RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DACH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000276644

Ensembl transcript IDs: ENST00000611519.4, ENST00000613252.5, ENST00000619232.1, ENST00000620444.4

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AATTCTGTAAGTCTGGGTAACCACTGCTACAAGAGTCTCTTGATGTaGTCAGATACAGAATTTTCAGAAGAGGAAAATGGTTCATTCCAT +
Preference number: 1 (lower is better)
Translates to: NSVSLGNHCYKSLLM*SDTEFSEEENGSFH
Trigger: ATGGAATGAACCATTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAGTGGTTACCCAGACTTACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
3UTR-3UTR TCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTCTCAGGTCTCTGGTATaGACCACAGGTGAAAATCAA +
Preference number: 2 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFLRSLV*TTGENQ
Trigger: TTGATTTTCACCTGTGGTTCATACCAGAGACCTGAG...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGCTGACACAGAGTTCTaGTGTCACCAGATGCTTAAG +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKADTEF*CHQMLK
Trigger: CTTAAGCATCTGGTGACATCAGAACTCTGTGTCAGC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTTCAAGAATCCTCTATaGCCCCTACAAGTTCATTCG +
Preference number: 2 (lower is better)
Translates to: EAQHILTLSLSATWYWTGFKNPL*PLQVHS
Trigger: CGAATGAACTTGTAGGGGGCATAGAGGATTCTTGAA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCCCATGACGAATGTCTaGCTGCAAAGTTCTTTTCTA +
Preference number: 2 (lower is better)
Translates to: QTFSGLWYEPQVKINGENPMTNV*LQSSFL
Trigger: TAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
3UTR-3UTR TCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTGCTACAAGAGTCTCTTaGTGTGCTCAGATACAGAAT +
Preference number: 2 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFATRVS*CAQIQN
Trigger: ATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGC...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTCATTCCAAGTGTTCTTaGTGGTTTCTGGAGGACATA +
Preference number: 2 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFHSKCS*WFLEDI
Trigger: TATGTCCTCCAGAAACCAGCAAGAACACTTGGAATG...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTTCAAGAATCCTCTATaGCCCCTACAAGTTCATTCG +
Preference number: 2 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFFKNPL*PLQVHS
Trigger: CGAATGAACTTGTAGGGGGCATAGAGGATTCTTGAA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR CAA 90 bp GGACATAATTCTGTAAGTCTGGGTAACCACTGCTACAAGAGTCTCTaGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATGGTTCA +
Preference number: 2 (lower is better)
Translates to: GHNSVSLGNHCYKSL*MCSDTEFSEEENGS
Trigger: TGAACCATTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAGTGGTTACCCAGACTTACAGAATTATGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
3UTR-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCCCATGACGAATGTCTaGCTGCAAAGTTCTTTTCTA +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKPMTNV*LQSSFL
Trigger: TAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGCTACAAGAGTCTCTTaGTGTGCTCAGATACAGAAT +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKATRVS*CAQIQN
Trigger: ATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTCTGGTGTTTTGATTTaGTGTTCAGCCACAATCCAT +
Preference number: 2 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFSGVLI*CSATIH
Trigger: ATGGATTGTGGCTGAACAGCAAATCAAAACACCAGA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTCCAAGTGTTCTTGCTaGTTTCTGGAGGACATAATT +
Preference number: 2 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFSKCSC*FLEDII
Trigger: AATTATGTCCTCCAGAAACCAGCAAGAACACTTGGA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGAGCGCTACATGGTATTaGACTGGTACATCAAGGTTT +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKSATWY*TGTSRF
Trigger: AAACCTTGATGTACCAGTCCAATACCATGTAGCGCT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCTCAGGTCTCTGGTATaGACCACAGGTGAAAATCAA +
Preference number: 2 (lower is better)
Translates to: LVYAKTQISKPTCITKTGLRSLV*TTGENQ
Trigger: TTGATTTTCACCTGTGGTTCATACCAGAGACCTGAG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGACAAATAAAAGTGGCTaGCACAGAGTTCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKTNKSG*HRVLMS
Trigger: TGACATCAGAACTCTGTGTCAGCCACTTTTATTTGT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTATATTTCTGGTGTTTTaGTTTGCTGTTCAGCCACAA +
Preference number: 2 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFIFLVF*FAVQPQ
Trigger: TTGTGGCTGAACAGCAAATCAAAACACCAGAAATAT...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCCCATGACGAATGTCTaGCTGCAAAGTTCTTTTCTA +
Preference number: 2 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFPMTNV*LQSSFL
Trigger: TAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
3UTR-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGATATTTCTGGTGTTTTaGTTTGCTGTTCAGCCACAA +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKIFLVF*FAVQPQ
Trigger: TTGTGGCTGAACAGCAAATCAAAACACCAGAAATAT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCATTCCAAGTGTTCTTaGTGGTTTCTGGAGGACATA +
Preference number: 2 (lower is better)
Translates to: LVYAKTQISKPTCITKTGHSKCS*WFLEDI
Trigger: TATGTCCTCCAGAAACCAGCAAGAACACTTGGAATG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGATTTACATGCCTGCATaGGTTAAAACCAGAAAGACA +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKIYMPA*VKTRKT
Trigger: TGTCTTTCTGGTTTTAACGCATGCAGGCATGTAAAT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGAGCGCTACATGGTATTaGACTGGTACATCAAGGTTT +
Preference number: 2 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSATWY*TGTSRF
Trigger: AAACCTTGATGTACCAGTCCAATACCATGTAGCGCT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGACAAATAAAAGTGGCTaGCACAGAGTTCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: LVYAKTQISKPTCITKTGTNKSG*HRVLMS
Trigger: TGACATCAGAACTCTGTGTCAGCCACTTTTATTTGT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTTACTTCCAGTTATCTaGACGAAAGTGAAAACACAT +
Preference number: 2 (lower is better)
Translates to: SWLIVSYTKELCSSIARKLLPVI*TKVKTH
Trigger: ATGTGTTTTCACTTTCGTGCAGATAACTGGAAGTAA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTCCAAGTGTTCTTGCTaGTTTCTGGAGGACATAATT +
Preference number: 2 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSKCSC*FLEDII
Trigger: AATTATGTCCTCCAGAAACCAGCAAGAACACTTGGA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGGTAATAAGCACTGTTTaGCGCTTTACTTCCAGTTAT +
Preference number: 2 (lower is better)
Translates to: LVYAKTQISKPTCITKTGVISTV*RFTSSY
Trigger: ATAACTGGAAGTAAAGCGGCAAACAGTGCTTATTAC...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTCAAACAACAAAAGGTaGTTATGGAAGAACTATGCT +
Preference number: 2 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSNNKR*LWKNYA
Trigger: AGCATAGTTCTTCCATAACCACCTTTTGTTGTTTGA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CAA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTCATTCCAAGTGTTCTaGCTGGTTTCTGGAGGACAT +
Preference number: 3 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFSFQVF*LVSGGH
Trigger: ATGTCCTCCAGAAACCAGCAAGAACACTTGGAATGA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTTCTGGTGTTTTGATTaGCTGTTCAGCCACAATCCA +
Preference number: 3 (lower is better)
Translates to: EAQHILTLSLSATWYWTGFWCFD*LFSHNP
Trigger: TGGATTGTGGCTGAACAGCAAATCAAAACACCAGAA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CAA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTGCTACAAGAGTCTCTaGATGTGCTCAGATACAGAA +
Preference number: 3 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFCYKSL*MCSDTE
Trigger: TTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTATTTCATTGGGTTGTaGTCAACATCCATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: EAQHILTLSLSATWYWTGYFIGL*STSICW
Trigger: CCAACAAATGGATGTTGACAACAACCCAATGAAATA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGCTACAAGAGTCTCTaGATGTGCTCAGATACAGAA +
Preference number: 3 (lower is better)
Translates to: LVYAKTQISKPTCITKTGCYKSL*MCSDTE
Trigger: TTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTATTTCATTGGGTTGTaGTCAACATCCATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: LVYAKTQISKPTCITKTGYFIGL*STSICW
Trigger: CCAACAAATGGATGTTGACAACAACCCAATGAAATA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
3UTR CCA 72 bp CACATTTTAACTTTATCACTCAGCGCTACATGGTATTaGACTGGTACATCAAGGTTTGTTAGGTTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: HILTLSLSATWY*TGTSRFVRFCF
Trigger: AAAACAAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGGAGGGGGCCGCAGCTaGTGCTGCTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGGGGRS*CCYCCC
Trigger: GCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCGGGCGGAACAGAGTTaGCCCAGAGGACGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENRAEQS*PRGRRG
Trigger: CCCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGGAGGGGGCCGCAGCTaGTGCTGCTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENGGGRS*CCYCCC
Trigger: GCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTGCTGGGATCGAGGGCTaGTTTGGGGGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFAGIEG*FGGGGG
Trigger: CCCACCCCCACCCCCAAACCAGCCCTCGATCCCAGC...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGCTGGGATCGAGGGCTaGTTTGGGGGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENAGIEG*FGGGGG
Trigger: CCCACCCCCACCCCCAAACCAGCCCTCGATCCCAGC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCGGGCGGAACAGAGTTaGCCCAGAGGACGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKRAEQS*PRGRRG
Trigger: CCCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCGGGCGGAACAGAGTTaGCCCAGAGGACGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWRAEQS*PRGRRG
Trigger: CCCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTGCCGGTGCTGGCGTTaGTGGGGGTGCTGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENCRCWR*WGCWKR
Trigger: TCGCTTCCAGCACCCCCATCAACGCCAGCACCGGCA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCACTGGGGACGGGGTTaGGTACACGGGTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENHWGRG*VHGFPG
Trigger: CCCGGGAAACCCGTGTACTCAACCCCGTCCCCAGTG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCGCAGCCCTCCACCGTaGAGGAAGCCACTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENRSPPP*RKPLWP
Trigger: GGGCCAAAGTGGCTTCCTTCACGGTGGAGGGCTGCG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTGCACACCACCGGCGTaGTCTCCAGCCGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGCTPPA*SPAASA
Trigger: AGCTGAAGCGGCTGGAGATCACGCCGGTGGTGTGCA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACCGCCAGGTTGGGGTTaGAGTTGCTGCCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKPPGWG*SCCHRR
Trigger: GCGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGGAGGGGGCCGCAGCTaGTGCTGCTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWGGGRS*CCYCCC
Trigger: GCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACACGCCGGGGGTCCGATaGAAGGAGCCGGAGACGAAG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENTPGVR*KEPETK
Trigger: CTTCGTCTCCGGCTCCTTCCATCGGACCCCCGGCGT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTCACTCCTGGCTGGATaGCGCCCAGTCCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSLLAG*RPVPSG
Trigger: TCCTGAGGGGACTGGGCGCCATCCAGCCAGGAGTGA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGCAGCGGTTCACTCCTaGCTGGATGGCGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENAAVHS*LDGAQS
Trigger: GGACTGGGCGCCATCCAGCCAGGAGTGAACCGCTGC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACGCAGCCCTCCACCGTaGAGGAAGCCACTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKRSPPP*RKPLWP
Trigger: GGGCCAAAGTGGCTTCCTTCACGGTGGAGGGCTGCG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCGCAGCCCTCCACCGTaGAGGAAGCCACTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKRSPPP*RKPLWP
Trigger: GGGCCAAAGTGGCTTCCTTCACGGTGGAGGGCTGCG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCGCAGCCCTCCACCGTaGAGGAAGCCACTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWRSPPP*RKPLWP
Trigger: GGGCCAAAGTGGCTTCCTTCACGGTGGAGGGCTGCG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTGCACACCACCGGCGTaGTCTCCAGCCGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFCTPPA*SPAASA
Trigger: AGCTGAAGCGGCTGGAGATCACGCCGGTGGTGTGCA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCTGGATGGGGGACTCTaGACTTGTGCTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGLDGGL*TCAAAA
Trigger: GGCAGCAGCAGCACAAGTTCAGAGTCCCCCATCCAG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGACGCCGGGGGTCCGATaGAAGGAGCCGGAGACGAAG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKTPGVR*KEPETK
Trigger: CTTCGTCTCCGGCTCCTTCCATCGGACCCCCGGCGT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGACGCCGGGGGTCCGATaGAAGGAGCCGGAGACGAAG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWTPGVR*KEPETK
Trigger: CTTCGTCTCCGGCTCCTTCCATCGGACCCCCGGCGT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTCGCGGCCGCCAGGTTaGGGTTGCAGTTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKSRPPG*GCSCCH
Trigger: GTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATCGCGGCCGCCAGGTTaGGGTTGCAGTTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSRPPG*GCSCCH
Trigger: GTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCGGTTCACTCCTGGCTaGATGGCGCCCAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKRFTPG*MAPSPL
Trigger: GAGGGGACTGGGCGCCATCCAGCCAGGAGTGAACCG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCGGTTCACTCCTGGCTaGATGGCGCCCAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWRFTPG*MAPSPL
Trigger: GAGGGGACTGGGCGCCATCCAGCCAGGAGTGAACCG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGCAGCGGTTCACTCCTaGCTGGATGGCGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKAAVHS*LDGAQS
Trigger: GGACTGGGCGCCATCCAGCCAGGAGTGAACCGCTGC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATGCACACCACCGGCGTaGTCTCCAGCCGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKCTPPA*SPAASA
Trigger: AGCTGAAGCGGCTGGAGATCACGCCGGTGGTGTGCA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTCCCGCAAGTCGAAATaGGAGTCCTCTCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENSRKSK*ESSPGA
Trigger: AGCCCCCGGAGAGGACTCGCATTTCGACTTGCGGGA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAGCGAGAGGAAAAGTTaGCACACACCCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENSERKS*HTPPGG
Trigger: CCCTCCCGGGGGTGTGTGGCAACTTTTCCTCTCGCT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGGAGGGGGCCGCAGCTaGTGCTGCTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFGGGRS*CCYCCC
Trigger: GCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTAGCTGCTGCAGCGGCTaGTGTCAGACCTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFSCCSG*CQTCWW
Trigger: CCACCAACAGGTCTGACAGCAGCCGCTGCAGCAGCT...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611519.4
ENST00000613252.5
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCTGTTCTGCCGCCACTaGGGTCAGCCTCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGLFCRH*GQPLSL
Trigger: CAGAGATAGAGGCTGACCGCAGTGGCGGCAGAACAG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGGGAGCTGGACACGCTaGTGCTGCGATGTGATGATG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGGSWTR*CCDVMM
Trigger: CATCATCACATCGCAGCAGCAGCGTGTCCAGCTCCC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAAGTGGAAGGCTACGTaGTCCAGGCATGCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENKWKAT*SRHAGV
Trigger: CACCCCCGCATGCCTGGAGCACGTAGCCTTCCACTT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATCCGAGCAGGGGAGCTaGACACGCTGCTGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSEQGS*TRCCCD
Trigger: ATCGCAGCAGCAGCGTGTCCAGCTCCCCTGCTCGGA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTGCCGGTGCTGGCGTTaGTGGGGGTGCTGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFCRCWR*WGCWKR
Trigger: TCGCTTCCAGCACCCCCATCAACGCCAGCACCGGCA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGCCGGTGCTGGCGTTaGTGGGGGTGCTGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGCRCWR*WGCWKR
Trigger: TCGCTTCCAGCACCCCCATCAACGCCAGCACCGGCA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCACTGGGGACGGGGTTaGGTACACGGGTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFHWGRG*VHGFPG
Trigger: CCCGGGAAACCCGTGTACTCAACCCCGTCCCCAGTG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCACTGGGGACGGGGTTaGGTACACGGGTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGHWGRG*VHGFPG
Trigger: CCCGGGAAACCCGTGTACTCAACCCCGTCCCCAGTG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAAGCCACCCTTCCCTCTaGCAAGGGTGGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSHPSL*QGWEAQ
Trigger: CTGTGCTTCCCACCCTTGTCAGAGGGAAGGGTGGCT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACTGGATGGGGGACTCTaGACTTGTGCTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKLDGGL*TCAAAA
Trigger: GGCAGCAGCAGCACAAGTTCAGAGTCCCCCATCCAG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACGATGTGATGATGGGTaGCTGCCAGGCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKRCDDG*LPGLLP
Trigger: GGGGAGAAGGCCTGGCAGTCACCCATCATCACATCG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGGGAGCTGGACACGCTaGTGCTGCGATGTGATGATG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENGSWTR*CCDVMM
Trigger: CATCATCACATCGCAGCAGCAGCGTGTCCAGCTCCC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTCGCGGCCGCCAGGTTaGGGTTGCAGTTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSRPPG*GCSCCH
Trigger: GTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCCAGCCGCTTCAGCTTaGTGTAGACCGTATGCAAGC +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGPAASA*CRPYAS
Trigger: GCTTGCATACGGTCTACACCAAGCTGAAGCGGCTGG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGGCAGCGGTTCACTCCTaGCTGGATGGCGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGAAVHS*LDGAQS
Trigger: GGACTGGGCGCCATCCAGCCAGGAGTGAACCGCTGC...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTGAATGCGGCATGATGTaGGAGTTCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFECGMM*EFSGEV
Trigger: CACCTCCCCAGAGAACTCTCACATCATGCCGCATTC...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGGACAGAATGCGGCATaGTGTGAGAGTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENGQNAA*CESSLG
Trigger: CCCCAGAGAACTCTCACATCATGCCGCATTCTGTCC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTTATCCCAGGAGACATaGGACCAGGGACAGAATGCG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGLSQET*DQGQNA
Trigger: CGCATTCTGTCCCTGGTCTCATGTCTCCTGGGATAA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACATGCTGGAGGTAGGCTaGCAGGAATTAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENMLEVG*QELEGG
Trigger: CCCACCCTCTAATTCCTGTCAGCCTACCTCCAGCAT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCAGAGAGGGGGCAGGTaGGGGGCTATCAGGAACACG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGQRGGR*GAIRNT
Trigger: CGTGTTCCTGATAGCCCCTCACCTGCCCCCTCTCTG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCAGAGAGGGGGCAGGTaGGGGGCTATCAGGAACACG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFQRGGR*GAIRNT
Trigger: CGTGTTCCTGATAGCCCCTCACCTGCCCCCTCTCTG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGTCAAGGCTGTCTCTTaGGGTTGGTGTAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGVKAVS*GWCRKR
Trigger: CCGCTTTCTACACCAACCGCAAGAGACAGCCTTGAC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACTGTTCTGCCGCCACTaGGGTCAGCCTCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKLFCRH*GQPLSL
Trigger: CAGAGATAGAGGCTGACCGCAGTGGCGGCAGAACAG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTTTCAGCATCTGTTCTaGCGCCACTGCGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENFQHLF*RHCGQP
Trigger: AGGCTGACCGCAGTGGCGGCAGAACAGATGCTGAAA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTTTCAGCATCTGTTCTaGCGCCACTGCGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFFQHLF*RHCGQP
Trigger: AGGCTGACCGCAGTGGCGGCAGAACAGATGCTGAAA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTGGACACGCTGCTGCTaGGATGTGATGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFWTRCC*DVMMGD
Trigger: GTCACCCATCATCACATCGCAGCAGCAGCGTGTCCA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAGCTGGACACGCTGCTaGTGCGATGTGATGATGGGT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENSWTRC*CDVMMG
Trigger: ACCCATCATCACATCGCAGCAGCAGCGTGTCCAGCT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTGCACGAGAGGCGCTCTaGAGAGGAACGCACAAAAGT +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFAREAL*RGTHKS
Trigger: ACTTTTGTGCGTTCCTCTCCAGAGCGCCTCTCGTGC...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTCCGCCGGCACTGCCATaGTCACATATAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFPPALP*SHIRGN
Trigger: GTTTCCCCTTATATGTGACCATGGCAGTGCCGGCGG...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTCACTCCTGGCTGGATaGCGCCCAGTCCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFSLLAG*RPVPSG
Trigger: TCCTGAGGGGACTGGGCGCCATCCAGCCAGGAGTGA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGCTGTCTCTTGCGGTTaGTGTAGAAAGCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENAVSCG*CRKRGL
Trigger: GAGACCCCGCTTTCTACACCAACCGCAAGAGACAGC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGAAAAGGAGGAGGTTTaGAGGACTTGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENEKEEV*RTWALP
Trigger: AGGGAGAGCCCAAGTCCTTCAAACCTCCTCCTTTTC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGAATGCGGCATGATGTaGGAGTTCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWECGMM*EFSGEV
Trigger: CACCTCCCCAGAGAACTCTCACATCATGCCGCATTC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGAATGCGGCATGATGTaGGAGTTCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKECGMM*EFSGEV
Trigger: CACCTCCCCAGAGAACTCTCACATCATGCCGCATTC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGGACAGAATGCGGCATaGTGTGAGAGTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKGQNAA*CESSLG
Trigger: CCCCAGAGAACTCTCACATCATGCCGCATTCTGTCC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGAGCCACCCTTCCCTCTaGCAAGGGTGGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSHPSL*QGWEAQ
Trigger: CTGTGCTTCCCACCCTTGTCAGAGGGAAGGGTGGCT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCGATGTGATGATGGGTaGCTGCCAGGCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFRCDDG*LPGLLP
Trigger: GGGGAGAAGGCCTGGCAGTCACCCATCATCACATCG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTCCCGCAAGTCGAAATaGGAGTCCTCTCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSRKSK*ESSPGA
Trigger: AGCCCCCGGAGAGGACTCGCATTTCGACTTGCGGGA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGAGCGAGAGGAAAAGTTaGCACACACCCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSERKS*HTPPGG
Trigger: CCCTCCCGGGGGTGTGTGGCAACTTTTCCTCTCGCT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCCAGTCCCCTCAGGATaGGAACTTGTTCCACATTGC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENPVPSG*ELVPHC
Trigger: GCAATGTGGAACAAGTTCGCATCCTGAGGGGACTGG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTCCAGTCCCCTCAGGATaGGAACTTGTTCCACATTGC +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFPVPSG*ELVPHC
Trigger: GCAATGTGGAACAAGTTCGCATCCTGAGGGGACTGG...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTAGCTGCTGCAGCGGCTaGTGTCAGACCTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFSCCSG*CQTCWW
Trigger: CCACCAACAGGTCTGACAGCAGCCGCTGCAGCAGCT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTTTCAGCATCTGTTCTaGCGCCACTGCGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKFQHLF*RHCGQP
Trigger: AGGCTGACCGCAGTGGCGGCAGAACAGATGCTGAAA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGTTCATCTGGCTCATTaGCATGGTGACAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGVHLAH*HGDRCW
Trigger: CCAGCATCTGTCACCATGGCAATGAGCCAGATGAAC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAAGCTGGACACGCTGCTaGTGCGATGTGATGATGGGT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSWTRC*CDVMMG
Trigger: ACCCATCATCACATCGCAGCAGCAGCGTGTCCAGCT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGCACGAGAGGCGCTCTaGAGAGGAACGCACAAAAGT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKAREAL*RGTHKS
Trigger: ACTTTTGTGCGTTCCTCTCCAGAGCGCCTCTCGTGC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACCGCCGGCACTGCCATaGTCACATATAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKPPALP*SHIRGN
Trigger: GTTTCCCCTTATATGTGACCATGGCAGTGCCGGCGG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACCAGCCGCTTCAGCTTaGTGTAGACCGTATGCAAGC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKPAASA*CRPYAS
Trigger: GCTTGCATACGGTCTACACCAAGCTGAAGCGGCTGG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGCTGTCTCTTGCGGTTaGTGTAGAAAGCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKAVSCG*CRKRGL
Trigger: GAGACCCCGCTTTCTACACCAACCGCAAGAGACAGC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTAGGAGATGGAAAACCTaGAGGCAGTGGTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGRRWKT*RQWLSM
Trigger: CATGGACAACCACTGCCTCCAGGTTTTCCATCTCCT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGCAATGGTGCTGAGGTaGTTCATCTGGCTCATTGCC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENAMVLR*FIWLIA
Trigger: GGCAATGAGCCAGATGAACCACCTCAGCACCATTGC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGAAAAGGAGGAGGTTTaGAGGACTTGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKEKEEV*RTWALP
Trigger: AGGGAGAGCCCAAGTCCTTCAAACCTCCTCCTTTTC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATTATCCCAGGAGACATaGGACCAGGGACAGAATGCG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKLSQET*DQGQNA
Trigger: CGCATTCTGTCCCTGGTCTCATGTCTCCTGGGATAA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTTATCCCAGGAGACATaGGACCAGGGACAGAATGCG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKLSQET*DQGQNA
Trigger: CGCATTCTGTCCCTGGTCTCATGTCTCCTGGGATAA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGGTCTCATCGACACTTaGATTCATGTCCCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGGLIDT*IHVPVF
Trigger: GAAAACGGGGACATGAATTCAAGTGTCGATGAGACC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611519.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATCATGTCCCATGTCATaGCCGGCCAAATCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSCPMS*PAKSPS
Trigger: AGAGGGAGATTTGGCCGGTCATGACATGGGACATGA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGTCAAGGCTGTCTCTTaGGGTTGGTGTAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKVKAVS*GWCRKR
Trigger: CCGCTTTCTACACCAACCGCAAGAGACAGCCTTGAC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGTCAAGGCTGTCTCTTaGGGTTGGTGTAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWVKAVS*GWCRKR
Trigger: CCGCTTTCTACACCAACCGCAAGAGACAGCCTTGAC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGTCAAGGCTGTCTCTTaGGGTTGGTGTAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKVKAVS*GWCRKR
Trigger: CCGCTTTCTACACCAACCGCAAGAGACAGCCTTGAC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTGGCAGTGGTTGTCCATaGCCAGTTAGAGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFGSGCP*PVRESL
Trigger: CAAACTCTCTCTAACTGGGCATGGACAACCACTGCC...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCTGTTCTGCCGCCACTaGGGTCAGCCTCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFLFCRH*GQPLSL
Trigger: CAGAGATAGAGGCTGACCGCAGTGGCGGCAGAACAG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAAACAGGTGACTCTATaGCAGGAGCAGAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENKQVTL*QEQSNG
Trigger: GCCATTGCTCTGCTCCTGGCATAGAGTCACCTGTTT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTCTGTTCCAAGGGCTTaGATAGAGCGCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSVPRA*IERKCG
Trigger: ACCACATTTGCGCTCTATGCAAGCCCTTGGAACAGA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGTTCATCTGGCTCATTaGCATGGTGACAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENVHLAH*HGDRCW
Trigger: CCAGCATCTGTCACCATGGCAATGAGCCAGATGAAC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGATGTGAGAGTTCTCTaGGGAGGTGACACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGDVRVL*GGDTLS
Trigger: ACTCAAAGTGTCACCTCCCCAGAGAACTCTCACATC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTGCTGTCAGACCTGTTaGTGGAATTATCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGCCQTC*WNYPRR
Trigger: TCTCCTGGGATAATTCCACCAACAGGTCTGACAGCA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611519.4
ENST00000613252.5
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAGGAGATGGAAAACCTaGAGGCAGTGGTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENRRWKT*RQWLSM
Trigger: CATGGACAACCACTGCCTCCAGGTTTTCCATCTCCT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCCAAATCTCCCTCTTTaGGCCCAGGAAGTACATTTG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGPNLPL*AQEVHL
Trigger: CAAATGTACTTCCTGGGCCCAAAGAGGGAGATTTGG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGAGAGGATGACTAAGTaGAAGGCTACGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWERMTK*KATCSR
Trigger: CCTGGAGCACGTAGCCTTCCACTTAGTCATCCTCTC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAAGTTCCAGTCCATTTaGCAGAAGGTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENKFQSI*QKVALL
Trigger: CAGCAGAGCCACCTTCTGCCAAATGGACTGGAACTT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGAATGCGGCATGATGTaGGAGTTCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFECGMM*EFSGEV
Trigger: CACCTCCCCAGAGAACTCTCACATCATGCCGCATTC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGGACAGAATGCGGCATaGTGTGAGAGTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFGQNAA*CESSLG
Trigger: CCCCAGAGAACTCTCACATCATGCCGCATTCTGTCC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGGGACAGAATGCGGCATaGTGTGAGAGTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGGQNAA*CESSLG
Trigger: CCCCAGAGAACTCTCACATCATGCCGCATTCTGTCC...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTGCTGACACAGAGTTCTaGTGTCACCAGATGCTTAAG +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFADTEF*CHQMLK
Trigger: CTTAAGCATCTGGTGACATCAGAACTCTGTGTCAGC...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGATGCTGGAGGTAGGCTaGCAGGAATTAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGMLEVG*QELEGG
Trigger: CCCACCCTCTAATTCCTGTCAGCCTACCTCCAGCAT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGATGGACAACCCATTCTaGTGGACCGGGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKMDNPF*WTGILS
Trigger: TGACAGAATCCCGGTCCATCAGAATGGGTTGTCCAT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGATGGACAACCCATTCTaGTGGACCGGGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWMDNPF*WTGILS
Trigger: TGACAGAATCCCGGTCCATCAGAATGGGTTGTCCAT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAGATGGTTGAGAGGATaGCTAAGTGGAAGGCTACGT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENRWLRG*LSGRLR
Trigger: ACGTAGCCTTCCACTTAGTCATCCTCTCAACCATCT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGGCAGTGGTTGTCCATaGCCAGTTAGAGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKGSGCP*PVRESL
Trigger: CAAACTCTCTCTAACTGGGCATGGACAACCACTGCC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTTTCAGCATCTGTTCTaGCGCCACTGCGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGFQHLF*RHCGQP
Trigger: AGGCTGACCGCAGTGGCGGCAGAACAGATGCTGAAA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGGGACTCTGAACTTGTaGTGCTGCTGCCATATTTGC +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKGTLNL*CCCHIC
Trigger: GCAAATATGGCAGCAGCAGCACAAGTTCAGAGTCCC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGGGACTCTGAACTTGTaGTGCTGCTGCCATATTTGC +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWGTLNL*CCCHIC
Trigger: GCAAATATGGCAGCAGCAGCACAAGTTCAGAGTCCC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTGGACACGCTGCTGCTaGGATGTGATGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFWTRCC*DVMMGD
Trigger: GTCACCCATCATCACATCGCAGCAGCAGCGTGTCCA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGGCACGAGAGGCGCTCTaGAGAGGAACGCACAAAAGT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGAREAL*RGTHKS
Trigger: ACTTTTGTGCGTTCCTCTCCAGAGCGCCTCTCGTGC...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCCGCCGGCACTGCCATaGTCACATATAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFPPALP*SHIRGN
Trigger: GTTTCCCCTTATATGTGACCATGGCAGTGCCGGCGG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCCAGCCGCTTCAGCTTaGTGTAGACCGTATGCAAGC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFPAASA*CRPYAS
Trigger: GCTTGCATACGGTCTACACCAAGCTGAAGCGGCTGG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTGTCAGACCTGTTGGTaGAATTATCCCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGCQTCW*NYPRRH
Trigger: ATGTCTCCTGGGATAATTCCACCAACAGGTCTGACA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611519.4
ENST00000613252.5
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGCTGTCTCTTGCGGTTaGTGTAGAAAGCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFAVSCG*CRKRGL
Trigger: GAGACCCCGCTTTCTACACCAACCGCAAGAGACAGC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGAGGAGATGGAAAACCTaGAGGCAGTGGTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWRRWKT*RQWLSM
Trigger: CATGGACAACCACTGCCTCCAGGTTTTCCATCTCCT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTCAGAAGAGTCTCGATaGAAGACAGTCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSEESR*KTVHQE
Trigger: TTCCTGATGGACTGTCTTCCATCGAGACTCTTCTGA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTCACTCAGCGCTACATaGTATTGGACTGGTACATCA +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSLSAT*YWTGTS
Trigger: TGATGTACCAGTCCAATACCATGTAGCGCTGAGTGA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCGGGGTCTCATCTGTTaGTGGAATTATCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWRGLIC*WNYPRR
Trigger: TCTCCTGGGATAATTCCACCAACAGATGAGACCCCG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTGTCTCAACTCTGGATaGGGGACTCTGAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWCLNSG*GTLNLC
Trigger: GCACAAGTTCAGAGTCCCCCATCCAGAGTTGAGACA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCTGATGTCTCAACTCTaGATGGGGGACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENLMSQL*MGDSEL
Trigger: AAGTTCAGAGTCCCCCATCCAGAGTTGAGACATCAG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAAGCCCATCAGCATCTaGTTCATGGACAACCCATTC +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENKPISI*FMDNPF
Trigger: GAATGGGTTGTCCATGAACCAGATGCTGATGGGCTT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTTATCCCAGGAGACATaGGACCAGGGACAGAATGCG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFLSQET*DQGQNA
Trigger: CGCATTCTGTCCCTGGTCTCATGTCTCCTGGGATAA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTAGTCATTTAAGACCCTaGGACTATCTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSHLRP*DYLLKL
Trigger: CAGCTTCAACAGATAGTCTCAGGGTCTTAAATGACT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGCTGACACAGAGTTCTaGTGTCACCAGATGCTTAAG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWADTEF*CHQMLK
Trigger: CTTAAGCATCTGGTGACATCAGAACTCTGTGTCAGC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATTCCAGTCCGACACTTaGATTCATGTCCCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKFQSDT*IHVPVF
Trigger: GAAAACGGGGACATGAATTCAAGTGTCGGACTGGAA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATATTTGCAATGGTGCTaGGGTGGTTCATCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKYLQWC*GGSSGS
Trigger: TGAGCCAGATGAACCACCTCAGCACCATTGCAAATA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCCCGTTTTCAGAGTCTaGTCCATGTTGGTTATTACT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGPVFRV*SMLVIT
Trigger: AGTAATAACCAACATGGAGCAGACTCTGAAAACGGG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611519.4
ENST00000613252.5
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAGTCTGGGTAACCACTaGTACAAGAGTCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENSLGNH*YKSLLM
Trigger: CATCAAGAGACTCTTGTAGCAGTGGTTACCCAGACT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATCTGTTCCAAGGGCTTaGATAGAGCGCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSVPRA*IERKCG
Trigger: ACCACATTTGCGCTCTATGCAAGCCCTTGGAACAGA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATGCTGCTGCCATATTTaGAATGGTGCTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKCCCHI*NGAEVV
Trigger: AACCACCTCAGCACCATTGCAAATATGGCAGCAGCA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGATGTGAGAGTTCTCTaGGGAGGTGACACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWDVRVL*GGDTLS
Trigger: ACTCAAAGTGTCACCTCCCCAGAGAACTCTCACATC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTGTCAGACCTGTTGGTaGAATTATCCCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENCQTCW*NYPRRH
Trigger: ATGTCTCCTGGGATAATTCCACCAACAGGTCTGACA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
3UTR CAA 72 bp TCTGTAAGTCTGGGTAACCACTGCTACAAGAGTCTCTaGATGTGCTCAGATACAGAATTTTCAGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SVSLGNHCYKSL*MCSDTEFSEEE
Trigger: TTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAGTGGTTACCCAGACTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTGGACCTGTTTCTCTTaGGCTCTGGCATTATCTATG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWWTCFS*ALALSM
Trigger: CATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATGGACCTGTTTCTCTTaGGCTCTGGCATTATCTATG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKWTCFS*ALALSM
Trigger: CATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTGGACCTGTTTCTCTTaGGCTCTGGCATTATCTATG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKWTCFS*ALALSM
Trigger: CATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCTCAGGTCTCTGGTATaGACCACAGGTGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWLRSLV*TTGENQ
Trigger: TTGATTTTCACCTGTGGTTCATACCAGAGACCTGAG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCTCAGGTCTCTGGTATaGACCACAGGTGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKLRSLV*TTGENQ
Trigger: TTGATTTTCACCTGTGGTTCATACCAGAGACCTGAG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGCTACAAGAGTCTCTTaGTGTGCTCAGATACAGAAT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENATRVS*CAQIQN
Trigger: ATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTACAAATAAAAGTGGCTaGCACAGAGTTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGTNKSG*HRVLMS
Trigger: TGACATCAGAACTCTGTGTCAGCCACTTTTATTTGT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTACGTGGTTCTCACATTaGAACCAGGCTCAAATAACT +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFTWFSH*NQAQIT
Trigger: AGTTATTTGAGCCTGGTTTCAATGTGAGAACCACGT...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTAATATGCATCCTTTTTaGCTCATGTCCCATGTCATG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGNMHPF*LMSHVM
Trigger: CATGACATGGGACATGAGTCAAAAAGGATGCATATT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTACTGCTGCCGACACTTaGATTCATGTCCCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFTAADT*IHVPVF
Trigger: GAAAACGGGGACATGAATTCAAGTGTCGGCAGCAGT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTCAGATCCACCATTTTaGACTCATTATTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFSDPPF*THYSEG
Trigger: CCCCTCAGAATAATGAGTGCAAAATGGTGGATCTGA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGGCAGTGGTTGTCCATaGCCAGTTAGAGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFGSGCP*PVRESL
Trigger: CAAACTCTCTCTAACTGGGCATGGACAACCACTGCC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTGTTCCATAGCCAACTaGTTCTCAAGTGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENCSIAN*FSSVSL
Trigger: AAGGGAAACACTTGAGAAGCAGTTGGCTATGGAACA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTAACTCAAGTGCTTCCTaGAATTTTCTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGNSSAS*NFLFAF
Trigger: GAAGGCAAAGAGAAAATTGCAGGAAGCACTTGAGTT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGAGTCTGGGTAACCACTaGTACAAGAGTCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWSLGNH*YKSLLM
Trigger: CATCAAGAGACTCTTGTAGCAGTGGTTACCCAGACT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCATTCCAAGTGTTCTTaGTGGTTTCTGGAGGACATA +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENHSKCS*WFLEDI
Trigger: TATGTCCTCCAGAAACCAGCAAGAACACTTGGAATG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTCTGGTGTTTTGATTTaGTGTTCAGCCACAATCCAT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSGVLI*CSATIH
Trigger: ATGGATTGTGGCTGAACAGCAAATCAAAACACCAGA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTAAACAGGTGACTCTATaGCAGGAGCAGAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFKQVTL*QEQSNG
Trigger: GCCATTGCTCTGCTCCTGGCATAGAGTCACCTGTTT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCATGTTGGTTATTACTaGCATGATAGTTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGHVGYY*HDSCSW
Trigger: CCATGAGCAACTATCATGCCAGTAATAACCAACATG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611519.4
ENST00000613252.5
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTAGGAGATGGAAAACCTaGAGGCAGTGGTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFRRWKT*RQWLSM
Trigger: CATGGACAACCACTGCCTCCAGGTTTTCCATCTCCT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTCAGAAGAGTCTCGATaGAAGACAGTCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKSEESR*KTVHQE
Trigger: TTCCTGATGGACTGTCTTCCATCGAGACTCTTCTGA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTCAGAAGAGTCTCGATaGAAGACAGTCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWSEESR*KTVHQE
Trigger: TTCCTGATGGACTGTCTTCCATCGAGACTCTTCTGA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTCACTCAGCGCTACATaGTATTGGACTGGTACATCA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWSLSAT*YWTGTS
Trigger: TGATGTACCAGTCCAATACCATGTAGCGCTGAGTGA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCCAGGAGCAGAGCAATaGCTGATTCTACTACATATG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKPGAEQ*LILLHM
Trigger: CATATGTAGTAGAATCAGCCATTGCTCTGCTCCTGG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGTCTCAACTCTGGATaGGGGACTCTGAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGCLNSG*GTLNLC
Trigger: GCACAAGTTCAGAGTCCCCCATCCAGAGTTGAGACA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATCAGCATCTGGTTCATaGACAACCCATTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSASGS*TTHSDG
Trigger: TCCATCAGAATGGGTTGTCCATGAACCAGATGCTGA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTCAGCATCTGGTTCATaGACAACCCATTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWSASGS*TTHSDG
Trigger: TCCATCAGAATGGGTTGTCCATGAACCAGATGCTGA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAAGTCATTTAAGACCCTaGGACTATCTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSHLRP*DYLLKL
Trigger: CAGCTTCAACAGATAGTCTCAGGGTCTTAAATGACT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGAGTCATTTAAGACCCTaGGACTATCTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWSHLRP*DYLLKL
Trigger: CAGCTTCAACAGATAGTCTCAGGGTCTTAAATGACT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCCCATGACGAATGTCTaGCTGCAAAGTTCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWPMTNV*LQSSFL
Trigger: TAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACCCATGACGAATGTCTaGCTGCAAAGTTCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKPMTNV*LQSSFL
Trigger: TAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGCTACAAGAGTCTCTTaGTGTGCTCAGATACAGAAT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKATRVS*CAQIQN
Trigger: ATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAACGTGGTTCTCACATTaGAACCAGGCTCAAATAACT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKTWFSH*NQAQIT
Trigger: AGTTATTTGAGCCTGGTTTCAATGTGAGAACCACGT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGACGTGGTTCTCACATTaGAACCAGGCTCAAATAACT +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWTWFSH*NQAQIT
Trigger: AGTTATTTGAGCCTGGTTTCAATGTGAGAACCACGT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCCCTGGCAAGTACATTaGTCAAAGATTGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFPWQVH*SKIERG
Trigger: TCCCCTCTCAATCTTTGATCAATGTACTTGCCAGGG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTATTTGCAATGGTGCTaGGGTGGTTCATCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGYLQWC*GGSSGS
Trigger: TGAGCCAGATGAACCACCTCAGCACCATTGCAAATA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR TCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAATATGCATCCTTTTTaGCTCATGTCCCATGTCATG +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENNMHPF*LMSHVM
Trigger: CATGACATGGGACATGAGTCAAAAAGGATGCATATT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTCAGATCCACCATTTTaGACTCATTATTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWSDPPF*THYSEG
Trigger: CCCCTCAGAATAATGAGTGCAAAATGGTGGATCTGA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCCCGTTTTCAGAGTCTaGTCCATGTTGGTTATTACT +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWPVFRV*SMLVIT
Trigger: AGTAATAACCAACATGGAGCAGACTCTGAAAACGGG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTGTTCCATAGCCAACTaGTTCTCAAGTGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWCSIAN*FSSVSL
Trigger: AAGGGAAACACTTGAGAAGCAGTTGGCTATGGAACA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTAACTCAAGTGCTTCCTaGAATTTTCTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFNSSAS*NFLFAF
Trigger: GAAGGCAAAGAGAAAATTGCAGGAAGCACTTGAGTT...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCGTCTCAAACTCAAGTaGTTCCTGCAATTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENRLKLK*FLQFSL
Trigger: AAGAGAAAATTGCAGGAAGCACTTGAGTTTGAGACG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCATTCCAAGTGTTCTTaGTGGTTTCTGGAGGACATA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWHSKCS*WFLEDI
Trigger: TATGTCCTCCAGAAACCAGCAAGAACACTTGGAATG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTTCAAGAATCCTCTATaGCCCCTACAAGTTCATTCG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWFKNPL*PLQVHS
Trigger: CGAATGAACTTGTAGGGGGCATAGAGGATTCTTGAA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTATTTACATGCCTGCATaGGTTAAAACCAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGIYMPA*VKTRKT
Trigger: TGTCTTTCTGGTTTTAACGCATGCAGGCATGTAAAT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTCTGTTCCAAGGGCTTaGATAGAGCGCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSVPRA*IERKCG
Trigger: ACCACATTTGCGCTCTATGCAAGCCCTTGGAACAGA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGCTGCTGCCATATTTaGAATGGTGCTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGCCCHI*NGAEVV
Trigger: AACCACCTCAGCACCATTGCAAATATGGCAGCAGCA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAACTCTGAACTTGTGCTaGTGCTGCCATATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKTLNLC*CCHICN
Trigger: ATTGCAAATATGGCAGCAGCAGCACAAGTTCAGAGT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGACTCTGAACTTGTGCTaGTGCTGCCATATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWTLNLC*CCHICN
Trigger: ATTGCAAATATGGCAGCAGCAGCACAAGTTCAGAGT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGATGTGAGAGTTCTCTaGGGAGGTGACACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFDVRVL*GGDTLS
Trigger: ACTCAAAGTGTCACCTCCCCAGAGAACTCTCACATC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTGCTGTCAGACCTGTTaGTGGAATTATCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFCCQTC*WNYPRR
Trigger: TCTCCTGGGATAATTCCACCAACAGGTCTGACAGCA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTGTTTCTCTTGAGCTCTaGCATTATCTATGGCAACTT +
Preference number: 4 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFVSLEL*HYLWQL
Trigger: AAGTTGCCATAGATAATGCCAGAGCTCAAGAGAAAC...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAAGCGCTACATGGTATTaGACTGGTACATCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSATWY*TGTSRF
Trigger: AAACCTTGATGTACCAGTCCAATACCATGTAGCGCT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCTGATGTCTCAACTCTaGATGGGGGACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGLMSQL*MGDSEL
Trigger: AAGTTCAGAGTCCCCCATCCAGAGTTGAGACATCAG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTAAGCCCATCAGCATCTaGTTCATGGACAACCCATTC +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFKPISI*FMDNPF
Trigger: GAATGGGTTGTCCATGAACCAGATGCTGATGGGCTT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCCAAATCTCCCTCTTTaGGCCCAGGAAGTACATTTG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFPNLPL*AQEVHL
Trigger: CAAATGTACTTCCTGGGCCCAAAGAGGGAGATTTGG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGGACCTGTTTCTCTTaGGCTCTGGCATTATCTATG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGWTCFS*ALALSM
Trigger: CATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCTCAGGTCTCTGGTATaGACCACAGGTGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFLRSLV*TTGENQ
Trigger: TTGATTTTCACCTGTGGTTCATACCAGAGACCTGAG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAACAAATAAAAGTGGCTaGCACAGAGTTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKTNKSG*HRVLMS
Trigger: TGACATCAGAACTCTGTGTCAGCCACTTTTATTTGT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGACAAATAAAAGTGGCTaGCACAGAGTTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWTNKSG*HRVLMS
Trigger: TGACATCAGAACTCTGTGTCAGCCACTTTTATTTGT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGAACTCAAGTGCTTCCTaGAATTTTCTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWNSSAS*NFLFAF
Trigger: GAAGGCAAAGAGAAAATTGCAGGAAGCACTTGAGTT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGAACTCAAGTGCTTCCTaGAATTTTCTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKNSSAS*NFLFAF
Trigger: GAAGGCAAAGAGAAAATTGCAGGAAGCACTTGAGTT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCGTCTCAAACTCAAGTaGTTCCTGCAATTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKRLKLK*FLQFSL
Trigger: AAGAGAAAATTGCAGGAAGCACTTGAGTTTGAGACG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTAAGAGTCTCTTGATGTaGTCAGATACAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGKSLLM*SDTEFS
Trigger: TGAAAATTCTGTATCTGAGCACATCAAGAGACTCTT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACATTTACATGCCTGCATaGGTTAAAACCAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: QTFSGLWYEPQVKINGENIYMPA*VKTRKT
Trigger: TGTCTTTCTGGTTTTAACGCATGCAGGCATGTAAAT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTCTGGTGTTTTGATTTaGTGTTCAGCCACAATCCAT +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKSGVLI*CSATIH
Trigger: ATGGATTGTGGCTGAACAGCAAATCAAAACACCAGA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTTACTTCCAGTTATCTaGACGAAAGTGAAAACACAT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGLLPVI*TKVKTH
Trigger: ATGTGTTTTCACTTTCGTGCAGATAACTGGAAGTAA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCTGAACTTGTGCTGCTaGTGCCATATTTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGLNLCC*CHICNG
Trigger: ACCATTGCAAATATGGCAGCAGCAGCACAAGTTCAG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCTGAACTTGTGCTGCTaGTGCCATATTTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFLNLCC*CHICNG
Trigger: ACCATTGCAAATATGGCAGCAGCAGCACAAGTTCAG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGTCAGACCTGTTGGTaGAATTATCCCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGCQTCW*NYPRRH
Trigger: ATGTCTCCTGGGATAATTCCACCAACAGGTCTGACA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611519.4
ENST00000613252.5
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCATGTTGGTTATTACTaGCATGATAGTTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKHVGYY*HDSCSW
Trigger: CCATGAGCAACTATCATGCCAGTAATAACCAACATG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611519.4
ENST00000613252.5
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCATGTTGGTTATTACTaGCATGATAGTTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWHVGYY*HDSCSW
Trigger: CCATGAGCAACTATCATGCCAGTAATAACCAACATG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGTTTCTCTTGAGCTCTaGCATTATCTATGGCAACTT +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWVSLEL*HYLWQL
Trigger: AAGTTGCCATAGATAATGCCAGAGCTCAAGAGAAAC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTCCAAGTGTTCTTGCTaGTTTCTGGAGGACATAATT +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKSKCSC*FLEDII
Trigger: AATTATGTCCTCCAGAAACCAGCAAGAACACTTGGA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATCCAAGTGTTCTTGCTaGTTTCTGGAGGACATAATT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSKCSC*FLEDII
Trigger: AATTATGTCCTCCAGAAACCAGCAAGAACACTTGGA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTCACTCAGCGCTACATaGTATTGGACTGGTACATCA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFSLSAT*YWTGTS
Trigger: TGATGTACCAGTCCAATACCATGTAGCGCTGAGTGA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTCAAACAACAAAAGGTaGTTATGGAAGAACTATGCT +
Preference number: 4 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSNNKR*LWKNYA
Trigger: AGCATAGTTCTTCCATAACCACCTTTTGTTGTTTGA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGGTCTCATCTGTTGGTaGAATTATCCCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFGLICW*NYPRRH
Trigger: ATGTCTCCTGGGATAATTCCACCAACAGATGAGACC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGAGTCATTTAAGACCCTaGGACTATCTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGSHLRP*DYLLKL
Trigger: CAGCTTCAACAGATAGTCTCAGGGTCTTAAATGACT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGGCTACAAGAGTCTCTTaGTGTGCTCAGATACAGAAT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGATRVS*CAQIQN
Trigger: ATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGC...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAATATTTCTGGTGTTTTaGTTTGCTGTTCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKIFLVF*FAVQPQ
Trigger: TTGTGGCTGAACAGCAAATCAAAACACCAGAAATAT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTCAGATCCACCATTTTaGACTCATTATTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFSDPPF*THYSEG
Trigger: CCCCTCAGAATAATGAGTGCAAAATGGTGGATCTGA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGTTCCATAGCCAACTaGTTCTCAAGTGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGCSIAN*FSSVSL
Trigger: AAGGGAAACACTTGAGAAGCAGTTGGCTATGGAACA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTGTTCCATAGCCAACTaGTTCTCAAGTGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFCSIAN*FSSVSL
Trigger: AAGGGAAACACTTGAGAAGCAGTTGGCTATGGAACA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCATTCCAAGTGTTCTTaGTGGTTTCTGGAGGACATA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFHSKCS*WFLEDI
Trigger: TATGTCCTCCAGAAACCAGCAAGAACACTTGGAATG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTTCAAGAATCCTCTATaGCCCCTACAAGTTCATTCG +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGFKNPL*PLQVHS
Trigger: CGAATGAACTTGTAGGGGGCATAGAGGATTCTTGAA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTTCAAGAATCCTCTATaGCCCCTACAAGTTCATTCG +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFFKNPL*PLQVHS
Trigger: CGAATGAACTTGTAGGGGGCATAGAGGATTCTTGAA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGTAATAAGCACTGTTTaGCGCTTTACTTCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SWLIVSYTKELCSSIARKVISTV*RFTSSY
Trigger: ATAACTGGAAGTAAAGCGGCAAACAGTGCTTATTAC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGTAATAAGCACTGTTTaGCGCTTTACTTCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKVISTV*RFTSSY
Trigger: ATAACTGGAAGTAAAGCGGCAAACAGTGCTTATTAC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGCCTCTTTTGAACTATaGCTCTATTCTTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWASFEL*LYSFVP
Trigger: TGGAACAAAAGAATAGAGCCATAGTTCAAAAGAGGC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTAGCGCTACATGGTATTaGACTGGTACATCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFSATWY*TGTSRF
Trigger: AAACCTTGATGTACCAGTCCAATACCATGTAGCGCT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGAAAGATGAACTTAGCTaGCTAATAGTGAGCTACACA +
Preference number: 4 (lower is better)
Translates to: SELSHDECLTAKFFSITWKDELS*LIVSYT
Trigger: TGTGTAGCTCACTATTAGCCAGCTAAGTTCATCTTT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCGTCTCAAACTCAAGTaGTTCCTGCAATTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGRLKLK*FLQFSL
Trigger: AAGAGAAAATTGCAGGAAGCACTTGAGTTTGAGACG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCGTCTCAAACTCAAGTaGTTCCTGCAATTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFRLKLK*FLQFSL
Trigger: AAGAGAAAATTGCAGGAAGCACTTGAGTTTGAGACG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAAAGAGTCTCTTGATGTaGTCAGATACAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKKSLLM*SDTEFS
Trigger: TGAAAATTCTGTATCTGAGCACATCAAGAGACTCTT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR GCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATTACTTCCAGTTATCTaGACGAAAGTGAAAACACAT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKLLPVI*TKVKTH
Trigger: ATGTGTTTTCACTTTCGTGCAGATAACTGGAAGTAA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGTTTCTCTTGAGCTCTaGCATTATCTATGGCAACTT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFVSLEL*HYLWQL
Trigger: AAGTTGCCATAGATAATGCCAGAGCTCAAGAGAAAC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATCAAACAACAAAAGGTaGTTATGGAAGAACTATGCT +
Preference number: 4 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKSNNKR*LWKNYA
Trigger: AGCATAGTTCTTCCATAACCACCTTTTGTTGTTTGA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTATATTTCTGGTGTTTTaGTTTGCTGTTCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFIFLVF*FAVQPQ
Trigger: TTGTGGCTGAACAGCAAATCAAAACACCAGAAATAT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR TCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGATATTTCTGGTGTTTTaGTTTGCTGTTCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGIFLVF*FAVQPQ
Trigger: TTGTGGCTGAACAGCAAATCAAAACACCAGAAATAT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGTAATAAGCACTGTTTaGCGCTTTACTTCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFVISTV*RFTSSY
Trigger: ATAACTGGAAGTAAAGCGGCAAACAGTGCTTATTAC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGCCTCTTTTGAACTATaGCTCTATTCTTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFASFEL*LYSFVP
Trigger: TGGAACAAAAGAATAGAGCCATAGTTCAAAAGAGGC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGGCCTCTTTTGAACTATaGCTCTATTCTTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGASFEL*LYSFVP
Trigger: TGGAACAAAAGAATAGAGCCATAGTTCAAAAGAGGC...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CCA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGAAAGATGAACTTAGCTaGCTAATAGTGAGCTACACA +
Preference number: 4 (lower is better)
Translates to: LVYAKTQISKPTCITKTGKDELS*LIVSYT
Trigger: TGTGTAGCTCACTATTAGCCAGCTAAGTTCATCTTT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR GCA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTAAGAGTCTCTTGATGTaGTCAGATACAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFKSLLM*SDTEFS
Trigger: TGAAAATTCTGTATCTGAGCACATCAAGAGACTCTT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 90 bp GCTCCGGGCGGAACAGAGTTGGCCCAGAGGACGCCGGGGGTCCGATaGAAGGAGCCGGAGACGAAGTCGCCGAAGAGGTGGAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: APGGTELAQRTPGVR*KEPETKSPKRWRWW
Trigger: CCACCACCTCCACCTCTTCGGCGACTTCGTCTCCGGCTCCTTCCATCGGACCCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 90 bp CGGGTTTCCCGGGGAGGGGGCCGCAGCTGCTGCTGCTACTGCTGCTaGTGCTACTACTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RVSRGGGRSCCCYCC*CYYCCCCCCCYCCC
Trigger: GCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 90 bp GTTTCCCGGGGAGGGGGCCGCAGCTGCTGCTGCTACTGCTGCTGCTaGTACTACTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VSRGGGRSCCCYCCC*YYCCCCCCCYCCCC
Trigger: GCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 90 bp ACACGGGTTTCCCGGGGAGGGGGCCGCAGCTGCTGCTGCTACTGCTaGTGCTGCTACTACTGCTGCTGCTGCTGCTGCTGCTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: TRVSRGGGRSCCCYC*CCYYCCCCCCCYCC
Trigger: GCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAACCCGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 90 bp GGGTTGAGTACACGGGTTTCCCGGGGAGGGGGCCGCAGCTGCTGCTaGTACTGCTGCTGCTGCTACTACTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GLSTRVSRGGGRSCC*YCCCCYYCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAACCCGTGTACTCAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 90 bp AGTACACGGGTTTCCCGGGGAGGGGGCCGCAGCTGCTGCTGCTACTaGTGCTGCTGCTACTACTGCTGCTGCTGCTGCTGCTGCTACTGC +
Preference number: 5 (lower is better)
Translates to: STRVSRGGGRSCCCY*CCCYYCCCCCCCYC
Trigger: GCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAACCCGTGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 90 bp CAGAAGAGCTCTCAGTCCGAGCAGGGGAGCTGGACACGCTGCTGCTaGGATGTGATGATGGGTGACTGCCAGGCCTTCTCCCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: QKSSQSEQGSWTRCC*DVMMGDCQAFSPPP
Trigger: TGGAGGAGGGGAGAAGGCCTGGCAGTCACCCATCATCACATCGCAGCAGCAGCGTGTCCAGCTCCCCTGCTCGGACTGAGAGCTCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS GCA 90 bp TGTCAGAAGAGCTCTCAGTCCGAGCAGGGGAGCTGGACACGCTGCTaGTGCGATGTGATGATGGGTGACTGCCAGGCCTTCTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: CQKSSQSEQGSWTRC*CDVMMGDCQAFSPP
Trigger: AGGAGGGGAGAAGGCCTGGCAGTCACCCATCATCACATCGCAGCAGCAGCGTGTCCAGCTCCCCTGCTCGGACTGAGAGCTCTTCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS GCA 90 bp GCTCTGCTGAAGATGGTTGAGAGGATGACTAAGTGGAAGGCTACGTaGTCCAGGCATGCGGGGGTGGGTTATAGAGGCCTGAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: ALLKMVERMTKWKAT*SRHAGVGYRGLRSL
Trigger: CAGGGACCTCAGGCCTCTATAACCCACCCCCGCATGCCTGGAGCACGTAGCCTTCCACTTAGTCATCCTCTCAACCATCTTCAGCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS CCA 90 bp GGTAATAAAGAGCGAGCGCAAGAGGGGCGAGCACGAGAGGCGCTCTaGAGAGGAACGCACAAAAGTGTCCCGCAAGTCGAAATGCGAGTC +
Preference number: 5 (lower is better)
Translates to: GNKERAQEGRAREAL*RGTHKSVPQVEMRV
Trigger: GACTCGCATTTCGACTTGCGGGACACTTTTGTGCGTTCCTCTCCAGAGCGCCTCTCGTGCTCGCCCCTCTTGCGCTCGCTCTTTATTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS CCA 90 bp TGGCAGAAGGTGGCTCTGCTGAAGATGGTTGAGAGGATGACTAAGTaGAAGGCTACGTGCTCCAGGCATGCGGGGGTGGGTTATAGAGGC +
Preference number: 5 (lower is better)
Translates to: WQKVALLKMVERMTK*KATCSRHAGVGYRG
Trigger: GCCTCTATAACCCACCCCCGCATGCCTGGAGCACGTAGCCTTCCACTTAGTCATCCTCTCAACCATCTTCAGCAGAGCCACCTTCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCCGGGCGGAACAGAGTaGGCCCAGAGGACGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENPGGTE*AQRTPG
Trigger: CCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCGG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 90 bp AGACATGAGACCAGGGACAGAATGCGGCATGATGTGAGAGTTCTCTaGGGAGGTGACACTTTGAGTCCTCTTAGGAGGCCTTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RHETRDRMRHDVRVL*GGDTLSPLRRPSRS
Trigger: AGACCTGGAAGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCAGAGAACTCTCACATCATGCCGCATTCTGTCCCTGGTCTCATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCCGGGCGGAACAGAGTaGGCCCAGAGGACGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWPGGTE*AQRTPG
Trigger: CCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCGG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACCGGGCGGAACAGAGTaGGCCCAGAGGACGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKPGGTE*AQRTPG
Trigger: CCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCGG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCCGGGCGGAACAGAGTaGGCCCAGAGGACGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKPGGTE*AQRTPG
Trigger: CCCCGGCGTCCTCTGGGCCAACTCTGTTCCGCCCGG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTAGGTTGGGGTTGCAGTaGCTGCCACCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFRLGLQ*LPPPPP
Trigger: CGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCT...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGAGGTTGGGGTTGCAGTaGCTGCCACCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWRLGLQ*LPPPPP
Trigger: CGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAAGGTTGGGGTTGCAGTaGCTGCCACCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKRLGLQ*LPPPPP
Trigger: CGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCT...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGCCGCCAGGTTGGGGTaGCAGTTGCTGCCACCGCCG +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKAARLG*QLLPPP
Trigger: CGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGCCGCCAGGTTGGGGTaGCAGTTGCTGCCACCGCCG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWAARLG*QLLPPP
Trigger: CGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGCCGCCAGGTTGGGGTaGCAGTTGCTGCCACCGCCG +
Preference number: 5 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKAARLG*QLLPPP
Trigger: CGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCTCGCGGCCGCCAGGTaGGGGTTGCAGTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENLAAAR*GLQLLP
Trigger: TGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCCACTGGGGACGGGGTaGAGTACACGGGTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGPLGTG*STRVSR
Trigger: CCGGGAAACCCGTGTACTCAACCCCGTCCCCAGTGG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS GCA 90 bp GTCTTCCATCTTGTATTGTCCTTTCAGCATCTGTTCTGCCGCCACTaGGGTCAGCCTCTATCTCTGGGGTCAGAGAGTCATTTAAGACCC +
Preference number: 5 (lower is better)
Translates to: VFHLVLSFQHLFCRH*GQPLSLGSESHLRP
Trigger: GGGTCTTAAATGACTCTCTGACCCCAGAGATAGAGGCTGACCGCAGTGGCGGCAGAACAGATGCTGAAAGGACAATACAAGATGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGGGGAGGGTCGGCTGTaGTTGTGTGGGTCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGGEGRL*LCGSRS
Trigger: AGAGCGAGACCCACACAACAACAGCCGACCCTCCCC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCTCGCGGCCGCCAGGTaGGGGTTGCAGTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWLAAAR*GLQLLP
Trigger: TGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCCACTGGGGACGGGGTaGAGTACACGGGTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENPLGTG*STRVSR
Trigger: CCGGGAAACCCGTGTACTCAACCCCGTCCCCAGTGG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 90 bp GCCCAGGAAGTACATTTGGTGATAAGCCCATCAGCATCTGGTTCATaGACAACCCATTCTGATGGACCGGGATTCTGTCAGAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: AQEVHLVISPSASGS*TTHSDGPGFCQKSS
Trigger: AGAGCTCTTCTGACAGAATCCCGGTCCATCAGAATGGGTTGTCCATGAACCAGATGCTGATGGGCTTATCACCAAATGTACTTCCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGAGGGTCGGCTGTTGTaGTGTGGGTCTCGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGEGRLL*CGSRSS
Trigger: GCTAGAGCGAGACCCACACAACAACAGCCGACCCTC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGGGGAGGGTCGGCTGTaGTTGTGTGGGTCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENGEGRL*LCGSRS
Trigger: AGAGCGAGACCCACACAACAACAGCCGACCCTCCCC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTAGGTTGGGGTTGCAGTaGCTGCCACCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFRLGLQ*LPPPPP
Trigger: CGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGCCGCCAGGTTGGGGTaGCAGTTGCTGCCACCGCCG +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFAARLG*QLLPPP
Trigger: CGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCCACTGGGGACGGGGTaGAGTACACGGGTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWPLGTG*STRVSR
Trigger: CCGGGAAACCCGTGTACTCAACCCCGTCCCCAGTGG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 90 bp TCAAATACAGTCTTCCATCTTGTATTGTCCTTTCAGCATCTGTTCTaGCGCCACTGCGGTCAGCCTCTATCTCTGGGGTCAGAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: SNTVFHLVLSFQHLF*RHCGQPLSLGSESH
Trigger: ATGACTCTCTGACCCCAGAGATAGAGGCTGACCGCAGTGGCGGCAGAACAGATGCTGAAAGGACAATACAAGATGGAAGACTGTATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 90 bp TTTTTGACTCATGTCCCATGTCATGACCGGCCAAATCTCCCTCTTTaGGCCCAGGAAGTACATTTGGTGATAAGCCCATCAGCATCTGGT +
Preference number: 5 (lower is better)
Translates to: FLTHVPCHDRPNLPL*AQEVHLVISPSASG
Trigger: ACCAGATGCTGATGGGCTTATCACCAAATGTACTTCCTGGGCCCAAAGAGGGAGATTTGGCCGGTCATGACATGGGACATGAGTCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGGGGGAGGGTCGGCTGTaGTTGTGTGGGTCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKGEGRL*LCGSRS
Trigger: AGAGCGAGACCCACACAACAACAGCCGACCCTCCCC...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTAAGCGAGAGGAAAAGTaGCCACACACCCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFKREEK*PHTPGR
Trigger: CCTCCCGGGGGTGTGTGGCAACTTTTCCTCTCGCTT...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCTCGCGGCCGCCAGGTaGGGGTTGCAGTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFLAAAR*GLQLLP
Trigger: TGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTGGAGGTTTGAAGGACTaGGGCTCTCCCTGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGGGLKD*GSPWQV
Trigger: TACTTGCCAGGGAGAGCCCAAGTCCTTCAAACCTCC...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAAGAGGGTCGGCTGTTGTaGTGTGGGTCTCGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKEGRLL*CGSRSS
Trigger: GCTAGAGCGAGACCCACACAACAACAGCCGACCCTC...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGAAGCGAGAGGAAAAGTaGCCACACACCCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWKREEK*PHTPGR
Trigger: CCTCCCGGGGGTGTGTGGCAACTTTTCCTCTCGCTT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCGAACTTGTTCCACATaGCACACCACCGGCGTGATC +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENRTCST*HTTGVI
Trigger: GATCACGCCGGTGGTGTGCAATGTGGAACAAGTTCG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCCTCAGGATGCGAACTaGTTCCACATTGCACACCAC +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGPQDAN*FHIAHH
Trigger: GTGGTGTGCAATGTGGAACAAGTTCGCATCCTGAGG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTGGGGAGGTGACACTTaGAGTCCTCTTAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENWGGDT*SPLRRP
Trigger: AGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGGAGGTTTGAAGGACTaGGGCTCTCCCTGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWGGLKD*GSPWQV
Trigger: TACTTGCCAGGGAGAGCCCAAGTCCTTCAAACCTCC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGAGGGTCGGCTGTTGTaGTGTGGGTCTCGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFEGRLL*CGSRSS
Trigger: GCTAGAGCGAGACCCACACAACAACAGCCGACCCTC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGAAGCGAGAGGAAAAGTaGCCACACACCCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGKREEK*PHTPGR
Trigger: CCTCCCGGGGGTGTGTGGCAACTTTTCCTCTCGCTT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCGAACTTGTTCCACATaGCACACCACCGGCGTGATC +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWRTCST*HTTGVI
Trigger: GATCACGCCGGTGGTGTGCAATGTGGAACAAGTTCG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCCTCAGGATGCGAACTaGTTCCACATTGCACACCAC +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENPQDAN*FHIAHH
Trigger: GTGGTGTGCAATGTGGAACAAGTTCGCATCCTGAGG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTGGGGAGGTGACACTTaGAGTCCTCTTAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKWGGDT*SPLRRP
Trigger: AGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATGGGGAGGTGACACTTaGAGTCCTCTTAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKWGGDT*SPLRRP
Trigger: AGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTGGGGAGGTGACACTTaGAGTCCTCTTAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWWGGDT*SPLRRP
Trigger: AGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGCGGGGTCTCATCTGTaGGTGGAATTATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWAGSHL*VELSQE
Trigger: CTCCTGGGATAATTCCACCAACAGATGAGACCCCGC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGAAGTTCCAGTCCATTaGGCAGAAGGTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENEVPVH*AEGGSA
Trigger: AGCAGAGCCACCTTCTGCCAAATGGACTGGAACTTC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS-3UTR CAA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTCCAGTTAGAGAGAGTTaGTCAAGGCTGTCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFPVRES*SRLSLA
Trigger: CGCAAGAGACAGCCTTGACAAACTCTCTCTAACTGG...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTCAGCGCTACATGGTATaGGACTGGTACATCAAGGTT +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGQRYMV*DWYIKV
Trigger: AACCTTGATGTACCAGTCCAATACCATGTAGCGCTG...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAATGGGGGACTCTGAACTaGTGCTGCTGCTGCCATATT +
Preference number: 5 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKWGTLN*CCCCHI
Trigger: AATATGGCAGCAGCAGCACAAGTTCAGAGTCCCCCA...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGCGAACTTGTTCCACATaGCACACCACCGGCGTGATC +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGRTCST*HTTGVI
Trigger: GATCACGCCGGTGGTGTGCAATGTGGAACAAGTTCG...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCGAACTTGTTCCACATaGCACACCACCGGCGTGATC +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFRTCST*HTTGVI
Trigger: GATCACGCCGGTGGTGTGCAATGTGGAACAAGTTCG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACGGGTCTCATCGACACTaGAATTCATGTCCCCGTTTT +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENGSHRH*NSCPRF
Trigger: AAAACGGGGACATGAATTCAAGTGTCGATGAGACCC...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611519.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGCCAGTTAGAGAGAGTTaGTCAAGGCTGTCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKPVRES*SRLSLA
Trigger: CGCAAGAGACAGCCTTGACAAACTCTCTCTAACTGG...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTCATTCCAAGTGTTCTaGCTGGTTTCTGGAGGACAT +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGSFQVF*LVSGGH
Trigger: ATGTCCTCCAGAAACCAGCAAGAACACTTGGAATGA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTTCTGTTCCAAGGGCTaGCATAGAGCGCAAATGTGG +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKFCSKG*HRAQMW
Trigger: CCACATTTGCGCTCTATGCAAGCCCTTGGAACAGAA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTTCTGTTCCAAGGGCTaGCATAGAGCGCAAATGTGG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWFCSKG*HRAQMW
Trigger: CCACATTTGCGCTCTATGCAAGCCCTTGGAACAGAA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGCCCAGGAAGTACATTaGGTGATAAGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWAQEVH*VISPSA
Trigger: TGCTGATGGGCTTATCACCAAATGTACTTCCTGGGC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGCCAAATCTCCCTCTTaGGGCCCAGGAAGTACATTT +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWAKSPS*GPGSTF
Trigger: AAATGTACTTCCTGGGCCCAAAGAGGGAGATTTGGC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCCTCAGGATGCGAACTaGTTCCACATTGCACACCAC +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFPQDAN*FHIAHH
Trigger: GTGGTGTGCAATGTGGAACAAGTTCGCATCCTGAGG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CTGCTACAAGAGTCTCTTGATGTGCTCAGATACAGAATTTTCAGAAGAGGAAAACAGCGCTACATGGTATaGGACTGGTACATCAAGGTT +
Preference number: 5 (lower is better)
Translates to: LLQESLDVLRYRIFRRGKQRYMV*DWYIKV
Trigger: AACCTTGATGTACCAGTCCAATACCATGTAGCGCTG...TTTTCCTCTTCTGAAAATTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGCAGCGCTACATGGTATaGGACTGGTACATCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWQRYMV*DWYIKV
Trigger: AACCTTGATGTACCAGTCCAATACCATGTAGCGCTG...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTAACGTGGTTCTCACATaGAAACCAGGCTCAAATAAC +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGNVVLT*KPGSNN
Trigger: GTTATTTGAGCCTGGTTTCAATGTGAGAACCACGTT...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGGTTCCAGTCCGACACTaGAATTCATGTCCCCGTTTT +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWVPVRH*NSCPRF
Trigger: AAAACGGGGACATGAATTCAAGTGTCGGACTGGAAC...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTGGGGGACTCTGAACTaGTGCTGCTGCTGCCATATT +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGWGTLN*CCCCHI
Trigger: AATATGGCAGCAGCAGCACAAGTTCAGAGTCCCCCA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCCAGTTAGAGAGAGTTaGTCAAGGCTGTCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFPVRES*SRLSLA
Trigger: CGCAAGAGACAGCCTTGACAAACTCTCTCTAACTGG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTTGGACCTGTTTCTCTaGAGCTCTGGCATTATCTAT +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENLDLFL*SSGIIY
Trigger: ATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCAA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GAAGCACAGCACATTTTAACTTTATCACTCAGCGCTACATGGTATTGGACTGGTTGTAATAAGCACTGTTaGCCGCTTTACTTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: EAQHILTLSLSATWYWTGCNKHC*PLYFQL
Trigger: TAACTGGAAGTAAAGCGGCAAACAGTGCTTATTACA...ACCAGTCCAATACCATGTAGCGCTGAGTGATAAAGTTAAAATGTGCTGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTTCTGTTCCAAGGGCTaGCATAGAGCGCAAATGTGG +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGFCSKG*HRAQMW
Trigger: CCACATTTGCGCTCTATGCAAGCCCTTGGAACAGAA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACAACGTGGTTCTCACATaGAAACCAGGCTCAAATAAC +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENNVVLT*KPGSNN
Trigger: GTTATTTGAGCCTGGTTTCAATGTGAGAACCACGTT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGGCCCAGGAAGTACATTaGGTGATAAGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGAQEVH*VISPSA
Trigger: TGCTGATGGGCTTATCACCAAATGTACTTCCTGGGC...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613252.5
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTGCCAAATCTCCCTCTTaGGGCCCAGGAAGTACATTT +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFAKSPS*GPGSTF
Trigger: AAATGTACTTCCTGGGCCCAAAGAGGGAGATTTGGC...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTTGGACCTGTTTCTCTaGAGCTCTGGCATTATCTAT +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKLDLFL*SSGIIY
Trigger: ATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCAA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTTGGACCTGTTTCTCTaGAGCTCTGGCATTATCTAT +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWLDLFL*SSGIIY
Trigger: ATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCAA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACATACAGTCTTCCATCTaGTATTGTCCTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENIQSSI*YCPFSI
Trigger: GATGCTGAAAGGACAATACAAGATGGAAGACTGTAT...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTGCTACAAGAGTCTCTaGATGTGCTCAGATACAGAA +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWCYKSL*MCSDTE
Trigger: TTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTGCTACAAGAGTCTCTaGATGTGCTCAGATACAGAA +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKCYKSL*MCSDTE
Trigger: TTCTGTATCTGAGCACATCAAGAGACTCTTGTAGCA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTTCTGGTGTTTTGATTaGCTGTTCAGCCACAATCCA +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKFWCFD*LFSHNP
Trigger: TGGATTGTGGCTGAACAGCAAATCAAAACACCAGAA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTGTAATAAGCACTGTTaGCCGCTTTACTTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFCNKHC*PLYFQL
Trigger: TAACTGGAAGTAAAGCGGCAAACAGTGCTTATTACA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGAACGTGGTTCTCACATaGAAACCAGGCTCAAATAAC +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKNVVLT*KPGSNN
Trigger: GTTATTTGAGCCTGGTTTCAATGTGAGAACCACGTT...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACCAATATGCATCCTTTTaGACTCATGTCCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENQYASF*THVPCH
Trigger: ATGACATGGGACATGAGTCAAAAAGGATGCATATTG...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTATGGCTCTATTCTTTaGTTCCATAGCCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWYGSIL*FHSQLL
Trigger: AAGCAGTTGGCTATGGAACAAAAGAATAGAGCCATA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp AGCTGGCTAATAGTGAGCTACACAAAAGAATTATGTTCCAGTATTGCAAGGAAGTATGGCTCTATTCTTTaGTTCCATAGCCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: SWLIVSYTKELCSSIARKYGSIL*FHSQLL
Trigger: AAGCAGTTGGCTATGGAACAAAAGAATAGAGCCATA...CTTCCTTGCAATACTGGAACATAATTCTTTTGTGTAGCTCACTATTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGATACAGTCTTCCATCTaGTATTGTCCTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWIQSSI*YCPFSI
Trigger: GATGCTGAAAGGACAATACAAGATGGAAGACTGTAT...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTCATTCCAAGTGTTCTaGCTGGTTTCTGGAGGACAT +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFSFQVF*LVSGGH
Trigger: ATGTCCTCCAGAAACCAGCAAGAACACTTGGAATGA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TATCACTCAGCGCTACATGGTATTGGACTGGTACATCAAGGTTTGTTAGGTTTTTATTTCATTGGGTTGTaGTCAACATCCATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: YHSALHGIGLVHQGLLGFYFIGL*STSICW
Trigger: CCAACAAATGGATGTTGACAACAACCCAATGAAATA...AAAACCTAACAAACCTTGATGTACCAGTCCAATACCATGTAGCGCTGAGTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CAAACATTCTCAGGTCTCTGGTATGAACCACAGGTGAAAATCAATGGAGAAAACTATTTCATTGGGTTGTaGTCAACATCCATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QTFSGLWYEPQVKINGENYFIGL*STSICW
Trigger: CCAACAAATGGATGTTGACAACAACCCAATGAAATA...GTTTTCTCCATTGATTTTCACCTGTGGTTCATACCAGAGACCTGAGAATGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTGTAATAAGCACTGTTaGCCGCTTTACTTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWCNKHC*PLYFQL
Trigger: TAACTGGAAGTAAAGCGGCAAACAGTGCTTATTACA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTTGGACCTGTTTCTCTaGAGCTCTGGCATTATCTAT +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGLDLFL*SSGIIY
Trigger: ATAGATAATGCCAGAGCTCAAGAGAAACAGGTCCAA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp TCTGAACTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATGGTATTTCATTGGGTTGTaGTCAACATCCATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: SELSHDECLTAKFFSITWYFIGL*STSICW
Trigger: CCAACAAATGGATGTTGACAACAACCCAATGAAATA...CCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAGTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 90 bp CTTTCCCATGACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATaGATTTCTTCAACAGGAAAGATTCAGTACATGACAGTAGTTTTC +
Preference number: 5 (lower is better)
Translates to: LSHDECLTAKFFSIT*ISSTGKIQYMTVVF
Trigger: GAAAACTACTGTCATGTACTGAATCTTTCCTGTTGAAGAAATCCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTCATGGGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGTATGGCTCTATTCTTTaGTTCCATAGCCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGYGSIL*FHSQLL
Trigger: AAGCAGTTGGCTATGGAACAAAAGAATAGAGCCATA...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTTATGGCTCTATTCTTTaGTTCCATAGCCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFYGSIL*FHSQLL
Trigger: AAGCAGTTGGCTATGGAACAAAAGAATAGAGCCATA...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTATACAGTCTTCCATCTaGTATTGTCCTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFIQSSI*YCPFSI
Trigger: GATGCTGAAAGGACAATACAAGATGGAAGACTGTAT...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS-3UTR CAA 90 bp CTTGTTTATGCCAAAACACAAATTTCCAAACCAACCTGTATAACTAAAACAGGGATACAGTCTTCCATCTaGTATTGTCCTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: LVYAKTQISKPTCITKTGIQSSI*YCPFSI
Trigger: GATGCTGAAAGGACAATACAAGATGGAAGACTGTAT...CCCTGTTTTAGTTATACAGGTTGGTTTGGAAATTTGTGTTTTGGCATAAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS-3UTR CAA 90 bp GTCCAGCAGCAAGTTGCAGTAATTAACTGTAAGAACTTTGATACTTGTACATTTCAATATGCATCCTTTTaGACTCATGTCCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: VQQQVAVINCKNFDTCTFQYASF*THVPCH
Trigger: ATGACATGGGACATGAGTCAAAAAGGATGCATATTG...AAATGTACAAGTATCAAAGTTCTTACAGTTAATTACTGCAACTTGCTGCTGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS CAA 90 bp ATGCCGCCGCCGCCGCCGCCGCTGCCGTTGCTCGCGGCCGCCAGGTaGGGGTTGCAGTTGCTGCCACCGCCGCCGCCGCCACCGCCGCCT +
Preference number: 6 (lower is better)
Translates to: MPPPPPPLPLLAAAR*GLQLLPPPPPPPPP
Trigger: AGGCGGCGGTGGCGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAGCAACGGCAGCGGCGGCGGCGGCGGCGGCAT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 90 bp CCGCCGCCGCTGCCGTTGCTCGCGGCCGCCAGGTTGGGGTTGCAGTaGCTGCCACCGCCGCCGCCGCCACCGCCGCCTCCGTTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: PPPLPLLAAARLGLQ*LPPPPPPPPPPLPL
Trigger: CAGCGGCAACGGAGGCGGCGGTGGCGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAGCAACGGCAGCGGCGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 90 bp ACGCCGCCGCCAGCGCTGATGCCGCCGCCGCCGCCGCCGCTGCCGTaGCTCGCGGCCGCCAGGTTGGGGTTGCAGTTGCTGCCACCGCCG +
Preference number: 6 (lower is better)
Translates to: TPPPALMPPPPPPLP*LAAARLGLQLLPPP
Trigger: CGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAGCAACGGCAGCGGCGGCGGCGGCGGCGGCATCAGCGCTGGCGGCGGCGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 72 bp CTGCCGTTGCTCGCGGCCGCCAGGTTGGGGTTGCAGTaGCTGCCACCGCCGCCGCCGCCACCGCCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: LPLLAAARLGLQ*LPPPPPPPPPP
Trigger: CGGAGGCGGCGGTGGCGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAGCAACGGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp CGTTGCTCGCGGCCGCCAGGTTGGGGTTGCAGTTGCTaGCACCGCCGCCGCCGCCACCGCCGCCTCCGTTGC +
Preference number: 6 (lower is better)
Translates to: RCSRPPGWGCSC*HRRRRHRRLRC
Trigger: GCAACGGAGGCGGCGGTGGCGGCGGCGGCGGTGGCAGCAACTGCAACCCCAACCTGGCGGCCGCGAGCAACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 72 bp CCAGCGCTGATGCCGCCGCCGCCGCCGCCGCTGCCGTaGCTCGCGGCCGCCAGGTTGGGGTTGCAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: PALMPPPPPPLP*LAAARLGLQLL
Trigger: CAGCAACTGCAACCCCAACCTGGCGGCCGCGAGCAACGGCAGCGGCGGCGGCGGCGGCGGCATCAGCGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 72 bp CTGCTACTGCTGCTGCTGCTGCTGCCGGTGCTGGCGTaGATGGGGGTGCTGGAAGCGACGCCGCCGCCAGCG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLPVLA*MGVLEATPPPA
Trigger: CGCTGGCGGCGGCGTCGCTTCCAGCACCCCCATCAACGCCAGCACCGGCAGCAGCAGCAGCAGCAGTAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 90 bp CTGCTGCTGCTGCTACTGCTGCTGCTGCTGCTGCCGGTGCTGGCGTaGATGGGGGTGCTGGAAGCGACGCCGCCGCCAGCGCTGATGCCG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLPVLA*MGVLEATPPPALMP
Trigger: CGGCATCAGCGCTGGCGGCGGCGTCGCTTCCAGCACCCCCATCAACGCCAGCACCGGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp GTTTCCCGGGGAGGGGGCCGCAGCTGCTGCTGCTACTaGTGCTGCTGCTACTACTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VSRGGGRSCCCY*CCCYYCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp ACACGGGTTTCCCGGGGAGGGGGCCGCAGCTGCTGCTaGTACTGCTGCTGCTGCTACTACTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: TRVSRGGGRSCC*YCCCCYYCCCC
Trigger: GCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAACCCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 72 bp GGAACAGAGTTGGCCCAGAGGACGCCGGGGGTCCGATaGAAGGAGCCGGAGACGAAGTCGCCGAAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GTELAQRTPGVR*KEPETKSPKRW
Trigger: CCACCTCTTCGGCGACTTCGTCTCCGGCTCCTTCCATCGGACCCCCGGCGTCCTCTGGGCCAACTCTGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp AGTACACGGGTTTCCCGGGGAGGGGGCCGCAGCTGCTaGTGCTACTGCTGCTGCTGCTACTACTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: STRVSRGGGRSC*CYCCCCYYCCC
Trigger: GCAGCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAACCCGTGTACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp TTGAGTACACGGGTTTCCCGGGGAGGGGGCCGCAGCTaGTGCTGCTACTGCTGCTGCTGCTACTACTGCTGC +
Preference number: 6 (lower is better)
Translates to: LSTRVSRGGGRS*CCYCCCCYYCC
Trigger: GCAGCAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGCGGCCCCCTCCCCGGGAAACCCGTGTACTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp GGAGAGGAACGCACAAAAGTGTCCCGCAAGTCGAAATaGGAGTCCTCTCCGGGGGCTGGGATCGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GEERTKVSRKSK*ESSPGAGIEGW
Trigger: CCAGCCCTCGATCCCAGCCCCCGGAGAGGACTCGCATTTCGACTTGCGGGACACTTTTGTGCGTTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS GCA 72 bp AGCTCTCAGTCCGAGCAGGGGAGCTGGACACGCTGCTaGTGCGATGTGATGATGGGTGACTGCCAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSQSEQGSWTRC*CDVMMGDCQAF
Trigger: GAAGGCCTGGCAGTCACCCATCATCACATCGCAGCAGCAGCGTGTCCAGCTCCCCTGCTCGGACTGAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS CCA 72 bp GAGCGAGCGCAAGAGGGGCGAGCACGAGAGGCGCTCTaGAGAGGAACGCACAAAAGTGTCCCGCAAGTCGAA +
Preference number: 6 (lower is better)
Translates to: ERAQEGRAREAL*RGTHKSVPQVE
Trigger: TTCGACTTGCGGGACACTTTTGTGCGTTCCTCTCCAGAGCGCCTCTCGTGCTCGCCCCTCTTGCGCTCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000620444.4
CDS CAA 72 bp GCGCCCAGTCCCCTCAGGATGCGAACTTGTTCCACATaGCACACCACCGGCGTGATCTCCAGCCGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: APSPLRMRTCST*HTTGVISSRFS
Trigger: GCTGAAGCGGCTGGAGATCACGCCGGTGGTGTGCAATGTGGAACAAGTTCGCATCCTGAGGGGACTGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 72 bp TTCTGTCAGAAGAGCTCTCAGTCCGAGCAGGGGAGCTaGACACGCTGCTGCTGCGATGTGATGATGGGTGAC +
Preference number: 6 (lower is better)
Translates to: FCQKSSQSEQGS*TRCCCDVMMGD
Trigger: GTCACCCATCATCACATCGCAGCAGCAGCGTGTCCAGCTCCCCTGCTCGGACTGAGAGCTCTTCTGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS CCA 72 bp GTGGCTCTGCTGAAGATGGTTGAGAGGATGACTAAGTaGAAGGCTACGTGCTCCAGGCATGCGGGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: VALLKMVERMTK*KATCSRHAGVG
Trigger: ACCCACCCCCGCATGCCTGGAGCACGTAGCCTTCCACTTAGTCATCCTCTCAACCATCTTCAGCAGAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS GCA 72 bp AAGATGGTTGAGAGGATGACTAAGTGGAAGGCTACGTaGTCCAGGCATGCGGGGGTGGGTTATAGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: KMVERMTKWKAT*SRHAGVGYRGL
Trigger: CAGGCCTCTATAACCCACCCCCGCATGCCTGGAGCACGTAGCCTTCCACTTAGTCATCCTCTCAACCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619232.1
CDS CCA 72 bp ACCAGGGACAGAATGCGGCATGATGTGAGAGTTCTCTaGGGAGGTGACACTTTGAGTCCTCTTAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: TRDRMRHDVRVL*GGDTLSPLRRP
Trigger: AGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCAGAGAACTCTCACATCATGCCGCATTCTGTCCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 90 bp GGAAAACCTGGAGGCAGTGGTTGTCCATGCCCAGTTAGAGAGAGTTaGTCAAGGCTGTCTCTTGCGGTTGGTGTAGAAAGCGGGGTCTCA +
Preference number: 6 (lower is better)
Translates to: GKPGGSGCPCPVRES*SRLSLAVGVESGVS
Trigger: TGAGACCCCGCTTTCTACACCAACCGCAAGAGACAGCCTTGACAAACTCTCTCTAACTGGGCATGGACAACCACTGCCTCCAGGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp GTCTTCCATCTTGTATTGTCCTTTCAGCATCTGTTCTaGCGCCACTGCGGTCAGCCTCTATCTCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: VFHLVLSFQHLF*RHCGQPLSLGS
Trigger: TGACCCCAGAGATAGAGGCTGACCGCAGTGGCGGCAGAACAGATGCTGAAAGGACAATACAAGATGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 72 bp CGGCATGATGTGAGAGTTCTCTGGGGAGGTGACACTTaGAGTCCTCTTAGGAGGCCTTCCAGGTCTAGAACT +
Preference number: 6 (lower is better)
Translates to: RHDVRVLWGGDT*SPLRRPSRSRT
Trigger: AGTTCTAGACCTGGAAGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCAGAGAACTCTCACATCATGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 72 bp GGAGGCAGTGGTTGTCCATGCCCAGTTAGAGAGAGTTaGTCAAGGCTGTCTCTTGCGGTTGGTGTAGAAAGC +
Preference number: 6 (lower is better)
Translates to: GGSGCPCPVRES*SRLSLAVGVES
Trigger: GCTTTCTACACCAACCGCAAGAGACAGCCTTGACAAACTCTCTCTAACTGGGCATGGACAACCACTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CAA 90 bp GACAGAATGCGGCATGATGTGAGAGTTCTCTGGGGAGGTGACACTTaGAGTCCTCTTAGGAGGCCTTCCAGGTCTAGAACTTGCGTTGGT +
Preference number: 6 (lower is better)
Translates to: DRMRHDVRVLWGGDT*SPLRRPSRSRTCVG
Trigger: ACCAACGCAAGTTCTAGACCTGGAAGGCCTCCTAAGAGGACTCAAAGTGTCACCTCCCCAGAGAACTCTCACATCATGCCGCATTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS GCA 72 bp CTCAACTCTGGATGGGGGACTCTGAACTTGTGCTGCTaGTGCCATATTTGCAATGGTGCTGAGGTGGTTCAT +
Preference number: 6 (lower is better)
Translates to: LNSGWGTLNLCC*CHICNGAEVVH
Trigger: ATGAACCACCTCAGCACCATTGCAAATATGGCAGCAGCAGCACAAGTTCAGAGTCCCCCATCCAGAGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS CAA 72 bp CGGCCAAATCTCCCTCTTTGGGCCCAGGAAGTACATTaGGTGATAAGCCCATCAGCATCTGGTTCATGGACA +
Preference number: 6 (lower is better)
Translates to: RPNLPLWAQEVH*VISPSASGSWT
Trigger: TGTCCATGAACCAGATGCTGATGGGCTTATCACCAAATGTACTTCCTGGGCCCAAAGAGGGAGATTTGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS CAA 90 bp TGTCATGACCGGCCAAATCTCCCTCTTTGGGCCCAGGAAGTACATTaGGTGATAAGCCCATCAGCATCTGGTTCATGGACAACCCATTCT +
Preference number: 6 (lower is better)
Translates to: CHDRPNLPLWAQEVH*VISPSASGSWTTHS
Trigger: AGAATGGGTTGTCCATGAACCAGATGCTGATGGGCTTATCACCAAATGTACTTCCTGGGCCCAAAGAGGGAGATTTGGCCGGTCATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS TCA 72 bp TCAATATGCATCCTTTTTGACTCATGTCCCATGTCATaGCCGGCCAAATCTCCCTCTTTGGGCCCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: SICILFDSCPMS*PAKSPSLGPGS
Trigger: ACTTCCTGGGCCCAAAGAGGGAGATTTGGCCGGTCATGACATGGGACATGAGTCAAAAAGGATGCATATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS GCA 72 bp AAAGGAGATGGAAAACCTGGAGGCAGTGGTTGTCCATaGCCAGTTAGAGAGAGTTTGTCAAGGCTGTCTCTT +
Preference number: 6 (lower is better)
Translates to: KGDGKPGGSGCP*PVRESLSRLSL
Trigger: AAGAGACAGCCTTGACAAACTCTCTCTAACTGGGCATGGACAACCACTGCCTCCAGGTTTTCCATCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4
CDS CCA 72 bp GTACATTTGGTGATAAGCCCATCAGCATCTGGTTCATaGACAACCCATTCTGATGGACCGGGATTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: VHLVISPSASGS*TTHSDGPGFCQ
Trigger: CTGACAGAATCCCGGTCCATCAGAATGGGTTGTCCATGAACCAGATGCTGATGGGCTTATCACCAAATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613252.5
ENST00000619232.1
CDS CCA 72 bp GACGAATGTCTGACTGCAAAGTTCTTTTCTATAACATaGATTTCTTCAACAGGAAAGATTCAGTACATGACA +
Preference number: 6 (lower is better)
Translates to: DECLTAKFFSIT*ISSTGKIQYMT
Trigger: TGTCATGTACTGAATCTTTCCTGTTGAAGAAATCCATGTTATAGAAAAGAACTTTGCAGTCAGACATTCGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611519.4
ENST00000613252.5
ENST00000619232.1
ENST00000620444.4