RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000153071

Ensembl transcript IDs: ENST00000320816.11, ENST00000339788.10, ENST00000502388.1, ENST00000502879.1, ENST00000503513.5, ENST00000505968.1, ENST00000507539.5, ENST00000507990.1, ENST00000509337.5, ENST00000509457.1, ENST00000511536.5, ENST00000511792.5, ENST00000512525.5, ENST00000513052.1, ENST00000515269.5, ENST00000515700.5, ENST00000545653.5

Found 630 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACAAGGGCAGAAATCAGAACGTGTCTGGCTATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGA +
Preference number: 1 (lower is better)
Translates to: NKGRNQNVSGYQLCF*LLRPTFLFLWMVCR
Trigger: TCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGACACGTTCTGATTTCTGCCCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR TCA 90 bp CACACACGTAACCAAATGCCCGGTTGTCTGTCACATCACGGGCAATaGAAGAAATCTTATTTACTGGATGTTCATGCTCTATTACCTCCT +
Preference number: 1 (lower is better)
Translates to: HTRNQMPGCLSHHGQ*KKSYLLDVHALLPP
Trigger: AGGAGGTAATAGAGCATGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGGTTACGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR CCA 90 bp GATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGTCTaGCTATCAGCTTTGTTTTTGACTACTAAGGCCAACCTTTTTATT +
Preference number: 1 (lower is better)
Translates to: DNTSKLEQGQKSERV*LSALFLTTKANLFI
Trigger: AATAAAAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGACACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR CCA 90 bp GAGATGAATAATGTTCTTCCCTCATTTGCAATAGCTAGCAAGAAATaGGAGAAAAGGACAATCTTGGCCTTGGGAGAAATTGATCTTCAG +
Preference number: 1 (lower is better)
Translates to: EMNNVLPSFAIASKK*EKRTILALGEIDLQ
Trigger: CTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCCTTTTCTCCCATTTCTTGCTAGCTATTGCAAATGAGGGAAGAACATTATTCATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATATGAAGGGATGTGGTaGCTGCATCTCCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQYEGMW*LHLPTR
Trigger: TCTGGTTGGGAGATGCAGCCACCACATCCCTTCATA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCATAATACGTCAAAGCTaGAACAAGGGCAGAAATCAG +
Preference number: 2 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFIIRQS*NKGRNQ
Trigger: CTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTAT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGATAATACGTCAAAGCTaGAACAAGGGCAGAAATCAG +
Preference number: 2 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVIIRQS*NKGRNQ
Trigger: CTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTAT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTT +
Preference number: 2 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFYQLCF*LLRPTF
Trigger: AAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAAATCAGAACGTGTCTaGCTATCAGCTTTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFKSERV*LSALFL
Trigger: CAAAAACAAAGCTGATAGCCAGACACGTTCTGATTT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAGAGTCTGTTGCTTGTaGAAGGGTGGTAATACTACT +
Preference number: 2 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQRVCCL*KGGNTT
Trigger: AGTAGTATTACCACCCTTTCACAAGCAACAGACTCT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR TCA 90 bp CCAAATGCCCGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTTTCCCCACAGAACTTTaGGAACGAAGAAGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: PNARLSVTSRAMKEILFTFPTEL*ERRRGA
Trigger: GGCTCCCCTTCTTCGTTCTCAAAGTTCTGTGGGGAA...AGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATTTTATTCCTCTGGATaGTCTGCAGACCAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQFYSSG*SADQVQ
Trigger: CTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTATGAAGGGATGTGGTaGCTGCATCTCCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: LQNCAHNRTENELGTFPSYEGMW*LHLPTR
Trigger: TCTGGTTGGGAGATGCAGCCACCACATCCCTTCATA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR CAA 90 bp GAACAAGGGCAGAAATCAGAACGTGTCTGGCTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: EQGQKSERVWLSALF*TTKANLFIPLDGLQ
Trigger: CTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGACACGTTCTGATTTCTGCCCTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTT +
Preference number: 2 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQYQLCF*LLRPTF
Trigger: AAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR GCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTAAGGGATGTGGTGGCTaGATCTCCCAACCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: CSTITFRFYALKQNPQTTKGCGG*ISQPEG
Trigger: ACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTT...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTTTATTCCTCTGGATaGTCTGCAGACCAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTFYSSG*SADQVQ
Trigger: CTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR CAA 90 bp AAGCTGGAACAAGGGCAGAAATCAGAACGTGTCTGGCTATCAGCTTaGTTTTTGACTACTAAGGCCAACCTTTTTATTCCTCTGGATGGT +
Preference number: 2 (lower is better)
Translates to: KLEQGQKSERVWLSA*FLTTKANLFIPLDG
Trigger: ACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGACACGTTCTGATTTCTGCCCTTGTTCCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR GCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAAGGGATGTGGTGGCTaGATCTCCCAACCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKKGCGG*ISQPEG
Trigger: ACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTACCTTTTTATTCCTCTaGATGGTCTGCAGACCAAGT +
Preference number: 2 (lower is better)
Translates to: LQNCAHNRTENELGTFPSTFLFL*MVCRPS
Trigger: ACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCACCTTTTTATTCCTCTaGATGGTCTGCAGACCAAGT +
Preference number: 2 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSTFLFL*MVCRPS
Trigger: ACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR CCA 90 bp GATGTTCATGCTCTATTACCTCCTATTCTGTTTTCTGCCTGTTACTTCTGGAGACAAGTAGCAAATTGTTaGTCAGACTCAGGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: DVHALLPPILFSACYFWRQVANC*SDSGGQ
Trigger: CTGACCACCTGAGTCTGACCAACAATTTGCTACTTG...TCTCCAGAAGTAACAGGCAGAAAACAGAATAGGAGGTAATAGAGCATGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTT +
Preference number: 2 (lower is better)
Translates to: LQNCAHNRTENELGTFPSYQLCF*LLRPTF
Trigger: AAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCATAATACGTCAAAGCTaGAACAAGGGCAGAAATCAG +
Preference number: 2 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSIIRQS*NKGRNQ
Trigger: CTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTAT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTT +
Preference number: 2 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSYQLCF*LLRPTF
Trigger: AAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAAAAGGGGAGGAGAGATaGATAATGTTCTTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLKGEER*IMFFPH
Trigger: ATGAGGGAAGAACATTATTCATCTCTCCTCCCCTTT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTATTTTATTCCTCTGGATaGTCTGCAGACCAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLFYSSG*SADQVQ
Trigger: CTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAA...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAGGACAATCTTGGCCTTaGGAGAAATTGATCTTCAGA +
Preference number: 2 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLGQSWP*EKLIFR
Trigger: TCTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCC...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR GCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTACTCTTGAACATTAACTaGTCTTCTGGAACTTCAGCT +
Preference number: 2 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLLLNIN*SSGTSA
Trigger: AGCTGAAGTTCCAGAAGAGCAGTTAATGTTCAAGAG...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAGGACAATCTTGGCCTTaGGAGAAATTGATCTTCAGA +
Preference number: 2 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKGQSWP*EKLIFR
Trigger: TCTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCC...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAAATCAGAACGTGTCTaGCTATCAGCTTTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKKSERV*LSALFL
Trigger: CAAAAACAAAGCTGATAGCCAGACACGTTCTGATTT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CAA 90 bp ATGCTGGCCTTCTCCTCCACACACGTAACCAAATGCCCGGTTGTCTGTCACATCGTTCCCCACAGAACTTaGAGAACGAAGAAGGGGAGC +
Preference number: 3 (lower is better)
Translates to: MLAFSSTHVTKCPVVCHIVPHRT*RTKKGS
Trigger: GCTCCCCTTCTTCGTTCTCAAAGTTCTGTGGGGAAC...GATGTGACAGACAACCGGGCATTTGGTTACGTGTGTGGAGGAGAAGGCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR GCA 72 bp CTGATGCTGGCCTTCTCCTCCACACACGTAACCAAATaGCCGGTTGTCTGTCACATCACGGGCAATGAAAGA +
Preference number: 3 (lower is better)
Translates to: LMLAFSSTHVTK*PVVCHITGNER
Trigger: TCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGGTTACGTGTGTGGAGGAGAAGGCCAGCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAACTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQLSALF*TTKANL
Trigger: AAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAG...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CAA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGTCTGGCTATCAGCTTaGTTTTTGACTACTAAGGCC +
Preference number: 3 (lower is better)
Translates to: LQNCAHNRTENELGTFPSVWLSA*FLTTKA
Trigger: GGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGAC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CAA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTAGGACAATCTTGGCCTaGGGAGAAATTGATCTTCAG +
Preference number: 3 (lower is better)
Translates to: LQNCAHNRTENELGTFPSRTILA*GEIDLQ
Trigger: CTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCCT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR TCA 72 bp AACCAAATGCCCGGTTGTCTGTCACATCACGGGCAATaGAAGAAATCTTATTTACTGGATGTTCATGCTCTA +
Preference number: 3 (lower is better)
Translates to: NQMPGCLSHHGQ*KKSYLLDVHAL
Trigger: TAGAGCATGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTCTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: NKATDNTSKLEQGQKSERLSALF*TTKANL
Trigger: AAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAG...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGTCTGGCTATCAGCTTaGTTTTTGACTACTAAGGCC +
Preference number: 3 (lower is better)
Translates to: CSTITFRFYALKQNPQTTVWLSA*FLTTKA
Trigger: GGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGAC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CAA 90 bp CTGCCTGTTACTTCTGGAGATGTAATATATGATATATTTGTTCCCCACAGAACTTCAAGTAGCAAATTGTaGGTCAGACTCAGGTGGTCA +
Preference number: 3 (lower is better)
Translates to: LPVTSGDVIYDIFVPHRTSSSKL*VRLRWS
Trigger: TGACCACCTGAGTCTGACCAACAATTTGCTACTTGA...AGTTCTGTGGGGAACAAATATATCATATATTACATCTCCAGAAGTAACAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR-3UTR CAA 90 bp GTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTGGATGTTCATGAATTCAAGTAGCAAATaGTTGGTCAGACTCAGGTGG +
Preference number: 3 (lower is better)
Translates to: VVCHITGNERNLIYWMFMNSSSK*LVRLRW
Trigger: CCACCTGAGTCTGACCAACAATTTGCTACTTGAATT...CATGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
3UTR TCA 72 bp AGAAATCAGAACGTGTCTGGCTATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTTTTATTCCTCTGGATG +
Preference number: 3 (lower is better)
Translates to: RNQNVSGYQLCF*LLRPTFLFLWM
Trigger: CATCCAGAGGAATAAAAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGACACGTTCTGATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR CCA 72 bp AATGTTCTTCCCTCATTTGCAATAGCTAGCAAGAAATaGGAGAAAAGGACAATCTTGGCCTTGGGAGAAATT +
Preference number: 3 (lower is better)
Translates to: NVLPSFAIASKK*EKRTILALGEI
Trigger: AATTTCTCCCAAGGCCAAGATTGTCCTTTTCTCCCATTTCTTGCTAGCTATTGCAAATGAGGGAAGAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: CSTITFRFYALKQNPQTTLSALF*TTKANL
Trigger: AAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAAGCACCTAATGTGTTaGGCACAATCACATTTAGCT +
Preference number: 3 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKKHLMC*AQSHLA
Trigger: AGCTAAATGTGATTGTGCCAAACACATTAGGTGCTT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAACTAACGACATTGAGATaGTGGCTGCAAGAAAAGTTT +
Preference number: 3 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKLTTLR*WLQEKF
Trigger: AAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAG...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGCTCTGGGAGGTGGCTaGGGAGGAGTGACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVALGGG*GGVTRR
Trigger: TCTCCTGGTCACTCCTCCTCAGCCACCTCCCAGAGC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCCGCGGGCACAGCAGGTaGCTGCCGCAGTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFRGHSR*LPQLEI
Trigger: GATTTCCAACTGCGGCAGCCACCTGCTGTGCCCGCG...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCCCAGTGGACACTTGGTaGCACCAGGCGATCCCGATG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFPVDTW*HQAIPM
Trigger: CATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGG...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCCAGTGGACACTTGGTaGCACCAGGCGATCCCGATG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVPVDTW*HQAIPM
Trigger: CATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTGATGCTGGCCTTCTCCTCCACACACGTAACCAAATGCCCGGTTGTCTGTCACTGTTTGTGTTGTCCCTaGGACCGACCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LMLAFSSTHVTKCPVVCHCLCCP*DRPAAA
Trigger: GGCGGCAGCTGGTCGGTCTCAGGGACAACACAAACA...GTGACAGACAACCGGGCATTTGGTTACGTGTGTGGAGGAGAAGGCCAGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTGCATGGATGGGGGCTaGGTGGACACAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFCMDGG*VDTAGA
Trigger: AGCTCCTGCTGTGTCCACTCAGCCCCCATCCATGCA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCTACAGCGCAGCGGATaGGGCGGGCCTCGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVLQRSG*GGPRLN
Trigger: ATTTAAGCGAGGCCCGCCGCATCCGCTGCGCTGTAG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTGATGCTGGCCTTCTCCTCCACACACGTAACCAAATGCCCGGTTGTCTGTCACCTACAGCGCAGCGGATaGGGCGGGCCTCGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: LMLAFSSTHVTKCPVVCHLQRSG*GGPRLN
Trigger: ATTTAAGCGAGGCCCGCCGCATCCGCTGCGCTGTAG...GTGACAGACAACCGGGCATTTGGTTACGTGTGTGGAGGAGAAGGCCAGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCCACTGGAGATGTCCTTaGGAGGGCCAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFHWRCP*EGQLWE
Trigger: CTCCCAGAGCTGGCCCTCCCAAGGACATCTCCAGTG...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCACTGGAGATGTCCTTaGGAGGGCCAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVHWRCP*EGQLWE
Trigger: CTCCCAGAGCTGGCCCTCCCAAGGACATCTCCAGTG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGCGAGCCCCACCAGCTaGGGGCGATCGCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTASPTS*GRSQGP
Trigger: GGGTCCCTGCGATCGCCCCCAGCTGGTGGGGCTCGC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGGCTCCCGGAGCCATTaGAGGGGACTGATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFGSRSH*RGLIED
Trigger: GTCTTCAATCAGTCCCCTTCAATGGCTCCGGGAGCC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAAAGGGCCATGGGCCTaGCTGAGCTTCCTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFKGPWA*LSFLFA
Trigger: GGCAAACAGGAAGCTCAGGCAGGCCCATGGCCCTTT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTGGATGGGGGCTGAGTaGACACAGCAGGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFWMGAE*TQQELE
Trigger: TTCCAGCTCCTGCTGTGTCCACTCAGCCCCCATCCA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGCCTGTTGGTCGGGCTaGCCATTGGTTGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVACWSG*PLVALV
Trigger: AACAAGTGCAACCAATGGTCAGCCCGACCAACAGGC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCCTGCCTGAGGGAGTGTaGCAGTTACACCACCTAGAC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFLPEGV*QLHHLD
Trigger: GTCTAGGTGGTGTAACTGTCACACTCCCTCAGGCAG...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTTCAGGCAAGAAGGATaGCTGAGGCGTTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFFRQEG*LRRWSR
Trigger: CCTCGACCAACGCCTCAGGCATCCTTCTTGCCTGAA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCATTGGGTGCCACAGATaGAGAAGGGCCCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFIGCHR*RRAPDN
Trigger: GTTGTCTGGGGCCCTTCTGCATCTGTGGCACCCAAT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGAAGGGATGTGGTGGCTaGATCTCCCAACCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVKGCGG*ISQPEG
Trigger: ACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGTTGACCACCCATCATaGCTCCCGGAGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFVDHPS*LPEPLK
Trigger: CTTCAATGGCTCCGGGAGCCATGATGGGTGGTCAAC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGTTGACCACCCATCATaGCTCCCGGAGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVVDHPS*LPEPLK
Trigger: CTTCAATGGCTCCGGGAGCCATGATGGGTGGTCAAC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAACGCGGGCACAGCAGGTaGCTGCCGCAGTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQRGHSR*LPQLEI
Trigger: GATTTCCAACTGCGGCAGCCACCTGCTGTGCCCGCG...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATGTTTGTGTTGTCCCTaGGACCGACCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQCLCCP*DRPAAA
Trigger: GGCGGCAGCTGGTCGGTCTCAGGGACAACACAAACA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGGTTCGGGGAGGATTTaGCAGAGAAGCCGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVGSGRI*QRSRSV
Trigger: AACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAGGCTGGTTCCAACCTaGAACAGCTGGACTTGTACC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFRLVPT*NSWTCT
Trigger: GGTACAAGTCCAGCTGTTTCAGGTTGGAACCAGCCT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGTGGGTCTAAGGCAGTaGAGGCATCACTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFVGLRQ*RHHWRC
Trigger: ACATCTCCAGTGATGCCTTCACTGCCTTAGACCCAC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTGTGTTCCATGGTCCTaGCTGAGGGAGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVCVPWS*LRECDS
Trigger: ACTGTCACACTCCCTCAGGCAGGACCATGGAACACA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAACACCAGGGGCCCCACTaGGGCAGGAGCACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQHQGPH*GRSTCF
Trigger: AAAACAAGTGCTCCTGCCCCAGTGGGGCCCCTGGTG...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGAGATGCTGTGTTCCATaGTCCTGCCTGAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVRCCVP*SCLREC
Trigger: ACACTCCCTCAGGCAGGACCATGGAACACAGCATCT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGCAGGGAAACTTGTCTaGGAGCTGGCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFAGKLV*ELALVV
Trigger: AACCACCAAAGCCAGCTCCCAGACAAGTTTCCCTGC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGATTGGTCTGGCTGTGTaGAAGGATCGTCACGGAAAG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVIGLAV*KDRHGK
Trigger: CTTTCCGTGACGATCCTTTCACACAGCCAGACCAAT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGCCATGGGCCTGCCTaGGCTTCCTGTTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGHGPA*ASCLPV
Trigger: GACTGGCAAACAGGAAGCTCAGGCAGGCCCATGGCC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTATGGAGTCATGTGGTaGGGACTGGACAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVYGVMW*GLDRAF
Trigger: GAAAGCTCTGTCCAGTCCTCACCACATGACTCCATA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCAGGAGCACTTGTTTTaGAGAGATCCAGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVQEHLF*RDPEGW
Trigger: CCAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCCAGGAGCACTTGTTTTaGAGAGATCCAGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFQEHLF*RDPEGW
Trigger: CCAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTG...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGACTGCTGGCTGGGTTTaGGAACTTGAAAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVTAGWV*ELEKGH
Trigger: ATGGCCCTTTTCAAGTTCGCAAACCCAGCCAGCAGT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGTCCCAGAAGAAGTCTaGTCTCCCTTCCGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTVPEEV*SPFRAG
Trigger: GCCCGCGCGGAAGGGAGAGCAGACTTCTTCTGGGAC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGTGCCAGGATGTTTTTaGTGCCTGGGCTTGGTAACT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFVPGCF*CLGLVT
Trigger: AGTTACCAAGCCCAGGCAGCAAAAACATCCTGGCAC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGTATGGACAGTCCTTTaGGAGGGCTTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFVWTVL*EGFPQK
Trigger: CTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATAC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTTACGCCATTCTGTATaGACAGTCCTTTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFLRHSV*TVLWEG
Trigger: GCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTGCCTCTTCCTGGTTTaGTACTTTGTGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVCLFLV*YFVEVG
Trigger: TCCCACCTCCACAAAGTACCAAACCAGGAAGAGGCA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTGCCTCTTCCTGGTTTaGTACTTTGTGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFCLFLV*YFVEVG
Trigger: TCCCACCTCCACAAAGTACCAAACCAGGAAGAGGCA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATGGATGGGGGCTGAGTaGACACAGCAGGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQWMGAE*TQQELE
Trigger: TTCCAGCTCCTGCTGTGTCCACTCAGCCCCCATCCA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTATGAAGGGATGTGGTaGCTGCATCTCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVYEGMW*LHLPTR
Trigger: TCTGGTTGGGAGATGCAGCCACCACATCCCTTCATA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCCAGTGGACACTTGGTaGCACCAGGCGATCCCGATG +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTPVDTW*HQAIPM
Trigger: CATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGAGGAGCAAAGATGTCTaGTGCAAGCAAGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVRSKDV*CKQVIG
Trigger: GCCAATGACTTGCTTGCATCAGACATCTTTGCTCCT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTGCATGGATGGGGGCTaGGTGGACACAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTCMDGG*VDTAGA
Trigger: AGCTCCTGCTGTGTCCACTCAGCCCCCATCCATGCA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGACTCCCACAAGAACCTaGGCATTAAGGGTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVTPTRT*ALRVKR
Trigger: TCTCTTGACCCTTAATGCTCAGGTTCTTGTGGGAGT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCACACACGTAACCAAATaGCCGGTTGTCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFTHVTK*PVVCHI
Trigger: GATGTGACAGACAACCGGGCATTTGGTTACGTGTGT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATTCAGGCAAGAAGGATaGCTGAGGCGTTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQFRQEG*LRRWSR
Trigger: CCTCGACCAACGCCTCAGGCATCCTTCTTGCCTGAA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGGCACAGCAGGTGGCTaGCGCAGTTGGAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQGTAGG*RSWKSL
Trigger: TAAGGATTTCCAACTGCGGCAGCCACCTGCTGTGCC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAAGGGATGTGGTGGCTaGATCTCCCAACCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQKGCGG*ISQPEG
Trigger: ACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGGTCGGGCTGACCATTaGTTGCACTTGTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFGRADH*LHLFLL
Trigger: AAGTAGAAACAAGTGCAACCAATGGTCAGCCCGACC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGTTCTCACTGCTGGCTaGGTTTGCGAACTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFVLTAG*VCELEK
Trigger: CTTTTCAAGTTCGCAAACCCAGCCAGCAGTGAGAAC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCCTGTGGGTGACGCCTaGCCTGAAGGTTCTGAGACG +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTPVGDA*PEGSET
Trigger: CGTCTCAGAACCTTCAGGCCAGGCGTCACCCACAGG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAACGCGGGCACAGCAGGTaGCTGCCGCAGTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSERGHSR*LPQLEI
Trigger: GATTTCCAACTGCGGCAGCCACCTGCTGTGCCCGCG...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGAAGAGAACAGGAGGTaGTGCCGTTTGTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVEENRR*CRLLRM
Trigger: CATTCTTAACAAACGGCATCACCTCCTGTTCTCTTC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCTGGGTTTGCGAACTTaGAAAGGGCCATGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTLGLRT*KGPWAC
Trigger: GCAGGCCCATGGCCCTTTTCAAGTTCGCAAACCCAG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAAGCAAGTCATTGGCTaGAGACTTAGCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFKQVIG*RLSSPS
Trigger: AGAAGGACTGCTAAGTCTTCAGCCAATGACTTGCTT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTGCATGGATGGGGGCTaGGTGGACACAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSCMDGG*VDTAGA
Trigger: AGCTCCTGCTGTGTCCACTCAGCCCCCATCCATGCA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGCTCTGGGAGGTGGCTaGGGAGGAGTGACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSALGGG*GGVTRR
Trigger: TCTCCTGGTCACTCCTCCTCAGCCACCTCCCAGAGC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAACATTGGATGTGGCTaGTTAACTCCCACAAGAACC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFNIGCG*LTPTRT
Trigger: GGTTCTTGTGGGAGTTAATCAGCCACATCCAATGTT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGGGCTGACCATTGGTTaGACTTGTTTCTACTTCGTT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVGLTIG*TCFYFV
Trigger: AACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGGGCTGACCATTGGTTaGACTTGTTTCTACTTCGTT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFGLTIG*TCFYFV
Trigger: AACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCTGGCACATCATCAATaGCAATCAGCTTGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVLAHHQ*QSAWPY
Trigger: ATAAGGCCAAGCTGATTGGCATTGATGATGTGCCAG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGATTTTGAGTTCTCACTaGTGGCTGGGTTTGCGAACT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVILSSH*WLGLRT
Trigger: AGTTCGCAAACCCAGCCAGCAGTGAGAACTCAAAAT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCATTTTGAGTTCTCACTaGTGGCTGGGTTTGCGAACT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFILSSH*WLGLRT
Trigger: AGTTCGCAAACCCAGCCAGCAGTGAGAACTCAAAAT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATGTGTTCCATGGTCCTaGCTGAGGGAGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQCVPWS*LRECDS
Trigger: ACTGTCACACTCCCTCAGGCAGGACCATGGAACACA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCATTGAAGACCAAAGATaGTGTGTTCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFIEDQR*CVPWSC
Trigger: GCAGGACCATGGAACACAGCATCTTTGGTCTTCAAT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGTCCCAGAAGAAGTCTaGTCTCCCTTCCGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSVPEEV*SPFRAG
Trigger: GCCCGCGCGGAAGGGAGAGCAGACTTCTTCTGGGAC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTTATTAACTCGCGCTaGAGCGGCGCAGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTFINSR*SGAEDP
Trigger: GGGGTCCTCTGCGCCGCTGCAGCGCGAGTTAATAAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGACTCCCCAGGAATGTaGCAGGATGTTTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQDSPGM*QDVFAA
Trigger: GGCAGCAAAAACATCCTGGCACATTCCTGGGGAGTC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCATCCCCTCTTGCATCTaGCACATCATCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFIPSCI*HIINAN
Trigger: ATTGGCATTGATGATGTGCCAGATGCAAGAGGGGAT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGATCCCCTCTTGCATCTaGCACATCATCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVIPSCI*HIINAN
Trigger: ATTGGCATTGATGATGTGCCAGATGCAAGAGGGGAT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAACCTGTGGGTGACGCCTaGCCTGAAGGTTCTGAGACG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEPVGDA*PEGSET
Trigger: CGTCTCAGAACCTTCAGGCCAGGCGTCACCCACAGG...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGAGAGAGGAGTGCATaGATGGGGGCTGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGERSA*MGAEWT
Trigger: TGTCCACTCAGCCCCCATCCATGCACTCCTCTCTCC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTCACTGGAGATGTCCTTaGGAGGGCCAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSHWRCP*EGQLWE
Trigger: CTCCCAGAGCTGGCCCTCCCAAGGACATCTCCAGTG...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGGGAGCTGGCTTTGGTaGTTCATTGATCTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFGSWLW*FIDLVQ
Trigger: TTGAACAAGATCAATGAACCACCAAAGCCAGCTCCC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTCTGGGAGCTGGCTTTaGTGGTTCATTGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVSGSWL*WFIDLV
Trigger: AACAAGATCAATGAACCACCAAAGCCAGCTCCCAGA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACTTTGAGAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGACCAGTGGACACTTGGTaGCACCAGGCGATCCCGATG +
Preference number: 4 (lower is better)
Translates to: TLRTKKGSRNSSSKLLVRPVDTW*HQAIPM
Trigger: CATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGG...TCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTCTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCCAGTGGACACTTGGTaGCACCAGGCGATCCCGATG +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSPVDTW*HQAIPM
Trigger: CATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTGTTTGTGTTGTCCCTaGGACCGACCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSCLCCP*DRPAAA
Trigger: GGCGGCAGCTGGTCGGTCTCAGGGACAACACAAACA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAATTGGTCTGGCTGTGTaGAAGGATCGTCACGGAAAG +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQIGLAV*KDRHGK
Trigger: CTTTCCGTGACGATCCTTTCACACAGCCAGACCAAT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCTGCCTGAGGGAGTGTaGCAGTTACACCACCTAGAC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTLPEGV*QLHHLD
Trigger: GTCTAGGTGGTGTAACTGTCACACTCCCTCAGGCAG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGGCTCCCGGAGCCATTaGAGGGGACTGATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEGSRSH*RGLIED
Trigger: GTCTTCAATCAGTCCCCTTCAATGGCTCCGGGAGCC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGGCTCCCGGAGCCATTaGAGGGGACTGATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSGSRSH*RGLIED
Trigger: GTCTTCAATCAGTCCCCTTCAATGGCTCCGGGAGCC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGGAAAAATATTGCTCTaGAAAGGATTCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFGKILL*KGFPKG
Trigger: CCCTTTGGGGAATCCTTTTCAGAGCAATATTTTTCC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGGAAAAATATTGCTCTaGAAAGGATTCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVGKILL*KGFPKG
Trigger: CCCTTTGGGGAATCCTTTTCAGAGCAATATTTTTCC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAAAGGGGAGGAGAGATaGATAATGTTCTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFKGEER*IMFFPH
Trigger: ATGAGGGAAGAACATTATTCATCTCTCCTCCCCTTT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCTACAGCGCAGCGGATaGGGCGGGCCTCGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSLQRSG*GGPRLN
Trigger: ATTTAAGCGAGGCCCGCCGCATCCGCTGCGCTGTAG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGTCCCAGAAGAAGTCTaGTCTCCCTTCCGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERVPEEV*SPFRAG
Trigger: GCCCGCGCGGAAGGGAGAGCAGACTTCTTCTGGGAC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCCTCTGGATGGTCTaGAGACCAAGTTCAGAATTT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVFLWMV*RPSSEF
Trigger: AAATTCTGAACTTGGTCTGCAGACCATCCAGAGGAA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAATGGTTCTAATCAGATaGTGGCAGCTGAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQMVLIR*WQLRTP
Trigger: GGGAGTCCTCAGCTGCCAGCATCTGATTAGAACCAT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTGGTTTGGTACTTTGTaGAGGTGGGATAATGGCTAT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFWFGTL*RWDNGY
Trigger: ATAGCCATTATCCCACCTCCACAAAGTACCAAACCA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCACCAGGGGCCCCACTaGGGCAGGAGCACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSHQGPH*GRSTCF
Trigger: AAAACAAGTGCTCCTGCCCCAGTGGGGCCCCTGGTG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGTTGACCACCCATCATaGCTCCCGGAGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTVDHPS*LPEPLK
Trigger: CTTCAATGGCTCCGGGAGCCATGATGGGTGGTCAAC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTGGATGGGGGCTGAGTaGACACAGCAGGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSWMGAE*TQQELE
Trigger: TTCCAGCTCCTGCTGTGTCCACTCAGCCCCCATCCA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGGAGAGAGGAGTGCATaGATGGGGGCTGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSGERSA*MGAEWT
Trigger: TGTCCACTCAGCCCCCATCCATGCACTCCTCTCTCC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTCGCGGGCACAGCAGGTaGCTGCCGCAGTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERRGHSR*LPQLEI
Trigger: GATTTCCAACTGCGGCAGCCACCTGCTGTGCCCGCG...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTTTATTCCTCTGGATaGTCTGCAGACCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVFYSSG*SADQVQ
Trigger: CTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGGACTGAAAATGAACTaGGAACGTTTCCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFGLKMN*ERFQVV
Trigger: CACAACTTGGAAACGTTCCCAGTTCATTTTCAGTCC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGCCTGTTGGTCGGGCTaGCCATTGGTTGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEACWSG*PLVALV
Trigger: AACAAGTGCAACCAATGGTCAGCCCGACCAACAGGC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGGCAAGAAGGATGCCTaGGGCGTTGGTCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSGKKDA*GVGRGR
Trigger: TCTTCCTCGACCAACGCCTCAGGCATCCTTCTTGCC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTCTGATCTGGAGATTTaGGAGAATCAAACGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFSDLEI*ENQTKK
Trigger: CTTCTTCGTTTGATTCTCTCAAATCTCCAGATCAGA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGTTCGGGGAGGATTTaGCAGAGAAGCCGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGSGRI*QRSRSV
Trigger: AACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTCCATGGTCCTGCCTaGGGGAGTGTGACAGTTACA +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTFHGPA*GSVTVT
Trigger: TGTAACTGTCACACTCCCTCAGGCAGGACCATGGAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGCCATTGAAGGGGACTaGTTGAAGACCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQAIEGD*LKTKDA
Trigger: AGCATCTTTGGTCTTCAATCAGTCCCCTTCAATGGC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTAGGCTGGTTCCAACCTaGAACAGCTGGACTTGTACC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTRLVPT*NSWTCT
Trigger: GGTACAAGTCCAGCTGTTTCAGGTTGGAACCAGCCT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTGCATGGATGGGGGCTaGGTGGACACAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERCMDGG*VDTAGA
Trigger: AGCTCCTGCTGTGTCCACTCAGCCCCCATCCATGCA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTTTCTTTCACATCCTTaGTCTCTTTATCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFFLSHP*SLYPQV
Trigger: CACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGTCTTGTTTAGCTTCTaGGCATCACCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQVLFSF*ASPSSS
Trigger: GGAAGAAGAGGGTGATGCTCAGAAGCTAAACAAGAC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTGATGCTGGCCTTCTCCTCCACACACGTAACCAAATGCCCGGTTGTCTGTCACAGGTATCAGCAAATGTaGATTCTTACCCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LMLAFSSTHVTKCPVVCHRYQQM*ILTPVF
Trigger: GAAAACTGGGGTAAGAATTCACATTTGCTGATACCT...GTGACAGACAACCGGGCATTTGGTTACGTGTGTGGAGGAGAAGGCCAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAAAGGGCCATGGGCCTaGCTGAGCTTCCTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSKGPWA*LSFLFA
Trigger: GGCAAACAGGAAGCTCAGGCAGGCCCATGGCCCTTT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTCCAGAGGGTTGGGCTaGAGGGCTGTAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSSRGLG*RAVGCP
Trigger: AGGACAACCTACAGCCCTGCAGCCCAACCCTCTGGA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTGTGTTCCATGGTCCTaGCTGAGGGAGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTCVPWS*LRECDS
Trigger: ACTGTCACACTCCCTCAGGCAGGACCATGGAACACA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAATTGGGTGCCACAGATaGAGAAGGGCCCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEIGCHR*RRAPDN
Trigger: GTTGTCTGGGGCCCTTCTGCATCTGTGGCACCCAAT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGGCACAGCAGGTGGCTaGCGCAGTTGGAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEGTAGG*RSWKSL
Trigger: TAAGGATTTCCAACTGCGGCAGCCACCTGCTGTGCC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGTTCTCACTGCTGGCTaGGTTTGCGAACTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQVLTAG*VCELEK
Trigger: CTTTTCAAGTTCGCAAACCCAGCCAGCAGTGAGAAC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTCCTGTGGGTGACGCCTaGCCTGAAGGTTCTGAGACG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERPVGDA*PEGSET
Trigger: CGTCTCAGAACCTTCAGGCCAGGCGTCACCCACAGG...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTAGATGCTGTGTTCCATaGTCCTGCCTGAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTRCCVP*SCLREC
Trigger: ACACTCCCTCAGGCAGGACCATGGAACACAGCATCT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATTGTTGACCAAGCATTaGGTGCCACAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQLLTKH*VPQMQK
Trigger: CTTCTGCATCTGTGGCACCCAATGCTTGGTCAACAA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGCAGGGAAACTTGTCTaGGAGCTGGCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTAGKLV*ELALVV
Trigger: AACCACCAAAGCCAGCTCCCAGACAAGTTTCCCTGC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
3UTR CAA 72 bp AGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTaGTGCCCATTTGCAATTCTAGTTCTTGGGACTAGC +
Preference number: 4 (lower is better)
Translates to: REWPPLPQEGYR*CPFAILVLGTS
Trigger: GCTAGTCCCAAGAACTAGAATTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGCCTGTTGGTCGGGCTaGCCATTGGTTGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSACWSG*PLVALV
Trigger: AACAAGTGCAACCAATGGTCAGCCCGACCAACAGGC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACTTTGAGAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGAGCCTGTTGGTCGGGCTaGCCATTGGTTGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: TLRTKKGSRNSSSKLLVRACWSG*PLVALV
Trigger: AACAAGTGCAACCAATGGTCAGCCCGACCAACAGGC...TCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTCTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR TCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTCTCTTAAAGAATTCTaGTTGGTGTCGATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVSLKEF*LVSISE
Trigger: CTCTGAAATCGACACCAATCAGAATTCTTTAAGAGA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTCTCTTAAAGAATTCTaGTTGGTGTCGATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFSLKEF*LVSISE
Trigger: CTCTGAAATCGACACCAATCAGAATTCTTTAAGAGA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGGCAAGAAGGATGCCTaGGGCGTTGGTCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERGKKDA*GVGRGR
Trigger: TCTTCCTCGACCAACGCCTCAGGCATCCTTCTTGCC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGGCCATGGGCCTGCCTaGGCTTCCTGTTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTGHGPA*ASCLPV
Trigger: GACTGGCAAACAGGAAGCTCAGGCAGGCCCATGGCC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTCAGATACCCCATTTTaGGTTCTCACTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTSDTPF*VLTAGW
Trigger: CCAGCCAGCAGTGAGAACTCAAAATGGGGTATCTGA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGGTTCGGGGAGGATTTaGCAGAGAAGCCGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEGSGRI*QRSRSV
Trigger: AACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAAGCAAGTCATTGGCTaGAGACTTAGCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQKQVIG*RLSSPS
Trigger: AGAAGGACTGCTAAGTCTTCAGCCAATGACTTGCTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTTCCATGGTCCTGCCTaGGGGAGTGTGACAGTTACA +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSFHGPA*GSVTVT
Trigger: TGTAACTGTCACACTCCCTCAGGCAGGACCATGGAA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGGCTGACTAAAACCTaGAGGTTGACCACCCATCAT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGLTKT*RLTTHH
Trigger: ATGATGGGTGGTCAACCTTCAGGTTTTAGTCAGCCC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTCAAAGGGCTTGTTGTTaGCCAAGCATTGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSQRACC*PSIGCH
Trigger: GTGGCACCCAATGCTTGGTCAACAACAAGCCCTTTG...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAGCTCTGGGAGGTGGCTaGGGAGGAGTGACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLALGGG*GGVTRR
Trigger: TCTCCTGGTCACTCCTCCTCAGCCACCTCCCAGAGC...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGTGGGTCTAAGGCAGTaGAGGCATCACTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEVGLRQ*RHHWRC
Trigger: ACATCTCCAGTGATGCCTTCACTGCCTTAGACCCAC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGCTTTGGTGGTTCATTaGTCTTGTTCAATAGTTGAT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFALVVH*SCSIVD
Trigger: ATCAACTATTGAACAAGATCAATGAACCACCAAAGC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAACATTGGATGTGGCTaGTTAACTCCCACAAGAACC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQNIGCG*LTPTRT
Trigger: GGTTCTTGTGGGAGTTAATCAGCCACATCCAATGTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTTTACTGGATGTTCATaGTCTATTACCCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFFTGCS*SITPVF
Trigger: GAAAACTGGGGTAATAGAGCATGAACATCCAGTAAA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAAAGGGCCATGGGCCTaGCTGAGCTTCCTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERKGPWA*LSFLFA
Trigger: GGCAAACAGGAAGCTCAGGCAGGCCCATGGCCCTTT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCCAGAGGGTTGGGCTaGAGGGCTGTAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSRGLG*RAVGCP
Trigger: AGGACAACCTACAGCCCTGCAGCCCAACCCTCTGGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAATTGAAGACCAAAGATaGTGTGTTCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQIEDQR*CVPWSC
Trigger: GCAGGACCATGGAACACAGCATCTTTGGTCTTCAAT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCATTGGGTGCCACAGATaGAGAAGGGCCCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSIGCHR*RRAPDN
Trigger: GTTGTCTGGGGCCCTTCTGCATCTGTGGCACCCAAT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAAAGTCATCATGGTCTaGATTCTCCTGAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQKVIMV*ILLRNA
Trigger: GGCATTCCTCAGGAGAATGCAGACCATGATGACTTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCAATGCCAATCAGCTTaGCCTTATATTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVQCQSA*PYILHH
Trigger: ATGGTGTAAAATATAAGGCCAAGCTGATTGGCATTG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGTATGGACAGTCCTTTaGGAGGGCTTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTVWTVL*EGFPQK
Trigger: CTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATAC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTACGCCATTCTGTATaGACAGTCCTTTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTLRHSV*TVLWEG
Trigger: GCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTGGATGGGGGCTGAGTaGACACAGCAGGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERWMGAE*TQQELE
Trigger: TTCCAGCTCCTGCTGTGTCCACTCAGCCCCCATCCA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGGAGAGAGGAGTGCATaGATGGGGGCTGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERGERSA*MGAEWT
Trigger: TGTCCACTCAGCCCCCATCCATGCACTCCTCTCTCC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAACTTGTCTGGGAGCTaGCTTTGGTGGTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQNLSGS*LWWFID
Trigger: ATCAATGAACCACCAAAGCCAGCTCCCAGACAAGTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGTTCTAATCAGATGCTaGCAGCTGAGGACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSVLIRC*QLRTPQ
Trigger: CTGGGGAGTCCTCAGCTGCCAGCATCTGATTAGAAC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTTGTTTGTGTTGTCCCTaGGACCGACCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTCLCCP*DRPAAA
Trigger: GGCGGCAGCTGGTCGGTCTCAGGGACAACACAAACA...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAATTGGTCTGGCTGTGTaGAAGGATCGTCACGGAAAG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEIGLAV*KDRHGK
Trigger: CTTTCCGTGACGATCCTTTCACACAGCCAGACCAAT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATCAGATACCCCATTTTaGGTTCTCACTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSESDTPF*VLTAGW
Trigger: CCAGCCAGCAGTGAGAACTCAAAATGGGGTATCTGA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTCAGATACCCCATTTTaGGTTCTCACTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSSDTPF*VLTAGW
Trigger: CCAGCCAGCAGTGAGAACTCAAAATGGGGTATCTGA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCAAAGGGCTTGTTGTTaGCCAAGCATTGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSQRACC*PSIGCH
Trigger: GTGGCACCCAATGCTTGGTCAACAACAAGCCCTTTG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGGAAAAATATTGCTCTaGAAAGGATTCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQGKILL*KGFPKG
Trigger: CCCTTTGGGGAATCCTTTTCAGAGCAATATTTTTCC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAAAGGGGAGGAGAGATaGATAATGTTCTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQKGEER*IMFFPH
Trigger: ATGAGGGAAGAACATTATTCATCTCTCCTCCCCTTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTACTACAGCGCAGCGGATaGGGCGGGCCTCGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLLQRSG*GGPRLN
Trigger: ATTTAAGCGAGGCCCGCCGCATCCGCTGCGCTGTAG...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTACACCGGCTAGCTATTaGCTCCGTGAAGCGAGCATG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERTPASY*LREASM
Trigger: CATGCTCGCTTCACGGAGGCAATAGCTAGCCGGTGT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTACACACGTAACCAAATaGCCGGTTGTCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTTHVTK*PVVCHI
Trigger: GATGTGACAGACAACCGGGCATTTGGTTACGTGTGT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAACTGCTGGCTGGGTTTaGGAACTTGAAAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSETAGWV*ELEKGH
Trigger: ATGGCCCTTTTCAAGTTCGCAAACCCAGCCAGCAGT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGGCACAGCAGGTGGCTaGCGCAGTTGGAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERGTAGG*RSWKSL
Trigger: TAAGGATTTCCAACTGCGGCAGCCACCTGCTGTGCC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATTCCTCTGGATGGTCTaGAGACCAAGTTCAGAATTT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQFLWMV*RPSSEF
Trigger: AAATTCTGAACTTGGTCTGCAGACCATCCAGAGGAA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAAGGGATGTGGTGGCTaGATCTCCCAACCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERKGCGG*ISQPEG
Trigger: ACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAAAACCTCAGTACCAGTaGACACTTGGTGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEKPQYQ*TLGDTR
Trigger: CCTGGTGTCACCAAGTGTCCACTGGTACTGAGGTTT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGAAGAAGGTGTCGATTaGTCTGGCTGTGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTEEGVD*SGCVKG
Trigger: TCCTTTCACACAGCCAGACCAATCGACACCTTCTTC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGTATGGACAGTCCTTTaGGAGGGCTTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEVWTVL*EGFPQK
Trigger: CTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATAC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATGCCTCTTCCTGGTTTaGTACTTTGTGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSECLFLV*YFVEVG
Trigger: TCCCACCTCCACAAAGTACCAAACCAGGAAGAGGCA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTACCTGTGGGTGACGCCTaGCCTGAAGGTTCTGAGACG +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLPVGDA*PEGSET
Trigger: CGTCTCAGAACCTTCAGGCCAGGCGTCACCCACAGG...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAGATGCTGTGTTCCATaGTCCTGCCTGAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSRCCVP*SCLREC
Trigger: ACACTCCCTCAGGCAGGACCATGGAACACAGCATCT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGTTGACCACCCATCATaGCTCCCGGAGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERVDHPS*LPEPLK
Trigger: CTTCAATGGCTCCGGGAGCCATGATGGGTGGTCAAC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTGTTGACCAAGCATTaGGTGCCACAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTLLTKH*VPQMQK
Trigger: CTTCTGCATCTGTGGCACCCAATGCTTGGTCAACAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGCAGGGAAACTTGTCTaGGAGCTGGCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSAGKLV*ELALVV
Trigger: AACCACCAAAGCCAGCTCCCAGACAAGTTTCCCTGC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAAAAGGATTTCCAAATaGATCCCTATACATCTCAGA +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFKRISK*IPIHLR
Trigger: TCTGAGATGTATAGGGATCCATTTGGAAATCCTTTT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATATGAAGGGATGTGGTaGCTGCATCTCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEYEGMW*LHLPTR
Trigger: TCTGGTTGGGAGATGCAGCCACCACATCCCTTCATA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAAAAAGGTCCTTAAGTaGTTAGATTCCAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFKKVLK*LDSKVS
Trigger: AGACACTTTGGAATCTAACCACTTAAGGACCTTTTT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTTCAGCTCAAGAGAGTaGCCTCCTCTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSFSSRE*PPLPQE
Trigger: TTCCTGTGGAAGAGGAGGCCACTCTCTTGAGCTGAA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTACTGGGTTTGCGAACTTaGAAAGGGCCATGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLLGLRT*KGPWAC
Trigger: GCAGGCCCATGGCCCTTTTCAAGTTCGCAAACCCAG...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCTGGGTTTGCGAACTTaGAAAGGGCCATGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTLGLRT*KGPWAC
Trigger: GCAGGCCCATGGCCCTTTTCAAGTTCGCAAACCCAG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCAGGAGCACTTGTTTTaGAGAGATCCAGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSQEHLF*RDPEGW
Trigger: CCAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTCCATGGTCCTGCCTaGGGGAGTGTGACAGTTACA +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFHGPA*GSVTVT
Trigger: TGTAACTGTCACACTCCCTCAGGCAGGACCATGGAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAGGCTCCCGGAGCCATTaGAGGGGACTGATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLGSRSH*RGLIED
Trigger: GTCTTCAATCAGTCCCCTTCAATGGCTCCGGGAGCC...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGGGCTGACTAAAACCTaGAGGTTGACCACCCATCAT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSGLTKT*RLTTHH
Trigger: ATGATGGGTGGTCAACCTTCAGGTTTTAGTCAGCCC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGTGGGTCTAAGGCAGTaGAGGCATCACTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERVGLRQ*RHHWRC
Trigger: ACATCTCCAGTGATGCCTTCACTGCCTTAGACCCAC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAGAGTCCTTTGTTGCTaGGTTGAGTTCAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQRVLCC*VEFNFS
Trigger: AGAGAAATTGAACTCAACTCAGCAACAAAGGACTCT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTATCAGATGCTGGCAGCTaGGGACTCCCCAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLSDAGS*GLPRNV
Trigger: CACATTCCTGGGGAGTCCTCAGCTGCCAGCATCTGA...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR GCA 90 bp GAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGACTCAGGTCTGGCACATCATCAATaGCAATCAGCTTGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: ERRRGAEIQVANCWSDSGLAHHQ*QSAWPY
Trigger: ATAAGGCCAAGCTGATTGGCATTGATGATGTGCCAG...ACCTGAGTCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR GCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAACATTTTATCCCCTCTTaGATCTGGCACATCATCAAT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQHFIPS*IWHIIN
Trigger: ATTGATGATGTGCCAGATGCAAGAGGGGATAAAATG...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTACACACGTAACCAAATaGCCGGTTGTCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSTHVTK*PVVCHI
Trigger: GATGTGACAGACAACCGGGCATTTGGTTACGTGTGT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTAAAGTCATCATGGTCTaGATTCTCCTGAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTKVIMV*ILLRNA
Trigger: GGCATTCCTCAGGAGAATGCAGACCATGATGACTTT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp GGATGTTCATGCTCTATTACCTCCTATTCTGTTTTCTGCCTGTTACTTCTGGAGAAACCTCAGTACCAGTaGACACTTGGTGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GCSCSITSYSVFCLLLLEKPQYQ*TLGDTR
Trigger: CCTGGTGTCACCAAGTGTCCACTGGTACTGAGGTTT...CTCCAGAAGTAACAGGCAGAAAACAGAATAGGAGGTAATAGAGCATGAACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGGTCGGGCTGACCATTaGTTGCACTTGTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEGRADH*LHLFLL
Trigger: AAGTAGAAACAAGTGCAACCAATGGTCAGCCCGACC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTATCCCCTCTTGCATCTaGCACATCATCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTIPSCI*HIINAN
Trigger: ATTGGCATTGATGATGTGCCAGATGCAAGAGGGGAT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAGGTGTCGATTGGTCTaGCTGTGTGAAAGGATCGTC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSRCRLV*LCERIV
Trigger: GACGATCCTTTCACACAGCCAGACCAATCGACACCT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGAAGAAGGTGTCGATTaGTCTGGCTGTGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEEEGVD*SGCVKG
Trigger: TCCTTTCACACAGCCAGACCAATCGACACCTTCTTC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTCATGTGGTGAGGACTaGACAGAGCTTTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSSCGED*TELSKS
Trigger: GGACTTGGAAAGCTCTGTCCAGTCCTCACCACATGA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGGTACTTTGTGGAGGTaGGATAATGGCTATGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEGTLWR*DNGYGV
Trigger: GACTCCATAGCCATTATCCCACCTCCACAAAGTACC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATTGTTGACCAAGCATTaGGTGCCACAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSELLTKH*VPQMQK
Trigger: CTTCTGCATCTGTGGCACCCAATGCTTGGTCAACAA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAACACTGGAGATGTCCTTaGGAGGGCCAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKHWRCP*EGQLWE
Trigger: CTCCCAGAGCTGGCCCTCCCAAGGACATCTCCAGTG...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGTGGCTGCCGCAGTTaGAAATCCTTAAACATTTCT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGGCRS*KSLNIS
Trigger: AGAAATGTTTAAGGATTTCCAACTGCGGCAGCCACC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGGAGCTGGCTTTGGTaGTTCATTGATCTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGSWLW*FIDLVQ
Trigger: TTGAACAAGATCAATGAACCACCAAAGCCAGCTCCC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTAACTTGTCTGGGAGCTaGCTTTGGTGGTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTNLSGS*LWWFID
Trigger: ATCAATGAACCACCAAAGCCAGCTCCCAGACAAGTT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAGAAAAGGACAATCTTaGCCTTGGGAGAAATTGATC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQRKGQS*PWEKLI
Trigger: GATCAATTTCTCCCAAGGCCAAGATTGTCCTTTTCT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAACGACATTGAGATTGTaGCTGCAAGAAAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQTTLRL*LQEKFS
Trigger: GGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTATGGAGTCATGTGGTaGGGACTGGACAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERYGVMW*GLDRAF
Trigger: GAAAGCTCTGTCCAGTCCTCACCACATGACTCCATA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTAAGCAAGTCATTGGCTaGAGACTTAGCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSKQVIG*RLSSPS
Trigger: AGAAGGACTGCTAAGTCTTCAGCCAATGACTTGCTT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAGGAGCAAAGATGTCTaGTGCAAGCAAGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSRSKDV*CKQVIG
Trigger: GCCAATGACTTGCTTGCATCAGACATCTTTGCTCCT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCTGCCTGAGGGAGTGTaGCAGTTACACCACCTAGAC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTLPEGV*QLHHLD
Trigger: GTCTAGGTGGTGTAACTGTCACACTCCCTCAGGCAG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGCCATTGAAGGGGACTaGTTGAAGACCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSAIEGD*LKTKDA
Trigger: AGCATCTTTGGTCTTCAATCAGTCCCCTTCAATGGC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGCTTTGGTGGTTCATTaGTCTTGTTCAATAGTTGAT +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQALVVH*SCSIVD
Trigger: ATCAACTATTGAACAAGATCAATGAACCACCAAAGC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGGGCTGACCATTGGTTaGACTTGTTTCTACTTCGTT +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSGLTIG*TCFYFV
Trigger: AACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp ACTTTGAGAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGAACACACGTAACCAAATaGCCGGTTGTCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: TLRTKKGSRNSSSKLLVRTHVTK*PVVCHI
Trigger: GATGTGACAGACAACCGGGCATTTGGTTACGTGTGT...TCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTCTCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCACACACGTAACCAAATaGCCGGTTGTCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSTHVTK*PVVCHI
Trigger: GATGTGACAGACAACCGGGCATTTGGTTACGTGTGT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTATTCAGGCAAGAAGGATaGCTGAGGCGTTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLFRQEG*LRRWSR
Trigger: CCTCGACCAACGCCTCAGGCATCCTTCTTGCCTGAA...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR GCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTATTTTGAGTTCTCACTaGTGGCTGGGTTTGCGAACT +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSILSSH*WLGLRT
Trigger: AGTTCGCAAACCCAGCCAGCAGTGAGAACTCAAAAT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR GCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATCCAGAGGGTTGGGCTaGAGGGCTGTAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKSRGLG*RAVGCP
Trigger: AGGACAACCTACAGCCCTGCAGCCCAACCCTCTGGA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAATTGAAGACCAAAGATaGTGTGTTCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEIEDQR*CVPWSC
Trigger: GCAGGACCATGGAACACAGCATCTTTGGTCTTCAAT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAAAAGTCATCATGGTCTaGATTCTCCTGAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEKVIMV*ILLRNA
Trigger: GGCATTCCTCAGGAGAATGCAGACCATGATGACTTT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAAACCTCAGTACCAGTaGACACTTGGTGACACCAGG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERKPQYQ*TLGDTR
Trigger: CCTGGTGTCACCAAGTGTCCACTGGTACTGAGGTTT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTATCCCCTCTTGCATCTaGCACATCATCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSIPSCI*HIINAN
Trigger: ATTGGCATTGATGATGTGCCAGATGCAAGAGGGGAT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAGGTGTCGATTGGTCTaGCTGTGTGAAAGGATCGTC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERRCRLV*LCERIV
Trigger: GACGATCCTTTCACACAGCCAGACCAATCGACACCT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCATGTGGTGAGGACTaGACAGAGCTTTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSCGED*TELSKS
Trigger: GGACTTGGAAAGCTCTGTCCAGTCCTCACCACATGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTGGTTTGGTACTTTGTaGAGGTGGGATAATGGCTAT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTWFGTL*RWDNGY
Trigger: ATAGCCATTATCCCACCTCCACAAAGTACCAAACCA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTTGTTGACCAAGCATTaGGTGCCACAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSLLTKH*VPQMQK
Trigger: CTTCTGCATCTGTGGCACCCAATGCTTGGTCAACAA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATCTGGGAGCTGGCTTTaGTGGTTCATTGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSESGSWL*WFIDLV
Trigger: AACAAGATCAATGAACCACCAAAGCCAGCTCCCAGA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTAGTAGATTTGGTAACTaGCAGGGAAACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSSRFGN*QGNLSG
Trigger: CCCAGACAAGTTTCCCTGCCAGTTACCAAATCTACT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAAATCAGAACGTGTCTaGCTATCAGCTTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQKSERV*LSALFL
Trigger: CAAAAACAAAGCTGATAGCCAGACACGTTCTGATTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGACAATCTTGGCCTTaGGAGAAATTGATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGQSWP*EKLIFR
Trigger: TCTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTCAGCTCAAGAGAGTaGCCTCCTCTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFSSRE*PPLPQE
Trigger: TTCCTGTGGAAGAGGAGGCCACTCTCTTGAGCTGAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGACTGAAAATGAACTaGGAACGTTTCCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGLKMN*ERFQVV
Trigger: CACAACTTGGAAACGTTCCCAGTTCATTTTCAGTCC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTACACCATCGCCTTTaGACCTTGCTAAGAGATATT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTLHHRL*TLLRDI
Trigger: AATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp GAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGACTCAGGTTTACACCATCGCCTTTaGACCTTGCTAAGAGATATT +
Preference number: 4 (lower is better)
Translates to: ERRRGAEIQVANCWSDSGLHHRL*TLLRDI
Trigger: AATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAA...ACCTGAGTCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAGGAGCAAAGATGTCTaGTGCAAGCAAGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERRSKDV*CKQVIG
Trigger: GCCAATGACTTGCTTGCATCAGACATCTTTGCTCCT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGCCATTGAAGGGGACTaGTTGAAGACCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERAIEGD*LKTKDA
Trigger: AGCATCTTTGGTCTTCAATCAGTCCCCTTCAATGGC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTAGGCTGGTTCCAACCTaGAACAGCTGGACTTGTACC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTRLVPT*NSWTCT
Trigger: GGTACAAGTCCAGCTGTTTCAGGTTGGAACCAGCCT...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCAAAGGGCTTGTTGTTaGCCAAGCATTGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTQRACC*PSIGCH
Trigger: GTGGCACCCAATGCTTGGTCAACAACAAGCCCTTTG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGGAAAAATATTGCTCTaGAAAGGATTCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSGKILL*KGFPKG
Trigger: CCCTTTGGGGAATCCTTTTCAGAGCAATATTTTTCC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGTGGGTCTAAGGCAGTaGAGGCATCACTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTVGLRQ*RHHWRC
Trigger: ACATCTCCAGTGATGCCTTCACTGCCTTAGACCCAC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCCTTTGTTGCTGAGTTaGGTTCAATTTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTPLLLS*VQFLLN
Trigger: GTTCAAGAGAAATTGAACTCAACTCAGCAACAAAGG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAACATTGGATGTGGCTaGTTAACTCCCACAAGAACC +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSNIGCG*LTPTRT
Trigger: GGTTCTTGTGGGAGTTAATCAGCCACATCCAATGTT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGTCTTGTTTAGCTTCTaGGCATCACCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERVLFSF*ASPSSS
Trigger: GGAAGAAGAGGGTGATGCTCAGAAGCTAAACAAGAC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp ACTTTGAGAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGAGGGCTGACCATTGGTTaGACTTGTTTCTACTTCGTT +
Preference number: 4 (lower is better)
Translates to: TLRTKKGSRNSSSKLLVRGLTIG*TCFYFV
Trigger: AACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCC...TCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTCTCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCTGGCACATCATCAATaGCAATCAGCTTGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSLAHHQ*QSAWPY
Trigger: ATAAGGCCAAGCTGATTGGCATTGATGATGTGCCAG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTAATGGTTCAGCCTGTTaGCCGGTTTTTATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSNGSAC*PVFMAK
Trigger: TTTTGCCATAAAAACCGGGCAACAGGCTGAACCATT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAAATGGTTCAGCCTGTTaGCCGGTTTTTATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSENGSAC*PVFMAK
Trigger: TTTTGCCATAAAAACCGGGCAACAGGCTGAACCATT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCATTCTCAACTGCTTTaGTGGCTTCCTCTATCTTTT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTHSQLL*WLPLSF
Trigger: AAAAGATAGAGGAAGCCAGCAAAGCAGTTGAGAATG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTATGTGTTCCATGGTCCTaGCTGAGGGAGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLCVPWS*LRECDS
Trigger: ACTGTCACACTCCCTCAGGCAGGACCATGGAACACA...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAGGCACAGCAGGTGGCTaGCGCAGTTGGAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKGTAGG*RSWKSL
Trigger: TAAGGATTTCCAACTGCGGCAGCCACCTGCTGTGCC...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTTCCTCTGGATGGTCTaGAGACCAAGTTCAGAATTT +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSFLWMV*RPSSEF
Trigger: AAATTCTGAACTTGGTCTGCAGACCATCCAGAGGAA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTGGTTTGGTACTTTGTaGAGGTGGGATAATGGCTAT +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSWFGTL*RWDNGY
Trigger: ATAGCCATTATCCCACCTCCACAAAGTACCAAACCA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGGTGGCTGCCGCAGTTaGAAATCCTTAAACATTTCT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSGGCRS*KSLNIS
Trigger: AGAAATGTTTAAGGATTTCCAACTGCGGCAGCCACC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAACTTGTCTGGGAGCTaGCTTTGGTGGTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSNLSGS*LWWFID
Trigger: ATCAATGAACCACCAAAGCCAGCTCCCAGACAAGTT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAGTAGATTTGGTAACTaGCAGGGAAACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSSRFGN*QGNLSG
Trigger: CCCAGACAAGTTTCCCTGCCAGTTACCAAATCTACT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATTTTATTCCTCTGGATaGTCTGCAGACCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEFYSSG*SADQVQ
Trigger: CTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAACCTTTTTATTCCTCTaGATGGTCTGCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSETFLFL*MVCRPS
Trigger: ACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGGACAATCTTGGCCTTaGGAGAAATTGATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEGQSWP*EKLIFR
Trigger: TCTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp GATGTTCATGCTCTATTACCTCCTATTCTGTTTTCTGCCTGTTACTTCTGGAGATTGGTCAGACTCAGGTaGTCAGAGAGGTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: DVHALLPPILFSACYFWRLVRLR*SERYQQ
Trigger: TTGCTGATACCTCTCTGACCACCTGAGTCTGACCAA...TCTCCAGAAGTAACAGGCAGAAAACAGAATAGGAGGTAATAGAGCATGAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CCA 90 bp ACTTTGAGAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGACAAGTAGCAAATTGTTaGTCAGACTCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TLRTKKGSRNSSSKLLVRQVANC*SDSGGQ
Trigger: CTGACCACCTGAGTCTGACCAACAATTTGCTACTTG...TCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTCTCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATTACACCATCGCCTTTaGACCTTGCTAAGAGATATT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSELHHRL*TLLRDI
Trigger: AATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGAAGAGAACAGGAGGTaGTGCCGTTTGTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSEREENRR*CRLLRM
Trigger: CATTCTTAACAAACGGCATCACCTCCTGTTCTCTTC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTCTGATCTGGAGATTTaGGAGAATCAAACGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSSDLEI*ENQTKK
Trigger: CTTCTTCGTTTGATTCTCTCAAATCTCCAGATCAGA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTACAGGAGCACTTGTTTTaGAGAGATCCAGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLQEHLF*RDPEGW
Trigger: CCAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTG...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGGGCTGACTAAAACCTaGAGGTTGACCACCCATCAT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTGLTKT*RLTTHH
Trigger: ATGATGGGTGGTCAACCTTCAGGTTTTAGTCAGCCC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATTTCTTTCACATCCTTaGTCTCTTTATCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEFLSHP*SLYPQV
Trigger: CACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTYQLCF*LLRPTF
Trigger: AAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAGAGTCTGTTGCTTGTaGAAGGGTGGTAATACTACT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSRVCCL*KGGNTT
Trigger: AGTAGTATTACCACCCTTTCACAAGCAACAGACTCT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTCCTTTGTTGCTGAGTTaGGTTCAATTTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSPLLLS*VQFLLN
Trigger: GTTCAAGAGAAATTGAACTCAACTCAGCAACAAAGG...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAAGAGTCCTTTGTTGCTaGGTTGAGTTCAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSERVLCC*VEFNFS
Trigger: AGAGAAATTGAACTCAACTCAGCAACAAAGGACTCT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAACATTTTATCCCCTCTTaGATCTGGCACATCATCAAT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEHFIPS*IWHIIN
Trigger: ATTGATGATGTGCCAGATGCAAGAGGGGATAAAATG...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTTACTGGATGTTCATaGTCTATTACCCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTFTGCS*SITPVF
Trigger: GAAAACTGGGGTAATAGAGCATGAACATCCAGTAAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAACTCTTGAACATTAACTaGTCTTCTGGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSELLNIN*SSGTSA
Trigger: AGCTGAAGTTCCAGAAGAGCAGTTAATGTTCAAGAG...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAACCAGGATGTTTTTGCTaGCTGGGCTTGGTAACTCCC +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKPGCFC*LGLVTP
Trigger: GGGAGTTACCAAGCCCAGGCAGCAAAAACATCCTGG...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCAATGCCAATCAGCTTaGCCTTATATTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTQCQSA*PYILHH
Trigger: ATGGTGTAAAATATAAGGCCAAGCTGATTGGCATTG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGACTCAGGTGGTCACAATGCCAATCAGCTTaGCCTTATATTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: KKGSRNSSSKLLVRLRWSQCQSA*PYILHH
Trigger: ATGGTGTAAAATATAAGGCCAAGCTGATTGGCATTG...TGACCACCTGAGTCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CCA 90 bp CGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTGGATGTTCAATCCCCTCTTGCATCTaGCACATCATCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: RLSVTSRAMKEILFTGCSIPSCI*HIINAN
Trigger: ATTGGCATTGATGATGTGCCAGATGCAAGAGGGGAT...TGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCCAAACAAATCCATCTaGTCAACACCCGATTTCAGT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSPNKSI*STPDFS
Trigger: ACTGAAATCGGGTGTTGACCAGATGGATTTGTTTGG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000339788.10
CDS-3UTR CCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAAGGTGTCGATTGGTCTaGCTGTGTGAAAGGATCGTC +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLRCRLV*LCERIV
Trigger: GACGATCCTTTCACACAGCCAGACCAATCGACACCT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTTCATGTGGTGAGGACTaGACAGAGCTTTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTSCGED*TELSKS
Trigger: GGACTTGGAAAGCTCTGTCCAGTCCTCACCACATGA...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCTGGGAGCTGGCTTTaGTGGTTCATTGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSGSWL*WFIDLV
Trigger: AACAAGATCAATGAACCACCAAAGCCAGCTCCCAGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAGTAGATTTGGTAACTaGCAGGGAAACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSRFGN*QGNLSG
Trigger: CCCAGACAAGTTTCCCTGCCAGTTACCAAATCTACT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTATAATACGTCAAAGCTaGAACAAGGGCAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSIIRQS*NKGRNQ
Trigger: CTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTAT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAACGACATTGAGATTGTaGCTGCAAGAAAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSETTLRL*LQEKFS
Trigger: GGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTACGACATTGAGATTGTaGCTGCAAGAAAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSTTLRL*LQEKFS
Trigger: GGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR CAA 72 bp CAAGGGCAGAAATCAGAACGTGTCTGGCTATCAGCTTaGTTTTTGACTACTAAGGCCAACCTTTTTATTCCT +
Preference number: 4 (lower is better)
Translates to: QGQKSERVWLSA*FLTTKANLFIP
Trigger: AGGAATAAAAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGACACGTTCTGATTTCTGCCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGCTTTGGTGGTTCATTaGTCTTGTTCAATAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEALVVH*SCSIVD
Trigger: ATCAACTATTGAACAAGATCAATGAACCACCAAAGC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAGAGTCTGTTGCTTGTaGAAGGGTGGTAATACTACT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERRVCCL*KGGNTT
Trigger: AGTAGTATTACCACCCTTTCACAAGCAACAGACTCT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGTCTTGTTTAGCTTCTaGGCATCACCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTVLFSF*ASPSSS
Trigger: GGAAGAAGAGGGTGATGCTCAGAAGCTAAACAAGAC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCATTTTATCCCCTCTTaGATCTGGCACATCATCAAT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSHFIPS*IWHIIN
Trigger: ATTGATGATGTGCCAGATGCAAGAGGGGATAAAATG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATTTACTGGATGTTCATaGTCTATTACCCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEFTGCS*SITPVF
Trigger: GAAAACTGGGGTAATAGAGCATGAACATCCAGTAAA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp CGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTGGATGTTCAAATGGTTCAGCCTGTTaGCCGGTTTTTATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: RLSVTSRAMKEILFTGCSNGSAC*PVFMAK
Trigger: TTTTGCCATAAAAACCGGGCAACAGGCTGAACCATT...TGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTCCTCTGGATGGTCTaGAGACCAAGTTCAGAATTT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFLWMV*RPSSEF
Trigger: AAATTCTGAACTTGGTCTGCAGACCATCCAGAGGAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTCCAAACAAATCCATCTaGTCAACACCCGATTTCAGT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERPNKSI*STPDFS
Trigger: ACTGAAATCGGGTGTTGACCAGATGGATTTGTTTGG...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000339788.10
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGTTCTCACTGCTGGCTaGGTTTGCGAACTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTVLTAG*VCELEK
Trigger: CTTTTCAAGTTCGCAAACCCAGCCAGCAGTGAGAAC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATTACGCCATTCTGTATaGACAGTCCTTTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKLRHSV*TVLWEG
Trigger: GCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGGTACTTTGTGGAGGTaGGATAATGGCTATGGAGTC +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTGTLWR*DNGYGV
Trigger: GACTCCATAGCCATTATCCCACCTCCACAAAGTACC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTTTATTCCTCTGGATaGTCTGCAGACCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFYSSG*SADQVQ
Trigger: CTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTACCTTTTTATTCCTCTaGATGGTCTGCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERTFLFL*MVCRPS
Trigger: ACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAAAATCAGAACGTGTCTaGCTATCAGCTTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEKSERV*LSALFL
Trigger: CAAAAACAAAGCTGATAGCCAGACACGTTCTGATTT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATATGAAGGGATGTGGTaGCTGCATCTCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKYEGMW*LHLPTR
Trigger: TCTGGTTGGGAGATGCAGCCACCACATCCCTTCATA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTAAAAAGGTCCTTAAGTaGTTAGATTCCAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTKKVLK*LDSKVS
Trigger: AGACACTTTGGAATCTAACCACTTAAGGACCTTTTT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATTCAGCTCAAGAGAGTaGCCTCCTCTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKFSSRE*PPLPQE
Trigger: TTCCTGTGGAAGAGGAGGCCACTCTCTTGAGCTGAA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAGAAGAGAACAGGAGGTaGTGCCGTTTGTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLEENRR*CRLLRM
Trigger: CATTCTTAACAAACGGCATCACCTCCTGTTCTCTTC...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCTGATCTGGAGATTTaGGAGAATCAAACGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSDLEI*ENQTKK
Trigger: CTTCTTCGTTTGATTCTCTCAAATCTCCAGATCAGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAGGAGCAAAGATGTCTaGTGCAAGCAAGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKRSKDV*CKQVIG
Trigger: GCCAATGACTTGCTTGCATCAGACATCTTTGCTCCT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTTCTTTCACATCCTTaGTCTCTTTATCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFLSHP*SLYPQV
Trigger: CACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGCTTTGGTGGTTCATTaGTCTTGTTCAATAGTTGAT +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSALVVH*SCSIVD
Trigger: ATCAACTATTGAACAAGATCAATGAACCACCAAAGC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAACTCCCACAAGAACCTaGGCATTAAGGGTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKTPTRT*ALRVKR
Trigger: TCTCTTGACCCTTAATGCTCAGGTTCTTGTGGGAGT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCTGGCACATCATCAATaGCAATCAGCTTGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTLAHHQ*QSAWPY
Trigger: ATAAGGCCAAGCTGATTGGCATTGATGATGTGCCAG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTCATTCTCAACTGCTTTaGTGGCTTCCTCTATCTTTT +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERHSQLL*WLPLSF
Trigger: AAAAGATAGAGGAAGCCAGCAAAGCAGTTGAGAATG...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAAAAGTCATCATGGTCTaGATTCTCCTGAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLKVIMV*ILLRNA
Trigger: GGCATTCCTCAGGAGAATGCAGACCATGATGACTTT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGGTGGCTGCCGCAGTTaGAAATCCTTAAACATTTCT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTGGCRS*KSLNIS
Trigger: AGAAATGTTTAAGGATTTCCAACTGCGGCAGCCACC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGGGAGCTGGCTTTGGTaGTTCATTGATCTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTGSWLW*FIDLVQ
Trigger: TTGAACAAGATCAATGAACCACCAAAGCCAGCTCCC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTAGTAGATTTGGTAACTaGCAGGGAAACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTSRFGN*QGNLSG
Trigger: CCCAGACAAGTTTCCCTGCCAGTTACCAAATCTACT...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTAAAAGGATTTCCAAATaGATCCCTATACATCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQNCAHNRTENELGTFPSKRISK*IPIHLR
Trigger: TCTGAGATGTATAGGGATCCATTTGGAAATCCTTTT...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCAAATCAGAACGTGTCTaGCTATCAGCTTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSKSERV*LSALFL
Trigger: CAAAAACAAAGCTGATAGCCAGACACGTTCTGATTT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAGAAAAGGACAATCTTaGCCTTGGGAGAAATTGATC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERRKGQS*PWEKLI
Trigger: GATCAATTTCTCCCAAGGCCAAGATTGTCCTTTTCT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
3UTR CAA 72 bp CAGAAATCAGAACGTGTCTGGCTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTTTTTATTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: QKSERVWLSALF*TTKANLFIPLD
Trigger: ATCCAGAGGAATAAAAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGACACGTTCTGATTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR TCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCTCTTAAAGAATTCTaGTTGGTGTCGATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSLKEF*LVSISE
Trigger: CTCTGAAATCGACACCAATCAGAATTCTTTAAGAGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAGGGCTGACCATTGGTTaGACTTGTTTCTACTTCGTT +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKGLTIG*TCFYFV
Trigger: AACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCC...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTTACTGGATGTTCATaGTCTATTACCCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFTGCS*SITPVF
Trigger: GAAAACTGGGGTAATAGAGCATGAACATCCAGTAAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR GCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAAATGGTTCAGCCTGTTaGCCGGTTTTTATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLNGSAC*PVFMAK
Trigger: TTTTGCCATAAAAACCGGGCAACAGGCTGAACCATT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp GGATGTTCATGCTCTATTACCTCCTATTCTGTTTTCTGCCTGTTACTTCTGGAGTTTACTGGATGTTCATaGTCTATTACCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: GCSCSITSYSVFCLLLLEFTGCS*SITSYS
Trigger: AGAATAGGAGGTAATAGAGCATGAACATCCAGTAAA...CTCCAGAAGTAACAGGCAGAAAACAGAATAGGAGGTAATAGAGCATGAACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAACCTTTTTATTCCTCTaGATGGTCTGCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLTFLFL*MVCRPS
Trigger: ACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGGACAATCTTGGCCTTaGGAGAAATTGATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTGQSWP*EKLIFR
Trigger: TCTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGGACTGAAAATGAACTaGGAACGTTTCCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTGLKMN*ERFQVV
Trigger: CACAACTTGGAAACGTTCCCAGTTCATTTTCAGTCC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTACAAAACAGTTGTGTaGCTGATCATGACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSYKTVV*LIMTFK
Trigger: TTTGAAAGTCATGATCAGCCACACAACTGTTTTGTA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTTTACACCATCGCCTTTaGACCTTGCTAAGAGATATT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTLHHRL*TLLRDI
Trigger: AATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAA...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTATTACACCATCGCCTTTaGACCTTGCTAAGAGATATT +
Preference number: 4 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLLHHRL*TLLRDI
Trigger: AATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAA...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAAAGGGGAGGAGAGATaGATAATGTTCTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKKGEER*IMFFPH
Trigger: ATGAGGGAAGAACATTATTCATCTCTCCTCCCCTTT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp CTGCCTGTTACTTCTGGAGATGTAATATATGATATATTTGTTCCCCACAGAACTCATTTTATCCCCTCTTaGATCTGGCACATCATCAAT +
Preference number: 4 (lower is better)
Translates to: LPVTSGDVIYDIFVPHRTHFIPS*IWHIIN
Trigger: ATTGATGATGTGCCAGATGCAAGAGGGGATAAAATG...AGTTCTGTGGGGAACAAATATATCATATATTACATCTCCAGAAGTAACAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR GCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCATTCTCAACTGCTTTaGTGGCTTCCTCTATCTTTT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTHSQLL*WLPLSF
Trigger: AAAAGATAGAGGAAGCCAGCAAAGCAGTTGAGAATG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR GCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCTCTTGAACATTAACTaGTCTTCTGGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTLLNIN*SSGTSA
Trigger: AGCTGAAGTTCCAGAAGAGCAGTTAATGTTCAAGAG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTACAAAACAGTTGTGTaGCTGATCATGACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NKATDNTSKLEQGQKSERYKTVV*LIMTFK
Trigger: TTTGAAAGTCATGATCAGCCACACAACTGTTTTGTA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTATGCAAGCAAGTCATTaGCTGAAGATGTTGGACTAT +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTMQASH*LKMLDY
Trigger: ATAGTCCAACATCTTCAGCCAATGACTTGCTTGCAT...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339788.10
CDS-3UTR TCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAGAGTCCTTTGTTGCTaGGTTGAGTTCAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKRVLCC*VEFNFS
Trigger: AGAGAAATTGAACTCAACTCAGCAACAAAGGACTCT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAGAAAAGGACAATCTTaGCCTTGGGAGAAATTGATC +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKRKGQS*PWEKLI
Trigger: GATCAATTTCTCCCAAGGCCAAGATTGTCCTTTTCT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR TCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATATCAGCTTTGTTTTTaGCTACTAAGGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKYQLCF*LLRPTF
Trigger: AAAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAACAATGCCAATCAGCTTaGCCTTATATTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKQCQSA*PYILHH
Trigger: ATGGTGTAAAATATAAGGCCAAGCTGATTGGCATTG...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTAAAAGGATTTCCAAATaGATCCCTATACATCTCAGA +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTKRISK*IPIHLR
Trigger: TCTGAGATGTATAGGGATCCATTTGGAAATCCTTTT...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTTACAAAACAGTTGTGTaGCTGATCATGACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: CSTITFRFYALKQNPQTTYKTVV*LIMTFK
Trigger: TTTGAAAGTCATGATCAGCCACACAACTGTTTTGTA...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CCA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAAAAGGATTTCCAAATaGATCCCTATACATCTCAGA +
Preference number: 4 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKKRISK*IPIHLR
Trigger: TCTGAGATGTATAGGGATCCATTTGGAAATCCTTTT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS GCA 90 bp CATGACTTCCCCGCGCCCGGAGCCTCCAGGCTACAGCGCAGCGGATaGGGCGGGCCTCGCTTAAATAGCCGCCGGCCGGGAGCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: HDFPAPGASRLQRSG*GGPRLNSRRPGASE
Trigger: CTCCGAAGCTCCCGGCCGGCGGCTATTTAAGCGAGGCCCGCCGCATCCGCTGCGCTGTAGCCTGGAGGCTCCGGGCGCGGGGAAGTCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000502388.1
ENST00000515700.5
ENST00000545653.5
CDS GCA 90 bp ACTGGGGCAGGAGCACTTGTTTTGAAGAGATCCAGAGGGTTGGGCTaGAGGGCTGTAGGTTGTCCTGTGGGTGACGCCTGGCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: TGAGALVLKRSRGLG*RAVGCPVGDAWPEG
Trigger: ACCTTCAGGCCAGGCGTCACCCACAGGACAACCTACAGCCCTGCAGCCCAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTGCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS GCA 90 bp GGAGCCGCGCGGCCACTCCCGGCGAGAGATATGGTTCTAATCAGATaGTGGCAGCTGAGGACTCCCCAGGAATGTGCCAGGATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GAARPLPARDMVLIR*WQLRTPQECARMFL
Trigger: CAAAAACATCCTGGCACATTCCTGGGGAGTCCTCAGCTGCCAGCATCTGATTAGAACCATATCTCTCGCCGGGAGTGGCCGCGCGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS CCA 90 bp AGAGGGTTGGGCTGCAGGGCTGTAGGTTGTCCTGTGGGTGACGCCTaGCCTGAAGGTTCTGAGACGGGAGGAGCAAAGATGTCTGATGCA +
Preference number: 5 (lower is better)
Translates to: RGLGCRAVGCPVGDA*PEGSETGGAKMSDA
Trigger: TGCATCAGACATCTTTGCTCCTCCCGTCTCAGAACCTTCAGGCCAGGCGTCACCCACAGGACAACCTACAGCCCTGCAGCCCAACCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CCA 90 bp GCCGCGCGGCCACTCCCGGCGAGAGATATGGTTCTAATCAGATGCTaGCAGCTGAGGACTCCCCAGGAATGTGCCAGGATGTTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: AARPLPARDMVLIRC*QLRTPQECARMFLL
Trigger: CAGCAAAAACATCCTGGCACATTCCTGGGGAGTCCTCAGCTGCCAGCATCTGATTAGAACCATATCTCTCGCCGGGAGTGGCCGCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGCACTGGAGGGGGAGTaGAGGCTGCAAAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFALEGE*RLQRVK
Trigger: CTTCACCCTTTGCAGCCTCAACTCCCCCTCCAGTGC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGAGTACCAGTGGACACTaGGTGACACCAGGCGATCCC +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVSTSGH*VTPGDP
Trigger: GGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTCTTTGAGGGTGCTTTaGGTGCGGCCTGTTGGTCGG +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFSLRVL*VRPVGR
Trigger: CCGACCAACAGGCCGCACCAAAAGCACCCTCAAAGA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTCTTTGAGGGTGCTTTaGGTGCGGCCTGTTGGTCGG +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVSLRVL*VRPVGR
Trigger: CCGACCAACAGGCCGCACCAAAAGCACCCTCAAAGA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGCTGGGTTTGCGAACTaGAAAAGGGCCATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFAGFAN*KRAMGL
Trigger: CAGGCCCATGGCCCTTTTCAAGTTCGCAAACCCAGC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS TCA 90 bp GTTGACCACCCATCATGGCTCCCGGAGCCATTGAAGGGGACTGATTaGAGACCAAAGATGCTGTGTTCCATGGTCCTGCCTGAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VDHPSWLPEPLKGTD*RPKMLCSMVLPEGV
Trigger: CACTCCCTCAGGCAGGACCATGGAACACAGCATCTTTGGTCTTCAATCAGTCCCCTTCAATGGCTCCGGGAGCCATGATGGGTGGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGGGTTCGGGGAGGATTaGACAGAGAAGCCGTTCTGT +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVGFGED*TEKPFC
Trigger: ACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACCC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGGGTTCGGGGAGGATTaGACAGAGAAGCCGTTCTGT +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFGFGED*TEKPFC
Trigger: ACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACCC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS TCA 90 bp AGATACCCCATTTTGAGTTCTCACTGCTGGCTGGGTTTGCGAACTTaGAAAGGGCCATGGGCCTGCCTGAGCTTCCTGTTTGCCAGTCCG +
Preference number: 5 (lower is better)
Translates to: RYPILSSHCWLGLRT*KGPWACLSFLFASP
Trigger: CGGACTGGCAAACAGGAAGCTCAGGCAGGCCCATGGCCCTTTTCAAGTTCGCAAACCCAGCCAGCAGTGAGAACTCAAAATGGGGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 90 bp AGGACTGGACAGAGCTTTCCAAGTCCTGCTTTACGCCATTCTGTATaGACAGTCCTTTGGGAGGGCTTCCCACAAAAGGGTTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RTGQSFPSPALRHSV*TVLWEGFPQKGSGR
Trigger: CCTCCCCGAACCCTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAAAGCAGGACTTGGAAAGCTCTGTCCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 90 bp ACAACAGGCACTGGAGGGGGAGTTGAGGCTGCAAAGGGTGAAGGCTaGTTCCAACCTGAAACAGCTGGACTTGTACCAAAAATGACGGGC +
Preference number: 5 (lower is better)
Translates to: TTGTGGGVEAAKGEG*FQPETAGLVPKMTG
Trigger: GCCCGTCATTTTTGGTACAAGTCCAGCTGTTTCAGGTTGGAACCAGCCTTCACCCTTTGCAGCCTCAACTCCCCCTCCAGTGCCTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGATCCTTTGTTTGTGTaGTCCCTGAGACCGACCAGC +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFDPLFV*SLRPTS
Trigger: GCTGGTCGGTCTCAGGGACAACACAAACAAAGGATC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCGGGCTGACCATTGGTaGCACTTGTTTCTACTTCGT +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVRADHW*HLFLLR
Trigger: ACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCCG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATCTTTGAGGGTGCTTTaGGTGCGGCCTGTTGGTCGG +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQSLRVL*VRPVGR
Trigger: CCGACCAACAGGCCGCACCAAAAGCACCCTCAAAGA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGCTGGGTTTGCGAACTaGAAAAGGGCCATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQAGFAN*KRAMGL
Trigger: CAGGCCCATGGCCCTTTTCAAGTTCGCAAACCCAGC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTGTATGGACAGTCCTTaGGGAGGGCTTCCCACAAAA +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFCMDSP*GGLPTK
Trigger: TTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTCCTGGTTTGGTACTTaGTGGAGGTGGGATAATGGC +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVSWFGT*WRWDNG
Trigger: GCCATTATCCCACCTCCACAAAGTACCAAACCAGGA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGTTGTTGACCAAGCATaGGGTGCCACAGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVVVDQA*GATDAE
Trigger: TTCTGCATCTGTGGCACCCAATGCTTGGTCAACAAC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCGATTCCCCAAAGGGCTaGTTGTTGACCAAGCATTGG +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFDSPKG*LLTKHW
Trigger: CCAATGCTTGGTCAACAACAAGCCCTTTGGGGAATC...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CCA 90 bp TTCGTTAGACATGGCAAGAAGGCAGGCAGCAAACCTCAGTACCAGTaGACACTTGGTGACACCAGGCGATCCCGATGGAGAAGTCTCAAA +
Preference number: 5 (lower is better)
Translates to: FVRHGKKAGSKPQYQ*TLGDTRRSRWRSLK
Trigger: TTTGAGACTTCTCCATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACTGAGGTTTGCTGCCTGCCTTCTTGCCATGTCTAACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000513052.1
ENST00000515700.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAACTGCCTCTTCCTGGTTaGGTACTTTGTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQLPLPG*VLCGGG
Trigger: CCCACCTCCACAAAGTACCAAACCAGGAAGAGGCAG...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTCACTGGAGATGTCCTaGGGAGGGCCAGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTSLEMS*GGPALG
Trigger: TCCCAGAGCTGGCCCTCCCAAGGACATCTCCAGTGA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCAGGTGGCTGCCGCAGTaGGAAATCCTTAAACATTTC +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFRWLPQ*EILKHF
Trigger: GAAATGTTTAAGGATTTCCAACTGCGGCAGCCACCT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGAGGTGGCTGCCGCAGTaGGAAATCCTTAAACATTTC +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVRWLPQ*EILKHF
Trigger: GAAATGTTTAAGGATTTCCAACTGCGGCAGCCACCT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCACAGGACTTTCTACTaGGGGCTAATCAATAGAGGG +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVHRTFY*GLINRG
Trigger: CCCTCTATTGATTAGCCCCAAGTAGAAAGTCCTGTG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAATTTTGCTGCCTGGGCTaGGTAACTCCCCCTCAACGT +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQFCCLG*VTPPQR
Trigger: ACGTTGAGGGGGAGTTACCAAGCCCAGGCAGCAAAA...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS TCA 90 bp GGTTTGCAGAGAACCAGCAGCCTGACAACCAGCCATCTCTCCTCTTaGTACCAGTGTTCAAGCAGGCTGAAGGTCAGAATCTTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: GLQRTSSLTTSHLSS*YQCSSRLKVRILAV
Trigger: AACTGCCAAGATTCTGACCTTCAGCCTGCTTGAACACTGGTATCAAGAGGAGAGATGGCTGGTTGTCAGGCTGCTGGTTCTCTGCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTAGTACCAGTGGACACTaGGTGACACCAGGCGATCCC +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTSTSGH*VTPGDP
Trigger: GGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGACTCAGGTTCTTTGAGGGTGCTTTaGGTGCGGCCTGTTGGTCGG +
Preference number: 5 (lower is better)
Translates to: ERRRGAEIQVANCWSDSGSLRVL*VRPVGR
Trigger: CCGACCAACAGGCCGCACCAAAAGCACCCTCAAAGA...ACCTGAGTCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCCCAGAAAGGGAAATGTaGACCCAGATCCTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFPEREM*TQILCL
Trigger: CAAACAAAGGATCTGGGTCAACATTTCCCTTTCTGG...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCCATTCTCAACTGCTTaGCTGGCTTCCTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVPFSTA*LASSIF
Trigger: AAAGATAGAGGAAGCCAGCAAAGCAGTTGAGAATGG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGCACTGGAGGGGGAGTaGAGGCTGCAAAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LQNCAHNRTENELGTFPSALEGE*RLQRVK
Trigger: CTTCACCCTTTGCAGCCTCAACTCCCCCTCCAGTGC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGGTCTGGCTATCAGCTTaGTTTTTGACTACTAAGGCC +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVVWLSA*FLTTKA
Trigger: GGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGAC...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTTTTGGTGCGGCCTGTaGGTCGGGCTGACCATTGGT +
Preference number: 5 (lower is better)
Translates to: LQNCAHNRTENELGTFPSFWCGL*VGLTIG
Trigger: ACCAATGGTCAGCCCGACCAACAGGCCGCACCAAAA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCTGCCTCTTCCTGGTTaGGTACTTTGTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTLPLPG*VLCGGG
Trigger: CCCACCTCCACAAAGTACCAAACCAGGAAGAGGCAG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGCAGGAGCACTTGTTTaGAAGAGATCCAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQAGALV*KRSRGL
Trigger: CAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTGC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAGTTGTTGACCAAGCATaGGGTGCCACAGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQVVDQA*GATDAE
Trigger: TTCTGCATCTGTGGCACCCAATGCTTGGTCAACAAC...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTTCCTACTAACGACATaGAGATTGTGGCTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFFLLTT*RLWLQE
Trigger: TTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS TCA 90 bp CCAGAAAGGGAAATGTTGACCCAGATCCTTTGTTTGTGTTGTCCCTaGGACCGACCAGCTGCCGCCATTCCCTTTAGTTTCATCATAGAG +
Preference number: 5 (lower is better)
Translates to: PEREMLTQILCLCCP*DRPAAAIPFSFIIE
Trigger: CTCTATGATGAAACTAAAGGGAATGGCGGCAGCTGGTCGGTCTCAGGGACAACACAAACAAAGGATCTGGGTCAACATTTCCCTTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000507539.5
ENST00000509337.5
ENST00000545653.5
CDS TCA 90 bp AAGTTGAGATTGGCAGAAAAGGCATTTTCAGGCAAGAAGGATGCCTaGGGCGTTGGTCGAGGAAGAGAACAGGAGGTGATGCCGTTTGTT +
Preference number: 5 (lower is better)
Translates to: KLRLAEKAFSGKKDA*GVGRGREQEVMPFV
Trigger: AACAAACGGCATCACCTCCTGTTCTCTTCCTCGACCAACGCCTCAGGCATCCTTCTTGCCTGAAAATGCCTTTTCTGCCAATCTCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS TCA 90 bp GGCCCAAATCAAGTGCAGTTTCCTCAGATATTCTCCACCCAACCCTaGTTATTACCATCTCCATCCTCCCTTGGTACTTCCTGCTCGAGA +
Preference number: 5 (lower is better)
Translates to: GPNQVQFPQIFSTQP*LLPSPSSLGTSCSR
Trigger: TCTCGAGCAGGAAGTACCAAGGGAGGATGGAGATGGTAATAATCAGGGTTGGGTGGAGAATATCTGAGGAAACTGCACTTGATTTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS TCA 90 bp GTGGCACATGATGGTTCTGGTTTCAGTTCTCACTACAAGAAGAAGTaGCTTGCTTGCCACAGCAGACAGAAGACCGCTGTTCTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: VAHDGSGFSSHYKKK*LACHSRQKTAVLSE
Trigger: CTCTGAGAGAACAGCGGTCTTCTGTCTGCTGTGGCAAGCAAGTCACTTCTTCTTGTAGTGAGAACTGAAACCAGAACCATCATGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS GCA 90 bp AAAGAAGTTGAGATTGGCAGAAAAGGCATTTTCAGGCAAGAAGGATaGCTGAGGCGTTGGTCGAGGAAGAGAACAGGAGGTGATGCCGTT +
Preference number: 5 (lower is better)
Translates to: KEVEIGRKGIFRQEG*LRRWSRKRTGGDAV
Trigger: AACGGCATCACCTCCTGTTCTCTTCCTCGACCAACGCCTCAGGCATCCTTCTTGCCTGAAAATGCCTTTTCTGCCAATCTCAACTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CCAAATGCCCGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTTTTTGGTGCGGCCTGTaGGTCGGGCTGACCATTGGT +
Preference number: 5 (lower is better)
Translates to: PNARLSVTSRAMKEILFTFWCGL*VGLTIG
Trigger: ACCAATGGTCAGCCCGACCAACAGGCCGCACCAAAA...AGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTTTTGGTGCGGCCTGTaGGTCGGGCTGACCATTGGT +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSFWCGL*VGLTIG
Trigger: ACCAATGGTCAGCCCGACCAACAGGCCGCACCAAAA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTTTACACCATCGCCTTaGAACCTTGCTAAGAGATAT +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFFTPSP*NLAKRY
Trigger: ATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTTACACCATCGCCTTaGAACCTTGCTAAGAGATAT +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVFTPSP*NLAKRY
Trigger: ATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAA...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCTCAATGCCAATCAGCTaGGCCTTATATTTTACACCA +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFSMPIS*ALYFTP
Trigger: TGGTGTAAAATATAAGGCCAAGCTGATTGGCATTGA...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGATCCTTTGTTTGTGTaGTCCCTGAGACCGACCAGC +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTDPLFV*SLRPTS
Trigger: GCTGGTCGGTCTCAGGGACAACACAAACAAAGGATC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGCTGGGTTTGCGAACTaGAAAAGGGCCATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSAGFAN*KRAMGL
Trigger: CAGGCCCATGGCCCTTTTCAAGTTCGCAAACCCAGC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGCACTGGAGGGGGAGTaGAGGCTGCAAAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERALEGE*RLQRVK
Trigger: CTTCACCCTTTGCAGCCTCAACTCCCCCTCCAGTGC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTCCCCAAAGGGCTTGTaGTTGACCAAGCATTGGGTG +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTSPKGL*LTKHWV
Trigger: CACCCAATGCTTGGTCAACAACAAGCCCTTTGGGGA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCACTGGAGATGTCCTaGGGAGGGCCAGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSLEMS*GGPALG
Trigger: TCCCAGAGCTGGCCCTCCCAAGGACATCTCCAGTGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGCTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVLSALF*TTKANL
Trigger: AAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAG...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCCTAACGACATTGAGATaGTGGCTGCAAGAAAAGTTT +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFLTTLR*WLQEKF
Trigger: AAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAG...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS CCA 90 bp ATTACCATCTCCATCCTCCCTTGGTACTTCCTGCTCGAGACACTTTaGCAGTCAATCACATGCTGCCCTGAACATTGCCATGTTTCATGT +
Preference number: 5 (lower is better)
Translates to: ITISILPWYFLLETL*QSITCCPEHCHVSC
Trigger: ACATGAAACATGGCAATGTTCAGGGCAGCATGTGATTGACTGCCAAAGTGTCTCGAGCAGGAAGTACCAAGGGAGGATGGAGATGGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS CCA 90 bp TTGCCGCTGGGTCACATTTCCACATCTGATATGATCTATTCGAGTTaGGGAAGACATCCACAACCAACATGGCAGTTAGGCTTCATCTCC +
Preference number: 5 (lower is better)
Translates to: LPLGHISTSDMIYSS*GRHPQPTWQLGFIS
Trigger: GGAGATGAAGCCTAACTGCCATGTTGGTTGTGGATGTCTTCCCCAACTCGAATAGATCATATCAGATGTGGAAATGTGACCCAGCGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAGTACCAGTGGACACTaGGTGACACCAGGCGATCCC +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSTSGH*VTPGDP
Trigger: GGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTTTGGTGCGGCCTGTaGGTCGGGCTGACCATTGGT +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFWCGL*VGLTIG
Trigger: ACCAATGGTCAGCCCGACCAACAGGCCGCACCAAAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTCGAAGAAGGTGTCGATaGGTCTGGCTGTGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: LQNCAHNRTENELGTFPSRRRCR*VWLCER
Trigger: CCTTTCACACAGCCAGACCAATCGACACCTTCTTCG...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAACGAAGAAGGTGTCGATaGGTCTGGCTGTGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSERRRCR*VWLCER
Trigger: CCTTTCACACAGCCAGACCAATCGACACCTTCTTCG...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGGGTTCGGGGAGGATTaGACAGAGAAGCCGTTCTGT +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSGFGED*TEKPFC
Trigger: ACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACCC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTGTATGGACAGTCCTTaGGGAGGGCTTCCCACAAAA +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTCMDSP*GGLPTK
Trigger: TTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTCCTGGTTTGGTACTTaGTGGAGGTGGGATAATGGC +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTSWFGT*WRWDNG
Trigger: GCCATTATCCCACCTCCACAAAGTACCAAACCAGGA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCTGCCTCTTCCTGGTTaGGTACTTTGTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSLPLPG*VLCGGG
Trigger: CCCACCTCCACAAAGTACCAAACCAGGAAGAGGCAG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGTTGTTGACCAAGCATaGGGTGCCACAGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTVVDQA*GATDAE
Trigger: TTCTGCATCTGTGGCACCCAATGCTTGGTCAACAAC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAACCAAAGGGCTTGTTGTaGACCAAGCATTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEPKGLL*TKHWVP
Trigger: TGGCACCCAATGCTTGGTCAACAACAAGCCCTTTGG...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATCCCCAAAGGGCTTGTaGTTGACCAAGCATTGGGTG +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSESPKGL*LTKHWV
Trigger: CACCCAATGCTTGGTCAACAACAAGCCCTTTGGGGA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGTTCTAGAAGGTTCATTTCTTTCACATCCTaGATCTCTTTATCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: VVAASPNQRVEGRCSRRFISFTS*ISLSPS
Trigger: ACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAAT...GAACCTTCTAGAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp GATATGAAGGGATGTGGTGGCTGCATCTCCCAACCAGAGGGTAGAAGGCAGGTGATTTCTTTCACATCCTaGATCTCTTTATCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: DMKGCGGCISQPEGRRQVISFTS*ISLSPS
Trigger: ACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAAT...CACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCTTCATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CCA 90 bp ATCTGGAGATTTGAGAGAATCAAACGAAGAAGGTGTCGATTGGTCTaGCTGTGTGAAAGGATCGTCACGGAAAGGATCAGGATTAGGGGT +
Preference number: 5 (lower is better)
Translates to: IWRFERIKRRRCRLV*LCERIVTERIRIRG
Trigger: ACCCCTAATCCTGATCCTTTCCGTGACGATCCTTTCACACAGCCAGACCAATCGACACCTTCTTCGTTTGATTCTCTCAAATCTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACCAAATGCCCGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACGATCCTTTGTTTGTGTaGTCCCTGAGACCGACCAGC +
Preference number: 5 (lower is better)
Translates to: TKCPVVCHITGNERNLIYDPLFV*SLRPTS
Trigger: GCTGGTCGGTCTCAGGGACAACACAAACAAAGGATC...GTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATCCTGGTTTGGTACTTaGTGGAGGTGGGATAATGGC +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSESWFGT*WRWDNG
Trigger: GCCATTATCCCACCTCCACAAAGTACCAAACCAGGA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGATGCAAGCAAGTCATaGGCTGAAGACTTAGCAGTC +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTDASKS*AEDLAV
Trigger: GACTGCTAAGTCTTCAGCCAATGACTTGCTTGCATC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAGCACTGGAGGGGGAGTaGAGGCTGCAAAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLALEGE*RLQRVK
Trigger: CTTCACCCTTTGCAGCCTCAACTCCCCCTCCAGTGC...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGATTCCCCAAAGGGCTaGTTGTTGACCAAGCATTGG +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEDSPKG*LLTKHW
Trigger: CCAATGCTTGGTCAACAACAAGCCCTTTGGGGAATC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTAGGTGGCTGCCGCAGTaGGAAATCCTTAAACATTTC +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTRWLPQ*EILKHF
Trigger: GAAATGTTTAAGGATTTCCAACTGCGGCAGCCACCT...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTGTGCCAGGATGTTTTaGCTGCCTGGGCTTGGTAAC +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSCARMF*LPGLGN
Trigger: GTTACCAAGCCCAGGCAGCAAAAACATCCTGGCACA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS TCA 90 bp TTAACCTTCCATGAGAGACTTGCCGCTGGGTCACATTTCCACATCTaGTATGATCTATTCGAGTTGGGGAAGACATCCACAACCAACATG +
Preference number: 5 (lower is better)
Translates to: LTFHERLAAGSHFHI*YDLFELGKTSTTNM
Trigger: CATGTTGGTTGTGGATGTCTTCCCCAACTCGAATAGATCATATCAGATGTGGAAATGTGACCCAGCGGCAAGTCTCTCATGGAAGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS CCA 90 bp ACTCAGCGGAGTAGACGAGCTACTCGAATTCTCTTTCTTCTGATCTaGAGATTTGAGAGAATCAAACGAAGAAGGTGTCGATTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TQRSRRATRILFLLI*RFERIKRRRCRLVW
Trigger: CCAGACCAATCGACACCTTCTTCGTTTGATTCTCTCAAATCTCCAGATCAGAAGAAAGAGAATTCGAGTAGCTCGTCTACTCCGCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTGCCTGTTACTTCTGGAGATGTAATATATGATATATTTGTTCCCCACAGAACTAGTACCAGTGGACACTaGGTGACACCAGGCGATCCC +
Preference number: 5 (lower is better)
Translates to: LPVTSGDVIYDIFVPHRTSTSGH*VTPGDP
Trigger: GGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACT...AGTTCTGTGGGGAACAAATATATCATATATTACATCTCCAGAAGTAACAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCCCCAAAGGGCTTGTaGTTGACCAAGCATTGGGTG +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSPKGL*LTKHWV
Trigger: CACCCAATGCTTGGTCAACAACAAGCCCTTTGGGGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGATTCCCCAAAGGGCTaGTTGTTGACCAAGCATTGG +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSDSPKG*LLTKHW
Trigger: CCAATGCTTGGTCAACAACAAGCCCTTTGGGGAATC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATCACTGGAGATGTCCTaGGGAGGGCCAGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKSLEMS*GGPALG
Trigger: TCCCAGAGCTGGCCCTCCCAAGGACATCTCCAGTGA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAAAGCACCTAATGTGTTaGGCACAATCACATTTAGCT +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQKHLMC*AQSHLA
Trigger: AGCTAAATGTGATTGTGCCAAACACATTAGGTGCTT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGATGCAAGCAAGTCATaGGCTGAAGATGTTGGACTA +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTDASKS*AEDVGL
Trigger: TAGTCCAACATCTTCAGCCAATGACTTGCTTGCATC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339788.10
CDS-3UTR CAA 90 bp GAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGACTCAGGTTCAAGTAGCAAATTGTaGGTCAGACTCAGGTGGTCA +
Preference number: 5 (lower is better)
Translates to: ERRRGAEIQVANCWSDSGSSSKL*VRLRWS
Trigger: TGACCACCTGAGTCTGACCAACAATTTGCTACTTGA...ACCTGAGTCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp GATGTTCATGCTCTATTACCTCCTATTCTGTTTTCTGCCTGTTACTTCTGGAGAGTTCCCCACAGAACTTaGAGAACGAAGAAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: DVHALLPPILFSACYFWRVPHRT*RTKKGS
Trigger: GCTCCCCTTCTTCGTTCTCAAAGTTCTGTGGGGAAC...TCTCCAGAAGTAACAGGCAGAAAACAGAATAGGAGGTAATAGAGCATGAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS TCA 90 bp CACACACGTAACCAAATGCCCGGTTGTCTGTCACATCACGGGCAATaGAAGAAATCTTATTTACTGGATGTTCATGCTCTATTACCCCAG +
Preference number: 5 (lower is better)
Translates to: HTRNQMPGCLSHHGQ*KKSYLLDVHALLPQ
Trigger: CTGGGGTAATAGAGCATGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGGTTACGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000512525.5
ENST00000545653.5
CDS TCA 90 bp GCAAGAAGGATGCCTGAGGCGTTGGTCGAGGAAGAGAACAGGAGGTaGTGCCGTTTGTTAAGAATGGATTTTCTCTTAAAGAATTCTGAT +
Preference number: 5 (lower is better)
Translates to: ARRMPEALVEEENRR*CRLLRMDFLLKNSD
Trigger: ATCAGAATTCTTTAAGAGAAAATCCATTCTTAACAAACGGCATCACCTCCTGTTCTCTTCCTCGACCAACGCCTCAGGCATCCTTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS TCA 90 bp CCATTACTCAGCGGAGTAGACGAGCTACTCGAATTCTCTTTCTTCTaGTCTGGAGATTTGAGAGAATCAAACGAAGAAGGTGTCGATTGG +
Preference number: 5 (lower is better)
Translates to: PLLSGVDELLEFSFF*SGDLRESNEEGVDW
Trigger: CCAATCGACACCTTCTTCGTTTGATTCTCTCAAATCTCCAGATCAGAAGAAAGAGAATTCGAGTAGCTCGTCTACTCCGCTGAGTAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 90 bp TCTGATATGATCTATTCGAGTTGGGGAAGACATCCACAACCAACATaGCAGTTAGGCTTCATCTCCAGGAATATTGGTGGCCTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: SDMIYSSWGRHPQPT*QLGFISRNIGGLAN
Trigger: ATTAGCAAGGCCACCAATATTCCTGGAGATGAAGCCTAACTGCCATGTTGGTTGTGGATGTCTTCCCCAACTCGAATAGATCATATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATTTTGGTGCGGCCTGTaGGTCGGGCTGACCATTGGT +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKFWCGL*VGLTIG
Trigger: ACCAATGGTCAGCCCGACCAACAGGCCGCACCAAAA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGCAGGAGCACTTGTTTaGAAGAGATCCAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERAGALV*KRSRGL
Trigger: CAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTGC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGTTGTTGACCAAGCATaGGGTGCCACAGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERVVDQA*GATDAE
Trigger: TTCTGCATCTGTGGCACCCAATGCTTGGTCAACAAC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGTCTGGCTATCAGCTTaGTTTTTGACTACTAAGGCC +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEVWLSA*FLTTKA
Trigger: GGCCTTAGTAGTCAAAAACAAAGCTGATAGCCAGAC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAAGGACAATCTTGGCCTaGGGAGAAATTGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSERTILA*GEIDLQ
Trigger: CTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCCT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAAGAGAGTGGCCTCCTCTTCCACAGGAAGGATATAGGTTGTGCCCATTTGCAAACTAACAGGATATCTTaGCTTTCCGATTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: QESGLLFHRKDIGCAHLQTNRIS*LSDFSL
Trigger: CAAACTGAAATCGGAAAGCAAAGATATCCTGTTAGT...TTGCAAATGGGCACAACCTATATCCTTCCTGTGGAAGAGGAGGCCACTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTCAATGCCAATCAGCTaGGCCTTATATTTTACACCA +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTSMPIS*ALYFTP
Trigger: TGGTGTAAAATATAAGGCCAAGCTGATTGGCATTGA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTTTCATCATAGAGTCTaGGCTCATTTTATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTFHHRV*AHFIPS
Trigger: AGAGGGGATAAAATGAGCCAAGACTCTATGATGAAA...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCCAGAAAGGGAAATGTaGACCCAGATCCTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSPEREM*TQILCL
Trigger: CAAACAAAGGATCTGGGTCAACATTTCCCTTTCTGG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCGAAGAAGGTGTCGATaGGTCTGGCTGTGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTRRRCR*VWLCER
Trigger: CCTTTCACACAGCCAGACCAATCGACACCTTCTTCG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAAGAGATCTGGTCAAATaGCTGACCAAAGTAGTCAAC +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSERDLVK*LTKVVN
Trigger: GTTGACTACTTTGGTCAGCAATTTGACCAGATCTCT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGATGCAAGCAAGTCATaGGCTGAAGACTTAGCAGTC +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERDASKS*AEDLAV
Trigger: GACTGCTAAGTCTTCAGCCAATGACTTGCTTGCATC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCCAAAGGGCTTGTTGTaGACCAAGCATTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTPKGLL*TKHWVP
Trigger: TGGCACCCAATGCTTGGTCAACAACAAGCCCTTTGG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTGGGTTCTCAAATGCATaGTCAGTAGATTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTGFSNA*SVDLVT
Trigger: AGTTACCAAATCTACTGACAATGCATTTGAGAACCC...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTGAGAAAAGGACAATCTaGGCCTTGGGAGAAATTGAT +
Preference number: 5 (lower is better)
Translates to: LQNCAHNRTENELGTFPSEKRTI*ALGEID
Trigger: ATCAATTTCTCCCAAGGCCAAGATTGTCCTTTTCTC...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTCACAGGACTTTCTACTaGGGGCTAATCAATAGAGGG +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERHRTFY*GLINRG
Trigger: CCCTCTATTGATTAGCCCCAAGTAGAAAGTCCTGTG...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS TCA 90 bp GAGAGGACTTTAATATTTAATAGGAGGTGTCCAGGAAGTGGCACATaGTGGTTCTGGTTTCAGTTCTCACTACAAGAAGAAGTGACTTGC +
Preference number: 5 (lower is better)
Translates to: ERTLIFNRRCPGSGT*WFWFQFSLQEEVTC
Trigger: GCAAGTCACTTCTTCTTGTAGTGAGAACTGAAACCAGAACCATCATGTGCCACTTCCTGGACACCTCCTATTAAATATTAAAGTCCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS-3UTR CAA 90 bp CTTCAGAACTGTGCTCACAACAGGACTGAAAATGAACTGGGAACGTTTCCAAGTTTTACACCATCGCCTTaGAACCTTGCTAAGAGATAT +
Preference number: 5 (lower is better)
Translates to: LQNCAHNRTENELGTFPSFTPSP*NLAKRY
Trigger: ATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAA...ACTTGGAAACGTTCCCAGTTCATTTTCAGTCCTGTTGTGAGCACAGTTCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATTTCATCATAGAGTCTaGGCTCATTTTATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEFHHRV*AHFIPS
Trigger: AGAGGGGATAAAATGAGCCAAGACTCTATGATGAAA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAGATCCTTTGTTTGTGTaGTCCCTGAGACCGACCAGC +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKDPLFV*SLRPTS
Trigger: GCTGGTCGGTCTCAGGGACAACACAAACAAAGGATC...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTCCATTCTCAACTGCTTaGCTGGCTTCCTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERPFSTA*LASSIF
Trigger: AAAGATAGAGGAAGCCAGCAAAGCAGTTGAGAATGG...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTGCAGGAGCACTTGTTTaGAAGAGATCCAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTAGALV*KRSRGL
Trigger: CAACCCTCTGGATCTCTTCAAAACAAGTGCTCCTGC...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAGGGTTCTCAAATGCATaGTCAGTAGATTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEGFSNA*SVDLVT
Trigger: AGTTACCAAATCTACTGACAATGCATTTGAGAACCC...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAACTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSELSALF*TTKANL
Trigger: AAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAG...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTAGGACAATCTTGGCCTaGGGAGAAATTGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERRTILA*GEIDLQ
Trigger: CTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCCT...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGAGAAAAGGACAATCTaGGCCTTGGGAGAAATTGAT +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSEKRTI*ALGEID
Trigger: ATCAATTTCTCCCAAGGCCAAGATTGTCCTTTTCTC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CAGGGACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTCTTTCCGATTTCAGTTaGTTAGTTTGGTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: QGHKRQGSVGKLLYFIYTLSDFS*LVWSSR
Trigger: TCTAGATGACCAAACTAACAAACTGAAATCGGAAAG...AGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGTCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509337.5
ENST00000545653.5
CDS TCA 90 bp CATCAATGCCAATCAGCTTGGCCTTATATTTTACACCATCGCCTTTaGACCTTGCTAAGAGATATTCATCTGTCTTTTCAGGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: HQCQSAWPYILHHRL*TLLRDIHLSFQGLS
Trigger: AGAAAGGCCCTGAAAAGACAGATGAATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAAATATAAGGCCAAGCTGATTGGCATTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000545653.5
CDS CCA 90 bp AATGCTGATATAACTAAAGCACAGCTGACCCTTCCCTTTAAAGGATaGATATTTGAGCACCTACTATGTGTAGCCACAGCAACTTCTGAT +
Preference number: 5 (lower is better)
Translates to: NADITKAQLTLPFKG*IFEHLLCVATATSD
Trigger: ATCAGAAGTTGCTGTGGCTACACATAGTAGGTGCTCAAATATCCATCCTTTAAAGGGAAGGGTCAGCTGTGCTTTAGTTATATCAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502388.1
CDS-3UTR CAA 90 bp ACCAAATGCCCGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTTTACACCATCGCCTTaGAACCTTGCTAAGAGATAT +
Preference number: 5 (lower is better)
Translates to: TKCPVVCHITGNERNLIYFTPSP*NLAKRY
Trigger: ATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAA...GTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp ACTTTGAGAACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTGGTCAGATCAATGCCAATCAGCTaGGCCTTATATTTTACACCA +
Preference number: 5 (lower is better)
Translates to: TLRTKKGSRNSSSKLLVRSMPIS*ALYFTP
Trigger: TGGTGTAAAATATAAGGCCAAGCTGATTGGCATTGA...TCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGTTCTCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp CCAAATGCCCGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTTTTCATCATAGAGTCTaGGCTCATTTTATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: PNARLSVTSRAMKEILFTFHHRV*AHFIPS
Trigger: AGAGGGGATAAAATGAGCCAAGACTCTATGATGAAA...AGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCGGGCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp CATGCTCTATTACCTCCTATTCTGTTTTCTGCCTGTTACTTCTGGAGATGTAATCCAGAAAGGGAAATGTaGACCCAGATCCTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: HALLPPILFSACYFWRCNPEREM*TQILCL
Trigger: CAAACAAAGGATCTGGGTCAACATTTCCCTTTCTGG...ATTACATCTCCAGAAGTAACAGGCAGAAAACAGAATAGGAGGTAATAGAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTATCTTTGCTTTCTGTaGGACTATTTAGGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSYLCFL*DYLGQE
Trigger: CTCCTGACCTAAATAGTCCAACAGAAAGCAAAGATA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320816.11
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATGTATGGACAGTCCTTaGGGAGGGCTTCCCACAAAA +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKCMDSP*GGLPTK
Trigger: TTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAATTTCTTTCACATCCTaGATCTCTTTATCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSEISFTS*ISLSPS
Trigger: ACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAAT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAAGGTGGCTGCCGCAGTaGGAAATCCTTAAACATTTC +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLRWLPQ*EILKHF
Trigger: GAAATGTTTAAGGATTTCCAACTGCGGCAGCCACCT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCGGGTTCTCAAATGCATaGTCAGTAGATTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSGFSNA*SVDLVT
Trigger: AGTTACCAAATCTACTGACAATGCATTTGAGAACCC...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCCTATCAGCTTTGTTTTaGACTACTAAGGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSLSALF*TTKANL
Trigger: AAGGTTGGCCTTAGTAGTCAAAAACAAAGCTGATAG...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTGAGAAAAGGACAATCTaGGCCTTGGGAGAAATTGAT +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSEREKRTI*ALGEID
Trigger: ATCAATTTCTCCCAAGGCCAAGATTGTCCTTTTCTC...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAATCCTTTGTTGCTGAGTaGAGTTCAATTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSESFVAE*SSISLE
Trigger: TTCAAGAGAAATTGAACTCAACTCAGCAACAAAGGA...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTTCCTACTAACGACATaGAGATTGTGGCTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERFLLTT*RLWLQE
Trigger: TTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTACACAGGACTTTCTACTaGGGGCTAATCAATAGAGGG +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLHRTFY*GLINRG
Trigger: CCCTCTATTGATTAGCCCCAAGTAGAAAGTCCTGTG...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp CGGTTGTCTGTCACATCACGGGCAATGAAAGAAATCTTATTTACTGGATGTTCAAATTCAAGTAGCAAATaGTTGGTCAGACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RLSVTSRAMKEILFTGCSNSSSK*LVRLRW
Trigger: CCACCTGAGTCTGACCAACAATTTGCTACTTGAATT...TGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACAGACAACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS-3UTR CAA 90 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTGCAGACCAAGTTCAGAAACTAACAGGATATCTTaGCTTTCCGATTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LLRPTFLFLWMVCRPSSETNRIS*LSDFSL
Trigger: CAAACTGAAATCGGAAAGCAAAGATATCCTGTTAGT...TTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCCAGAAAGGGAAATGTaGACCCAGATCCTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTPEREM*TQILCL
Trigger: CAAACAAAGGATCTGGGTCAACATTTCCCTTTCTGG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTCCATTCTCAACTGCTTaGCTGGCTTCCTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTPFSTA*LASSIF
Trigger: AAAGATAGAGGAAGCCAGCAAAGCAGTTGAGAATGG...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCATTTCTTTCACATCCTaGATCTCTTTATCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSISFTS*ISLSPS
Trigger: ACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAAT...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS-3UTR CAA 90 bp ACACAAGAGGCAGGGTTCAGTAGGGAAACTACTGTACTTCATTTACACTTAAGCTCCTTTGTTGCTGAGTaGAGTTCAATTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: TQEAGFSRETTVLHLHLSSFVAE*SSISLE
Trigger: TTCAAGAGAAATTGAACTCAACTCAGCAACAAAGGA...GCTTAAGTGTAAATGAAGTACAGTAGTTTCCCTACTGAACCCTGCCTCTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS GCA 90 bp GATAAATCTAAATCCAGTCAATTACTCTTCAAGGCCCAAATCAAGTaGAGTTTCCTCAGATATTCTCCACCCAACCCTGATTATTACCAT +
Preference number: 5 (lower is better)
Translates to: DKSKSSQLLFKAQIK*SFLRYSPPNPDYYH
Trigger: ATGGTAATAATCAGGGTTGGGTGGAGAATATCTGAGGAAACTGCACTTGATTTGGGCCTTGAAGAGTAATTGACTGGATTTAGATTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAACCAGAAAGGGAAATGTaGACCCAGATCCTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKPEREM*TQILCL
Trigger: CAAACAAAGGATCTGGGTCAACATTTCCCTTTCTGG...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAAGAGATCTGGTCAAATaGCTGACCAAAGTAGTCAAC +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLRDLVK*LTKVVN
Trigger: GTTGACTACTTTGGTCAGCAATTTGACCAGATCTCT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAGGACAATCTTGGCCTaGGGAGAAATTGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKRTILA*GEIDLQ
Trigger: CTGAAGATCAATTTCTCCCAAGGCCAAGATTGTCCT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp AATAAGGCAACAGATAATACGTCAAAGCTGGAACAAGGGCAGAAATCAGAACGTTCCTTTGTTGCTGAGTaGAGTTCAATTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: NKATDNTSKLEQGQKSERSFVAE*SSISLE
Trigger: TTCAAGAGAAATTGAACTCAACTCAGCAACAAAGGA...ACGTTCTGATTTCTGCCCTTGTTCCAGCTTTGACGTATTATCTGTTGCCTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTATTCCTACTAACGACATaGAGATTGTGGCTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLFLLTT*RLWLQE
Trigger: TTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAA...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAACATTGGCTGAAGATGTaGGACTATTTAGGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKHWLKM*DYLGQE
Trigger: CTCCTGACCTAAATAGTCCAACATCTTCAGCCAATG...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339788.10
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTATTTACACCATCGCCTTaGAACCTTGCTAAGAGATAT +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLFTPSP*NLAKRY
Trigger: ATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAA...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTTCAATGCCAATCAGCTaGGCCTTATATTTTACACCA +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTSMPIS*ALYFTP
Trigger: TGGTGTAAAATATAAGGCCAAGCTGATTGGCATTGA...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTTTTCATCATAGAGTCTaGGCTCATTTTATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTFHHRV*AHFIPS
Trigger: AGAGGGGATAAAATGAGCCAAGACTCTATGATGAAA...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TGTTCTACTATAACCTTTAGGTTTTATGCTCTGAAACAGAACCCCCAAACAACTACACCCGATTTCAGTTaGTTAGTTTGGTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: CSTITFRFYALKQNPQTTTPDFS*LVWSSR
Trigger: TCTAGATGACCAAACTAACAAACTGAAATCGGGTGT...AGTTGTTTGGGGGTTCTGTTTCAGAGCATAAAACCTAAAGGTTATAGTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000339788.10
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAACACCCGATTTCAGTTaGTTAGTTTGGTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLTPDFS*LVWSSR
Trigger: TCTAGATGACCAAACTAACAAACTGAAATCGGGTGT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000339788.10
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAAGAGATCTGGTCAAATaGCTGACCAAAGTAGTCAAC +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKRDLVK*LTKVVN
Trigger: GTTGACTACTTTGGTCAGCAATTTGACCAGATCTCT...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320816.11
ENST00000545653.5
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTAAAGCACCTAATGTGTTaGGCACAATCACATTTAGCT +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLKHLMC*AQSHLA
Trigger: AGCTAAATGTGATTGTGCCAAACACATTAGGTGCTT...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp TATCTTCCTACTAACGACATTGAGATTGTGGCTGCAAGAAAAGTTTTCCAGTTACTAACGACATTGAGATaGTGGCTGCAAGAAAAGTTT +
Preference number: 5 (lower is better)
Translates to: YLPTNDIEIVAARKVFQLLTTLR*WLQEKF
Trigger: AAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAG...TAACTGGAAAACTTTTCTTGCAGCCACAATCTCAATGTCGTTAGTAGGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS TCA 90 bp AAATTTCACTCTTTATTCCATGTCACCCTTTCTCACAAAAACCCCTaGGACAGGCTTATTAGGATCTTCTACTTACAGAATTTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: KFHSLFHVTLSHKNP*DRLIRIFYLQNLGK
Trigger: TTTGCCTAAATTCTGTAAGTAGAAGATCCTAATAAGCCTGTCTCAGGGGTTTTTGTGAGAAAGGGTGACATGGAATAAAGAGTGAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502879.1
CDS CCA 90 bp AAATCCTATGAGAATGGGCAGCTTTCTAACAAGGACAAGCTTTGGTaGAATATAACTGAGCCACTTGTTTGTTTTAAATCTTACTTCACA +
Preference number: 5 (lower is better)
Translates to: KSYENGQLSNKDKLW*NITEPLVCFKSYFT
Trigger: TGTGAAGTAAGATTTAAAACAAACAAGTGGCTCAGTTATATTCCACCAAAGCTTGTCCTTGTTAGAAAGCTGCCCATTCTCATAGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505968.1
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAATTTCATCATAGAGTCTaGGCTCATTTTATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKFHHRV*AHFIPS
Trigger: AGAGGGGATAAAATGAGCCAAGACTCTATGATGAAA...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS-3UTR CAA 90 bp ACTTATTTTGACAATAATAAACCCTTCAGAACTGTGCTCACAACAGGACTGAAAGGGTTCTCAAATGCATaGTCAGTAGATTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: TYFDNNKPFRTVLTTGLKGFSNA*SVDLVT
Trigger: AGTTACCAAATCTACTGACAATGCATTTGAGAACCC...TTTCAGTCCTGTTGTGAGCACAGTTCTGAAGGGTTTATTATTGTCAAAATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000545653.5
CDS GCA 72 bp CCCGCGCCCGGAGCCTCCAGGCTACAGCGCAGCGGATaGGGCGGGCCTCGCTTAAATAGCCGCCGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: PAPGASRLQRSG*GGPRLNSRRPG
Trigger: TCCCGGCCGGCGGCTATTTAAGCGAGGCCCGCCGCATCCGCTGCGCTGTAGCCTGGAGGCTCCGGGCGCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000502388.1
ENST00000507539.5
ENST00000515700.5
ENST00000545653.5
CDS GCA 72 bp GGAGCACTTGTTTTGAAGAGATCCAGAGGGTTGGGCTaGAGGGCTGTAGGTTGTCCTGTGGGTGACGCCTGG +
Preference number: 6 (lower is better)
Translates to: GALVLKRSRGLG*RAVGCPVGDAW
Trigger: CCAGGCGTCACCCACAGGACAACCTACAGCCCTGCAGCCCAACCCTCTGGATCTCTTCAAAACAAGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp CATGGCAAGAAGGCAGGCAGCAAACCTCAGTACCAGTaGACACTTGGTGACACCAGGCGATCCCGATGGAGA +
Preference number: 6 (lower is better)
Translates to: HGKKAGSKPQYQ*TLGDTRRSRWR
Trigger: TCTCCATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACTGAGGTTTGCTGCCTGCCTTCTTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000513052.1
ENST00000515700.5
ENST00000545653.5
CDS CCA 72 bp CCACTCCCGGCGAGAGATATGGTTCTAATCAGATGCTaGCAGCTGAGGACTCCCCAGGAATGTGCCAGGATG +
Preference number: 6 (lower is better)
Translates to: PLPARDMVLIRC*QLRTPQECARM
Trigger: CATCCTGGCACATTCCTGGGGAGTCCTCAGCTGCCAGCATCTGATTAGAACCATATCTCTCGCCGGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS CAA 72 bp AGAAGGCAGGCAGCAAACCTCAGTACCAGTGGACACTaGGTGACACCAGGCGATCCCGATGGAGAAGTCTCA +
Preference number: 6 (lower is better)
Translates to: RRQAANLSTSGH*VTPGDPDGEVS
Trigger: TGAGACTTCTCCATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACTGAGGTTTGCTGCCTGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000513052.1
ENST00000515700.5
ENST00000545653.5
CDS CAA 72 bp CCCAGGAATGTGCCAGGATGTTTTTGCTGCCTGGGCTaGGTAACTCCCCCTCAACGTGTCTGCAGAGTCTTC +
Preference number: 6 (lower is better)
Translates to: PRNVPGCFCCLG*VTPPQRVCRVF
Trigger: GAAGACTCTGCAGACACGTTGAGGGGGAGTTACCAAGCCCAGGCAGCAAAAACATCCTGGCACATTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545653.5
CDS TCA 72 bp CCATCATGGCTCCCGGAGCCATTGAAGGGGACTGATTaGAGACCAAAGATGCTGTGTTCCATGGTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: PSWLPEPLKGTD*RPKMLCSMVLP
Trigger: AGGCAGGACCATGGAACACAGCATCTTTGGTCTTCAATCAGTCCCCTTCAATGGCTCCGGGAGCCATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp CCACCCATCATGGCTCCCGGAGCCATTGAAGGGGACTaGTTGAAGACCAAAGATGCTGTGTTCCATGGTCCT +
Preference number: 6 (lower is better)
Translates to: PPIMAPGAIEGD*LKTKDAVFHGP
Trigger: AGGACCATGGAACACAGCATCTTTGGTCTTCAATCAGTCCCCTTCAATGGCTCCGGGAGCCATGATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp AAGGATTCCCCAAAGGGCTTGTTGTTGACCAAGCATTaGGTGCCACAGATGCAGAAGGGCCCCAGACAACAG +
Preference number: 6 (lower is better)
Translates to: KDSPKGLLLTKH*VPQMQKGPRQQ
Trigger: CTGTTGTCTGGGGCCCTTCTGCATCTGTGGCACCCAATGCTTGGTCAACAACAAGCCCTTTGGGGAATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp TGGGAGGGCTTCCCACAAAAGGGTTCGGGGAGGATTTaGCAGAGAAGCCGTTCTGTTCTCTTTCAGATACCC +
Preference number: 6 (lower is better)
Translates to: WEGFPQKGSGRI*QRSRSVLFQIP
Trigger: GGGTATCTGAAAGAGAACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACCCTTTTGTGGGAAGCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp TTGAAGACCAAAGATGCTGTGTTCCATGGTCCTGCCTaGGGGAGTGTGACAGTTACACCACCTAGACCCACC +
Preference number: 6 (lower is better)
Translates to: LKTKDAVFHGPA*GSVTVTPPRPT
Trigger: GGTGGGTCTAGGTGGTGTAACTGTCACACTCCCTCAGGCAGGACCATGGAACACAGCATCTTTGGTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp AGTCCTGCTTTACGCCATTCTGTATGGACAGTCCTTTaGGAGGGCTTCCCACAAAAGGGTTCGGGGAGGATT +
Preference number: 6 (lower is better)
Translates to: SPALRHSVWTVL*EGFPQKGSGRI
Trigger: AATCCTCCCCGAACCCTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAAAGCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp AGGGGACTGATTGAAGACCAAAGATGCTGTGTTCCATaGTCCTGCCTGAGGGAGTGTGACAGTTACACCACC +
Preference number: 6 (lower is better)
Translates to: RGLIEDQRCCVP*SCLRECDSYTT
Trigger: GGTGGTGTAACTGTCACACTCCCTCAGGCAGGACCATGGAACACAGCATCTTTGGTCTTCAATCAGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CAA 72 bp AAGTCCTGCTTTACGCCATTCTGTATGGACAGTCCTTaGGGAGGGCTTCCCACAAAAGGGTTCGGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: KSCFTPFCMDSP*GGLPTKGFGED
Trigger: ATCCTCCCCGAACCCTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAAAGCAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CAA 90 bp GAGCTTTCCAAGTCCTGCTTTACGCCATTCTGTATGGACAGTCCTTaGGGAGGGCTTCCCACAAAAGGGTTCGGGGAGGATTTGACAGAG +
Preference number: 6 (lower is better)
Translates to: ELSKSCFTPFCMDSP*GGLPTKGFGEDLTE
Trigger: CTCTGTCAAATCCTCCCCGAACCCTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAAAGCAGGACTTGGAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CAA 90 bp GACATGGCAAGAAGGCAGGCAGCAAACCTCAGTACCAGTGGACACTaGGTGACACCAGGCGATCCCGATGGAGAAGTCTCAAATAAACAT +
Preference number: 6 (lower is better)
Translates to: DMARRQAANLSTSGH*VTPGDPDGEVSNKH
Trigger: ATGTTTATTTGAGACTTCTCCATCGGGATCGCCTGGTGTCACCAAGTGTCCACTGGTACTGAGGTTTGCTGCCTGCCTTCTTGCCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000511792.5
ENST00000513052.1
ENST00000515700.5
ENST00000545653.5
CDS CAA 90 bp AGGTTTGCAGAGAACCAGCAGCCTGACAACCAGCCATCTCTCCTCTaGATACCAGTGTTCAAGCAGGCTGAAGGTCAGAATCTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: RFAENQQPDNQPSLL*IPVFKQAEGQNLGS
Trigger: ACTGCCAAGATTCTGACCTTCAGCCTGCTTGAACACTGGTATCAAGAGGAGAGATGGCTGGTTGTCAGGCTGCTGGTTCTCTGCAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS TCA 72 bp TTTGAGGGTGCTTTTGGTGCGGCCTGTTGGTCGGGCTaGCCATTGGTTGCACTTGTTTCTACTTCGTTAGAC +
Preference number: 6 (lower is better)
Translates to: FEGAFGAACWSG*PLVALVSTSLD
Trigger: GTCTAACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCCGACCAACAGGCCGCACCAAAAGCACCCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000515700.5
ENST00000545653.5
CDS TCA 72 bp TTGGCAGAAAAGGCATTTTCAGGCAAGAAGGATGCCTaGGGCGTTGGTCGAGGAAGAGAACAGGAGGTGATG +
Preference number: 6 (lower is better)
Translates to: LAEKAFSGKKDA*GVGRGREQEVM
Trigger: CATCACCTCCTGTTCTCTTCCTCGACCAACGCCTCAGGCATCCTTCTTGCCTGAAAATGCCTTTTCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp TGGACTTGTACCAAAAATGACGGGCTGACTAAAACCTaGAGGTTGACCACCCATCATGGCTCCCGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: WTCTKNDGLTKT*RLTTHHGSRSH
Trigger: ATGGCTCCGGGAGCCATGATGGGTGGTCAACCTTCAGGTTTTAGTCAGCCCGTCATTTTTGGTACAAGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp AGAACCAGCAGCCTGACAACCAGCCATCTCTCCTCTTaGTACCAGTGTTCAAGCAGGCTGAAGGTCAGAATC +
Preference number: 6 (lower is better)
Translates to: RTSSLTTSHLSS*YQCSSRLKVRI
Trigger: GATTCTGACCTTCAGCCTGCTTGAACACTGGTATCAAGAGGAGAGATGGCTGGTTGTCAGGCTGCTGGTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS TCA 72 bp CCCACAGACACCCATAGAGTTGGCATTAACCTTCCATaGGAGACTTGCCGCTGGGTCACATTTCCACATCTG +
Preference number: 6 (lower is better)
Translates to: PTDTHRVGINLP*ETCRWVTFPHL
Trigger: CAGATGTGGAAATGTGACCCAGCGGCAAGTCTCTCATGGAAGGTTAATGCCAACTCTATGGGTGTCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS GCA 72 bp GAGATTGGCAGAAAAGGCATTTTCAGGCAAGAAGGATaGCTGAGGCGTTGGTCGAGGAAGAGAACAGGAGGT +
Preference number: 6 (lower is better)
Translates to: EIGRKGIFRQEG*LRRWSRKRTGG
Trigger: ACCTCCTGTTCTCTTCCTCGACCAACGCCTCAGGCATCCTTCTTGCCTGAAAATGCCTTTTCTGCCAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp CAGAGCTTTCCAAGTCCTGCTTTACGCCATTCTGTATaGACAGTCCTTTGGGAGGGCTTCCCACAAAAGGGT +
Preference number: 6 (lower is better)
Translates to: QSFPSPALRHSV*TVLWEGFPQKG
Trigger: ACCCTTTTGTGGGAAGCCCTCCCAAAGGACTGTCCATACAGAATGGCGTAAAGCAGGACTTGGAAAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp TCCATCCTCCCTTGGTACTTCCTGCTCGAGACACTTTaGCAGTCAATCACATGCTGCCCTGAACATTGCCAT +
Preference number: 6 (lower is better)
Translates to: SILPWYFLLETL*QSITCCPEHCH
Trigger: ATGGCAATGTTCAGGGCAGCATGTGATTGACTGCCAAAGTGTCTCGAGCAGGAAGTACCAAGGGAGGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS CAA 72 bp TTGGGAGGGCTTCCCACAAAAGGGTTCGGGGAGGATTaGACAGAGAAGCCGTTCTGTTCTCTTTCAGATACC +
Preference number: 6 (lower is better)
Translates to: LGGLPTKGFGED*TEKPFCSLSDT
Trigger: GGTATCTGAAAGAGAACAGAACGGCTTCTCTGTCAAATCCTCCCCGAACCCTTTTGTGGGAAGCCCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CAA 72 bp GAGAACCAGCAGCCTGACAACCAGCCATCTCTCCTCTaGATACCAGTGTTCAAGCAGGCTGAAGGTCAGAAT +
Preference number: 6 (lower is better)
Translates to: ENQQPDNQPSLL*IPVFKQAEGQN
Trigger: ATTCTGACCTTCAGCCTGCTTGAACACTGGTATCAAGAGGAGAGATGGCTGGTTGTCAGGCTGCTGGTTCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS TCA 72 bp GAAATGTTGACCCAGATCCTTTGTTTGTGTTGTCCCTaGGACCGACCAGCTGCCGCCATTCCCTTTAGTTTC +
Preference number: 6 (lower is better)
Translates to: EMLTQILCLCCP*DRPAAAIPFSF
Trigger: GAAACTAAAGGGAATGGCGGCAGCTGGTCGGTCTCAGGGACAACACAAACAAAGGATCTGGGTCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000507539.5
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp TTGTGGAGGTGGGATAATGGCTATGGAGTCATGTGGTaGGGACTGGACAGAGCTTTCCAAGTCCTGCTTTAC +
Preference number: 6 (lower is better)
Translates to: LWRWDNGYGVMW*GLDRAFQVLLY
Trigger: GTAAAGCAGGACTTGGAAAGCTCTGTCCAGTCCTCACCACATGACTCCATAGCCATTATCCCACCTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS GCA 72 bp TTTTGGTGCGGCCTGTTGGTCGGGCTGACCATTGGTTaGACTTGTTTCTACTTCGTTAGACATGGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: FWCGLLVGLTIG*TCFYFVRHGKK
Trigger: CTTCTTGCCATGTCTAACGAAGTAGAAACAAGTGCAACCAATGGTCAGCCCGACCAACAGGCCGCACCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000515700.5
ENST00000545653.5
CDS CAA 72 bp TATTGCTCTGAAAAGGATTCCCCAAAGGGCTTGTTGTaGACCAAGCATTGGGTGCCACAGATGCAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: YCSEKDSPKGLL*TKHWVPQMQKG
Trigger: GCCCTTCTGCATCTGTGGCACCCAATGCTTGGTCAACAACAAGCCCTTTGGGGAATCCTTTTCAGAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CAA 72 bp CCACCCAACCCTGATTATTACCATCTCCATCCTCCCTaGGTACTTCCTGCTCGAGACACTTTGGCAGTCAAT +
Preference number: 6 (lower is better)
Translates to: PPNPDYYHLHPP*VLPARDTLAVN
Trigger: ATTGACTGCCAAAGTGTCTCGAGCAGGAAGTACCAAGGGAGGATGGAGATGGTAATAATCAGGGTTGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS CAA 90 bp TGCCTGAGCTTCCTGTTTGCCAGTCCGGTTAGAGATCTGGTCAAATaGCTGACCAAAGTAGTCAACATCACCATTCAGGGGCCCATTACT +
Preference number: 6 (lower is better)
Translates to: CLSFLFASPVRDLVK*LTKVVNITIQGPIT
Trigger: AGTAATGGGCCCCTGAATGGTGATGTTGACTACTTTGGTCAGCAATTTGACCAGATCTCTAACCGGACTGGCAAACAGGAAGCTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp AGGGTTCTCAAATGCATTGTCAGTAGATTTGGTAACTaGCAGGGAAACTTGTCTGGGAGCTGGCTTTGGTGG +
Preference number: 6 (lower is better)
Translates to: RVLKCIVSRFGN*QGNLSGSWLWW
Trigger: CCACCAAAGCCAGCTCCCAGACAAGTTTCCCTGCCAGTTACCAAATCTACTGACAATGCATTTGAGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CAA 90 bp AGATATTCTCCACCCAACCCTGATTATTACCATCTCCATCCTCCCTaGGTACTTCCTGCTCGAGACACTTTGGCAGTCAATCACATGCTG +
Preference number: 6 (lower is better)
Translates to: RYSPPNPDYYHLHPP*VLPARDTLAVNHML
Trigger: CAGCATGTGATTGACTGCCAAAGTGTCTCGAGCAGGAAGTACCAAGGGAGGATGGAGATGGTAATAATCAGGGTTGGGTGGAGAATATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS CAA 90 bp GGTGGCTGCCGCAGTTGGAAATCCTTAAACATTTCTTTCACATCCTaGATCTCTTTATCCCCAAGTGGGTCTAAGGCAGTGAAGGCATCA +
Preference number: 6 (lower is better)
Translates to: GGCRSWKSLNISFTS*ISLSPSGSKAVKAS
Trigger: TGATGCCTTCACTGCCTTAGACCCACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAATGTTTAAGGATTTCCAACTGCGGCAGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp GAGAAGCCGTTCTGTTCTCTTTCAGATACCCCATTTTaGGTTCTCACTGCTGGCTGGGTTTGCGAACTTGAA +
Preference number: 6 (lower is better)
Translates to: EKPFCSLSDTPF*VLTAGWVCELE
Trigger: TTCAAGTTCGCAAACCCAGCCAGCAGTGAGAACTCAAAATGGGGTATCTGAAAGAGAACAGAACGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp CAAGTGCAGTTTCCTCAGATATTCTCCACCCAACCCTaGTTATTACCATCTCCATCCTCCCTTGGTACTTCC +
Preference number: 6 (lower is better)
Translates to: QVQFPQIFSTQP*LLPSPSSLGTS
Trigger: GGAAGTACCAAGGGAGGATGGAGATGGTAATAATCAGGGTTGGGTGGAGAATATCTGAGGAAACTGCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS TCA 72 bp GATGGTTCTGGTTTCAGTTCTCACTACAAGAAGAAGTaGCTTGCTTGCCACAGCAGACAGAAGACCGCTGTT +
Preference number: 6 (lower is better)
Translates to: DGSGFSSHYKKK*LACHSRQKTAV
Trigger: AACAGCGGTCTTCTGTCTGCTGTGGCAAGCAAGTCACTTCTTCTTGTAGTGAGAACTGAAACCAGAACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS TCA 72 bp GAGACTTGCCGCTGGGTCACATTTCCACATCTGATATaGTCTATTCGAGTTGGGGAAGACATCCACAACCAA +
Preference number: 6 (lower is better)
Translates to: ETCRWVTFPHLI*SIRVGEDIHNQ
Trigger: TTGGTTGTGGATGTCTTCCCCAACTCGAATAGATCATATCAGATGTGGAAATGTGACCCAGCGGCAAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS TCA 72 bp CATGAGAGACTTGCCGCTGGGTCACATTTCCACATCTaGTATGATCTATTCGAGTTGGGGAAGACATCCACA +
Preference number: 6 (lower is better)
Translates to: HERLAAGSHFHI*YDLFELGKTST
Trigger: TGTGGATGTCTTCCCCAACTCGAATAGATCATATCAGATGTGGAAATGTGACCCAGCGGCAAGTCTCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS GCA 72 bp TTCTGGTTTCAGTTCTCACTACAAGAAGAAGTGACTTaGTTGCCACAGCAGACAGAAGACCGCTGTTCTCTC +
Preference number: 6 (lower is better)
Translates to: FWFQFSLQEEVT*LPQQTEDRCSL
Trigger: GAGAGAACAGCGGTCTTCTGTCTGCTGTGGCAAGCAAGTCACTTCTTCTTGTAGTGAGAACTGAAACCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS CCA 72 bp TTTGAGAGAATCAAACGAAGAAGGTGTCGATTGGTCTaGCTGTGTGAAAGGATCGTCACGGAAAGGATCAGG +
Preference number: 6 (lower is better)
Translates to: FERIKRRRCRLV*LCERIVTERIR
Trigger: CCTGATCCTTTCCGTGACGATCCTTTCACACAGCCAGACCAATCGACACCTTCTTCGTTTGATTCTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp GGAGATTTGAGAGAATCAAACGAAGAAGGTGTCGATTaGTCTGGCTGTGTGAAAGGATCGTCACGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: GDLRESNEEGVD*SGCVKGSSRKG
Trigger: TCCTTTCCGTGACGATCCTTTCACACAGCCAGACCAATCGACACCTTCTTCGTTTGATTCTCTCAAATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CCA 72 bp CGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTTaGTCAGACTCAGGTGGTCAGAGAGGTATCAGCAAA +
Preference number: 6 (lower is better)
Translates to: RRRGAEIQVANC*SDSGGQRGISK
Trigger: TTTGCTGATACCTCTCTGACCACCTGAGTCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS CCA 72 bp ATCTATTCGAGTTGGGGAAGACATCCACAACCAACATaGCAGTTAGGCTTCATCTCCAGGAATATTGGTGGC +
Preference number: 6 (lower is better)
Translates to: IYSSWGRHPQPT*QLGFISRNIGG
Trigger: GCCACCAATATTCCTGGAGATGAAGCCTAACTGCCATGTTGGTTGTGGATGTCTTCCCCAACTCGAATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513052.1
CDS CAA 72 bp TGGAGATTTGAGAGAATCAAACGAAGAAGGTGTCGATaGGTCTGGCTGTGTGAAAGGATCGTCACGGAAAGG +
Preference number: 6 (lower is better)
Translates to: WRFERIKRRRCR*VWLCERIVTER
Trigger: CCTTTCCGTGACGATCCTTTCACACAGCCAGACCAATCGACACCTTCTTCGTTTGATTCTCTCAAATCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CAA 72 bp TTCCTGTTTGCCAGTCCGGTTAGAGATCTGGTCAAATaGCTGACCAAAGTAGTCAACATCACCATTCAGGGG +
Preference number: 6 (lower is better)
Translates to: FLFASPVRDLVK*LTKVVNITIQG
Trigger: CCCCTGAATGGTGATGTTGACTACTTTGGTCAGCAATTTGACCAGATCTCTAACCGGACTGGCAAACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CAA 72 bp ACGAAGAAGGGGAGCCGAAATTCAAGTAGCAAATTGTaGGTCAGACTCAGGTGGTCAGAGAGGTATCAGCAA +
Preference number: 6 (lower is better)
Translates to: TKKGSRNSSSKL*VRLRWSERYQQ
Trigger: TTGCTGATACCTCTCTGACCACCTGAGTCTGACCAACAATTTGCTACTTGAATTTCGGCTCCCCTTCTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507539.5
CDS CAA 72 bp TGGTTTCAGTTCTCACTACAAGAAGAAGTGACTTGCTaGCCACAGCAGACAGAAGACCGCTGTTCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: WFQFSLQEEVTC*PQQTEDRCSLR
Trigger: TCTGAGAGAACAGCGGTCTTCTGTCTGCTGTGGCAAGCAAGTCACTTCTTCTTGTAGTGAGAACTGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS CAA 72 bp CATAACCTCCCACAGACACCTAATGTAGGTGATGGGTaGATGGATGCAGCAAACCACCATGGCACATGTATA +
Preference number: 6 (lower is better)
Translates to: HNLPQTPNVGDG*MDAANHHGTCI
Trigger: TATACATGTGCCATGGTGGTTTGCTGCATCCATCAACCCATCACCTACATTAGGTGTCTGTGGGAGGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515700.5
CDS CAA 90 bp CTTCTGATCTGGAGATTTGAGAGAATCAAACGAAGAAGGTGTCGATaGGTCTGGCTGTGTGAAAGGATCGTCACGGAAAGGATCAGGATT +
Preference number: 6 (lower is better)
Translates to: LLIWRFERIKRRRCR*VWLCERIVTERIRI
Trigger: AATCCTGATCCTTTCCGTGACGATCCTTTCACACAGCCAGACCAATCGACACCTTCTTCGTTTGATTCTCTCAAATCTCCAGATCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320816.11
ENST00000509337.5
ENST00000545653.5
CDS CAA 72 bp AAATATTGCTCTGAAAAGGATTCCCCAAAGGGCTTGTaGTTGACCAAGCATTGGGTGCCACAGATGCAGAAG +
Preference number: 6 (lower is better)
Translates to: KYCSEKDSPKGL*LTKHWVPQMQK
Trigger: CTTCTGCATCTGTGGCACCCAATGCTTGGTCAACAACAAGCCCTTTGGGGAATCCTTTTCAGAGCAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CAA 72 bp CTCAGAGGAAACGCAGCTCCAAGCTTGTTGTTCTTGTaGCTTCTGCTGGGAACGACCTTTCTAGATAAATCT +
Preference number: 6 (lower is better)
Translates to: LRGNAAPSLLFL*LLLGTTFLDKS
Trigger: AGATTTATCTAGAAAGGTCGTTCCCAGCAGAAGCAACAAGAACAACAAGCTTGGAGCTGCGTTTCCTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS CAA 72 bp TCTCTCAGAGGAAACGCAGCTCCAAGCTTGTTGTTCTaGTTGCTTCTGCTGGGAACGACCTTTCTAGATAAA +
Preference number: 6 (lower is better)
Translates to: SLRGNAAPSLLF*LLLLGTTFLDK
Trigger: TTTATCTAGAAAGGTCGTTCCCAGCAGAAGCAACAAGAACAACAAGCTTGGAGCTGCGTTTCCTCTGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS CAA 72 bp AACCTCCCACAGACACCTCCAAGCTTGTTGTTCTTGTaGCTTCTGCTGGGAACGACCTTTCTAGATAAATCT +
Preference number: 6 (lower is better)
Translates to: NLPQTPPSLLFL*LLLGTTFLDKS
Trigger: AGATTTATCTAGAAAGGTCGTTCCCAGCAGAAGCAACAAGAACAACAAGCTTGGAGGTGTCTGTGGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511792.5
CDS CAA 72 bp CATAACCTCCCACAGACACCTCCAAGCTTGTTGTTCTaGTTGCTTCTGCTGGGAACGACCTTTCTAGATAAA +
Preference number: 6 (lower is better)
Translates to: HNLPQTPPSLLF*LLLLGTTFLDK
Trigger: TTTATCTAGAAAGGTCGTTCCCAGCAGAAGCAACAAGAACAACAAGCTTGGAGGTGTCTGTGGGAGGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511792.5
CDS TCA 72 bp AAATTGTCCAAGAGCATGCAGTTGGTAGGTTGCAACTaGTGTTCATATCTAAGAACCTGTGCCCCTAACCAC +
Preference number: 6 (lower is better)
Translates to: KLSKSMQLVGCN*CSYLRTCAPNH
Trigger: GTGGTTAGGGGCACAGGTTCTTAGATATGAACATCAGTTGCAACCTACCAACTGCATGCTCTTGGACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS GCA 72 bp TTTCATCATAGAGTCTTGGCTCATTTTATCCCCTCTTaGATCTGGCACATCATCAATGCCAATCAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: FHHRVLAHFIPS*IWHIINANQLG
Trigger: GCCAAGCTGATTGGCATTGATGATGTGCCAGATGCAAGAGGGGATAAAATGAGCCAAGACTCTATGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000545653.5
CDS CAA 72 bp CCTCTTGCATCTGGCACATCATCAATGCCAATCAGCTaGGCCTTATATTTTACACCATCGCCTTTGAACCTT +
Preference number: 6 (lower is better)
Translates to: PLASGTSSMPIS*ALYFTPSPLNL
Trigger: AAGGTTCAAAGGCGATGGTGTAAAATATAAGGCCAAGCTGATTGGCATTGATGATGTGCCAGATGCAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000545653.5
CDS CAA 72 bp TTAAAGAAAGGGTTCTCAAATGCATTGTCAGTAGATTaGGTAACTGGCAGGGAAACTTGTCTGGGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: LKKGFSNALSVD*VTGRETCLGAG
Trigger: GCCAGCTCCCAGACAAGTTTCCCTGCCAGTTACCAAATCTACTGACAATGCATTTGAGAACCCTTTCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS TCA 72 bp CCAAATGGATCCCTATACATCTCAGAAGATACAGGTTaGGAAGAAGCCACAGAGGCTTGTGATGAACCAAAA +
Preference number: 6 (lower is better)
Translates to: PNGSLYISEDTG*EEATEACDEPK
Trigger: TTTTGGTTCATCACAAGCCTCTGTGGCTTCTTCTCAACCTGTATCTTCTGAGATGTATAGGGATCCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000502879.1
ENST00000509337.5
ENST00000545653.5
CDS GCA 72 bp AAATCCAGTCAATTACTCTTCAAGGCCCAAATCAAGTaGAGTTTCCTCAGATATTCTCCACCCAACCCTGAT +
Preference number: 6 (lower is better)
Translates to: KSSQLLFKAQIK*SFLRYSPPNPD
Trigger: ATCAGGGTTGGGTGGAGAATATCTGAGGAAACTGCACTTGATTTGGGCCTTGAAGAGTAATTGACTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507990.1
ENST00000511792.5
CDS CCA 72 bp GCCCTAGTAGATTCACATTTCGTCCCAAAGCCAAACTaGTATAGCATTCTTCATATGATTATGTCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: ALVDSHFVPKPN*YSILHMIMSAL
Trigger: GAGGGCTGACATAATCATATGAAGAATGCTATACCAGTTTGGCTTTGGGACGAAATGTGAATCTACTAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502388.1
ENST00000509457.1
ENST00000511536.5
ENST00000515269.5
ENST00000515700.5
CDS CAA 72 bp CGCAGTTGGAAATCCTTAAACATTTCTTTCACATCCTaGATCTCTTTATCCCCAAGTGGGTCTAAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RSWKSLNISFTS*ISLSPSGSKAV
Trigger: CACTGCCTTAGACCCACTTGGGGATAAAGAGATCAAGGATGTGAAAGAAATGTTTAAGGATTTCCAACTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CAA 90 bp AAAGAATCTTTAAAGAAAGGGTTCTCAAATGCATTGTCAGTAGATTaGGTAACTGGCAGGGAAACTTGTCTGGGAGCTGGCTTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: KESLKKGFSNALSVD*VTGRETCLGAGFGG
Trigger: ACCACCAAAGCCAGCTCCCAGACAAGTTTCCCTGCCAGTTACCAAATCTACTGACAATGCATTTGAGAACCCTTTCTTTAAAGATTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS GCA 72 bp CTACTAAGGCCAACCTTTTTATTCCTCTGGATGGTCTaGAGACCAAGTTCAGAATTTAGGCAAAAGGATTTC +
Preference number: 6 (lower is better)
Translates to: LLRPTFLFLWMV*RPSSEFRQKDF
Trigger: GAAATCCTTTTGCCTAAATTCTGAACTTGGTCTGCAGACCATCCAGAGGAATAAAAAGGTTGGCCTTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000545653.5
CDS CAA 90 bp TCATCAATGCCAATCAGCTTGGCCTTATATTTTACACCATCGCCTTaGAACCTTGCTAAGAGATATTCATCTGTCTTTTCAGGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SSMPISLALYFTPSP*NLAKRYSSVFSGPF
Trigger: GAAAGGCCCTGAAAAGACAGATGAATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAAATATAAGGCCAAGCTGATTGGCATTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000545653.5
CDS CAA 72 bp GTTTATTTCTGTTGCACTCCAAGCTTGTTGTTCTTGTaGCTTCTGCTGGGAACGACCTTTCTAGATAAATCT +
Preference number: 6 (lower is better)
Translates to: VYFCCTPSLLFL*LLLGTTFLDKS
Trigger: AGATTTATCTAGAAAGGTCGTTCCCAGCAGAAGCAACAAGAACAACAAGCTTGGAGTGCAACAGAAATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509457.1
CDS TCA 72 bp CAATCAGCTTGGCCTTATATTTTACACCATCGCCTTTaGACCTTGCTAAGAGATATTCATCTGTCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: QSAWPYILHHRL*TLLRDIHLSFQ
Trigger: CTGAAAAGACAGATGAATATCTCTTAGCAAGGTTCAAAGGCGATGGTGTAAAATATAAGGCCAAGCTGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000503513.5
ENST00000507539.5
ENST00000509337.5
ENST00000511792.5
ENST00000545653.5
CDS TCA 72 bp TTAATATTTAATAGGAGGTGTCCAGGAAGTGGCACATaGTGGTTCTGGTTTCAGTTCTCACTACAAGAAGAA +
Preference number: 6 (lower is better)
Translates to: LIFNRRCPGSGT*WFWFQFSLQEE
Trigger: TTCTTCTTGTAGTGAGAACTGAAACCAGAACCATCATGTGCCACTTCCTGGACACCTCCTATTAAATATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507990.1
CDS TCA 72 bp TCTTTATTCCATGTCACCCTTTCTCACAAAAACCCCTaGGACAGGCTTATTAGGATCTTCTACTTACAGAAT +
Preference number: 6 (lower is better)
Translates to: SLFHVTLSHKNP*DRLIRIFYLQN
Trigger: ATTCTGTAAGTAGAAGATCCTAATAAGCCTGTCTCAGGGGTTTTTGTGAGAAAGGGTGACATGGAATAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502879.1
CDS CCA 72 bp TGTCACATCACGGGCAATGAAAGAAATCTTATTTACTaGATGTTCATGCTCTATTACCCCAGTTTTCTCATC +
Preference number: 6 (lower is better)
Translates to: CHITGNERNLIY*MFMLYYPSFLI
Trigger: GATGAGAAAACTGGGGTAATAGAGCATGAACATCCAGTAAATAAGATTTCTTTCATTGCCCGTGATGTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320816.11
ENST00000339788.10
ENST00000509337.5
ENST00000512525.5
ENST00000545653.5
CDS CCA 72 bp GAGAATGGGCAGCTTTCTAACAAGGACAAGCTTTGGTaGAATATAACTGAGCCACTTGTTTGTTTTAAATCT +
Preference number: 6 (lower is better)
Translates to: ENGQLSNKDKLW*NITEPLVCFKS
Trigger: AGATTTAAAACAAACAAGTGGCTCAGTTATATTCCACCAAAGCTTGTCCTTGTTAGAAAGCTGCCCATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505968.1
CDS TCA 72 bp GGAATTCTATTCTTAAGTGCCCAGCCTAGTCATTATTaGATGATCTCAGTAGAGATTTTCCTGTCGATTACT +
Preference number: 6 (lower is better)
Translates to: GILFLSAQPSHY*MISVEIFLSIT
Trigger: AGTAATCGACAGGAAAATCTCTACTGAGATCATTCAATAATGACTAGGCTGGGCACTTAAGAATAGAATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502879.1
CDS CAA 90 bp TTGTTTGTTTTAAATCTTACTTCACACCAAATTTATGCTGCTAAATaGCAACAGACAGAATGCAAAAGAAATGAAGAGGCCAGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: LFVLNLTSHQIYAAK*QQTECKRNEEARRL
Trigger: AAGCCTCCTGGCCTCTTCATTTCTTTTGCATTCTGTCTGTTGCAATTTAGCAGCATAAATTTGGTGTGAAGTAAGATTTAAAACAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505968.1