPAGNACPGVSCRRRTL*DPLLYN
Trigger: GTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCT...ACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR TCA 90 bp GTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATACTTTCAGCAGACCCTaGATGTTGGTCAACAGAGTC +
Preference number: 2 (lower is better)
Translates to: VVACLSACSTCSRRFDSNTFSRP*MLVNRV
Trigger: GACTCTGTTGACCAACATTCAGGGTCTGCTGAAAGT...ATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR TCA 90 bp GGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGTTGCTCCCGGCGCTTTaGTTCAAATTCCAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: GQTISKNEWSRESSGQCLLLPAL*FKFQGF
Trigger: GAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAA...CAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR GCA 90 bp CTTCCACCTGTGTTAGAATTAAGATCATCAGGCTCTGATTCGGTCCCATTTTGGGAATCCAGCGGGCAATaGCTGCCCAGGAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LPPVLELRSSGSDSVPFWESSGQ*LPRSQL
Trigger: CAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTC...CCAAAATGGGACCGAATCAGAGCCTGATGATCTTAATTCTAACACAGGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR GCA 90 bp CAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGGCGGGCATTTTCCTaGAACACTCCCAAAGAACGC +
Preference number: 2 (lower is better)
Translates to: QSLHGGQTISKNEWSRESRRAFS*NTPKER
Trigger: GCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCT...GGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CCA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGAAAGAGGAAGCAAGATTaGGGATGGGAGGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: STALPDMGICHDTEGQCGKRKQD*GWEERR
Trigger: TCTTCTCTCCTCCCATCCCCAATCTTGCTTCCTCTT...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp GGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAG +
Preference number: 2 (lower is better)
Translates to: GQTISKNEWSRESSGQCLDYQQK*MVQGIQ
Trigger: CTGGATTCCCTGGACCATTCATTTTTGCTGATAGTC...CAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR TCA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGAATGCTAGGGCAGACGTaGAAACAACACAATGGATTA +
Preference number: 2 (lower is better)
Translates to: STALPDMGICHDTEGQCGMLGQT*KQHNGL
Trigger: TAATCCATTGTGTTGTTTTCACGTCTGCCCTAGCAT...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp GATGCCAGTAATGAACTGCTGACACTGATCCTTGGAGCAATCTCAAAGTTTGCCAAGAGGGACACACACTaGCATTTGGGGAGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: DASNELLTLILGAISKFAKRDTH*HLGRAD
Trigger: GTCAGCTCTCCCCAAATGTCAGTGTGTGTCCCTCTT...GGCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGCAGTTCATTACTGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR GCA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGC +
Preference number: 2 (lower is better)
Translates to: SISGIPVSFNILRPLSLVACLSA*STCSRR
Trigger: GCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGC...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR CCA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGATTGAGTTATCTTTACTaGGCCACAAATAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: STALPDMGICHDTEGQCGLSYLY*ATNSCS
Trigger: GGAGCAGCTATTTGTGGCCCAGTAAAGATAACTCAA...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCWTHCC*CGKRSG
Trigger: GCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCA...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR TCA 90 bp CAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: QQTLNVGQQSLHGGQTISYLVQG*LHYWNL
Trigger: CAAATTCCAATAATGAAGTCACCCTTGGACAAGATA...GCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR TCA 90 bp ATGCTGAATGATCATAAGGAAGATGCCAGTAATGAACTGCTGACACTGATCCTTCATGGGCATATGCCATaGCACAGAAGGTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: MLNDHKEDASNELLTLILHGHMP*HRRSVW
Trigger: CCACACTGACCTTCTGTGTCATGGCATATGCCCATG...AAGGATCAGTGTCAGCAGTTCATTACTGGCATCTTCCTTATGATCATTCAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR CAA 90 bp TTCTCTCTCTCTATAGAGCTCCAGTCGCAGCTCCTTCTTTTCTTGTaGAATCTGCTTCTCCTGGATGCGAGCATTATCCAAAGCAACTTT +
Preference number: 2 (lower is better)
Translates to: FSLSIELQSQLLLFL*NLLLLDASIIQSNF
Trigger: AAAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTCTATAGAGAGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR CAA 90 bp AATTTCTCTCTCTCTATAGAGCTCCAGTCGCAGCTCCTTCTTTTCTaGTTGAATCTGCTTCTCCTGGATGCGAGCATTATCCAAAGCAAC +
Preference number: 2 (lower is better)
Translates to: NFSLSIELQSQLLLF*LNLLLLDASIIQSN
Trigger: GTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTCTATAGAGAGAGAGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR TCA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAACCCTATTCGTGCCTATaGTCAGTTGGAGTTCCGGCA +
Preference number: 2 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEPYSCL*SVGVPA
Trigger: TGCCGGAACTCCAACTGATCATAGGCACGAATAGGG...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp CTTCATTATTGGAATTTGAACTGGTACCTCTTCCATTCTTTCCAAATGATGATCCTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LHYWNLNWYLFHSFQMMILESGL*ICAAAA
Trigger: GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAG...GATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CCA 90 bp GATGCCAGTAATGAACTGCTGACACTGATCCTTGGAGCAATCTCAAAGTTTGCCTTTGAGGCCATTTCCTaGGCAATTCAAGCCAAATGT +
Preference number: 2 (lower is better)
Translates to: DASNELLTLILGAISKFAFEAIS*AIQAKC
Trigger: ACATTTGGCTTGAATTGCCCAGGAAATGGCCTCAAA...GGCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGCAGTTCATTACTGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR CAA 90 bp CCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATaGGAATTTGAACTGGTACCTCTTCCATTCTTTCCAAATGATGAT +
Preference number: 2 (lower is better)
Translates to: PAQESAVSCPRVTSL*EFELVPLPFFPNDD
Trigger: ATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR TCA 90 bp ATGCTGAATGATCATAAGGAAGATGCCAGTAATGAACTGCTGACACTGATCCTTGAGGACCTTTCAGGCTaGATACAACTGTTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: MLNDHKEDASNELLTLILEDLSG*IQLLCH
Trigger: ATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTC...AAGGATCAGTGTCAGCAGTTCATTACTGGCATCTTCCTTATGATCATTCAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGAAGATCATCAGGCTCTaGTTCGGTCCCATTTTGGCT +
Preference number: 2 (lower is better)
Translates to: SISGIPVSFNILRPLSLVKIIRL*FGPILA
Trigger: AGCCAAAATGGGACCGAATCAGAGCCTGATGATCTT...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACATTTGCAGGAGATGCTTaGTGCTTCTGTCACATCAGA +
Preference number: 2 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTFAGDA*CFCHIR
Trigger: TCTGATGTGACAGAAGCACCAAGCATCTCCTGCAAA...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCCCTATTCGTGCCTATaGTCAGTTGGAGTTCCGGCA +
Preference number: 2 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLPYSCL*SVGVPA
Trigger: TGCCGGAACTCCAACTGATCATAGGCACGAATAGGG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000484479.1
3UTR-3UTR TCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACAACCTTCTACAGCCCATaGAGAATACCAGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTTFYSP*RIPESK
Trigger: TTTGGATTCTGGTATTCTTCATGGGCTGTAGAAGGT...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR GCA 90 bp CTTCATTATTGGAATTTGAACTGGTACCTCTTCCATTCTTTCCAAATGATGATCTGGACTGTGAATCTGTaGTGCAGCAGCCATGTTGGC +
Preference number: 2 (lower is better)
Translates to: LHYWNLNWYLFHSFQMMIWTVNL*CSSHVG
Trigger: GCCAACATGGCTGCTGCAGCACAGATTCACAGTCCA...GATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTATTTAAGTGTTTAGAGTaGGTGGCCATTCCGGCAGAA +
Preference number: 2 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVFKCLE*VAIPAE
Trigger: TTCTGCCGGAATGGCCACCCACTCTAAACACTTAAA...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR CAA 90 bp TTCTTTACAAATCAGGAATGTGCTAGTAGAAAGGGGTTAAAGGACTaGCTCCACCATCAACAGTTCAAAGGAAAAACTGGGTGTGGTAAA +
Preference number: 2 (lower is better)
Translates to: FFTNQECASRKGLKD*LHHQQFKGKTGCGK
Trigger: TTTACCACACCCAGTTTTTCCTTTGAACTGTTGATGGTGGAGCAAGTCCTTTAACCCCTTTCTACTAGCACATTCCTGATTTGTAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR CAA 90 bp TGTTCCAACTCCTTTGTGGAGTCTGAGAATATTTACTCTGATGAATaGACCAAATATTTGCTCAGTCCTCCAGTCTACCTCATCCTTTGT +
Preference number: 2 (lower is better)
Translates to: CSNSFVESENIYSDE*TKYLLSPPVYLILC
Trigger: ACAAAGGATGAGGTAGACTGGAGGACTGAGCAAATATTTGGTCAATTCATCAGAGTAAATATTCTCAGACTCCACAAAGGAGTTGGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGAGGACCTTTCAGGCTaGATACAACTGTTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLEDLSG*IQLLCH
Trigger: ATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
3UTR-3UTR TCA 90 bp AATGGAGACTGCATCTTATCTTTATCCCAGGAGGATTCACTTCCACCTGTGTTATATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: NGDCILSLSQEDSLPPVLYLVQG*LHYWNL
Trigger: CAAATTCCAATAATGAAGTCACCCTTGGACAAGATA...TAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTACAGTTAAAAATATTTaGGGCCATTTCCTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCTVKNI*GHFLGN
Trigger: ATTGCCCAGGAAATGGCCTCAAATATTTTTAACTGT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTAGAATGTTACCGAGCTTaGGAACTTAAAAAGAGGGAC +
Preference number: 2 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVECYRA*ELKKRD
Trigger: GTCCCTCTTTTTAAGTTCTCAAGCTCGGTAACATTC...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACAATGCAACACAAACTGTaGACATTACAAACTGGAAAG +
Preference number: 2 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTMQHKL*TLQTGK
Trigger: CTTTCCAGTTTGTAATGTTCACAGTTTGTGTTGCAT...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR TCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTAGTTCAGTCATTATTATaGCTATCCCCTAAAAACCTG +
Preference number: 2 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVVQSLL*LSPKNL
Trigger: CAGGTTTTTAGGGGATAGTCATAATAATGACTGAAC...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CCA 90 bp TGTATACTGCATGAAGGGAGACTAGTTTGGAATATCGTTTCAGCTACAGTGTTTGTAGGAAAAGAAATGTaGATGAATCCGTACAAATCC +
Preference number: 2 (lower is better)
Translates to: CILHEGRLVWNIVSATVFVGKEM*MNPYKS
Trigger: GGATTTGTACGGATTCATCCACATTTCTTTTCCTAC...AAACACTGTAGCTGAAACGATATTCCAAACTAGTCTCCCTTCATGCAGTATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR GCA 90 bp TGTATACTGCATGAAGGGAGACTAGTTTGGAATATCGTTTCAGCTACAGTGTTTGCTGACAGAGTTTATTaGTTTGGGATTTATCAGATA +
Preference number: 2 (lower is better)
Translates to: CILHEGRLVWNIVSATVFADRVY*FGIYQI
Trigger: TATCTGATAAATCCCAAAGCAATAAACTCTGTCAGC...AAACACTGTAGCTGAAACGATATTCCAAACTAGTCTCCCTTCATGCAGTATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CAA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCGGGGCCTGCCGGGTCTaGAACTGTAATTCCAGCTAC +
Preference number: 3 (lower is better)
Translates to: GPGNPAGNACPGVSCILSGACRV*NCNSSY
Trigger: GTAGCTGGAATTACAGTTCAAGACCCGGCAGGCCCC...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR TCA 72 bp GCACCCCCAATGCCTGGCTGGCCAGCTAGGGCTGCATaGGCAATTCCATGTTGGGGTCCAGGTGCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: APPMPGWPARAA*AIPCWGPGAAN
Trigger: ATTTGCTGCACCTGGACCCCAACATGGAATTGCTCATGCAGCCCTAGCTGGCCAGCCAGGCATTGGGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR GCA 72 bp GATGATCCATCTGAGAGGGAGAGCTGGACACACTGCTaGTGGTGTGGGAAGAGGTCTGGCTCCCAGGACGAT +
Preference number: 3 (lower is better)
Translates to: DDPSERESWTHC*WCGKRSGSQDD
Trigger: ATCGTCCTGGGAGCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTCCCTCTCAGATGGATCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR CCA 72 bp GATCCATCTGAGAGGGAGAGCTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGCTCCCAGGACGATGAT +
Preference number: 3 (lower is better)
Translates to: DPSERESWTHCC*CGKRSGSQDDD
Trigger: ATCATCGTCCTGGGAGCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTCCCTCTCAGATGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR GCA 72 bp GGCAGATCCAGTCTATTGGTTAGCAGGTGGTTCTGCTaGAGTGGATTGAGGGTTGGAGCACCCCCAATGCCT +
Preference number: 3 (lower is better)
Translates to: GRSSLLVSRWFC*SGLRVGAPPMP
Trigger: AGGCATTGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGAACCACCTGCTAACCAATAGACTGGATCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR CCA 72 bp AGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATaGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: SLHGGQTISKNE*SRESSGQCLPR
Trigger: CCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR TCA 72 bp ACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAGCGGGCAATGCCTGCC +
Preference number: 3 (lower is better)
Translates to: TESPRRTDYQQK*MVQGIQRAMPA
Trigger: GGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR GCA 72 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGAC +
Preference number: 3 (lower is better)
Translates to: KMNGPGNPAGNA*PGVSCILSKGD
Trigger: GTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR GCA 72 bp AGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGCTTTGATTCAAATTCC +
Preference number: 3 (lower is better)
Translates to: RPLSLVVACLSA*STCSRRFDSNS
Trigger: GGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR CAA 90 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTCTTGCTCCCGGCGCTTaGATTCAAATTCCAAGGCTT +
Preference number: 3 (lower is better)
Translates to: KMNGPGNPAGNACPGVSCLAPGA*IQIPRL
Trigger: AAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAG...ACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR GCA 72 bp TCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCAAATTCCAAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: SLVVACLSACST*SRRFDSNSKAS
Trigger: GGAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR GCA 72 bp AATGGCAGATCCAGTCTATTGGTTAGCAGGTGGTTCTaGTGCAGTGGATTGAGGGTTGGAGCACCCCCAATG +
Preference number: 3 (lower is better)
Translates to: NGRSSLLVSRWF*CSGLRVGAPPM
Trigger: CATTGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGAACCACCTGCTAACCAATAGACTGGATCTGCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CAA 90 bp CAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCGTCACTAGTGGTGGCTaGCTTAAGTGCCTGCTCCAC +
Preference number: 3 (lower is better)
Translates to: QSLHGGQTISKNEWSRESVTSGG*LKCLLH
Trigger: GTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGAC...GGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR CCA 72 bp CATGTAATCCTTCCTTTAGCACAGCACTGCCTGACATaGGCATATGCCATGACACAGAAGGTCAGTGTGGAC +
Preference number: 3 (lower is better)
Translates to: HVILPLAQHCLT*AYAMTQKVSVD
Trigger: GTCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCTAAAGGAAGGATTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CAA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACACGTGCCTATGATCAGTaGGAGTTCCGGCATCAGTGT +
Preference number: 3 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTRAYDQ*EFRHQC
Trigger: ACACTGATGCCGGAACTCCAACTGATCATAGGCACG...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR TCA 72 bp TGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTGAACTGGTACCTCTTC +
Preference number: 3 (lower is better)
Translates to: CLPRSQLYLVQG*LHYWNLNWYLF
Trigger: GAAGAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR TCA 72 bp TTTATAACAGAGGTACCAGCTCTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCCATGTTGGCAATAGTA +
Preference number: 3 (lower is better)
Translates to: FITEVPALESGL*ICAAAAMLAIV
Trigger: TACTATTGCCAACATGGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTGTTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR GCA 72 bp ACAAAAGTCCATGTAATCCTTCCTTTAGCACAGCACTaGCTGACATGGGCATATGCCATGACACAGAAGGTC +
Preference number: 3 (lower is better)
Translates to: TKVHVILPLAQH*LTWAYAMTQKV
Trigger: GACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCTAAAGGAAGGATTACATGGACTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR GCA 72 bp ATTCCATGTTGGGGTCCAGGTGCAGCAAATGGAGACTaGATCTTATCTTTATCCCAGGAGGATTCACTTCCA +
Preference number: 3 (lower is better)
Translates to: IPCWGPGAANGD*ILSLSQEDSLP
Trigger: TGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGACCCCAACATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR CCA 72 bp GATTTGGGGTTTGGGTTAGTCAGACTTATGGAGGGTTaGACTTCATCAGAGGGCAACCAGACATTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: DLGFGLVRLMEG*TSSEGNQTFSQ
Trigger: TTGGGAAAATGTCTGGTTGCCCTCTGATGAAGTCCAACCCTCCATAAGTCTGACTAACCCAAACCCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR TCA 72 bp ACACTCCACACAGGAGATGAACCTCTCCTAATCAGTTaGGTTATCTTTACTGGGCCACAAATAGCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: TLHTGDEPLLIS*VIFTGPQIAAP
Trigger: TGGAGCAGCTATTTGTGGCCCAGTAAAGATAACTCAACTGATTAGGAGAGGTTCATCTCCTGTGTGGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR TCA 72 bp ACACAGAAGGTCAGTGTGGACACTCCACACAGGAGATaGACCTCTCCTAATCAGTTGAGTTATCTTTACTGG +
Preference number: 3 (lower is better)
Translates to: TQKVSVDTPHRR*TSPNQLSYLYW
Trigger: CCAGTAAAGATAACTCAACTGATTAGGAGAGGTTCATCTCCTGTGTGGAGTGTCCACACTGACCTTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTGGTTCATCTGATTCATaGCCATGGCAACTGATGCAG +
Preference number: 3 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCGSSDS*PWQLMQ
Trigger: CTGCATCAGTTGCCATGGCAATGAATCAGATGAACC...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
3UTR-3UTR CAA 90 bp ACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATAGGGTGACTTCATTATaGGAATTTGAACTGGTACCT +
Preference number: 3 (lower is better)
Translates to: TLNVGQQSLHGGQTISKNRVTSL*EFELVP
Trigger: AGGTACCAGTTCAAATTCCAATAATGAAGTCACCCT...ATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR CAA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGGAGTCAGCTGTATCTaGTCCAAGGGTGACTTCATT +
Preference number: 3 (lower is better)
Translates to: SISGIPVSFNILRPLSLVGVSCI*SKGDFI
Trigger: AATGAAGTCACCCTTGGACAAGATACAGCTGACTCC...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR CAA 90 bp TGTATACTGCATGAAGGGAGACTAGTTTGGAATATCGTTTCAGCTACAGTGTTTCAGACTTATGGAGGGTaGGACTTCATCAGAGGGCAA +
Preference number: 3 (lower is better)
Translates to: CILHEGRLVWNIVSATVFQTYGG*DFIRGQ
Trigger: TTGCCCTCTGATGAAGTCCAACCCTCCATAAGTCTG...AAACACTGTAGCTGAAACGATATTCCAAACTAGTCTCCCTTCATGCAGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCGTGCCTATGATCAGTaGGAGTTCCGGCATCAGTGT +
Preference number: 3 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRAYDQ*EFRHQC
Trigger: ACACTGATGCCGGAACTCCAACTGATCATAGGCACG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000484479.1
3UTR-3UTR CAA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGCTTCTTCAGGCGCTTTaGCATAGTAGTTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: SISGIPVSFNILRPLSLVLLQAL*HSSSAL
Trigger: CAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAG...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR CAA 90 bp GATGCCAGTAATGAACTGCTGACACTGATCCTTGGAGCAATCTCAAAGTTTGCCTGTTCTTATAAGGGTTaGTTCTTGAGCTCTAAACAG +
Preference number: 3 (lower is better)
Translates to: DASNELLTLILGAISKFACSYKG*FLSSKQ
Trigger: CTGTTTAGAGCTCAAGAACAAACCCTTATAAGAACA...GGCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGCAGTTCATTACTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTAGGGTGACTTCATTATaGGAATTTGAACTGGTACCT +
Preference number: 3 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCRVTSL*EFELVP
Trigger: AGGTACCAGTTCAAATTCCAATAATGAAGTCACCCT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
3UTR-3UTR CAA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACAAGTCTACCTCATCCTTaGTATACACAGCCTAAATGT +
Preference number: 3 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTSLPHP*YTQPKC
Trigger: ACATTTAGGCTGTGTATACAAAGGATGAGGTAGACT...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR GCA 72 bp AGAGACAGAAATATTTGCCCACATCCTTTATGTGTCTaGTTACAAGGCCTATTAGGAATAGTTCCCATAGCT +
Preference number: 3 (lower is better)
Translates to: RDRNICPHPLCV*LQGLLGIVPIA
Trigger: AGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACACATAAAGGATGTGGGCAAATATTTCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR-3UTR CAA 90 bp ATGCTGAATGATCATAAGGAAGATGCCAGTAATGAACTGCTGACACTGATCCTTGGTAAAAAGGGGAATTaGATACATACAAATGTGACC +
Preference number: 3 (lower is better)
Translates to: MLNDHKEDASNELLTLILGKKGN*IHTNVT
Trigger: GGTCACATTTGTATGTATCAAATTCCCCTTTTTACC...AAGGATCAGTGTCAGCAGTTCATTACTGGCATCTTCCTTATGATCATTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR GCA 72 bp TTCATCTGTCAGTTTTCAAAGATCCTTCAAATTTCATaGTATAGCTTCTGTTCTTCTTTCCACAGCACCGGA +
Preference number: 3 (lower is better)
Translates to: FICQFSKILQIS*YSFCSSFHSTG
Trigger: TCCGGTGCTGTGGAAAGAAGAACAGAAGCTATAGCATGAAATTTGAAGGATCTTTGAAAACTGACAGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR TCA 72 bp ATACCTACTCTATATAAGCAGACCTTCTACAGCCCATaGAGAATACCAGAATCCAAATGCTTATGCTTTAGA +
Preference number: 3 (lower is better)
Translates to: IPTLYKQTFYSP*RIPESKCLCFR
Trigger: TCTAAAGCATAAGCATTTGGATTCTGGTATTCTTCATGGGCTGTAGAAGGTCTGCTTATATAGAGTAGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR TCA 72 bp ACACATATTTGGTTACTGTTTTACATGTGCCAATGCTaGATGATCATAAGGAAGATGCCAGTAATGAACTGC +
Preference number: 3 (lower is better)
Translates to: THIWLLFYMCQC*MIIRKMPVMNC
Trigger: GCAGTTCATTACTGGCATCTTCCTTATGATCATTCAGCATTGGCACATGTAAAACAGTAACCAAATATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCGGACGCCGGCGCCGCTaGAAGTTGCAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: GPGNPAGNACPGVSCILSGRRRR*KLQRSL
Trigger: CAGTGATCTCTGCAACTTCCAGCGGCGCCGGCGTCC...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATCGTTGGTGTTGGTGTTaGCCCTGCCGCCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VVACLSACSTCSRRFDSNRWCWC*PCRRLR
Trigger: CCGGAGGCGGCGGCAGGGGCAACACCAACACCAACG...ATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGGCCACCTTCATCCCGTaGATGTCGACCATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GIQRAMPAQESAVSCPRVATFIP*MSTMRH
Trigger: GTGCCGCATGGTCGACATGCACGGGATGAAGGTGGC...CACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp AGAAGGCGGGCATTTTCCTGCAACACTCCCAAAGAACGCTTAGGGGGCCTGCCGCCATGCGGCACTCGTTaGTGTTGGTGTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RRRAFSCNTPKERLGGLPPCGTR*CWCCPC
Trigger: GCAGGGGCAACACCAACACCAACGAGTGCCGCATGG...CGGCAGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCTTACCCCGGGCTGGATaGCCCCCAGCCCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: FNILRPLSLVVACLSACSLPRAG*PPARGG
Trigger: TCCTCCGCGGGCTGGGGGCCATCCAGCCCGGGGTAA...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AGAAGGCGGGCATTTTCCTGCAACACTCCCAAAGAACGCTTAGGGGGCCTGCCGCGCCTCAGCCATCGCTaGAGCTGTTATACCTGTCGG +
Preference number: 4 (lower is better)
Translates to: RRRAFSCNTPKERLGGLPRLSHR*SCYTCR
Trigger: CCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCG...CGGCAGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR GCA 90 bp AGAAGGCGGGCATTTTCCTGCAACACTCCCAAAGAACGCTTAGGGGGCCTGCCGGGTGGCTTGCTTAAGTaGCTGCTCCACTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RRRAFSCNTPKERLGGLPGGLLK*LLHLLP
Trigger: CGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACC...CGGCAGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp GGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGAGGCCTGGGACTGCATaGGTCAGAAGGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: GIQRAMPAQESAVSCPRVRPGTA*VRRRAF
Trigger: AAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCT...CACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GIQRAMPAQESAVSCPRVWTHCC*CGKRSG
Trigger: GCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCA...CACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp CAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCCTGGCGCGCTCTCGCTaGCTCCGAACTGTTCGCAAG +
Preference number: 4 (lower is better)
Translates to: QQTLNVGQQSLHGGQTISLARSR*LRTVRK
Trigger: CTTGCGAACAGTTCGGAGCCAGCGAGAGCGCGCCAG...GCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR CCA 90 bp CTCTCTATAGAGCTCCAGTCGCAGCTCCTTCTTTTCTTGTTGAATCTGCTTCTCCGGTTTACCCCGGGCTaGATGGCCCCCAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LSIELQSQLLLFLLNLLLRFTPG*MAPSPR
Trigger: CCGCGGGCTGGGGGCCATCCAGCCCGGGGTAAACCG...GAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTCTATAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTTGGTGTACACAGTGTaGAAGCCTCCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TVTSGGLLKCLLHLLPALLVYTV*KPPTRC
Trigger: GCACCTGGTGGGAGGCTTGCACACTGTGTACACCAA...AAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCTTGGAGCACCCCCAATaGCTGGCTGGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: FNILRPLSLVVACLSACSLEHPQ*LAGQLG
Trigger: CCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAA...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTGAGAGCTGGACACACTaGTGCTGGTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KMNGPGNPAGNACPGVSCESWTH*CWCGKR
Trigger: CCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTC...ACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp CGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTAGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: RAMPAQESAVSCPRVTSLACLSA*STCSRR
Trigger: GCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGC...TAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp CAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCCCATGCGGCACTCGTTaGTGTTGGTGTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QQTLNVGQQSLHGGQTISPCGTR*CWCCPC
Trigger: GCAGGGGCAACACCAACACCAACGAGTGCCGCATGG...GCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp AGTGTTCATAGCCATAAGCTTCATCTTCTGAAGTTTCATCGCCTCAGCCATCGCTTACCCCGGGCTGGATaGCCCCCAGCCCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SVHSHKLHLLKFHRLSHRLPRAG*PPARGG
Trigger: TCCTCCGCGGGCTGGGGGCCATCCAGCCCGGGGTAA...GCGATGGCTGAGGCGATGAAACTTCAGAAGATGAAGCTTATGGCTATGAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp CTTCCACCTGTGTTAGAATTAAGATCATCAGGCTCTGATTCGGTCCCATTTTGGCGGTTTACCCCGGGCTaGATGGCCCCCAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LPPVLELRSSGSDSVPFWRFTPG*MAPSPR
Trigger: CCGCGGGCTGGGGGCCATCCAGCCCGGGGTAAACCG...CCAAAATGGGACCGAATCAGAGCCTGATGATCTTAATTCTAACACAGGTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR GCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGCGTTGGTGTTGGTGTTaGCCCTGCCGCCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: CEHYPKQLSADPECWSTERWCWC*PCRRLR
Trigger: CCGGAGGCGGCGGCAGGGGCAACACCAACACCAACG...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGGACGCCGGCGCCGCTaGAAGTTGCAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRGRRRR*KLQRSL
Trigger: CAGTGATCTCTGCAACTTCCAGCGGCGCCGGCGTCC...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCGACGAGGGGGCTCTCTaGGAGTCGAGTACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FNILRPLSLVVACLSACSDEGAL*ESSTGV
Trigger: AACCCCTGTACTCGACTCCCAGAGAGCCCCCTCGTC...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp AGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGGCACTCGTTGGTGTTaGTGTTGCCCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RVSTEDRLSAKMNGPGNPGTRWC*CCPCRR
Trigger: GCGGCGGCAGGGGCAACACCAACACCAACGAGTGCC...TGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCGGTTTACCCCGGGCTaGATGGCCCCCAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIRFTPG*MAPSPR
Trigger: CCGCGGGCTGGGGGCCATCCAGCCCGGGGTAAACCG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp CAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAGGCCTGGGACTGCATaGGTCAGAAGGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: QQTLNVGQQSLHGGQTISRPGTA*VRRRAF
Trigger: AAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCT...GCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTACCAGCTCTGGAGAGTaGACTGTGAATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TVTSGGLLKCLLHLLPALTSSGE*TVNLCC
Trigger: GCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGT...AAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGGGCGCCGCTGGAAGTTaGAGAGATCACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GQTISKNEWSRESSGQCLGAAGS*RDHWRC
Trigger: GCATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCC...CAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp CAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCGCCACCTTCATCCCGTaGATGTCGACCATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: QSLHGGQTISKNEWSRESATFIP*MSTMRH
Trigger: GTGCCGCATGGTCGACATGCACGGGATGAAGGTGGC...GGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCCGGAGGATCCGGACCTaGTCAACAGTACACACCACG +
Preference number: 4 (lower is better)
Translates to: FNILRPLSLVVACLSACSRRIRT*STVHTT
Trigger: CGTGGTGTGTACTGTTGAGCAGGTCCGGATCCTCCG...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTGTGAATCTGTGCTaGAGCAGCCATGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GIQRAMPAQESAVSCPRVTVNLC*SSHVGN
Trigger: ATTGCCAACATGGCTGCTGCAGCACAGATTCACAGT...CACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp TCAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGGAGAGCTGGACACACTaGTGCTGGTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SADPECWSTESPRRTDYQESWTH*CWCGKR
Trigger: CCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTC...CTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp CGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTAAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: RAMPAQESAVSCPRVTSLSACST*SRRFDS
Trigger: TGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACT...TAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGACGAGGGGGCTCTCTaGGAGTCGAGTACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TEDRLSAKMNGPGNPAGNDEGAL*ESSTGV
Trigger: AACCCCTGTACTCGACTCCCAGAGAGCCCCCTCGTC...ATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GGTCAGAAGGCGGGCATTTTCCTGCAACACTCCCAAAGAACGCTTAGGGGGCCTCCAGTCTCTTCAGCTTaGTGTACACAGTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: GQKAGIFLQHSQRTLRGPPVSSA*CTQCAS
Trigger: GCTTGCACACTGTGTACACCAAGCTGAAGAGACTGG...AGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTTACCCCGGGCTGGATaGCCCCCAGCCCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAILPRAG*PPARGG
Trigger: TCCTCCGCGGGCTGGGGGCCATCCAGCCCGGGGTAA...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCCAGTGGATTGAGGGTTaGAGCACCCCCAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: FNILRPLSLVVACLSACSQWIEG*STPNAW
Trigger: CCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTG...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp CCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATTCCAAGGCTTCCTGCAATTTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PAPLAPGALIQIPRLPAIWTHCC*CGKRSG
Trigger: GCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCA...AATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp GGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCAGCTAGGGCTGCATaGGCAATTCCATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GQTISKNEWSRESSGQCLPARAA*AIPCWG
Trigger: ACCCCAACATGGAATTGCTCATGCAGCCCTAGCTGG...CAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGTCTGCTGCAGTGGATTaGGGGTTGGAGCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRSAAVD*GLEHPQ
Trigger: TTGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGA...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp CAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAACTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QTLNVGQQSLHGGQTISKLESGL*ICAAAA
Trigger: GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAG...TTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp GGTCAGAAGGCGGGCATTTTCCTGCAACACTCCCAAAGAACGCTTAGGGGGCCTACTTTCAGCAGACCCTaGATGTTGGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: GQKAGIFLQHSQRTLRGPTFSRP*MLVNRV
Trigger: GACTCTGTTGACCAACATTCAGGGTCTGCTGAAAGT...AGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR TCA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGAAAGAGGGACACACACTaGCATTTGGGGAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: STALPDMGICHDTEGQCGKRDTH*HLGRAD
Trigger: GTCAGCTCTCCCCAAATGTCAGTGTGTGTCCCTCTT...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCGTTGGTGTTGGTGTTaGCCCTGCCGCCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIRWCWC*PCRRLR
Trigger: CCGGAGGCGGCGGCAGGGGCAACACCAACACCAACG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGATGGACTGTGAATCTGTaGTGCAGCAGCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: STALPDMGICHDTEGQCGWTVNL*CSSHVG
Trigger: GCCAACATGGCTGCTGCAGCACAGATTCACAGTCCA...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp AGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCACCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: RVSTEDRLSAKMNGPGNPPAGNA*PGVSCI
Trigger: GATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGG...TGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp TTTCTCCTTCTTCAGGCGCTTTTGCATAGTAGTTCTGCTTTGAAGCTCAACTGCGGCACTCGTTGGTGTTaGTGTTGCCCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FLLLQALLHSSSALKLNCGTRWC*CCPCRR
Trigger: GCGGCGGCAGGGGCAACACCAACACCAACGAGTGCC...GCAGTTGAGCTTCAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGTGGACTGTGAATCTGTaGTGCAGCAGCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: GQTISKNEWSRESSGQCLWTVNL*CSSHVG
Trigger: GCCAACATGGCTGCTGCAGCACAGATTCACAGTCCA...CAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACTGGCGCGCTCTCGCTaGCTCCGAACTGTTCGCAAG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKLARSR*LRTVRK
Trigger: CTTGCGAACAGTTCGGAGCCAGCGAGAGCGCGCCAG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCACTCTCGCTCTCTCTaGCGCGCTCTCGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCHSRSL*RALAGS
Trigger: GGAGCCAGCGAGAGCGCGCCAGAGAGAGCGAGAGTG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp AGAAGGCGGGCATTTTCCTGCAACACTCCCAAAGAACGCTTAGGGGGCCTGCCGTCCAGGTGCAGCAAATaGAGACTGCATCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: RRRAFSCNTPKERLGGLPSRCSK*RLHLIF
Trigger: AAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGA...CGGCAGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp CAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAGTGGTTCTGCTGCAGTaGATTGAGGGTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: QTLNVGQQSLHGGQTISKVVLLQ*IEGWST
Trigger: GGTGCTCCAACCCTCAATCCACTGCAGCAGAACCAC...TTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp AGTGTTCATAGCCATAAGCTTCATCTTCTGAAGTTTCATCGCCTCAGCCATCGCTCTGCTGCAGTGGATTaGGGGTTGGAGCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: SVHSHKLHLLKFHRLSHRSAAVD*GLEHPQ
Trigger: TTGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGA...GCGATGGCTGAGGCGATGAAACTTCAGAAGATGAAGCTTATGGCTATGAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR TCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGCTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CEHYPKQLSADPECWSTELESGL*ICAAAA
Trigger: GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAG...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGGCGCCGCTGGAAGTTaGAGAGATCACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: TLNVGQQSLHGGQTISKNGAAGS*RDHWRC
Trigger: GCATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCC...ATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGCGTGCATGTCGACCATaGGGCACTCGTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CEHYPKQLSADPECWSTERACRP*GTRWCW
Trigger: CCAACACCAACGAGTGCCGCATGGTCGACATGCACG...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATAGGCGGGCATTTTCCTaGAACACTCCCAAAGAACGC +
Preference number: 4 (lower is better)
Translates to: TEDRLSAKMNGPGNPAGNRRAFS*NTPKER
Trigger: GCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCT...ATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGCGCCTCAGCCATCGCTaGAGCTGTTATACCTGTCGG +
Preference number: 4 (lower is better)
Translates to: CEHYPKQLSADPECWSTERLSHR*SCYTCR
Trigger: CCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCG...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTTGGAGCACCCCCAATaGCTGGCTGGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCLEHPQ*LAGQLG
Trigger: CCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAA...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ACAGTAATAGTTACCTCCTTGCATAGCAGCACTATCATGAGGAGTCCCATTGTTTTGGAGCACCCCCAATaGCTGGCTGGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: TVIVTSLHSSTIMRSPIVLEHPQ*LAGQLG
Trigger: CCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAA...AACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCGTTAGCAGGTGGTTCTaGTGCAGTGGATTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: FNILRPLSLVVACLSACSVSRWF*CSGLRV
Trigger: AACCCTCAATCCACTGCAGCAGAACCACCTGCTAAC...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATTGGAAGCTGGACACACTGCTaGTGGTGTGGGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NACPGVSCILSKGDFIIGSWTHC*WCGKRS
Trigger: AGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCT...TCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKPAGNA*PGVSCI
Trigger: GATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp ATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAGAATCCAGCGGGCAATaGCTGCCCAGGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IPVSFNILRPLSLVVACLESSGQ*LPRSQL
Trigger: CAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTC...TAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATTGGAAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: NACPGVSCILSKGDFIIGSACST*SRRFDS
Trigger: TGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACT...TCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKACLSA*STCSRR
Trigger: GCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGC...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp ATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: IPVSFNILRPLSLVVACLACLSA*STCSRR
Trigger: GCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGC...TAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp CCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATTCCAAGGCTTCCTGCAATTTCACTAGTGGTGGCTTaGTTAAGTGCCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: PAPLAPGALIQIPRLPAISLVVA*LSACST
Trigger: AGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGA...AATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGACTCTGTCTCTATCGTaGGTCCTCCGGCCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: CEHYPKQLSADPECWSTETLSLS*VLRPSL
Trigger: AAGCGAGGGCCGGAGGACCCACGATAGAGACAGAGT...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR CCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACCATGCGGCACTCGTTaGTGTTGGTGTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKPCGTR*CWCCPC
Trigger: GCAGGGGCAACACCAACACCAACGAGTGCCGCATGG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGAGGCAGATCAGTTCCTaGCCGTCCATCAGGAACGAA +
Preference number: 4 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRRQISS*PSIRNE
Trigger: TTCGTTCCTGATGGACGGCCAGGAACTGATCTGCCT...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCGGTTTACCCCGGGCTaGATGGCCCCCAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRFTPG*MAPSPR
Trigger: CCGCGGGCTGGGGGCCATCCAGCCCGGGGTAAACCG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp ACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTCCAGGTGCAGCAAATaGAGACTGCATCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: TVTSGGLLKCLLHLLPALSRCSK*RLHLIF
Trigger: AAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGA...AAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCCAGAGGTACCAGCTCTaGAGAGTGGACTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: FNILRPLSLVVACLSACSQRYQL*RVDCES
Trigger: AGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTG...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATAGGAGAAGGACTCTCTaGGATCCGCTCCTTTATAAC +
Preference number: 4 (lower is better)
Translates to: VVACLSACSTCSRRFDSNRRRTL*DPLLYN
Trigger: GTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCT...ATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GATGCCAGTAATGAACTGCTGACACTGATCCTTGGAGCAATCTCAAAGTTTGCCTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: DASNELLTLILGAISKFAWTHCC*CGKRSG
Trigger: GCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCA...GGCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGCAGTTCATTACTGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp CGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATGGCTTCCATTTCCCTaGAGAGTGTTCATAGCCATA +
Preference number: 4 (lower is better)
Translates to: RAMPAQESAVSCPRVTSLWLPFP*RVFIAI
Trigger: TATGGCTATGAACACTCTTCAGGGAAATGGAAGCCA...TAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKLESGL*ICAAAA
Trigger: GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR TCA 90 bp CAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAATTGCTCCCGGCGCTTTaGTTCAAATTCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: QTLNVGQQSLHGGQTISKLLPAL*FKFQGF
Trigger: GAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAA...TTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGATCCCCTAAAAACCTGTaGAACCCATTCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: STALPDMGICHDTEGQCGSPKNL*NPFSRT
Trigger: TGTCCTAGAGAATGGGTTTCACAGGTTTTTAGGGGA...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACGTGCATGTCGACCATaGGGCACTCGTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKRACRP*GTRWCW
Trigger: CCAACACCAACGAGTGCCGCATGGTCGACATGCACG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTGCCACCTTCATCCCGTaGATGTCGACCATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCATFIP*MSTMRH
Trigger: GTGCCGCATGGTCGACATGCACGGGATGAAGGTGGC...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACGCCTCAGCCATCGCTaGAGCTGTTATACCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKRLSHR*SCYTCR
Trigger: CCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AATGGAGACTGCATCTTATCTTTATCCCAGGAGGATTCACTTCCACCTGTGTTACCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: NGDCILSLSQEDSLPPVLPAGNA*PGVSCI
Trigger: GATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGG...TAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR GCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGAATCCAGCGGGCAATaGCTGCCCAGGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIESSGQ*LPRSQL
Trigger: CAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGATCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: STALPDMGICHDTEGQCGSASPG*EHYPKQ
Trigger: TTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGA...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp GTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATTCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VVACLSACSTCSRRFDSNSASPG*EHYPKQ
Trigger: TTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGA...ATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAGGTGGCTTGCTTAAGTaGCTGCTCCACTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKGGLLK*LLHLLP
Trigger: CGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACC...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp ATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAGGTGGCTTGCTTAAGTaGCTGCTCCACTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IPVSFNILRPLSLVVACLGGLLK*LLHLLP
Trigger: CGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACC...TAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTGACGAGGGGGCTCTCTaGGAGTCGAGTACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCDEGAL*ESSTGV
Trigger: AACCCCTGTACTCGACTCCCAGAGAGCCCCCTCGTC...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTTACCCCGGGCTGGATaGCCCCCAGCCCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLPRAG*PPARGG
Trigger: TCCTCCGCGGGCTGGGGGCCATCCAGCCCGGGGTAA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACAGTGGATTGAGGGTTaGAGCACCCCCAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKQWIEG*STPNAW
Trigger: CCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp AGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCAGACCCTGAATGTTaGTCAACAGAGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: RVSTEDRLSAKMNGPGNPADPEC*STESPR
Trigger: CCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGC...TGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATAAGATCATCAGGCTCTaGTTCGGTCCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: TEDRLSAKMNGPGNPAGNKIIRL*FGPILA
Trigger: AGCCAAAATGGGACCGAATCAGAGCCTGATGATCTT...ATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTGCTGCAGTGGATTaGGGGTTGGAGCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAISAAVD*GLEHPQ
Trigger: TTGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGA...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp CTCTCTATAGAGCTCCAGTCGCAGCTCCTTCTTTTCTTGTTGAATCTGCTTCTCATGCAGGAGGTAAGCTaGCTGGAAGTAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: LSIELQSQLLLFLLNLLLMQEVS*LEVGDE
Trigger: CTCATCCCCTACTTCCAGTCAGCTTACCTCCTGCAT...GAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTCTATAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATATGCAGGAGGTAAGCTaGCTGGAAGTAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: TLNVGQQSLHGGQTISKNMQEVS*LEVGDE
Trigger: CTCATCCCCTACTTCCAGTCAGCTTACCTCCTGCAT...ATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAILESGL*ICAAAA
Trigger: GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR TCA 90 bp ACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGAGGACCTTTCAGGCTaGATACAACTGTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TEDRLSAKMNGPGNPAGNEDLSG*IQLLCH
Trigger: ATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTC...ATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGGCGCCGCTGGAAGTTaGAGAGATCACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIGAAGS*RDHWRC
Trigger: GCATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCGTTGGTGTTGGTGTTaGCCCTGCCGCCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRWCWC*PCRRLR
Trigger: CCGGAGGCGGCGGCAGGGGCAACACCAACACCAACG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCGGAGGATCCGGACCTaGTCAACAGTACACACCACG +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIRRIRT*STVHTT
Trigger: CGTGGTGTGTACTGTTGAGCAGGTCCGGATCCTCCG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ACAGTAATAGTTACCTCCTTGCATAGCAGCACTATCATGAGGAGTCCCATTGTTCGGAGGATCCGGACCTaGTCAACAGTACACACCACG +
Preference number: 4 (lower is better)
Translates to: TVIVTSLHSSTIMRSPIVRRIRT*STVHTT
Trigger: CGTGGTGTGTACTGTTGAGCAGGTCCGGATCCTCCG...AACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGTTAGCAGGTGGTTCTaGTGCAGTGGATTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: RVSTEDRLSAKMNGPGNPVSRWF*CSGLRV
Trigger: AACCCTCAATCCACTGCAGCAGAACCACCTGCTAAC...TGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp CAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAACTGTGAATCTGTGCTaGAGCAGCCATGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: QTLNVGQQSLHGGQTISKTVNLC*SSHVGN
Trigger: ATTGCCAACATGGCTGCTGCAGCACAGATTCACAGT...TTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAAGCTGGACACACTGCTaGTGGTGTGGGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKSWTHC*WCGKRS
Trigger: AGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCT...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKSACST*SRRFDS
Trigger: TGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACT...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTAGGCCTGGGACTGCATaGGTCAGAAGGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIRPGTA*VRRRAF
Trigger: AAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCAGTGGATTGAGGGTTaGAGCACCCCCAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCQWIEG*STPNAW
Trigger: CCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGCTATTGGTTAGCAGGTaGTTCTGCTGCAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRLLVSR*FCCSGL
Trigger: CAATCCACTGCAGCAGAACCACCTGCTAACCAATAG...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGCAGATCCAGTCTATTaGTTAGCAGGTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRADPVY*LAGGSA
Trigger: AGCAGAACCACCTGCTAACCAATAGACTGGATCTGC...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp CAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCATCAGCAAAAATGAATaGTCCAGGGAATCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QSLHGGQTISKNEWSRESISKNE*SRESSG
Trigger: CCCGCTGGATTCCCTGGACCATTCATTTTTGCTGAT...GGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGGCAGACCCTGAATGTTaGTCAACAGAGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: CEHYPKQLSADPECWSTEADPEC*STESPR
Trigger: CCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGC...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCCAGCTAGGGCTGCATaGGCAATTCCATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCPARAA*AIPCWG
Trigger: ACCCCAACATGGAATTGCTCATGCAGCCCTAGCTGG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTCATGGGCATATGCCATaGCACAGAAGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HQNNDNRYLPPANGQISSHGHMP*HRRSVW
Trigger: CCACACTGACCTTCTGTGTCATGGCATATGCCCATG...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTGTTGGTGTTGCCCCTaGCGCCGCCTCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLCWCCP*RRLRHC
Trigger: ACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp ATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTATGGACTGTGAATCTGTaGTGCAGCAGCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: IPVSFNILRPLSLVVACLWTVNL*CSSHVG
Trigger: GCCAACATGGCTGCTGCAGCACAGATTCACAGTCCA...TAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTAGCTGGACACACTGCTaGTGGTGTGGGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAISWTHC*WCGKRS
Trigger: AGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTACCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVPAGNA*PGVSCI
Trigger: GATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGG...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCACTCTCGCTCTCTCTaGCGCGCTCTCGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFHSRSL*RALAGS
Trigger: GGAGCCAGCGAGAGCGCGCCAGAGAGAGCGAGAGTG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGCACTCGTTGGTGTTaGTGTTGCCCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGTRWC*CCPCRR
Trigger: GCGGCGGCAGGGGCAACACCAACACCAACGAGTGCC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGCACTCGTTGGTGTTaGTGTTGCCCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGTRWC*CCPCRR
Trigger: GCGGCGGCAGGGGCAACACCAACACCAACGAGTGCC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp GGGGTTAAAGGACTTGCTCCACCATCAACAGTTCAAAGGAAAAACTGGGTGTGGATCAGCAAAAATGAATaGTCCAGGGAATCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GVKGLAPPSTVQRKNWVWISKNE*SRESSG
Trigger: CCCGCTGGATTCCCTGGACCATTCATTTTTGCTGAT...CCACACCCAGTTTTTCCTTTGAACTGTTGATGGTGGAGCAAGTCCTTTAACCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp CTCTCTATAGAGCTCCAGTCGCAGCTCCTTCTTTTCTTGTTGAATCTGCTTCTCAAGATCATCAGGCTCTaGTTCGGTCCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSIELQSQLLLFLLNLLLKIIRL*FGPILA
Trigger: AGCCAAAATGGGACCGAATCAGAGCCTGATGATCTT...GAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTCTATAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTATGCAGGAGGTAAGCTaGCTGGAAGTAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIMQEVS*LEVGDE
Trigger: CTCATCCCCTACTTCCAGTCAGCTTACCTCCTGCAT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGGGCCTGCCGGGTCTTaGACTGTTAACAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIGPAGS*TVNSLF
Trigger: AAACAAGCTGTTAACAGTTCAAGACCCGGCAGGCCC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR GCA 90 bp TCTTTTCTTGTTGAATCTGCTTCTCCTGGATGCGAGCATTATCCAAAGCAACTTTTGGTGTACACAGTGTaGAAGCCTCCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFLVESASPGCEHYPKQLLVYTV*KPPTRC
Trigger: GCACCTGGTGGGAGGCTTGCACACTGTGTACACCAA...AAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTAGGCGGGCATTTTCCTaGAACACTCCCAAAGAACGC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCRRAFS*NTPKER
Trigger: GCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTTGGAGCACCCCCAATaGCTGGCTGGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLEHPQ*LAGQLG
Trigger: CCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTTGGAGCACCCCCAATaGCTGGCTGGCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLEHPQ*LAGQLG
Trigger: CCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTAGCAGGTGGTTCTGCTaGAGTGGATTGAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAISRWFC*SGLRVG
Trigger: TCCAACCCTCAATCCACTGCAGCAGAACCACCTGCT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GATGCCAGTAATGAACTGCTGACACTGATCCTTGGAGCAATCTCAAAGTTTGCCACTGTGAATCTGTGCTaGAGCAGCCATGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: DASNELLTLILGAISKFATVNLC*SSHVGN
Trigger: ATTGCCAACATGGCTGCTGCAGCACAGATTCACAGT...GGCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGCAGTTCATTACTGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGGACTGTGAATCTGTaGTGCAGCAGCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCWTVNL*CSSHVG
Trigger: GCCAACATGGCTGCTGCAGCACAGATTCACAGTCCA...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAAGGTGGCTTGCTTAAGTaGCTGCTCCACTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEGGLLK*LLHLLP
Trigger: CGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACC...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTTCACTAGTGGTGGCTTaGTTAAGTGCCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: HQNNDNRYLPPANGQISSSLVVA*LSACST
Trigger: AGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGA...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCTGGCGCGCTCTCGCTaGCTCCGAACTGTTCGCAAG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLARSR*LRTVRK
Trigger: CTTGCGAACAGTTCGGAGCCAGCGAGAGCGCGCCAG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGACGCCGGCGCCGCTaGAAGTTGCAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGRRRR*KLQRSL
Trigger: CAGTGATCTCTGCAACTTCCAGCGGCGCCGGCGTCC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGTTCTGCTGCAGTaGATTGAGGGTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: SISGIPVSFNILRPLSLVVVLLQ*IEGWST
Trigger: GGTGCTCCAACCCTCAATCCACTGCAGCAGAACCAC...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp CTCTCTATAGAGCTCCAGTCGCAGCTCCTTCTTTTCTTGTTGAATCTGCTTCTCCTATTGGTTAGCAGGTaGTTCTGCTGCAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: LSIELQSQLLLFLLNLLLLLVSR*FCCSGL
Trigger: CAATCCACTGCAGCAGAACCACCTGCTAACCAATAG...GAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTCTATAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTACCAGCTCTGGAGAGTaGACTGTGAATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCTSSGE*TVNLCC
Trigger: GCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp AATGGAGACTGCATCTTATCTTTATCCCAGGAGGATTCACTTCCACCTGTGTTAACCAGCTCTGGAGAGTaGACTGTGAATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NGDCILSLSQEDSLPPVLTSSGE*TVNLCC
Trigger: GCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGT...TAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACAGAGGTACCAGCTCTaGAGAGTGGACTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKQRYQL*RVDCES
Trigger: AGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp CTTCCACCTGTGTTAGAATTAAGATCATCAGGCTCTGATTCGGTCCCATTTTGGCAGAGGTACCAGCTCTaGAGAGTGGACTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: LPPVLELRSSGSDSVPFWQRYQL*RVDCES
Trigger: AGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTG...CCAAAATGGGACCGAATCAGAGCCTGATGATCTTAATTCTAACACAGGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTGCAGACCCTGAATGTTaGTCAACAGAGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCADPEC*STESPR
Trigger: CCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGC...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACACAGCACTGCCTGACATaGGCATATGCCATGACACAG +
Preference number: 4 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTQHCLT*AYAMTQ
Trigger: CTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTG...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR CAA 72 bp AGATTTGGGGTTTGGGTTAGTCAGACTTATGGAGGGTaGGACTTCATCAGAGGGCAACCAGACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RFGVWVSQTYGG*DFIRGQPDIFP
Trigger: TGGGAAAATGTCTGGTTGCCCTCTGATGAAGTCCAACCCTCCATAAGTCTGACTAACCCAAACCCCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp TGCGAGCATTATCCAAAGCAACTTTCAGCAGACCCTGAATGTTGGTCAACAGAGTGGCTTCCATTTCCCTaGAGAGTGTTCATAGCCATA +
Preference number: 4 (lower is better)
Translates to: CEHYPKQLSADPECWSTEWLPFP*RVFIAI
Trigger: TATGGCTATGAACACTCTTCAGGGAAATGGAAGCCA...CTCTGTTGACCAACATTCAGGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAACTTTCAGCAGACCCTaGATGTTGGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKTFSRP*MLVNRV
Trigger: GACTCTGTTGACCAACATTCAGGGTCTGCTGAAAGT...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAACTTTCAGCAGACCCTaGATGTTGGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: IPVSFNILRPLSLVVACLTFSRP*MLVNRV
Trigger: GACTCTGTTGACCAACATTCAGGGTCTGCTGAAAGT...TAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTTGCTCCCGGCGCTTTaGTTCAAATTCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAILLPAL*FKFQGF
Trigger: GAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAA...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR TCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACATTGCTCCCGGCGCTTTaGTTCAAATTCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTLLPAL*FKFQGF
Trigger: GAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAA...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GGGGTTAAAGGACTTGCTCCACCATCAACAGTTCAAAGGAAAAACTGGGTGTGGATGCTAGGGCAGACGTaGAAACAACACAATGGATTA +
Preference number: 4 (lower is better)
Translates to: GVKGLAPPSTVQRKNWVWMLGQT*KQHNGL
Trigger: TAATCCATTGTGTTGTTTTCACGTCTGCCCTAGCAT...CCACACCCAGTTTTTCCTTTGAACTGTTGATGGTGGAGCAAGTCCTTTAACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GATGCCAGTAATGAACTGCTGACACTGATCCTTGGAGCAATCTCAAAGTTTGCCCCTCTCCTAATCAGTTaGGTTATCTTTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: DASNELLTLILGAISKFAPLLIS*VIFTGP
Trigger: TGGCCCAGTAAAGATAACTCAACTGATTAGGAGAGG...GGCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGCAGTTCATTACTGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAACTCCACACAGGAGATaGACCTCTCCTAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKTPHRR*TSPNQL
Trigger: CAACTGATTAGGAGAGGTTCATCTCCTGTGTGGAGT...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GGGGTTAAAGGACTTGCTCCACCATCAACAGTTCAAAGGAAAAACTGGGTGTGGGAATGTTACCGAGCTTaGGAACTTAAAAAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GVKGLAPPSTVQRKNWVWECYRA*ELKKRD
Trigger: GTCCCTCTTTTTAAGTTCTCAAGCTCGGTAACATTC...CCACACCCAGTTTTTCCTTTGAACTGTTGATGGTGGAGCAAGTCCTTTAACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGGCCTGCCGGGTCTTaGACTTCCACTGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGPAGS*TSTALA
Trigger: AGCCAAAGCAGTGGAAGTTCAAGACCCGGCAGGCCC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510272.5
CDS-3UTR GCA 90 bp TCTGCTTTGAAGCTCAACTGCAAGTTGTCTTTCAAGGTTTTCTCTAATTTCTCTCGTGCATGTCGACCATaGGGCACTCGTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SALKLNCKLSFKVFSNFSRACRP*GTRWCW
Trigger: CCAACACCAACGAGTGCCGCATGGTCGACATGCACG...AGAGAAATTAGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGCCACCTTCATCCCGTaGATGTCGACCATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFATFIP*MSTMRH
Trigger: GTGCCGCATGGTCGACATGCACGGGATGAAGGTGGC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp TCTTTTCTTGTTGAATCTGCTTCTCCTGGATGCGAGCATTATCCAAAGCAACTTAGCAGGTGGTTCTGCTaGAGTGGATTGAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SFLVESASPGCEHYPKQLSRWFC*SGLRVG
Trigger: TCCAACCCTCAATCCACTGCAGCAGAACCACCTGCT...AAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTGTTAGCAGGTGGTTCTaGTGCAGTGGATTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCVSRWF*CSGLRV
Trigger: AACCCTCAATCCACTGCAGCAGAACCACCTGCTAAC...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFPAGNA*PGVSCI
Trigger: GATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCCAGCGGGCAATGCCTaGCCAGGAGTCAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLPAGNA*PGVSCI
Trigger: GATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGAATCCAGCGGGCAATaGCTGCCCAGGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLESSGQ*LPRSQL
Trigger: CAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGAATCCAGCGGGCAATaGCTGCCCAGGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFESSGQ*LPRSQL
Trigger: CAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTAAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVSACST*SRRFDS
Trigger: TGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACT...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLACLSA*STCSRR
Trigger: GCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGCTTGCTTAAGTGCCTaGTCCACTTGCTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFACLSA*STCSRR
Trigger: GCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTCACTAGTGGTGGCTTaGTTAAGTGCCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCSLVVA*LSACST
Trigger: AGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGA...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTATGCGGAGACAGCCATaGTCACTCTGTCTCTATCGT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIMRRQP*SLCLYR
Trigger: ACGATAGAGACAGAGTGACCATGGCTGTCTCCGCAT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTAGTTGCAGAGATCACTaGAGATGCGGAGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCSCRDH*RCGDSH
Trigger: ATGGCTGTCTCCGCATCTCCAGTGATCTCTGCAACT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGACGAGGGGGCTCTCTaGGAGTCGAGTACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLDEGAL*ESSTGV
Trigger: AACCCCTGTACTCGACTCCCAGAGAGCCCCCTCGTC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCCATGCGGCACTCGTTaGTGTTGGTGTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFPCGTR*CWCCPC
Trigger: GCAGGGGCAACACCAACACCAACGAGTGCCGCATGG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCCAGTCTCTTCAGCTTaGTGTACACAGTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIPVSSA*CTQCAS
Trigger: GCTTGCACACTGTGTACACCAAGCTGAAGAGACTGG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAGCAGATCCAGTCTATTaGTTAGCAGGTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKADPVY*LAGGSA
Trigger: AGCAGAACCACCTGCTAACCAATAGACTGGATCTGC...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp CTTCCACCTGTGTTAGAATTAAGATCATCAGGCTCTGATTCGGTCCCATTTTGGGCAGATCCAGTCTATTaGTTAGCAGGTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPPVLELRSSGSDSVPFWADPVY*LAGGSA
Trigger: AGCAGAACCACCTGCTAACCAATAGACTGGATCTGC...CCAAAATGGGACCGAATCAGAGCCTGATGATCTTAATTCTAACACAGGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp ACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATTCTGATTCATTGCCATaGCAACTGATGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TLNVGQQSLHGGQTISKNSDSLP*QLMQEV
Trigger: TACCTCCTGCATCAGTTGCCATGGCAATGAATCAGA...ATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAAGGAGAAGGACTCTCTaGGATCCGCTCCTTTATAAC +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKRRRTL*DPLLYN
Trigger: GTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCT...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTGTGCCTATGATCAGTTaGAGTTCCGGCATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: HQNNDNRYLPPANGQISSVPMIS*SSGISV
Trigger: AACACTGATGCCGGAACTCCAACTGATCATAGGCAC...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTCTGCTGCAGTGGATTaGGGGTTGGAGCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSAAVD*GLEHPQ
Trigger: TTGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTCTGCTGCAGTGGATTaGGGGTTGGAGCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSAAVD*GLEHPQ
Trigger: TTGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLESGL*ICAAAA
Trigger: GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCTGGAGAGTGGACTGTaGATCTGTGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLESGL*ICAAAA
Trigger: GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATATAGCAGCACTATCATaGGGAGTCCCATTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TLNVGQQSLHGGQTISKNIAALS*GVPLFS
Trigger: AGAAAACAATGGGACTCCTCATGATAGTGCTGCTAT...ATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTGAGGACCTTTCAGGCTaGATACAACTGTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCEDLSG*IQLLCH
Trigger: ATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTC...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCAGCACCGGAGACATTaGAGACTGATAAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIQHRRH*RLIKAL
Trigger: AAGAGCCTTTATCAGTCTTCAATGTCTCCGGTGCTG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGCGCCGCTGGAAGTTaGAGAGATCACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGAAGS*RDHWRC
Trigger: GCATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCGTGCATGTCGACCATaGGGCACTCGTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRACRP*GTRWCW
Trigger: CCAACACCAACGAGTGCCGCATGGTCGACATGCACG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCGGAGGATCCGGACCTaGTCAACAGTACACACCACG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRRIRT*STVHTT
Trigger: CGTGGTGTGTACTGTTGAGCAGGTCCGGATCCTCCG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCGCCTCAGCCATCGCTaGAGCTGTTATACCTGTCGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRLSHR*SCYTCR
Trigger: CCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCGCCTCAGCCATCGCTaGAGCTGTTATACCTGTCGG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRLSHR*SCYTCR
Trigger: CCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGAGAGCTGGACACACTaGTGCTGGTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFESWTH*CWCGKR
Trigger: CCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGAGAGCTGGACACACTaGTGCTGGTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLESWTH*CWCGKR
Trigger: CCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAATCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKSASPG*EHYPKQ
Trigger: TTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGA...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGTGGCTTGCTTAAGTaGCTGCTCCACTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGGLLK*LLHLLP
Trigger: CGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGTGGCTTGCTTAAGTaGCTGCTCCACTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGGLLK*LLHLLP
Trigger: CGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGTCACTAGTGGTGGCTTaGTTAAGTGCCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: SISGIPVSFNILRPLSLVSLVVA*LSACST
Trigger: AGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGA...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACAATGATAACAGGTATCTaGCCCCAGCCAATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTMITGI*PQPMVR
Trigger: TCTGACCATTGGCTGGGGGCAGATACCTGTTATCAT...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATCCTTTAGCACAGCACTaGCTGACATGGGCATATGCC +
Preference number: 4 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYPLAQH*LTWAYA
Trigger: GGCATATGCCCATGTCAGGCAGTGCTGTGCTAAAGG...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTACTCTGTCTCTATCGTaGGTCCTCCGGCCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFTLSLS*VLRPSL
Trigger: AAGCGAGGGCCGGAGGACCCACGATAGAGACAGAGT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGATGCGGAGACAGCCATaGTCACTCTGTCTCTATCGT +
Preference number: 4 (lower is better)
Translates to: SISGIPVSFNILRPLSLVMRRQP*SLCLYR
Trigger: ACGATAGAGACAGAGTGACCATGGCTGTCTCCGCAT...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR CCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACCGGCACTGTTGCTGTaGTTATTAACCACGAAACTA +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKPALLL*LLTTKL
Trigger: TAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTACCGGCACTGTTGCTGTaGTTATTAACCACGAAACTA +
Preference number: 4 (lower is better)
Translates to: IPVSFNILRPLSLVVACLPALLL*LLTTKL
Trigger: TAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGG...TAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGGCCTGGGACTGCATaGGTCAGAAGGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRPGTA*VRRRAF
Trigger: AAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGGCCTGGGACTGCATaGGTCAGAAGGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRPGTA*VRRRAF
Trigger: AAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCAGTGGATTGAGGGTTaGAGCACCCCCAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLQWIEG*STPNAW
Trigger: CCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCAGTGGATTGAGGGTTaGAGCACCCCCAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFQWIEG*STPNAW
Trigger: CCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATACCAGCTCTGGAGAGTaGACTGTGAATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYTSSGE*TVNLCC
Trigger: GCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGT...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTAGGAGAAGGACTCTCTaGGATCCGCTCCTTTATAAC +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIRRRTL*DPLLYN
Trigger: GTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTAGGAGAAGGACTCTCTaGGATCCGCTCCTTTATAAC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCRRRTL*DPLLYN
Trigger: GTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFWTHCC*CGKRSG
Trigger: GCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTGGACACACTGCTGCTaGTGTGGGAAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLWTHCC*CGKRSG
Trigger: GCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGTGCCTATGATCAGTTaGAGTTCCGGCATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIVPMIS*SSGISV
Trigger: AACACTGATGCCGGAACTCCAACTGATCATAGGCAC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000484479.1
CDS-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTATAAGCTTCATCTTCTaGAGTTTCATCGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCISFIF*SFIASA
Trigger: GGCTGAGGCGATGAAACTTCAGAAGATGAAGCTTAT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ACAGTAATAGTTACCTCCTTGCATAGCAGCACTATCATGAGGAGTCCCATTGTTATAAGCTTCATCTTCTaGAGTTTCATCGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TVIVTSLHSSTIMRSPIVISFIF*SFIASA
Trigger: GGCTGAGGCGATGAAACTTCAGAAGATGAAGCTTAT...AACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTGGCTTCCATTTCCCTaGAGAGTGTTCATAGCCATA +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIWLPFP*RVFIAI
Trigger: TATGGCTATGAACACTCTTCAGGGAAATGGAAGCCA...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCCAGCTAGGGCTGCATaGGCAATTCCATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLPARAA*AIPCWG
Trigger: ACCCCAACATGGAATTGCTCATGCAGCCCTAGCTGG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCCAGCTAGGGCTGCATaGGCAATTCCATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFPARAA*AIPCWG
Trigger: ACCCCAACATGGAATTGCTCATGCAGCCCTAGCTGG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp TTTCTCCTTCTTCAGGCGCTTTTGCATAGTAGTTCTGCTTTGAAGCTCAACTGCATAGCAGCACTATCATaGGGAGTCCCATTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FLLLQALLHSSSALKLNCIAALS*GVPLFS
Trigger: AGAAAACAATGGGACTCCTCATGATAGTGCTGCTAT...GCAGTTGAGCTTCAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACAACATTTGGGGAGAGCTaGCAGAGTTTATTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTTFGES*QSLLLW
Trigger: CCAAAGCAATAAACTCTGTCAGCTCTCCCCAAATGT...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAACTGTGTATACTGCATaGAGGGAGACTAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKTVYTA*RETSLE
Trigger: TTCCAAACTAGTCTCCCTTCATGCAGTATACACAGT...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTAAAAGATCAAAGACTTaGGGCAGGCAGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCKRSKT*GRQISS
Trigger: GGAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ACAGTAATAGTTACCTCCTTGCATAGCAGCACTATCATGAGGAGTCCCATTGTTAAAAGATCAAAGACTTaGGGCAGGCAGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TVIVTSLHSSTIMRSPIVKRSKT*GRQISS
Trigger: GGAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTT...AACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTTGGTGTACACAGTGTaGAAGCCTCCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLVYTV*KPPTRC
Trigger: GCACCTGGTGGGAGGCTTGCACACTGTGTACACCAA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTTGGTGTACACAGTGTaGAAGCCTCCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLVYTV*KPPTRC
Trigger: GCACCTGGTGGGAGGCTTGCACACTGTGTACACCAA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGCTGGACACACTGCTaGTGGTGTGGGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSWTHC*WCGKRS
Trigger: AGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGCTGGACACACTGCTaGTGGTGTGGGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSWTHC*WCGKRS
Trigger: AGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGAATTCCAAGGCTTCCTaGAATTTTCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRNSKAS*NFLLVF
Trigger: AAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATT...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSACST*SRRFDS
Trigger: TGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGTGCCTGCTCCACTTaGTCCCGGCGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSACST*SRRFDS
Trigger: TGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp TGTATACTGCATGAAGGGAGACTAGTTTGGAATATCGTTTCAGCTACAGTGTTTCCTGACATGGGCATATaGCATGACACAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CILHEGRLVWNIVSATVFPDMGI*HDTEGQ
Trigger: CTGACCTTCTGTGTCATGGCATATGCCCATGTCAGG...AAACACTGTAGCTGAAACGATATTCCAAACTAGTCTCCCTTCATGCAGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp TCTGCTTTGAAGCTCAACTGCAAGTTGTCTTTCAAGGTTTTCTCTAATTTCTCTAGGCAGATCAGTTCCTaGCCGTCCATCAGGAACGAA +
Preference number: 4 (lower is better)
Translates to: SALKLNCKLSFKVFSNFSRQISS*PSIRNE
Trigger: TTCGTTCCTGATGGACGGCCAGGAACTGATCTGCCT...AGAGAAATTAGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGTGGTTCTGCTGCAGTaGATTGAGGGTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLVVLLQ*IEGWST
Trigger: GGTGCTCCAACCCTCAATCCACTGCAGCAGAACCAC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGTGGTTCTGCTGCAGTaGATTGAGGGTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFVVLLQ*IEGWST
Trigger: GGTGCTCCAACCCTCAATCCACTGCAGCAGAACCAC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATTATTGGAATTTGAACTaGTACCTCTTCCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: TEDRLSAKMNGPGNPAGNYWNLN*YLFHSF
Trigger: GAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATA...ATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTTTTGAGGCCATTTCCTaGGCAATTCAAGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: HQNNDNRYLPPANGQISSFEAIS*AIQAKC
Trigger: ACATTTGGCTTGAATTGCCCAGGAAATGGCCTCAAA...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTTTAAGTGTTTAGAGTaGGTGGCCATTCCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCFKCLE*VAIPAE
Trigger: TTCTGCCGGAATGGCCACCCACTCTAAACACTTAAA...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GGGGTTAAAGGACTTGCTCCACCATCAACAGTTCAAAGGAAAAACTGGGTGTGGGTGAACATTACAAACTaGAAAGCAATAGCACACACT +
Preference number: 4 (lower is better)
Translates to: GVKGLAPPSTVQRKNWVWVNITN*KAIAHT
Trigger: AGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTCAC...CCACACCCAGTTTTTCCTTTGAACTGTTGATGGTGGAGCAAGTCCTTTAACCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGCTCCCACCAGGTGCTTaGGAAAAAGATCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: SISGIPVSFNILRPLSLVLPPGA*EKDQRL
Trigger: AAGTCTTTGATCTTTTTCTCAAGCACCTGGTGGGAG...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCATTGGTGCAATCGGTaGACAAAGTTTCGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCHWCNR*TKFRSL
Trigger: AAGACTTCGAAACTTTGTTCACCGATTGCACCAATG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGATGCAGGAGGTAAGCTaGCTGGAAGTAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLMQEVS*LEVGDE
Trigger: CTCATCCCCTACTTCCAGTCAGCTTACCTCCTGCAT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTATGCAGGAGGTAAGCTaGCTGGAAGTAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFMQEVS*LEVGDE
Trigger: CTCATCCCCTACTTCCAGTCAGCTTACCTCCTGCAT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTATAGCAGCACTATCATaGGGAGTCCCATTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIIAALS*GVPLFS
Trigger: AGAAAACAATGGGACTCCTCATGATAGTGCTGCTAT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGGCCTGCCGGGTCTTaGACTGTTAACAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGPAGS*TVNSLF
Trigger: AAACAAGCTGTTAACAGTTCAAGACCCGGCAGGCCC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000461604.6
ENST00000508860.5
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGGCCTGCCGGGTCTTaGACTGTTAACAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGPAGS*TVNSLF
Trigger: AAACAAGCTGTTAACAGTTCAAGACCCGGCAGGCCC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000461604.6
ENST00000508860.5
CDS-3UTR TCA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTGAAATATTGTTGACCTaGATGTTGGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: HQNNDNRYLPPANGQISSEILLT*MLVNRV
Trigger: GACTCTGTTGACCAACATTCAGGTCAACAATATTTC...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTACCTTCTACAGCCCATaGAGAATACCAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCTFYSP*RIPESK
Trigger: TTTGGATTCTGGTATTCTTCATGGGCTGTAGAAGGT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGGCGGGCATTTTCCTaGAACACTCCCAAAGAACGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRRAFS*NTPKER
Trigger: GCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGGCGGGCATTTTCCTaGAACACTCCCAAAGAACGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRRAFS*NTPKER
Trigger: GCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGCAGGTGGTTCTGCTaGAGTGGATTGAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSRWFC*SGLRVG
Trigger: TCCAACCCTCAATCCACTGCAGCAGAACCACCTGCT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGCAGGTGGTTCTGCTaGAGTGGATTGAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSRWFC*SGLRVG
Trigger: TCCAACCCTCAATCCACTGCAGCAGAACCACCTGCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTGGACTGTGAATCTGTaGTGCAGCAGCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFWTVNL*CSSHVG
Trigger: GCCAACATGGCTGCTGCAGCACAGATTCACAGTCCA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTGGACTGTGAATCTGTaGTGCAGCAGCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLWTVNL*CSSHVG
Trigger: GCCAACATGGCTGCTGCAGCACAGATTCACAGTCCA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGGCAGATCAGTTCCTaGCCGTCCATCAGGAACGAA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRQISS*PSIRNE
Trigger: TTCGTTCCTGATGGACGGCCAGGAACTGATCTGCCT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTCCAGGTGCAGCAAATaGAGACTGCATCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCSRCSK*RLHLIF
Trigger: AAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGA...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTACCAGCTCTGGAGAGTaGACTGTGAATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFTSSGE*TVNLCC
Trigger: GCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGACCAGCTCTGGAGAGTaGACTGTGAATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLTSSGE*TVNLCC
Trigger: GCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGCAGACCCTGAATGTTaGTCAACAGAGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLADPEC*STESPR
Trigger: CCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGCAGACCCTGAATGTTaGTCAACAGAGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFADPEC*STESPR
Trigger: CCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTAAAGAGGAAGCAAGATTaGGGATGGGAGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVKRKQD*GWEERR
Trigger: TCTTCTCTCCTCCCATCCCCAATCTTGCTTCCTCTT...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GATGCCAGTAATGAACTGCTGACACTGATCCTTGGAGCAATCTCAAAGTTTGCCAAAAGATTTGGGGTTTaGGTTAGTCAGACTTATGGA +
Preference number: 4 (lower is better)
Translates to: DASNELLTLILGAISKFAKRFGV*VSQTYG
Trigger: TCCATAAGTCTGACTAACCCAAACCCCAAATCTTTT...GGCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGCAGTTCATTACTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAATATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKYLVQG*LHYWNL
Trigger: CAAATTCCAATAATGAAGTCACCCTTGGACAAGATA...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR TCA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: HQNNDNRYLPPANGQISSYLVQG*LHYWNL
Trigger: CAAATTCCAATAATGAAGTCACCCTTGGACAAGATA...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp TTTCTCCTTCTTCAGGCGCTTTTGCATAGTAGTTCTGCTTTGAAGCTCAACTGCTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: FLLLQALLHSSSALKLNCYLVQG*LHYWNL
Trigger: CAAATTCCAATAATGAAGTCACCCTTGGACAAGATA...GCAGTTGAGCTTCAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR TCA 90 bp TGTATACTGCATGAAGGGAGACTAGTTTGGAATATCGTTTCAGCTACAGTGTTTGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: CILHEGRLVWNIVSATVFDYQQK*MVQGIQ
Trigger: CTGGATTCCCTGGACCATTCATTTTTGCTGATAGTC...AAACACTGTAGCTGAAACGATATTCCAAACTAGTCTCCCTTCATGCAGTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTTGCTCCCGGCGCTTTaGTTCAAATTCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLLPAL*FKFQGF
Trigger: GAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp CTTCATTATTGGAATTTGAACTGGTACCTCTTCCATTCTTTCCAAATGATGATCTTGCTCCCGGCGCTTTaGTTCAAATTCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LHYWNLNWYLFHSFQMMILLPAL*FKFQGF
Trigger: GAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAA...GATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTTGCTCCCGGCGCTTTaGTTCAAATTCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLLPAL*FKFQGF
Trigger: GAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAGTTCAGTCATTATTATaGCTATCCCCTAAAAACCTG +
Preference number: 4 (lower is better)
Translates to: VKPARTFQAEYNCCAISKVQSLL*LSPKNL
Trigger: CAGGTTTTTAGGGGATAGTCATAATAATGACTGAAC...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTTATAAGGTATCATGGTaGGTGGCAGAATTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: HQNNDNRYLPPANGQISSYKVSW*VAEFSR
Trigger: TCTAGAAAATTCTGCCACTCACCATGATACCTTATA...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTTCAGGAACCTAAAATaGTCTGATGTAACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCFRNLK*SDVTGS
Trigger: TGAGCCTGTTACATCAGATCATTTTAGGTTCCTGAA...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp CATAGTAGTTCTGCTTTGAAGCTCAACTGCAAGTTGTCTTTCAAGGTTTTCTCTAAAAGATCAAAGACTTaGGGCAGGCAGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HSSSALKLNCKLSFKVFSKRSKT*GRQISS
Trigger: GGAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTT...AGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGAACTACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGTTAGCAGGTGGTTCTaGTGCAGTGGATTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFVSRWF*CSGLRV
Trigger: AACCCTCAATCCACTGCAGCAGAACCACCTGCTAAC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGTTAGCAGGTGGTTCTaGTGCAGTGGATTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLVSRWF*CSGLRV
Trigger: AACCCTCAATCCACTGCAGCAGAACCACCTGCTAAC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTCACTAGTGGTGGCTTaGTTAAGTGCCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSLVVA*LSACST
Trigger: AGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTCACTAGTGGTGGCTTaGTTAAGTGCCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSLVVA*LSACST
Trigger: AGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGATGCGGAGACAGCCATaGTCACTCTGTCTCTATCGT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLMRRQP*SLCLYR
Trigger: ACGATAGAGACAGAGTGACCATGGCTGTCTCCGCAT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGTTGCAGAGATCACTaGAGATGCGGAGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSCRDH*RCGDSH
Trigger: ATGGCTGTCTCCGCATCTCCAGTGATCTCTGCAACT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp CTTCATTATTGGAATTTGAACTGGTACCTCTTCCATTCTTTCCAAATGATGATCAGTTGCAGAGATCACTaGAGATGCGGAGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LHYWNLNWYLFHSFQMMISCRDH*RCGDSH
Trigger: ATGGCTGTCTCCGCATCTCCAGTGATCTCTGCAACT...GATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp CATAGTAGTTCTGCTTTGAAGCTCAACTGCAAGTTGTCTTTCAAGGTTTTCTCTCCGGCACTGTTGCTGTaGTTATTAACCACGAAACTA +
Preference number: 4 (lower is better)
Translates to: HSSSALKLNCKLSFKVFSPALLL*LLTTKL
Trigger: TAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGG...AGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGAACTACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCCAGTCTCTTCAGCTTaGTGTACACAGTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFPVSSA*CTQCAS
Trigger: GCTTGCACACTGTGTACACCAAGCTGAAGAGACTGG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCAGAGGTACCAGCTCTaGAGAGTGGACTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLQRYQL*RVDCES
Trigger: AGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCAGAGGTACCAGCTCTaGAGAGTGGACTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFQRYQL*RVDCES
Trigger: AGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTATTTGCAGGAGATGCTTaGTGCTTCTGTCACATCAGA +
Preference number: 4 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVFAGDA*CFCHIR
Trigger: TCTGATGTGACAGAAGCACCAAGCATCTCCTGCAAA...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp ATGCTGAATGATCATAAGGAAGATGCCAGTAATGAACTGCTGACACTGATCCTTTTGAGTTATCTTTACTaGGCCACAAATAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MLNDHKEDASNELLTLILLSYLY*ATNSCS
Trigger: GGAGCAGCTATTTGTGGCCCAGTAAAGATAACTCAA...AAGGATCAGTGTCAGCAGTTCATTACTGGCATCTTCCTTATGATCATTCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATGCTGACACTGATCCTTaGAGCAATCTCAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYADTDP*SNLKVC
Trigger: GCAAACTTTGAGATTGCTCCAAGGATCAGTGTCAGC...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAAGAAATACCATCCCTGTaGTTTACCAAAACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEEIPSL*FTKTGG
Trigger: TCCCCCTGTTTTGGTAAACCACAGGGATGGTATTTC...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAAGATCATCAGGCTCTaGTTCGGTCCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFKIIRL*FGPILA
Trigger: AGCCAAAATGGGACCGAATCAGAGCCTGATGATCTT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAAGATCATCAGGCTCTaGTTCGGTCCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLKIIRL*FGPILA
Trigger: AGCCAAAATGGGACCGAATCAGAGCCTGATGATCTT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTACTTTCAGCAGACCCTaGATGTTGGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFTFSRP*MLVNRV
Trigger: GACTCTGTTGACCAACATTCAGGGTCTGCTGAAAGT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGACTTTCAGCAGACCCTaGATGTTGGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLTFSRP*MLVNRV
Trigger: GACTCTGTTGACCAACATTCAGGGTCTGCTGAAAGT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAAATAGCAGCACTATCATaGGGAGTCCCATTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEIAALS*GVPLFS
Trigger: AGAAAACAATGGGACTCCTCATGATAGTGCTGCTAT...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGAGGACCTTTCAGGCTaGATACAACTGTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFEDLSG*IQLLCH
Trigger: ATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCTCTTTGACATGAAATaGCAGTCATTTTACCAGGAT +
Preference number: 4 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCLFDMK*QSFYQD
Trigger: ATCCTGGTAAAATGACTGTCATTTCATGTCAAAGAG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGACTGTGAATCTGTGCTaGAGCAGCCATGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLTVNLC*SSHVGN
Trigger: ATTGCCAACATGGCTGCTGCAGCACAGATTCACAGT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTACTGTGAATCTGTGCTaGAGCAGCCATGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFTVNLC*SSHVGN
Trigger: ATTGCCAACATGGCTGCTGCAGCACAGATTCACAGT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCTATTGGTTAGCAGGTaGTTCTGCTGCAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLLVSR*FCCSGL
Trigger: CAATCCACTGCAGCAGAACCACCTGCTAACCAATAG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCTATTGGTTAGCAGGTaGTTCTGCTGCAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLLVSR*FCCSGL
Trigger: CAATCCACTGCAGCAGAACCACCTGCTAACCAATAG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGCAGATCCAGTCTATTaGTTAGCAGGTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFADPVY*LAGGSA
Trigger: AGCAGAACCACCTGCTAACCAATAGACTGGATCTGC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGCAGATCCAGTCTATTaGTTAGCAGGTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLADPVY*LAGGSA
Trigger: AGCAGAACCACCTGCTAACCAATAGACTGGATCTGC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAGGAGAAGGACTCTCTaGGATCCGCTCCTTTATAAC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRRRTL*DPLLYN
Trigger: GTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGGAGAAGGACTCTCTaGGATCCGCTCCTTTATAAC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRRRTL*DPLLYN
Trigger: GTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTATCAGCAAAAATGAATaGTCCAGGGAATCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFISKNE*SRESSG
Trigger: CCCGCTGGATTCCCTGGACCATTCATTTTTGCTGAT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGTTCCAACTCCTTTGTaGAGTCTGAGAATATTTACT +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIVPTPL*SLRIFT
Trigger: AGTAAATATTCTCAGACTCCACAAAGGAGTTGGAAC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACATTCCCAAGAAGCCCATaGAATTCACTTAAACTTTTC +
Preference number: 4 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTFPRSP*NSLKLF
Trigger: GAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGAA...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGACTTATGGAGGGTTaGACTTCATCAGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRLMEG*TSSEGN
Trigger: GTTGCCCTCTGATGAAGTCCAACCCTCCATAAGTCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
3UTR CAA 72 bp CAAATATTTGCTCAGTCCTCCAGTCTACCTCATCCTTaGTATACACAGCCTAAATGTCAAAGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: QIFAQSSSLPHP*YTQPKCQRKAL
Trigger: AAGAGCTTTCCTTTGACATTTAGGCTGTGTATACAAAGGATGAGGTAGACTGGAGGACTGAGCAAATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCTCCCACCAGGTGCTTaGGAAAAAGATCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLPPGA*EKDQRL
Trigger: AAGTCTTTGATCTTTTTCTCAAGCACCTGGTGGGAG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCTCCCACCAGGTGCTTaGGAAAAAGATCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLPPGA*EKDQRL
Trigger: AAGTCTTTGATCTTTTTCTCAAGCACCTGGTGGGAG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGATAAGCTTCATCTTCTaGAGTTTCATCGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLISFIF*SFIASA
Trigger: GGCTGAGGCGATGAAACTTCAGAAGATGAAGCTTAT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTATAAGCTTCATCTTCTaGAGTTTCATCGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFISFIF*SFIASA
Trigger: GGCTGAGGCGATGAAACTTCAGAAGATGAAGCTTAT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTGGCTTCCATTTCCCTaGAGAGTGTTCATAGCCATA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFWLPFP*RVFIAI
Trigger: TATGGCTATGAACACTCTTCAGGGAAATGGAAGCCA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTGGCTTCCATTTCCCTaGAGAGTGTTCATAGCCATA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLWLPFP*RVFIAI
Trigger: TATGGCTATGAACACTCTTCAGGGAAATGGAAGCCA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLDYQQK*MVQGIQ
Trigger: CTGGATTCCCTGGACCATTCATTTTTGCTGATAGTC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFDYQQK*MVQGIQ
Trigger: CTGGATTCCCTGGACCATTCATTTTTGCTGATAGTC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp CTTCATTATTGGAATTTGAACTGGTACCTCTTCCATTCTTTCCAAATGATGATCGACTATCAGCAAAAATaGATGGTCCAGGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: LHYWNLNWYLFHSFQMMIDYQQK*MVQGIQ
Trigger: CTGGATTCCCTGGACCATTCATTTTTGCTGATAGTC...GATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR TCA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAATATATCCTAAGCCTATaGGCCGGAATAGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEYILSL*AGIAKI
Trigger: GATTTTAGCTATTCCGGCTCATAGGCTTAGGATATA...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATTACATGTGCCAATGCTaGATGATCATAAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYYMCQC*MIIRKM
Trigger: CATCTTCCTTATGATCATTCAGCATTGGCACATGTA...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAAAAGATCAAAGACTTaGGGCAGGCAGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLKRSKT*GRQISS
Trigger: GGAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSASPG*EHYPKQ
Trigger: TTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSASPG*EHYPKQ
Trigger: TTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp AATGGAGACTGCATCTTATCTTTATCCCAGGAGGATTCACTTCCACCTGTGTTAAATTCCAAGGCTTCCTaGAATTTTCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: NGDCILSLSQEDSLPPVLNSKAS*NFLLVF
Trigger: AAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATT...TAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCCGGCACTGTTGCTGTaGTTATTAACCACGAAACTA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLPALLL*LLTTKL
Trigger: TAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTCTGATTCATTGCCATaGCAACTGATGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSDSLP*QLMQEV
Trigger: TACCTCCTGCATCAGTTGCCATGGCAATGAATCAGA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTCTGATTCATTGCCATaGCAACTGATGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSDSLP*QLMQEV
Trigger: TACCTCCTGCATCAGTTGCCATGGCAATGAATCAGA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTATTGGAATTTGAACTaGTACCTCTTCCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIYWNLN*YLFHSF
Trigger: GAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATA...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGAACTTCCACTGCTTTaGCTGCAACTAAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFELPLL*LQLRVL
Trigger: AAGCACTCTTAGTTGCAGCCAAAGCAGTGGAAGTTC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510272.5
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCATTGGTGCAATCGGTaGACAAAGTTTCGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFHWCNR*TKFRSL
Trigger: AAGACTTCGAAACTTTGTTCACCGATTGCACCAATG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGATAGCAGCACTATCATaGGGAGTCCCATTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLIAALS*GVPLFS
Trigger: AGAAAACAATGGGACTCCTCATGATAGTGCTGCTAT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTATAGCAGCACTATCATaGGGAGTCCCATTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFIAALS*GVPLFS
Trigger: AGAAAACAATGGGACTCCTCATGATAGTGCTGCTAT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATATAAGGGTTTGTTCTTaGGCTCTAAACAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYIRVCS*ALNRDD
Trigger: ATCATCTCTGTTTAGAGCTCAAGAACAAACCCTTAT...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAAATGCAACACAAACTGTaGACATTACAAACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEMQHKL*TLQTGK
Trigger: CTTTCCAGTTTGTAATGTTCACAGTTTGTGTTGCAT...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp ATGCTGAATGATCATAAGGAAGATGCCAGTAATGAACTGCTGACACTGATCCTTAATTCCAAGGCTTCCTaGAATTTTCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: MLNDHKEDASNELLTLILNSKAS*NFLLVF
Trigger: AAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATT...AAGGATCAGTGTCAGCAGTTCATTACTGGCATCTTCCTTATGATCATTCAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATAGTAAATGTGAGACTTaGCCTGTGGTATATATCCTA +
Preference number: 4 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYSKCET*PVVYIL
Trigger: TAGGATATATACCACAGGGCAAGTCTCACATTTACT...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTCCAGGTGCAGCAAATaGAGACTGCATCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSRCSK*RLHLIF
Trigger: AAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTCCAGGTGCAGCAAATaGAGACTGCATCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFSRCSK*RLHLIF
Trigger: AAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATGTAGGAAAAGAAATGTaGATGAATCCGTACAAATCC +
Preference number: 4 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYVGKEM*MNPYKS
Trigger: GGATTTGTACGGATTCATCCACATTTCTTTTCCTAC...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp TGTATACTGCATGAAGGGAGACTAGTTTGGAATATCGTTTCAGCTACAGTGTTTCAAATATCGATCATTTaGACAAATGATTCACCACCT +
Preference number: 4 (lower is better)
Translates to: CILHEGRLVWNIVSATVFQISII*TNDSPP
Trigger: AGGTGGTGAATCATTTGTGCAAATGATCGATATTTG...AAACACTGTAGCTGAAACGATATTCCAAACTAGTCTCCCTTCATGCAGTATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCATCCTTTATGTGTCTaGTTACAAGGCCTATTAGGA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFHPLCV*LQGLLG
Trigger: TCCTAATAGGCCTTGTAAGCAGACACATAAAGGATG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTACAAAGCTTGAATTTTTaGACACTGGTAATTGTTCCA +
Preference number: 4 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVQSLNF*TLVIVP
Trigger: TGGAACAATTACCAGTGTCCAAAAATTCAAGCTTTG...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp GAACATTACAAACTGGAAAGCAATAGCACACACTATGTCCCCTTAAAAAGGGTAAGGTATCATGGTGAGTaGCAGAATTTTCTAGATAAT +
Preference number: 4 (lower is better)
Translates to: EHYKLESNSTHYVPLKRVRYHGE*QNFLDN
Trigger: ATTATCTAGAAAATTCTGCCACTCACCATGATACCT...TACCCTTTTTAAGGGGACATAGTGTGTGCTATTGCTTTCCAGTTTGTAATGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLYLVQG*LHYWNL
Trigger: CAAATTCCAATAATGAAGTCACCCTTGGACAAGATA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFYLVQG*LHYWNL
Trigger: CAAATTCCAATAATGAAGTCACCCTTGGACAAGATA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR TCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGAGATGATCTGATATaGACTCTGGATGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRDDLI*TLDVNK
Trigger: CTTATTGACATCCAGAGTTCATATCAGATCATCTCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTAATTCCAAGGCTTCCTaGAATTTTCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFNSKAS*NFLLVF
Trigger: AAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAATTCCAAGGCTTCCTaGAATTTTCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLNSKAS*NFLLVF
Trigger: AAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR GCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGCTGACAGAGTTTATTaGTTTGGGATTTATCAGATA +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFADRVY*FGIYQI
Trigger: TATCTGATAAATCCCAAAGCAATAAACTCTGTCAGC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CCA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTATTGGAATTTGAACTaGTACCTCTTCCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLYWNLN*YLFHSF
Trigger: GAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CCA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTATTGGAATTTGAACTaGTACCTCTTCCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFYWNLN*YLFHSF
Trigger: GAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS GCA 90 bp CCCCGGGACGCCGGCGCCGCTGGAAGTTGCAGAGATCACTGGAGATaGGGAGACAGCCATGGTCACTCTGTCTCTATCGTGGGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: PRDAGAAGSCRDHWR*GDSHGHSVSIVGPP
Trigger: CGGAGGACCCACGATAGAGACAGAGTGACCATGGCTGTCTCCGCATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCCGGCGTCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS CCA 90 bp CTCGCACTCACTCCCTCACTCTCGCTCTCTCTGGCGCGCTCTCGCTaGCTCCGAACTGTTCGCAAGTCTTCAGCAGCCGGCTCACGCTCA +
Preference number: 5 (lower is better)
Translates to: LALTPSLSLSLARSR*LRTVRKSSAAGSRS
Trigger: TGAGCGTGAGCCGGCTGCTGAAGACTTGCGAACAGTTCGGAGCCAGCGAGAGCGCGCCAGAGAGAGCGAGAGTGAGGGAGTGAGTGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS CCA 90 bp ACGAAGCCACCTTCATCCCGTGCATGTCGACCATGCGGCACTCGTTaGTGTTGGTGTTGCCCCTGCCGCCGCCTCCGGCACTGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: TKPPSSRACRPCGTR*CWCCPCRRLRHCCC
Trigger: ACAGCAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAACGAGTGCCGCATGGTCGACATGCACGGGATGAAGGTGGCTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCCGGCGCCGCTGGAAGTaGCAGAGATCACTGGAGATG +
Preference number: 5 (lower is better)
Translates to: GPGNPAGNACPGVSCILSRRRWK*QRSLEM
Trigger: CATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCCG...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS CCA 90 bp CGCCGCTGGAAGTTGCAGAGATCACTGGAGATGCGGAGACAGCCATaGTCACTCTGTCTCTATCGTGGGTCCTCCGGCCCTCGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: RRWKLQRSLEMRRQP*SLCLYRGSSGPRFL
Trigger: GAGAAAGCGAGGGCCGGAGGACCCACGATAGAGACAGAGTGACCATGGCTGTCTCCGCATCTCCAGTGATCTCTGCAACTTCCAGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCTTCCTGGTGATGAGTTaGCAGCGGTTTACCCCGGGC +
Preference number: 5 (lower is better)
Translates to: GPGNPAGNACPGVSCILSFLVMS*QRFTPG
Trigger: GCCCGGGGTAAACCGCTGCAAACTCATCACCAGGAA...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS CCA 90 bp ATCACTGGAGATGCGGAGACAGCCATGGTCACTCTGTCTCTATCGTaGGTCCTCCGGCCCTCGCTTTCTCGCCCTGACTCCTCTAGATCC +
Preference number: 5 (lower is better)
Translates to: ITGDAETAMVTLSLS*VLRPSLSRPDSSRS
Trigger: GGATCTAGAGGAGTCAGGGCGAGAAAGCGAGGGCCGGAGGACCCACGATAGAGACAGAGTGACCATGGCTGTCTCCGCATCTCCAGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCGTCACTAGTGGTGGCTaGCTTAAGTGCCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GPGNPAGNACPGVSCILSVTSGG*LKCLLH
Trigger: GTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGAC...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTCGGCGCCGCTGGAAGTaGCAGAGATCACTGGAGATG +
Preference number: 5 (lower is better)
Translates to: KMNGPGNPAGNACPGVSCRRRWK*QRSLEM
Trigger: CATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCCG...ACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCATGAGCAATTCCATGTaGGGGTCCAGGTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: GPGNPAGNACPGVSCILSMSNSM*GSRCSK
Trigger: TTTGCTGCACCTGGACCCCAACATGGAATTGCTCAT...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCCTTGCTCCCGGCGCTTaGATTCAAATTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GPGNPAGNACPGVSCILSLAPGA*IQIPRL
Trigger: AAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAG...GGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AGTGTTCATAGCCATAAGCTTCATCTTCTGAAGTTTCATCGCCTCAGCCATCGCCGGCACTCGTTGGTGTaGGTGTTGCCCCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SVHSHKLHLLKFHRLSHRRHSLV*VLPLPP
Trigger: CGGCGGCAGGGGCAACACCAACACCAACGAGTGCCG...GCGATGGCTGAGGCGATGAAACTTCAGAAGATGAAGCTTATGGCTATGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CAA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCGGCACTCGTTGGTGTaGGTGTTGCCCCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIRHSLV*VLPLPP
Trigger: CGGCGGCAGGGGCAACACCAACACCAACGAGTGCCG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGAAAAAGATCAAAGACTaGCGGCAGGCAGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: GIQRAMPAQESAVSCPRVKKIKD*RQADQF
Trigger: GAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTTT...CACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATTCCAGTCTCTTCAGCTaGGTGTACACAGTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: VVACLSACSTCSRRFDSNSSLFS*VYTVCK
Trigger: CTTGCACACTGTGTACACCAAGCTGAAGAGACTGGA...ATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp TCAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGGGCAGATCCAGTCTATaGGTTAGCAGGTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SADPECWSTESPRRTDYQGRSSL*VSRWFC
Trigger: GCAGAACCACCTGCTAACCAATAGACTGGATCTGCC...CTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTGGTTCATCTGATTCATaGCCATGGCAACTGATGCAG +
Preference number: 5 (lower is better)
Translates to: KMNGPGNPAGNACPGVSCGSSDS*PWQLMQ
Trigger: CTGCATCAGTTGCCATGGCAATGAATCAGATGAACC...ACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp ACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCACTTGCTCCCGGCGCTTCTTCTTCAGGCGCTTTaGCATAGTAGTTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: TVTSGGLLKCLLHLLPALLLQAL*HSSSAL
Trigger: CAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAG...AAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp CAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAGTCACTAGTGGTGGCTaGCTTAAGTGCCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: QTLNVGQQSLHGGQTISKVTSGG*LKCLLH
Trigger: GTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGAC...TTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGACAGACTTATGGAGGGTaGGACTTCATCAGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: STALPDMGICHDTEGQCGQTYGG*DFIRGQ
Trigger: TTGCCCTCTGATGAAGTCCAACCCTCCATAAGTCTG...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp CATAGTAGTTCTGCTTTGAAGCTCAACTGCAAGTTGTCTTTCAAGGTTTTCTCTCGGCACTCGTTGGTGTaGGTGTTGCCCCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: HSSSALKLNCKLSFKVFSRHSLV*VLPLPP
Trigger: CGGCGGCAGGGGCAACACCAACACCAACGAGTGCCG...AGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGAACTACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp CCTGCTCCACTTGCTCCCGGCGCTTTGATTCAAATTCCAAGGCTTCCTGCAATTTCCAGTCTCTTCAGCTaGGTGTACACAGTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: PAPLAPGALIQIPRLPAISSLFS*VYTVCK
Trigger: CTTGCACACTGTGTACACCAAGCTGAAGAGACTGGA...AATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp ACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATTTCCTGGTGATGAGTTaGCAGCGGTTTACCCCGGGC +
Preference number: 5 (lower is better)
Translates to: TLNVGQQSLHGGQTISKNFLVMS*QRFTPG
Trigger: GCCCGGGGTAAACCGCTGCAAACTCATCACCAGGAA...ATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS CCA 90 bp TTGGTGTTGGTGTTGCCCCTGCCGCCGCCTCCGGCACTGTTGCTGTaGTTATTAACCACGAAACTATTGATCATATTAGGAGTAAGACGA +
Preference number: 5 (lower is better)
Translates to: LVLVLPLPPPPALLL*LLTTKLLIILGVRR
Trigger: TCGTCTTACTCCTAATATGATCAATAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCGGCGCCGCTGGAAGTaGCAGAGATCACTGGAGATG +
Preference number: 5 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCRRRWK*QRSLEM
Trigger: CATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCCG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAATTCCTGGTGATGAGTTaGCAGCGGTTTACCCCGGGC +
Preference number: 5 (lower is better)
Translates to: VKPARTFQAEYNCCAISKFLVMS*QRFTPG
Trigger: GCCCGGGGTAAACCGCTGCAAACTCATCACCAGGAA...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTGGGGCCTGCCGGGTCTaGAACTGGCATTGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCGACRV*NWHWCN
Trigger: ATTGCACCAATGCCAGTTCAAGACCCGGCAGGCCCC...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373131.5
CDS-3UTR CAA 90 bp TTTCTCCTTCTTCAGGCGCTTTTGCATAGTAGTTCTGCTTTGAAGCTCAACTGCTTCTGCTGCAGTGGATaGAGGGTTGGAGCACCCCCA +
Preference number: 5 (lower is better)
Translates to: FLLLQALLHSSSALKLNCFCCSG*RVGAPP
Trigger: TGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGAA...GCAGTTGAGCTTCAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAGGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp CAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCGCTGCAGCAGCCATGTaGGCAATAGTATTGAGATGG +
Preference number: 5 (lower is better)
Translates to: QSLHGGQTISKNEWSRESAAAAM*AIVLRW
Trigger: CCATCTCAATACTATTGCCAACATGGCTGCTGCAGC...GGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCGGAGTCAGCTGTATCTaGTCCAAGGGTGACTTCATT +
Preference number: 5 (lower is better)
Translates to: FNILRPLSLVVACLSACSGVSCI*SKGDFI
Trigger: AATGAAGTCACCCTTGGACAAGATACAGCTGACTCC...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp TCAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCTCTTCCTTCTGGCATaGGTGCAATCGGTGAACAAA +
Preference number: 5 (lower is better)
Translates to: SADPECWSTESPRRTDYQLFLLA*VQSVNK
Trigger: TTTGTTCACCGATTGCACCAATGCCAGAAGGAAGAG...CTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCGGCACTCGTTGGTGTaGGTGTTGCCCCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRHSLV*VLPLPP
Trigger: CGGCGGCAGGGGCAACACCAACACCAACGAGTGCCG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp TTTAACATCCTCAGGCCACTGTCACTAGTGGTGGCTTGCTTAAGTGCCTGCTCCAAAAAGATCAAAGACTaGCGGCAGGCAGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: FNILRPLSLVVACLSACSKKIKD*RQADQF
Trigger: GAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTTT...GGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATTGGAGCTGCAGCAGCCATGTaGGCAATAGTATTGAGATGG +
Preference number: 5 (lower is better)
Translates to: NACPGVSCILSKGDFIIGAAAAM*AIVLRW
Trigger: CCATCTCAATACTATTGCCAACATGGCTGCTGCAGC...TCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp ACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCAGCGGGCAATGGAGTCAGCTGTATCTaGTCCAAGGGTGACTTCATT +
Preference number: 5 (lower is better)
Translates to: TEDRLSAKMNGPGNPAGNGVSCI*SKGDFI
Trigger: AATGAAGTCACCCTTGGACAAGATACAGCTGACTCC...ATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AAAATGAATGGTCCAGGGAATCCAGCGGGCAATGCCTGCCCAGGAGTCAGCTGTTTGTTTTCTTGTCATTaGCCTCTTCCTTCTGGCATT +
Preference number: 5 (lower is better)
Translates to: KMNGPGNPAGNACPGVSCLFSCH*PLPSGI
Trigger: AATGCCAGAAGGAAGAGGCAAATGACAAGAAAACAA...ACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR CAA 90 bp CAGCAGACCCTGAATGTTGGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCGTAATAGTTACCTCCTaGCATAGCAGCACTATCATG +
Preference number: 5 (lower is better)
Translates to: QQTLNVGQQSLHGGQTISVIVTS*HSSTIM
Trigger: CATGATAGTGCTGCTATGCAAGGAGGTAACTATTAC...GCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGAGCGAAACTCTGGCATaGGTGCAATCGGTGAACAAA +
Preference number: 5 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRSETLA*VQSVNK
Trigger: TTTGTTCACCGATTGCACCAATGCCAGAGTTTCGCT...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CAA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGTTCTGCTGCAGTGGATaGAGGGTTGGAGCACCCCCA +
Preference number: 5 (lower is better)
Translates to: SISGIPVSFNILRPLSLVFCCSG*RVGAPP
Trigger: TGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGAA...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGAAGGGTGACTTCATTATaGGAATTTGAACTGGTACCT +
Preference number: 5 (lower is better)
Translates to: STALPDMGICHDTEGQCGRVTSL*EFELVP
Trigger: AGGTACCAGTTCAAATTCCAATAATGAAGTCACCCT...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACGTGCCTATGATCAGTaGGAGTTCCGGCATCAGTGT +
Preference number: 5 (lower is better)
Translates to: VKPARTFQAEYNCCAISKRAYDQ*EFRHQC
Trigger: ACACTGATGCCGGAACTCCAACTGATCATAGGCACG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000484479.1
CDS-3UTR CAA 90 bp GGGGTTAAAGGACTTGCTCCACCATCAACAGTTCAAAGGAAAAACTGGGTGTGGAACTCAGTTGGCTTTTaGCAGGAGATGCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GVKGLAPPSTVQRKNWVWNSVGF*QEMLGA
Trigger: AGCACCAAGCATCTCCTGCAAAAAGCCAACTGAGTT...CCACACCCAGTTTTTCCTTTGAACTGTTGATGGTGGAGCAAGTCCTTTAACCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp AGCACAGCACTGCCTGACATGGGCATATGCCATGACACAGAAGGTCAGTGTGGAAGTCTACCTCATCCTTaGTATACACAGCCTAAATGT +
Preference number: 5 (lower is better)
Translates to: STALPDMGICHDTEGQCGSLPHP*YTQPKC
Trigger: ACATTTAGGCTGTGTATACAAAGGATGAGGTAGACT...TCCACACTGACCTTCTGTGTCATGGCATATGCCCATGTCAGGCAGTGCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGGGGGCCTGCCGGGTCTaGAACTGTAATTCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: SISGIPVSFNILRPLSLVGACRV*NCNSSY
Trigger: GTAGCTGGAATTACAGTTCAAGACCCGGCAGGCCCC...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CAA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAATCCAGTCTCTTCAGCTaGGTGTACACAGTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: VKPARTFQAEYNCCAISKSSLFS*VYTVCK
Trigger: CTTGCACACTGTGTACACCAAGCTGAAGAGACTGGA...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGGCAGATCCAGTCTATaGGTTAGCAGGTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIGRSSL*VSRWFC
Trigger: GCAGAACCACCTGCTAACCAATAGACTGGATCTGCC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAGCTGCAGCAGCCATGTaGGCAATAGTATTGAGATGG +
Preference number: 5 (lower is better)
Translates to: VKPARTFQAEYNCCAISKAAAAM*AIVLRW
Trigger: CCATCTCAATACTATTGCCAACATGGCTGCTGCAGC...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACTTGCTCCCGGCGCTTaGATTCAAATTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: VKPARTFQAEYNCCAISKLAPGA*IQIPRL
Trigger: AAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CAA 90 bp GGTCAACAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGTAATAGTTACCTCCTaGCATAGCAGCACTATCATG +
Preference number: 5 (lower is better)
Translates to: GQQSLHGGQTISKNEWSRVIVTS*HSSTIM
Trigger: CATGATAGTGCTGCTATGCAAGGAGGTAACTATTAC...CCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGGGCCTGCCGGGTCTaGAACTTCCACTGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGACRV*NFHCFG
Trigger: GCCAAAGCAGTGGAAGTTCAAGACCCGGCAGGCCCC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510272.5
CDS TCA 90 bp AGCGGGCAATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTaGCTTCATTATTGGAATTTGAACTGGTACCTCTTCTTAATTATC +
Preference number: 5 (lower is better)
Translates to: SGQCLPRSQLYLVQG*LHYWNLNWYLFLII
Trigger: GATAATTAAGAAGAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCGGCGCCGCTGGAAGTaGCAGAGATCACTGGAGATG +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFRRRWK*QRSLEM
Trigger: CATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCCG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTATGAGCAATTCCATGTaGGGGTCCAGGTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCMSNSM*GSRCSK
Trigger: TTTGCTGCACCTGGACCCCAACATGGAATTGCTCAT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCTTGCTCCCGGCGCTTaGATTCAAATTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCLAPGA*IQIPRL
Trigger: AAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CAA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAAGTCACTAGTGGTGGCTaGCTTAAGTGCCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEVTSGG*LKCLLH
Trigger: GTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGAC...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCCGCCTCCGGCACTGTaGCTGTGGTTATTAACCACG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLPPPAL*LWLLTT
Trigger: CGTGGTTAATAACCACAGCAACAGTGCCGGAGGCGG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTTCCTGGTGATGAGTTaGCAGCGGTTTACCCCGGGC +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFFLVMS*QRFTPG
Trigger: GCCCGGGGTAAACCGCTGCAAACTCATCACCAGGAA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGGTCTTGAACTGGCATaGGTGCAATCGGTGAACAAA +
Preference number: 5 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIGLELA*VQSVNK
Trigger: TTTGTTCACCGATTGCACCAATGCCAGTTCAAGACC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373131.5
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTTCTGCTGCAGTGGATaGAGGGTTGGAGCACCCCCA +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLFCCSG*RVGAPP
Trigger: TGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGAA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTTTCTGCTGCAGTGGATaGAGGGTTGGAGCACCCCCA +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFFCCSG*RVGAPP
Trigger: TGGGGGTGCTCCAACCCTCAATCCACTGCAGCAGAA...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTGGTTCATCTGATTCATaGCCATGGCAACTGATGCAG +
Preference number: 5 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIGSSDS*PWQLMQ
Trigger: CTGCATCAGTTGCCATGGCAATGAATCAGATGAACC...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATTGGAAGGGTGACTTCATTATaGGAATTTGAACTGGTACCT +
Preference number: 5 (lower is better)
Translates to: NACPGVSCILSKGDFIIGRVTSL*EFELVP
Trigger: AGGTACCAGTTCAAATTCCAATAATGAAGTCACCCT...TCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAACTTCTTCAGGCGCTTTaGCATAGTAGTTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: VKPARTFQAEYNCCAISKLLQAL*HSSSAL
Trigger: CAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAG...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CAA 90 bp AATGCCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATTGGAAGTTCCTCTCTATTGTaGGGCATCATAACCATTCTT +
Preference number: 5 (lower is better)
Translates to: NACPGVSCILSKGDFIIGSSSLL*GIITIL
Trigger: AAGAATGGTTATGATGCCCAACAATAGAGAGGAACT...TCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS-3UTR CAA 90 bp CAGAGTCTCCACGGAGGACAGACTATCAGCAAAAATGAATGGTCCAGGGAATCCATAAGTTCCTCTCTATaGTTGGGCATCATAACCATT +
Preference number: 5 (lower is better)
Translates to: QSLHGGQTISKNEWSRESISSSL*LGIITI
Trigger: AATGGTTATGATGCCCAACAATAGAGAGGAACTTAT...GGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461604.6
CDS GCA 90 bp CCAGTCGCAGCTCCTTCTTTTCTTGTTGAATCTGCTTCTCCTGGATaGGAGCATTATCCAAAGCAACTTTCAGCAGACCATTTATTTTGT +
Preference number: 5 (lower is better)
Translates to: PVAAPSFLVESASPG*EHYPKQLSADHLFC
Trigger: ACAAAATAAATGGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTAAAAAGATCAAAGACTaGCGGCAGGCAGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCKKIKD*RQADQF
Trigger: GAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTTT...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp TCTGCTTTGAAGCTCAACTGCAAGTTGTCTTTCAAGGTTTTCTCTAATTTCTCTGGCAGATCCAGTCTATaGGTTAGCAGGTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SALKLNCKLSFKVFSNFSGRSSL*VSRWFC
Trigger: GCAGAACCACCTGCTAACCAATAGACTGGATCTGCC...AGAGAAATTAGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp AGCATCTTCATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTCTTCTTCAGGCGCTTTaGCATAGTAGTTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SIFIYVKPARTFQAEYNCLLQAL*HSSSAL
Trigger: CAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAG...ACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAATGAAGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGTCACTAGTGGTGGCTaGCTTAAGTGCCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFVTSGG*LKCLLH
Trigger: GTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGAC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGTCACTAGTGGTGGCTaGCTTAAGTGCCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLVTSGG*LKCLLH
Trigger: GTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGAC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGCAGATCCAGTCTATaGGTTAGCAGGTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGRSSL*VSRWFC
Trigger: GCAGAACCACCTGCTAACCAATAGACTGGATCTGCC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGCAGATCCAGTCTATaGGTTAGCAGGTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGRSSL*VSRWFC
Trigger: GCAGAACCACCTGCTAACCAATAGACTGGATCTGCC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATCATCAGTGTTCAGGCTaGCATAGCAGCACTATCATG +
Preference number: 5 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYHQCSG*HSSTIM
Trigger: CATGATAGTGCTGCTATGCAAGCCTGAACACTGATG...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp CATCAAAATAATGATAACAGGTATCTGCCCCCAGCCAATGGTCAGATCTCCTCTACATTCCTTCAGAGCTaGGAATTACTGAAATGTCAC +
Preference number: 5 (lower is better)
Translates to: HQNNDNRYLPPANGQISSTFLQS*ELLKCH
Trigger: GTGACATTTCAGTAATTCCAAGCTCTGAAGGAATGT...AGAGGAGATCTGACCATTGGCTGGGGGCAGATACCTGTTATCATTATTTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTCCAGTCTCTTCAGCTaGGTGTACACAGTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLSSLFS*VYTVCK
Trigger: CTTGCACACTGTGTACACCAAGCTGAAGAGACTGGA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTATGAGCAATTCCATGTaGGGGTCCAGGTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFMSNSM*GSRCSK
Trigger: TTTGCTGCACCTGGACCCCAACATGGAATTGCTCAT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGATGAGCAATTCCATGTaGGGGTCCAGGTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLMSNSM*GSRCSK
Trigger: TTTGCTGCACCTGGACCCCAACATGGAATTGCTCAT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp TCTGCTTTGAAGCTCAACTGCAAGTTGTCTTTCAAGGTTTTCTCTAATTTCTCTGGTTCATCTGATTCATaGCCATGGCAACTGATGCAG +
Preference number: 5 (lower is better)
Translates to: SALKLNCKLSFKVFSNFSGSSDS*PWQLMQ
Trigger: CTGCATCAGTTGCCATGGCAATGAATCAGATGAACC...AGAGAAATTAGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGCTGCAGCAGCCATGTaGGCAATAGTATTGAGATGG +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFAAAAM*AIVLRW
Trigger: CCATCTCAATACTATTGCCAACATGGCTGCTGCAGC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGCTGCAGCAGCCATGTaGGCAATAGTATTGAGATGG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLAAAAM*AIVLRW
Trigger: CCATCTCAATACTATTGCCAACATGGCTGCTGCAGC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTAGGGTGACTTCATTATaGGAATTTGAACTGGTACCT +
Preference number: 5 (lower is better)
Translates to: IYVKPARTFQAEYNCCAIRVTSL*EFELVP
Trigger: AGGTACCAGTTCAAATTCCAATAATGAAGTCACCCT...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CAA 90 bp ACAGTAATAGTTACCTCCTTGCATAGCAGCACTATCATGAGGAGTCCCATTGTTAGGGTGACTTCATTATaGGAATTTGAACTGGTACCT +
Preference number: 5 (lower is better)
Translates to: TVIVTSLHSSTIMRSPIVRVTSL*EFELVP
Trigger: AGGTACCAGTTCAAATTCCAATAATGAAGTCACCCT...AACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461604.6
ENST00000506327.6
CDS-3UTR CAA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATCTTCTTCAGGCGCTTTaGCATAGTAGTTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYLLQAL*HSSSAL
Trigger: CAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAG...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCTTGCTCCCGGCGCTTaGATTCAAATTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLAPGA*IQIPRL
Trigger: AAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCTTGCTCCCGGCGCTTaGATTCAAATTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLAPGA*IQIPRL
Trigger: AAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTTCTAAAGGTAAAAAGGGGAATTaGATACATACAAATGTGACC +
Preference number: 5 (lower is better)
Translates to: VKPARTFQAEYNCCAISKGKKGN*IHTNVT
Trigger: GGTCACATTTGTATGTATCAAATTCCCCTTTTTACC...TTTAGAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCCTTCTTCCACTGCTTaGGCTGCAACTAAGAGTGCT +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLPSSTA*AATKSA
Trigger: AGCACTCTTAGTTGCAGCCAAAGCAGTGGAAGAAGG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508860.5
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGTTCATCTGATTCATaGCCATGGCAACTGATGCAG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGSSDS*PWQLMQ
Trigger: CTGCATCAGTTGCCATGGCAATGAATCAGATGAACC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGTTCATCTGATTCATaGCCATGGCAACTGATGCAG +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGSSDS*PWQLMQ
Trigger: CTGCATCAGTTGCCATGGCAATGAATCAGATGAACC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATTTATGTAAAGCCAGCGAGGACCTTTCAGGCTGAATACAACTGTTGTGCCATTCTTCATTATTGGAATTaGAACTGGTACCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: IYVKPARTFQAEYNCCAILHYWN*NWYLFH
Trigger: ATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG...AATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTACATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373131.5
ENST00000484479.1
ENST00000506327.6
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGGAGTCAGCTGTATCTaGTCCAAGGGTGACTTCATT +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLGVSCI*SKGDFI
Trigger: AATGAAGTCACCCTTGGACAAGATACAGCTGACTCC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGGAGTCAGCTGTATCTaGTCCAAGGGTGACTTCATT +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFGVSCI*SKGDFI
Trigger: AATGAAGTCACCCTTGGACAAGATACAGCTGACTCC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATCAGTGTTCAGGCTaGCATAGCAGCACTATCATG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLHQCSG*HSSTIM
Trigger: CATGATAGTGCTGCTATGCAAGCCTGAACACTGATG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373131.5
ENST00000484479.1
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCTCTTCCTTCTGGCATaGGTGCAATCGGTGAACAAA +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLFLLA*VQSVNK
Trigger: TTTGTTCACCGATTGCACCAATGCCAGAAGGAAGAG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373125.9
ENST00000461604.6
CDS-3UTR CAA 90 bp TGTCTGCTTACAAGGCCTATTAGGAATAGTTCCCATAGCTGCTCAAAAATTGAATGGATAAAAACTCAGTaGGCTTTTTGCAGGAGATGC +
Preference number: 5 (lower is better)
Translates to: CLLTRPIRNSSHSCSKIEWIKTQ*AFCRRC
Trigger: GCATCTCCTGCAAAAAGCCAACTGAGTTTTTATCCA...TTCAATTTTTGAGCAGCTATGGGAACTATTCCTAATAGGCCTTGTAAGCAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp TCCCAAGAAGCCCATGGAATTCACTTAAACTTTTCCAGGGACCAGAAGAAAACAACAAAGCTTGAATTTTaGGACACTGGTAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: SQEAHGIHLNFSRDQKKTTKLEF*DTGNCS
Trigger: GGAACAATTACCAGTGTCCAAAAATTCAAGCTTTGT...TGTTTTCTTCTGGTCCCTGGAAAAGTTTAAGTGAATTCCATGGGCTTCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAAAAAGATCAAAGACTaGCGGCAGGCAGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLKKIKD*RQADQF
Trigger: GAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTTT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS-3UTR CAA 90 bp TCAATATCTGGAATTCCAGTATCTTTTAACATCCTCAGGCCACTGTCACTAGTGCTTCATTATTGGAATTaGAACTGGTACCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SISGIPVSFNILRPLSLVLHYWN*NWYLFH
Trigger: ATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG...CACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506327.6
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCTTCTTCAGGCGCTTTaGCATAGTAGTTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLLQAL*HSSSAL
Trigger: CAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCTTCTTCAGGCGCTTTaGCATAGTAGTTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLLQAL*HSSSAL
Trigger: CAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTGTAATAGTTACCTCCTaGCATAGCAGCACTATCATG +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFVIVTS*HSSTIM
Trigger: CATGATAGTGCTGCTATGCAAGGAGGTAACTATTAC...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373125.9
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGGTAATAGTTACCTCCTaGCATAGCAGCACTATCATG +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLVIVTS*HSSTIM
Trigger: CATGATAGTGCTGCTATGCAAGGAGGTAACTATTAC...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373125.9
ENST00000461604.6
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp TCATTTGAACATGTTAGGAATCTGGCTATGTCTAGACCAGAGAGTGAACAGTATTGTTCTTATAAGGGTTaGTTCTTGAGCTCTAAACAG +
Preference number: 5 (lower is better)
Translates to: SFEHVRNLAMSRPESEQYCSYKG*FLSSKQ
Trigger: CTGTTTAGAGCTCAAGAACAAACCCTTATAAGAACA...ATACTGTTCACTCTCTGGTCTAGACATAGCCAGATTCCTAACATGTTCAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGAGGGTGACTTCATTATaGGAATTTGAACTGGTACCT +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLRVTSL*EFELVP
Trigger: AGGTACCAGTTCAAATTCCAATAATGAAGTCACCCT...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGTTGTTTTCTTGTCATTaGCCTCTTCCTTCTGGCATT +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLFSCH*PLPSGI
Trigger: AATGCCAGAAGGAAGAGGCAAATGACAAGAAAACAA...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373125.9
ENST00000461604.6
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCTTCATTATTGGAATTaGAACTGGTACCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFLHYWN*NWYLFH
Trigger: ATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp ATAGTAGAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCTTCATTATTGGAATTaGAACTGGTACCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: IVEQGNHTYNFLVSNTLLLHYWN*NWYLFH
Trigger: ATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAG...CAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTCTACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000484479.1
ENST00000508860.5
ENST00000510272.5
ENST00000613770.4
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTATTGTTCCAACTCCTTaGTGGAGTCTGAGAATATTT +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFIVPTP*WSLRIF
Trigger: AAATATTCTCAGACTCCACAAAGGAGTTGGAACAAT...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS-3UTR CAA 90 bp GAACAGGGAAACCATACATATAACTTTCTAGTCTCTAACACACTACTGCATTTTCACAAAGATTGGCTTTaGGTTACAAAAGAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: EQGNHTYNFLVSNTLLHFHKDWL*VTKEVG
Trigger: TCCTACTTCTTTTGTAACCAAAAGCCAATCTTTGTG...AAAATGCAGTAGTGTGTTAGAGACTAGAAAGTTATATGTATGGTTTCCCTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS CCA 72 bp TCCCGTGCATGTCGACCATGCGGCACTCGTTGGTGTTaGTGTTGCCCCTGCCGCCGCCTCCGGCACTGTTGC +
Preference number: 6 (lower is better)
Translates to: SRACRPCGTRWC*CCPCRRLRHCC
Trigger: GCAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAACGAGTGCCGCATGGTCGACATGCACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CCA 72 bp CCTTCATCCCGTGCATGTCGACCATGCGGCACTCGTTaGTGTTGGTGTTGCCCCTGCCGCCGCCTCCGGCAC +
Preference number: 6 (lower is better)
Translates to: PSSRACRPCGTR*CWCCPCRRLRH
Trigger: GTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAACGAGTGCCGCATGGTCGACATGCACGGGATGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS GCA 72 bp GCATGTCGACCATGCGGCACTCGTTGGTGTTGGTGTTaGCCCTGCCGCCGCCTCCGGCACTGTTGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: ACRPCGTRWCWC*PCRRLRHCCCG
Trigger: ACCACAGCAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAACGAGTGCCGCATGGTCGACATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CAA 72 bp ATCCCGTGCATGTCGACCATGCGGCACTCGTTGGTGTaGGTGTTGCCCCTGCCGCCGCCTCCGGCACTGTTG +
Preference number: 6 (lower is better)
Translates to: IPCMSTMRHSLV*VLPLPPPPALL
Trigger: CAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAACGAGTGCCGCATGGTCGACATGCACGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CCA 72 bp ACTCCCTCACTCTCGCTCTCTCTGGCGCGCTCTCGCTaGCTCCGAACTGTTCGCAAGTCTTCAGCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: TPSLSLSLARSR*LRTVRKSSAAG
Trigger: GCCGGCTGCTGAAGACTTGCGAACAGTTCGGAGCCAGCGAGAGCGCGCCAGAGAGAGCGAGAGTGAGGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS CCA 72 bp ATCCCCTCGCACTCACTCCCTCACTCTCGCTCTCTCTaGCGCGCTCTCGCTGGCTCCGAACTGTTCGCAAGT +
Preference number: 6 (lower is better)
Translates to: IPSHSLPHSRSL*RALAGSELFAS
Trigger: ACTTGCGAACAGTTCGGAGCCAGCGAGAGCGCGCCAGAGAGAGCGAGAGTGAGGGAGTGAGTGCGAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS CCA 72 bp AAGTTGCAGAGATCACTGGAGATGCGGAGACAGCCATaGTCACTCTGTCTCTATCGTGGGTCCTCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: KLQRSLEMRRQP*SLCLYRGSSGP
Trigger: AGGGCCGGAGGACCCACGATAGAGACAGAGTGACCATGGCTGTCTCCGCATCTCCAGTGATCTCTGCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
CDS CAA 72 bp GTACACACCACGGGGGATATATCCAGTCTCTTCAGCTaGGTGTACACAGTGTGCAAGCCTCCCACCAGGTGC +
Preference number: 6 (lower is better)
Translates to: VHTTGDISSLFS*VYTVCKPPTRC
Trigger: GCACCTGGTGGGAGGCTTGCACACTGTGTACACCAAGCTGAAGAGACTGGATATATCCCCCGTGGTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CCA 72 bp TACACACCACGGGGGATATATCCAGTCTCTTCAGCTTaGTGTACACAGTGTGCAAGCCTCCCACCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: YTPRGIYPVSSA*CTQCASLPPGA
Trigger: AGCACCTGGTGGGAGGCTTGCACACTGTGTACACCAAGCTGAAGAGACTGGATATATCCCCCGTGGTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CAA 90 bp CCGCCGCCTCCGGCACTGTTGCTGTGGTTATTAACCACGAAACTATaGATCATATTAGGAGTAAGACGAGGGGGCTCTCTGGGAGTCGAG +
Preference number: 6 (lower is better)
Translates to: PPPPALLLWLLTTKL*IILGVRRGGSLGVE
Trigger: CTCGACTCCCAGAGAGCCCCCTCGTCTTACTCCTAATATGATCAATAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGGAGGCGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CAA 72 bp GTGTTGGTGTTGCCCCTGCCGCCGCCTCCGGCACTGTaGCTGTGGTTATTAACCACGAAACTATTGATCATA +
Preference number: 6 (lower is better)
Translates to: VLVLPLPPPPAL*LWLLTTKLLII
Trigger: TATGATCAATAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CAA 90 bp CACTCGTTGGTGTTGGTGTTGCCCCTGCCGCCGCCTCCGGCACTGTaGCTGTGGTTATTAACCACGAAACTATTGATCATATTAGGAGTA +
Preference number: 6 (lower is better)
Translates to: HSLVLVLPLPPPPAL*LWLLTTKLLIILGV
Trigger: TACTCCTAATATGATCAATAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAACGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CAA 90 bp TGCTCAACAGTACACACCACGGGGGATATATCCAGTCTCTTCAGCTaGGTGTACACAGTGTGCAAGCCTCCCACCAGGTGCTTGAGAAAA +
Preference number: 6 (lower is better)
Translates to: CSTVHTTGDISSLFS*VYTVCKPPTRCLRK
Trigger: TTTTCTCAAGCACCTGGTGGGAGGCTTGCACACTGTGTACACCAAGCTGAAGAGACTGGATATATCCCCCGTGGTGTGTACTGTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CCA 72 bp GTGTTGCCCCTGCCGCCGCCTCCGGCACTGTTGCTGTaGTTATTAACCACGAAACTATTGATCATATTAGGA +
Preference number: 6 (lower is better)
Translates to: VLPLPPPPALLL*LLTTKLLIILG
Trigger: TCCTAATATGATCAATAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGGAGGCGGCGGCAGGGGCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS TCA 72 bp AAGCAGGTAACTGCTACAGCACCCTATTCGTGCCTATaGTCAGTTGGAGTTCCGGCATCAGTGTTCAGGCTT +
Preference number: 6 (lower is better)
Translates to: KQVTATAPYSCL*SVGVPASVFRL
Trigger: AAGCCTGAACACTGATGCCGGAACTCCAACTGATCATAGGCACGAATAGGGTGCTGTAGCAGTTACCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS CCA 72 bp AACTGCTACAGCACCCTATTCGTGCCTATGATCAGTTaGAGTTCCGGCATCAGTGTTCAGGCTTGCATAGCA +
Preference number: 6 (lower is better)
Translates to: NCYSTLFVPMIS*SSGISVQACIA
Trigger: TGCTATGCAAGCCTGAACACTGATGCCGGAACTCCAACTGATCATAGGCACGAATAGGGTGCTGTAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484479.1
CDS CCA 72 bp GTAATAGTTACCTCCCTATTCGTGCCTATGATCAGTTaGAGTTCCGGCATCAGTGTTCAGGCTTGCATAGCA +
Preference number: 6 (lower is better)
Translates to: VIVTSLFVPMIS*SSGISVQACIA
Trigger: TGCTATGCAAGCCTGAACACTGATGCCGGAACTCCAACTGATCATAGGCACGAATAGGGAGGTAACTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373131.5
CDS CAA 72 bp CCGGCACTGTTGCTGTGGTTATTAACCACGAAACTATaGATCATATTAGGAGTAAGACGAGGGGGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PALLLWLLTTKL*IILGVRRGGSL
Trigger: CAGAGAGCCCCCTCGTCTTACTCCTAATATGATCAATAGTTTCGTGGTTAATAACCACAGCAACAGTGCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373125.9
ENST00000373131.5
ENST00000461604.6
ENST00000506327.6
CDS CAA 72 bp AGTAATAGTTACCTCCCTATTCGTGCCTATGATCAGTaGGAGTTCCGGCATCAGTGTTCAGGCTTGCATAGC +
Preference number: 6 (lower is better)
Translates to: SNSYLPIRAYDQ*EFRHQCSGLHS
Trigger: GCTATGCAAGCCTGAACACTGATGCCGGAACTCCAACTGATCATAGGCACGAATAGGGAGGTAACTATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373131.5
CDS CAA 90 bp CCTGCCCAGGAGTCAGCTGTATCTTGTCCAAGGGTGACTTCATTATaGGAATTTGAACTGGTACCTCTTCTTAATTATCTTTTTGGAATT +
Preference number: 6 (lower is better)
Translates to: PAQESAVSCPRVTSL*EFELVPLLNYLFGI
Trigger: AATTCCAAAAAGATAATTAAGAAGAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461604.6