RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173406

Ensembl transcript IDs: ENST00000332102.10, ENST00000371230.1, ENST00000371231.5, ENST00000371232.8, ENST00000371236.7, ENST00000414851.6, ENST00000420954.6, ENST00000473821.1, ENST00000477280.1, ENST00000485760.5, ENST00000489267.1

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGTGCAGACTCCCCATGGTCTTTTGGTATTGGCACCTCAGCTCTTaGTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTC +
Preference number: 1 (lower is better)
Translates to: PCRLPMVFWYWHLSS*LEISLYSWDRIRCF
Trigger: GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 90 bp TGGTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTaGGACAGGATACGGTGCTTCCAGGCTCACCAAACAGTGCTTGGA +
Preference number: 1 (lower is better)
Translates to: WYWHLSSCLEISLYS*DRIRCFQAHQTVLG
Trigger: TCCAAGCACTGTTTGGTGAGCCTGGAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 90 bp TGTCCCTGCACTCCAGCTTCCTACCATATGCTCCAGAATAACGTCTaGAAAGTGAGCCCCATCCATCAAGTTTGTCACACCTTGCACTCA +
Preference number: 1 (lower is better)
Translates to: CPCTPASYHMLQNNV*KVSPIHQVCHTLHS
Trigger: TGAGTGCAAGGTGTGACAAACTTGATGGATGGGGCTCACTTTCCAGACGTTATTCTGGAGCATATGGTAGGAAGCTGGAGTGCAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 90 bp GCACTCCAGCTTCCTACCATATGCTCCAGAATAACGTCTGGAAAGTaGGCCCCATCCATCAAGTTTGTCACACCTTGCACTCAATCTGCT +
Preference number: 1 (lower is better)
Translates to: ALQLPTICSRITSGK*APSIKFVTPCTQSA
Trigger: AGCAGATTGAGTGCAAGGTGTGACAAACTTGATGGATGGGGCTCACTTTCCAGACGTTATTCTGGAGCATATGGTAGGAAGCTGGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR GCA 90 bp AAGATACCGATGCCGGCCAAACTTCTGTTAGTTTTTATGGAAATTTaGTCCTGGAGGGGCTGGCAGCCCTCACCCTCAGAAATAATCTTG +
Preference number: 1 (lower is better)
Translates to: KIPMPAKLLLVFMEI*SWRGWQPSPSEIIL
Trigger: CAAGATTATTTCTGAGGGTGAGGGCTGCCAGCCCCTCCAGGAGCAAATTTCCATAAAAACTAACAGAAGTTTGGCCGGCATCGGTATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371230.1
3UTR CCA 90 bp TTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTaGTCTCAGGCCAACTCTTATGGTCATTCCACCTTTCCCATCTTC +
Preference number: 1 (lower is better)
Translates to: FPWELPILPNPQKTN*SQANSYGHSTFPIF
Trigger: GAAGATGGGAAAGGTGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 90 bp TTCCCTCTTCTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTaGGAAGAGGTGAAAGAATACAAGAGAGCCTGTCGTGATGCTGAT +
Preference number: 1 (lower is better)
Translates to: FPLLSEFHWAIMNFL*EEVKEYKRACRDAD
Trigger: ATCAGCATCACGACAGGCTCTCTTGTATTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAGAAGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 90 bp CTTACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATaGTCATTCCACCTTTCCCATCTTCCCGTTCATGTGAAAGGGTTA +
Preference number: 1 (lower is better)
Translates to: LTKSPENKLVSGQLL*SFHLSHLPVHVKGL
Trigger: TAACCCTTTCACATGAACGGGAAGATGGGAAAGGTGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 90 bp TTGCTTTTGCTTAAAGAAGTCAGTTCCAACCCTGTTGTAATCCTCTaGTGCCTGTCACTCCAAATTTGGTGTCTCAACAGTGGTCAACAG +
Preference number: 1 (lower is better)
Translates to: LLLLKEVSSNPVVIL*CLSLQIWCLNSGQQ
Trigger: CTGTTGACCACTGTTGAGACACCAAATTTGGAGTGACAGGCATCAGAGGATTACAACAGGGTTGGAACTGACTTCTTTAAGCAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 90 bp CACAGAGTAAACATTTGTTTAAAAGAAGGTGCCCAGTACATTACATaGTGGGGTTTCAGGAGACACTGGGATGAGTACGAGCTATCAAAA +
Preference number: 1 (lower is better)
Translates to: HRVNICLKEGAQYIT*WGFRRHWDEYELSK
Trigger: TTTTGATAGCTCGTACTCATCCCAGTGTCTCCTGAAACCCCATCATGTAATGTACTGGGCACCTTCTTTTAAACAAATGTTTACTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 90 bp ACACTGAGTCATCTTAAACCCAGCTATGAGGGCTCAAATATTTGTTaGGTAAGCATTTGCTTGATTTCTGATTTAATGTTGGGTGGATCT +
Preference number: 1 (lower is better)
Translates to: TLSHLKPSYEGSNIC*VSICLISDLMLGGS
Trigger: AGATCCACCCAACATTAAATCAGAAATCAAGCAAATGCTTACCCAACAAATATTTGAGCCCTCATAGCTGGGTTTAAGATGACTCAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 90 bp ATCTTCTTGAAGTTCAGAGCCAGTTACATTTTCAATCATGTTCAATaGAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAAT +
Preference number: 1 (lower is better)
Translates to: IFLKFRASYIFNHVQ*KRTILLDFHLLLGN
Trigger: ATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGAACATGATTGAAAATGTAACTGGCTCTGAACTTCAAGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 90 bp TTAGAATCAAATCATAGGCAACAAAGCAATTTAAGCAATTTCCCATaGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCT +
Preference number: 1 (lower is better)
Translates to: LESNHRQQSNLSNFP*ELPILPNPQKTNWS
Trigger: AGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTGCCTATGATTTGATTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp GGCAAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTGCTCCTGGAGGGGCTaGCAGCCCTCACCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: GKKGEADLQIPRYRCRPNCSWRG*QPSPSE
Trigger: TTCTGAGGGTGAGGGCTGCCAGCCCCTCCAGGAGCA...GTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
3UTR-3UTR CCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTACGCGTACAGAGGCTCTaGCTCCCAGACCTGCGCTAT +
Preference number: 2 (lower is better)
Translates to: MLMSMPVLSTHHELASMLRVQRL*LPDLRY
Trigger: ATAGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCG...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
3UTR-3UTR GCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTAGGTCTGTTGATCTaGGCGTACAGAGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: MLMSMPVLSTHHELASMLLGLLI*AYRGSG
Trigger: GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAA...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
3UTR-3UTR GCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTTTAGGTCTGTTGATCTaGGCGTACAGAGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LMSMPVLSTHHELASMLFLGLLI*AYRGSG
Trigger: GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAA...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
3UTR-3UTR TCA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCCGTGGAAAGGCTAGATaGTGGAGTCACGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFRGKAR*WSHVLP
Trigger: AGGGAGCACGTGACTCCATCATCTAGCCTTTCCACG...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 90 bp TGCAGACTCCCCATGGTCTTTTGGTATTGGCACCTCAGCTCTTGCTaGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: CRLPMVFWYWHLSSC*EISLYSWDRIRCFQ
Trigger: CTGGAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 90 bp ACCGTGCAGACTCCCCATGGTCTTTTGGTATTGGCACCTCAGCTCTaGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTT +
Preference number: 2 (lower is better)
Translates to: TVQTPHGLLVLAPQL*LGNFTVLLGQDTVL
Trigger: AAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATGTCCATGCCAGTCTTaGGCACCCACCACGAGCTCG +
Preference number: 2 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPCPCQS*APTTSS
Trigger: CGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTCGTGGAAAGGCTAGATaGTGGAGTCACGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGRGKAR*WSHVLP
Trigger: AGGGAGCACGTGACTCCATCATCTAGCCTTTCCACG...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 90 bp AAGAATACAAGAGAGCCTGTCGTGATGCTGATGTCCATGCCAGTCTaGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCT +
Preference number: 2 (lower is better)
Translates to: KNTREPVVMLMSMPV*STHHELASMLFLRS
Trigger: AGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGACAGGCTCTCTTGTATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR GCA 90 bp AGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTGTTTTTATGGAAATTTaGTCCTGGAGGGGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: RREKRISKSQDTDAGQTSVFMEI*SWRGWQ
Trigger: CTGCCAGCCCCTCCAGGAGCAAATTTCCATAAAAAC...AGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371230.1
3UTR CAA 90 bp ATTGATCTAACCAGAACCGTGCAGACTCCCCATGGTCTTTTGGTATaGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: IDLTRTVQTPHGLLV*APQLLLGNFTVLLG
Trigger: TCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCACGGTTCTGGTTAGATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCCCTGTTGTAATCCTCTaGTGCCTGTCACTCCAAATT +
Preference number: 2 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFPVVIL*CLSLQI
Trigger: AATTTGGAGTGACAGGCATCAGAGGATTACAACAGG...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATCTCCAGAATAACGTCTaGAAAGTGAGCCCCATCCAT +
Preference number: 2 (lower is better)
Translates to: SFSCVARRVGTLVERLDDLQNNV*KVSPIH
Trigger: ATGGATGGGGCTCACTTTCCAGACGTTATTCTGGAG...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACACTTAGTTCCCTCTTCTaGGCGAGTTCCATTGGGCAA +
Preference number: 2 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTLSSLF*ASSIGQ
Trigger: TTGCCCAATGGAACTCGCTCAGAAGAGGGAACTAAG...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR GCA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCGCTGCCATAGATATCTaGCATTGGTTGCCAAAAATG +
Preference number: 2 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFAAIDI*HWLPKM
Trigger: CATTTTTGGCAACCAATGGCAGATATCTATGGCAGC...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 90 bp TTTTCTATTGATCTAACCAGAACCGTGCAGACTCCCCATGGTCTTTaGGTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTC +
Preference number: 2 (lower is better)
Translates to: FSIDLTRTVQTPHGL*VLAPQLLLGNFTVL
Trigger: GAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCACGGTTCTGGTTAGATCAATAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCATAACGTCTGGAAAGTaGGCCCCATCCATCAAGTTT +
Preference number: 2 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLITSGK*APSIKF
Trigger: AAACTTGATGGATGGGGCTCACTTTCCAGACGTTAT...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR GCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCCAGCTTCCTACCATATaGTCCAGAATAACGTCTGGA +
Preference number: 2 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLQLPTI*SRITSG
Trigger: TCCAGACGTTATTCTGGAGCATATGGTAGGAAGCTG...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACAAATGAAGGTTCGTACTaGAAGCTGTCTTTCTTCACC +
Preference number: 2 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTNEGSY*KLSFFT
Trigger: GGTGAAGAAAGACAGCTTTCAGTACGAACCTTCATT...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCCTGAGCGAGTTCCATTaGGCAATCATGAATTTCTTG +
Preference number: 2 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLLSEFH*AIMNFL
Trigger: CAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCCCTTCTCACTTTTCTaGTTCTTCGGACCTTCCACA +
Preference number: 2 (lower is better)
Translates to: QQSNLSNFPWELPILPNPPFSLF*FFGPST
Trigger: TGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGG...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 90 bp AATAACGTCTGGAAAGTGAGCCCCATCCATCAAGTTTGTCACACCTaGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTA +
Preference number: 2 (lower is better)
Translates to: NNVWKVSPIHQVCHT*HSICYLLYSVMALL
Trigger: TAATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAAACTTGATGGATGGGGCTCACTTTCCAGACGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCGTACAAACAGTCCAGTaGTTTATATCGGGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: QQSNLSNFPWELPILPNPVQTVQ*FISGVG
Trigger: ACCTACCCCCGATATAAATCACTGGACTGTTTGTAC...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR GCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTACGAGCTCGCATCGATaGTATTTCTTAGGTCTGTTG +
Preference number: 2 (lower is better)
Translates to: LSHLALNLLPSLQCNGIITSSHR*YFLGLL
Trigger: CAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATATCATGAATTTCTTGTaGGAAGAGGTGAAAGAATAC +
Preference number: 2 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDIMNFL*EEVKEY
Trigger: GTATTCTTTCACCTCTTCCCACAAGAAATTCATGAT...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTTGGATGACGATATTGTaGTCACAGAAGACCCTTTGC +
Preference number: 2 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIWMTIL*SQKTLC
Trigger: GCAAAGGGTCTTCTGTGACCACAATATCGTCATCCA...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR GCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAAAGACCCTTTGCTTTTaGTTAAAGAAGTCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPKTLCF*LKKSVP
Trigger: TGGAACTGACTTCTTTAAGCAAAAGCAAAGGGTCTT...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTCTGAGCGAGTTCCATTaGGCAATCATGAATTTCTTG +
Preference number: 2 (lower is better)
Translates to: LSHLALNLLPSLQCNGIILSEFH*AIMNFL
Trigger: CAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 90 bp ACATTACCAGAATTGTACCAGAATTATTTGGCAAATGACTTTTCTTaGAAAATGGCACGTGGAGAAGACACTTGTCTGCATAGCAACACA +
Preference number: 2 (lower is better)
Translates to: TLPELYQNYLANDFS*KMARGEDTCLHSNT
Trigger: TGTGTTGCTATGCAGACAAGTGTCTTCTCCACGTGCCATTTTCAAAGAAAAGTCATTTGCCAAATAATTCTGGTACAATTCTGGTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTACACATCATCCTATGTaGAAAGGCATATGGATGACG +
Preference number: 2 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNITHHPM*KGIWMT
Trigger: CGTCATCCATATGCCTTTTCACATAGGATGATGTGT...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTATAGATATCTGCCATTaGTTGCCAAAAATGCTTAGT +
Preference number: 2 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIIDICH*LPKMLS
Trigger: ACTAAGCATTTTTGGCAACCAATGGCAGATATCTAT...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTACCTCAGCTCTTGCTTaGAAATTTCACTGTACTCCT +
Preference number: 2 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNITSALA*KFHCTP
Trigger: AGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGT...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR TCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTACATGGATTTTCTATTaGTCTAACCAGAACCGTGCA +
Preference number: 2 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNITWIFY*SNQNRA
Trigger: TGCACGGTTCTGGTTAGATCAATAGAAAATCCATGT...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 72 bp AGTCACGTGCTCCCTTCCCGTTCACTAGCTGCTGATTaGCCAACTGCTCCTGCCAGCTGTCCCTGCACTCCA +
Preference number: 3 (lower is better)
Translates to: SHVLPSRSLAAD*PTAPASCPCTP
Trigger: TGGAGTGCAGGGACAGCTGGCAGGAGCAGTTGGCCAATCAGCAGCTAGTGAACGGGAAGGGAGCACGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR GCA 72 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTaGGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCT +
Preference number: 3 (lower is better)
Translates to: SSHRCYFLGLLI*AYRGSGSQTCA
Trigger: AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
3UTR CCA 72 bp CCAGAACCGTGCAGACTCCCCATGGTCTTTTGGTATTaGCACCTCAGCTCTTGCTTGGAAATTTCACTGTAC +
Preference number: 3 (lower is better)
Translates to: PEPCRLPMVFWY*HLSSCLEISLY
Trigger: GTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCACGGTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 72 bp ACTCCAGCTTCCTACCATATGCTCCAGAATAACGTCTaGAAAGTGAGCCCCATCCATCAAGTTTGTCACACC +
Preference number: 3 (lower is better)
Translates to: TPASYHMLQNNV*KVSPIHQVCHT
Trigger: GGTGTGACAAACTTGATGGATGGGGCTCACTTTCCAGACGTTATTCTGGAGCATATGGTAGGAAGCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 72 bp TCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATaGTCATTCCACCTTTCCCATCTTCCCGTTCATGTG +
Preference number: 3 (lower is better)
Translates to: SPENKLVSGQLL*SFHLSHLPVHV
Trigger: CACATGAACGGGAAGATGGGAAAGGTGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATCCCCATCCATCAAGTTaGTCACACCTTGCACTCAAT +
Preference number: 3 (lower is better)
Translates to: SFSCVARRVGTLVERLDDPHPSS*SHLALN
Trigger: ATTGAGTGCAAGGTGTGACAAACTTGATGGATGGGG...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCTGGGCATCTATCTTCTaGAAGTTCAGAGCCAGTTAC +
Preference number: 3 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFWASIF*KFRASY
Trigger: GTAACTGGCTCTGAACTTCAAGAAGATAGATGCCCA...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp TCAATGAAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAATTAACTATGTCCATGCCAGTCTaGAGCACCCACCACGAGCTC +
Preference number: 3 (lower is better)
Translates to: SMKEDNSPGLSPSARKLTMSMPV*STHHEL
Trigger: GAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT...AGTTAATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 72 bp CTTCCTACCATATGCTCCAGAATAACGTCTGGAAAGTaGGCCCCATCCATCAAGTTTGTCACACCTTGCACT +
Preference number: 3 (lower is better)
Translates to: LPTICSRITSGK*APSIKFVTPCT
Trigger: AGTGCAAGGTGTGACAAACTTGATGGATGGGGCTCACTTTCCAGACGTTATTCTGGAGCATATGGTAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp AAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTGTTAGTTTTCCCTCAGAAATAATCTaGGTCTCTCTCCAGGTTTTG +
Preference number: 3 (lower is better)
Translates to: KRISKSQDTDAGQTSVSFPSEII*VSLQVL
Trigger: CAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGG...AAAACTAACAGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
3UTR-3UTR CAA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATATTTCTTAGGTCTGTaGATCTGCGCGTACAGAGGC +
Preference number: 3 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPYFLGL*ICAYRG
Trigger: GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTTCTGAGCGAGTTCCATaGGGCAATCATGAATTTCTT +
Preference number: 3 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGSERVP*GNHEFL
Trigger: AAGAAATTCATGATTGCCCAATGGAACTCGCTCAGA...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCCCTGTCACTCCAAATTaGGTGTCTCAACAGTGGTCA +
Preference number: 3 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLPVTPN*VSQQWS
Trigger: TGACCACTGTTGAGACACCAAATTTGGAGTGACAGG...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 72 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTaGGAAGAGGTGAAAGAATACAAGAGAGCCTGTCGT +
Preference number: 3 (lower is better)
Translates to: LSEFHWAIMNFL*EEVKEYKRACR
Trigger: ACGACAGGCTCTCTTGTATTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCATCAGGAAAACACACTaGACCTGTATAACAATTCTC +
Preference number: 3 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFIRKTH*TCITIL
Trigger: GAGAATTGTTATACAGGTCAAGTGTGTTTTCCTGAT...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 72 bp GAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTaGTCTCAGGCCAACTCTTATGGTCATTCCACCTTT +
Preference number: 3 (lower is better)
Translates to: ELPILPNPQKTN*SQANSYGHSTF
Trigger: AAAGGTGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 72 bp CTTAAAGAAGTCAGTTCCAACCCTGTTGTAATCCTCTaGTGCCTGTCACTCCAAATTTGGTGTCTCAACAGT +
Preference number: 3 (lower is better)
Translates to: LKEVSSNPVVIL*CLSLQIWCLNS
Trigger: ACTGTTGAGACACCAAATTTGGAGTGACAGGCATCAGAGGATTACAACAGGGTTGGAACTGACTTCTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 72 bp AACATTTGTTTAAAAGAAGGTGCCCAGTACATTACATaGTGGGGTTTCAGGAGACACTGGGATGAGTACGAG +
Preference number: 3 (lower is better)
Translates to: NICLKEGAQYIT*WGFRRHWDEYE
Trigger: CTCGTACTCATCCCAGTGTCTCCTGAAACCCCATCATGTAATGTACTGGGCACCTTCTTTTAAACAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCATATGGATGACGATATaGTGGTCACAGAAGACCCTT +
Preference number: 3 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESIWMTI*WSQKTL
Trigger: AAGGGTCTTCTGTGACCACAATATCGTCATCCATAT...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR GCA 72 bp CCAAACCCACAGAGTAAACATTTGTTTAAAAGAAGGTaGCCAGTACATTACATGATGGGGTTTCAGGAGACA +
Preference number: 3 (lower is better)
Translates to: PNPQSKHLFKRR*PVHYMMGFQET
Trigger: TGTCTCCTGAAACCCCATCATGTAATGTACTGGGCACCTTCTTTTAAACAAATGTTTACTCTGTGGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp TCAATGAAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAATTAACTCAAGTTTGTCACACCTaGCACTCAATCTGCTACCTT +
Preference number: 3 (lower is better)
Translates to: SMKEDNSPGLSPSARKLTQVCHT*HSICYL
Trigger: AAGGTAGCAGATTGAGTGCAAGGTGTGACAAACTTG...AGTTAATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAATCAGGAAAACACACTaGACCTGTATAACAATTCTC +
Preference number: 3 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPIRKTH*TCITIL
Trigger: GAGAATTGTTATACAGGTCAAGTGTGTTTTCCTGAT...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAACAAGTTTGTCACACCTaGCACTCAATCTGCTACCTT +
Preference number: 3 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQQVCHT*HSICYL
Trigger: AAGGTAGCAGATTGAGTGCAAGGTGTGACAAACTTG...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR GCA 72 bp CCCATCCATCAAGTTTGTCACACCTTGCACTCAATCTaGTACCTTCTCTACAGTGTAATGGCATTATTAAAA +
Preference number: 3 (lower is better)
Translates to: PIHQVCHTLHSI*YLLYSVMALLK
Trigger: TTTTAATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAAACTTGATGGATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAAGATATCTGCCATTGGTaGCCAAAAATGCTTAGTTCC +
Preference number: 3 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQDICHW*PKMLSS
Trigger: GGAACTAAGCATTTTTGGCAACCAATGGCAGATATC...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 72 bp TATGGTCATTCCACCTTTCCCATCTTCCCGTTCATGTaGAAGGGTTACCTAATCATAAAATGTTTGCTCATT +
Preference number: 3 (lower is better)
Translates to: YGHSTFPIFPFM*KGYLIIKCLLI
Trigger: AATGAGCAAACATTTTATGATTAGGTAACCCTTTCACATGAACGGGAAGATGGGAAAGGTGGAATGACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR TCA 72 bp CCTTACTTTAATGCATCACTTGGGCATCTATCTTCTTaGAGTTCAGAGCCAGTTACATTTTCAATCATGTTC +
Preference number: 3 (lower is better)
Translates to: PYFNASLGHLSS*SSEPVTFSIMF
Trigger: GAACATGATTGAAAATGTAACTGGCTCTGAACTTCAAGAAGATAGATGCCCAAGTGATGCATTAAAGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR-3UTR CAA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAAACCACATTACCAGAATaGTACCAGAATTATTTGGCA +
Preference number: 3 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQTTLPE*YQNYLA
Trigger: TGCCAAATAATTCTGGTACAATTCTGGTAATGTGGT...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CCA 72 bp CATCTTAAACCCAGCTATGAGGGCTCAAATATTTGTTaGGTAAGCATTTGCTTGATTTCTGATTTAATGTTG +
Preference number: 3 (lower is better)
Translates to: HLKPSYEGSNIC*VSICLISDLML
Trigger: CAACATTAAATCAGAAATCAAGCAAATGCTTACCCAACAAATATTTGAGCCCTCATAGCTGGGTTTAAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATAGGGCTGGTCGGGTTTaGGGGAGGGCACGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDRAGRV*GRARAE
Trigger: CTCCGCCCGTGCCCTCCCGCAAACCCGACCAGCCCT...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTAGGGCTGGTCGGGTTTaGGGGAGGGCACGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDARAGRV*GRARAE
Trigger: CTCCGCCCGTGCCCTCCCGCAAACCCGACCAGCCCT...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACACCCGGCTGGCCCCATaGGATGGGCTGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYTRLAP*DGLSPR
Trigger: CCGGGGGCTCAGCCCATCGCATGGGGCCAGCCGGGT...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTACCCGGCTGGCCCCATaGGATGGGCTGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFTRLAP*DGLSPR
Trigger: CCGGGGGCTCAGCCCATCGCATGGGGCCAGCCGGGT...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCGGCTGGCGGAAACTaGCCGGCCACAGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDAAGGN*PATVGQ
Trigger: CTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCGC...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp AGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTCACTCAGGCGCGCTCTaGAGCCCGGGGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RREKRISKSQDTDAGQTSHSGAL*SPGKPG
Trigger: CCCGGGCTTCCCCGGGCTGCAGAGCGCGCCTGAGTG...AGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR GCA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCCACTCAGGCGCGCTCTaGAGCCCGGGGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLHSGAL*SPGKPG
Trigger: CCCGGGCTTCCCCGGGCTGCAGAGCGCGCCTGAGTG...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371236.7
CDS-3UTR TCA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGTGGACGAGGGGCTGCTaGCCCCAGAAGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLWTRGC*PQKDGR
Trigger: CCTCCCGTCCTTCTGGGGTCAGCAGCCCCTCGTCCA...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCGCCCCCGGCATCACCTaGGCGACTGGTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLAPGIT*ATGGWA
Trigger: TGCCCAGCCACCAGTCGCTCAGGTGATGCCGGGGGC...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCGCCCCCGGCATCACCTaGGCGACTGGTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGAPGIT*ATGGWA
Trigger: TGCCCAGCCACCAGTCGCTCAGGTGATGCCGGGGGC...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTGTTGGCCAGGGCTGCTaGGTGGCAGGAAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAVGQGC*VAGKRP
Trigger: GGGTCTCTTTCCTGCCACTCAGCAGCCCTGGCCAAC...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCGGCTGGCGGAAACTaGCCGGCCACAGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRAAGGN*PATVGQ
Trigger: CTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCGC...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATTGGTGGAGTCACTCGTaGCTGGGACGGTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDWWSHS*LGRWQG
Trigger: CCCTTGCCACCGTCCCAGGCACGAGTGACTCCACCA...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGTGGTGGAGTCACTCGTaGCTGGGACGGTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: VMLMSMPVLSTHHELASMWWSHS*LGRWQG
Trigger: CCCTTGCCACCGTCCCAGGCACGAGTGACTCCACCA...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGGGCATGAAGGCGGCTaGCGGAAACTGCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRGHEGG*RKLPGH
Trigger: GTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCC...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCAGGTGAGGGAGGGCTaGTCGGGTTTGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFQVREG*SGLREG
Trigger: GCCCTCCCGCAAACCCGACCAGCCCTCCCTCACCTG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCAGCATCCTCCTCCGCTaGCGCAGCCGCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGSILLR*RSRPGS
Trigger: GCTTCCTGGGCGGCTGCGGCAGCGGAGGAGGATGCT...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371236.7
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCGCTGGCCCCATGCGATaGGCTGAGCCCCCGGCATCA +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSAGPMR*AEPPAS
Trigger: TGATGCCGGGGGCTCAGCCCATCGCATGGGGCCAGC...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTCTGCCCGGCCACAGTTaGCCAGGGCTGCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLLPGHS*PGLLSG
Trigger: GCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAG...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTGGCACGGGCGGAGGCTaGGCCATCTGGAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAGTGGG*AIWKSL
Trigger: TAAGGATTTCCAGATGGCCCAGCCTCCGCCCGTGCC...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGCACTGGGCTCCCCACTaGGCTCACCAAATGGATCAC +
Preference number: 4 (lower is better)
Translates to: VVMLMSMPVLSTHHELASHWAPH*AHQMDH
Trigger: GTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTG...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTTGGACGAGGGGCTGCTaGCCCCAGAAGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSWTRGC*PQKDGR
Trigger: CCTCCCGTCCTTCTGGGGTCAGCAGCCCCTCGTCCA...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTAGTGGCTGGGCACCCATaGCCATCTGCTGTTGGACGA +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLVAGHP*PSAVGR
Trigger: TCGTCCAACAGCAGATGGTCATGGGTGCCCAGCCAC...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCCAGTTTGTGTGGGCATaGAGGCGGCTGGCGGAAACT +
Preference number: 4 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRQFVWA*RRLAET
Trigger: AGTTTCCGCCAGCCGCCTTCATGCCCACACAAACTG...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCCTCTGAGGTACAGGTaGGGGAGGGCTGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLPLRYR*GRAGRV
Trigger: AACCCGACCAGCCCTCCCTCACCTGTACCTCAGAGG...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCCTCTGAGGTACAGGTaGGGGAGGGCTGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFPLRYR*GRAGRV
Trigger: AACCCGACCAGCCCTCCCTCACCTGTACCTCAGAGG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATGTCCATGCCAGTCTTaGGCACCCACCACGAGCTCG +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLCPCQS*APTTSS
Trigger: CGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACA...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTGTCCATGCCAGTCTTaGGCACCCACCACGAGCTCG +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICACPCQS*APTTSS
Trigger: CGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACA...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTACACCTGAGCGACTGGTaGCTGGGCACCCATGACCAT +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLHLSDW*LGTHDH
Trigger: ATGGTCATGGGTGCCCAGCCACCAGTCGCTCAGGTG...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGGCCAGGGCTGCTGAGTaGCAGGAAAGAGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLARAAE*QERDPA
Trigger: AGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCTGGC...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTGGGGTGAGGGGACCTTaGAACATGGCAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAGVRGP*NMAAGK
Trigger: TTTGCCAGCTGCCATGTTCCAAGGTCCCCTCACCCC...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCGTGGACTTGACCTGGTaGAGTCACTCGTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRVDLTW*SHSCLG
Trigger: TCCCAGGCACGAGTGACTCCACCAGGTCAAGTCCAC...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGTCTGTGGACTTGACCTaGTGGAGTCACTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VVMLMSMPVLSTHHELASSVDLT*WSHSCL
Trigger: CAGGCACGAGTGACTCCACCAGGTCAAGTCCACAGA...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTCAGGTGAGGGAGGGCTaGTCGGGTTTGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSQVREG*SGLREG
Trigger: GCCCTCCCGCAAACCCGACCAGCCCTCCCTCACCTG...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GCAAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTGCTCCTGGAGGGGCTaGCAGCCCTCACCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: ARREKRISKSQDTDAGQTCSWRG*QPSPSE
Trigger: TTCTGAGGGTGAGGGCTGCCAGCCCCTCCAGGAGCA...AGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCGTTGGCCAGGGCTGCTaGGTGGCAGGAAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLVGQGC*VAGKRP
Trigger: GGGTCTCTTTCCTGCCACTCAGCAGCCCTGGCCAAC...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGGTCGGTCTGTGGACTTaGCCTGGTGGAGTCACTCGT +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICAVGLWT*PGGVTR
Trigger: ACGAGTGACTCCACCAGGTCAAGTCCACAGACCGAC...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTCGGCCAGGCTCATTaGGGACTCTTCTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VMLMSMPVLSTHHELASMLGQAH*GLFSKR
Trigger: TCTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAG...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTCGTGGAAAGGCTAGATaGTGGAGTCACGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDARGKAR*WSHVLP
Trigger: AGGGAGCACGTGACTCCATCATCTAGCCTTTCCACG...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGCTTGTCTCCCCGAGCTaGGGAAACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: VVMLMSMPVLSTHHELASLVSPS*GNFINP
Trigger: GGGATTGATGAAGTTTCCGCAGCTCGGGGAGACAAG...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAACCCGGCTGGCCCCATaGGATGGGCTGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPTRLAP*DGLSPR
Trigger: CCGGGGGCTCAGCCCATCGCATGGGGCCAGCCGGGT...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTTGGTGGAGTCACTCGTaGCTGGGACGGTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLWWSHS*LGRWQG
Trigger: CCCTTGCCACCGTCCCAGGCACGAGTGACTCCACCA...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCACAGGAGCATCCTCCTCCGCTaGCGCAGCCGCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GFAVSGFFRFLTKWLWHRSILLR*RSRPGS
Trigger: GCTTCCTGGGCGGCTGCGGCAGCGGAGGAGGATGCT...CCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCACCTGAGCGACTGGTaGCTGGGCACCCATGACCAT +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFHLSDW*LGTHDH
Trigger: ATGGTCATGGGTGCCCAGCCACCAGTCGCTCAGGTG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGCATCACCTGAGCGACTaGTGGCTGGGCACCCATGAC +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRHHLSD*WLGTHD
Trigger: GTCATGGGTGCCCAGCCACCAGTCGCTCAGGTGATG...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCGCCAGGGCTGCTGAGTaGCAGGAAAGAGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSARAAE*QERDPA
Trigger: AGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCTGGC...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTTCTGTGGACTTGACCTaGTGGAGTCACTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCASVDLT*WSHSCL
Trigger: CAGGCACGAGTGACTCCACCAGGTCAAGTCCACAGA...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTTCTGTGGACTTGACCTaGTGGAGTCACTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDASVDLT*WSHSCL
Trigger: CAGGCACGAGTGACTCCACCAGGTCAAGTCCACAGA...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGGCACGGGCGGAGGCTaGGCCATCTGGAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: YFLGLLICAYRGSGSQTCGTGGG*AIWKSL
Trigger: TAAGGATTTCCAGATGGCCCAGCCTCCGCCCGTGCC...GCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTGGCACGGGCGGAGGCTaGGCCATCTGGAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: DVHASLEHPPRARIDAISGTGGG*AIWKSL
Trigger: TAAGGATTTCCAGATGGCCCAGCCTCCGCCCGTGCC...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATCAGGTGAGGGAGGGCTaGTCGGGTTTGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SFSCVARRVGTLVERLDDQVREG*SGLREG
Trigger: GCCCTCCCGCAAACCCGACCAGCCCTCCCTCACCTG...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCCGCGTACAGAGGCTCTaGCTCCCAGACCTGCGCTAT +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRRVQRL*LPDLRY
Trigger: ATAGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCG...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCGTGGCTGGGCACCCATaGCCATCTGCTGTTGGACGA +
Preference number: 4 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGVAGHP*PSAVGR
Trigger: TCGTCCAACAGCAGATGGTCATGGGTGCCCAGCCAC...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGCAGTTTGTGTGGGCATaGAGGCGGCTGGCGGAAACT +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRQFVWA*RRLAET
Trigger: AGTTTCCGCCAGCCGCCTTCATGCCCACACAAACTG...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCAGTTTGTGTGGGCATaGAGGCGGCTGGCGGAAACT +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFQFVWA*RRLAET
Trigger: AGTTTCCGCCAGCCGCCTTCATGCCCACACAAACTG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCGTCGGTCTGTGGACTTaGCCTGGTGGAGTCACTCGT +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTVGLWT*PGGVTR
Trigger: ACGAGTGACTCCACCAGGTCAAGTCCACAGACCGAC...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCGGCTGGGGTTGGAGGTaGGTTGGTCGATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLGWGWR*VGRWCG
Trigger: ACCACACCATCGACCAACTCACCTCCAACCCCAGCC...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCCGTTCACTAGCTGCTaGTTGGCCAACTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLPFTSC*LANCSC
Trigger: GCAGGAGCAGTTGGCCAATCAGCAGCTAGTGAACGG...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTAGAATGGGGACAGAATaGCAGGTGGTGTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDARMGTE*QVVFPW
Trigger: CCAGGGAAACACCACCTGTCATTCTGTCCCCATTCT...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCGCACCCATGACCATCTaGTGTTGGACGAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGAPMTI*CWTRGC
Trigger: GCAGCCCCTCGTCCAACAGCAGATGGTCATGGGTGC...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTACAGGTTCAGCCGCCTaGGCTGTTTTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDATGSAA*AVFMAT
Trigger: TGTGGCCATAAAAACAGCCCAGGCGGCTGAACCTGT...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGCTTCCTTCTTTTGGCTaGTGGGAACCTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: VVMLMSMPVLSTHHELASLPSFG*WEPGTQ
Trigger: CTGTGTACCAGGTTCCCACCAGCCAAAAGAAGGAAG...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTCATCACCTGAGCGACTaGTGGCTGGGCACCCATGAC +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLHHLSD*WLGTHD
Trigger: GTCATGGGTGCCCAGCCACCAGTCGCTCAGGTGATG...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTGCCCATTTTCTGCCTaGGCTTGTCGGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICACPFSA*ACRSVD
Trigger: GTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCA...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATGCCCATTTTCTGCCTaGGCTTGTCGGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLCPFSA*ACRSVD
Trigger: GTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCA...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTCACTAGCTGCTGATTaGCCAACTGCTCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICASLAAD*PTAPAS
Trigger: GCTGGCAGGAGCAGTTGGCCAATCAGCAGCTAGTGA...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp ACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTaGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: TTSSHRCYFLGL*ICAYRGSGSQT
Trigger: GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACCATTGCAACGTAACCTaGGGGTACAGCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYHCNVT*GYSSSA
Trigger: GGCACTGCTGCTGTACCCTCAGGTTACGTTGCAATG...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGCATTGCAACGTAACCTaGGGGTACAGCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRHCNVT*GYSSSA
Trigger: GGCACTGCTGCTGTACCCTCAGGTTACGTTGCAATG...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCATTGCAACGTAACCTaGGGGTACAGCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFHCNVT*GYSSSA
Trigger: GGCACTGCTGCTGTACCCTCAGGTTACGTTGCAATG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGAGAATGGGGACAGAATaGCAGGTGGTGTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICARMGTE*QVVFPW
Trigger: CCAGGGAAACACCACCTGTCATTCTGTCCCCATTCT...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCTTGTCTCCCCGAGCTaGGGAAACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICALVSPS*GNFINP
Trigger: GGGATTGATGAAGTTTCCGCAGCTCGGGGAGACAAG...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTTCTTTGCCCATTTTCTaGCTGGGCTTGTCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDASLPIF*LGLSVC
Trigger: ACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGA...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGTCGTCTGTATCCTGTaGCACCCCGACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDVVCIL*HPDFVE
Trigger: TTCAACAAAGTCGGGGTGGCACAGGATACAGACGAC...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTGTCGTCTGTATCCTGTaGCACCCCGACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDAVVCIL*HPDFVE
Trigger: TTCAACAAAGTCGGGGTGGCACAGGATACAGACGAC...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCCATCAGGAGCTTCTTaGTCTTCGCTTTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VMLMSMPVLSTHHELASMPSGAS*SSLLLG
Trigger: TCCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGG...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGCAATCCCGATCAATTTaGCTTTGTACCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: VVMLMSMPVLSTHHELASQSRSI*LCTGPL
Trigger: AAGGGGTCCGGTACAAAGCCAAATTGATCGGGATTG...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTCATCACCTGAGCGACTaGTGGCTGGGCACCCATGAC +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSHHLSD*WLGTHD
Trigger: GTCATGGGTGCCCAGCCACCAGTCGCTCAGGTGATG...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAAGCTGGCCCCATGCGATaGGCTGAGCCCCCGGCATCA +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKEAGPMR*AEPPAS
Trigger: TGATGCCGGGGGCTCAGCCCATCGCATGGGGCCAGC...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAGCTGGCCCCATGCGATaGGCTGAGCCCCCGGCATCA +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPAGPMR*AEPPAS
Trigger: TGATGCCGGGGGCTCAGCCCATCGCATGGGGCCAGC...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACACTGCCCGGCCACAGTTaGCCAGGGCTGCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTLPGHS*PGLLSG
Trigger: GCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAG...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAGGGCATGAAGGCGGCTaGCGGAAACTGCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPGHEGG*RKLPGH
Trigger: GTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCC...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCGGGGTGAGGGGACCTTaGAACATGGCAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGGVRGP*NMAAGK
Trigger: TTTGCCAGCTGCCATGTTCCAAGGTCCCCTCACCCC...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCCCATTTTCTGCCTaGGCTTGTCGGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTCPFSA*ACRSVD
Trigger: GTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCA...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTTATATTATCACCACTaGGCTCCCCACTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRLYYHH*APHWAH
Trigger: GTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAA...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCGTGTTGCACGTAGGGTaGGGACTCTCGTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGVLHVG*GLSWKG
Trigger: GCCTTTCCACGAGAGTCCCCACCCTACGTGCAACAC...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCCTCCCCATGGTCTTTTaGTATTGGCACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRLPMVF*YWHLSS
Trigger: AGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAG...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCGTGCAGACTCCCCATaGTCTTTTGGTATTGGCACC +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICARADSP*SFGIGT
Trigger: GGTGCCAATACCAAAAGACCATGGGGAGTCTGCACG...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp AGAGAGCCTGTCGTGATGCTGATGTCCATGCCAGTCTaGAGCACCCACCACGAGCTCGCATCGATGCTATTT +
Preference number: 4 (lower is better)
Translates to: REPVVMLMSMPV*STHHELASMLF
Trigger: AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGACAGGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTATCCAAAGGCCCGGTaGTCTGTAATGTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRYPKAR*SVMSFA
Trigger: TGCAAAGGACATTACAGATCACCGGGCCTTTGGATA...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATTATCCAAAGGCCCGGTaGTCTGTAATGTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDYPKAR*SVMSFA
Trigger: TGCAAAGGACATTACAGATCACCGGGCCTTTGGATA...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCTGGACGAGGGGCTGCTaGCCCCAGAAGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESWTRGC*PQKDGR
Trigger: CCTCCCGTCCTTCTGGGGTCAGCAGCCCCTCGTCCA...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTGTGGCTGGGCACCCATaGCCATCTGCTGTTGGACGA +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGVAGHP*PSAVGR
Trigger: TCGTCCAACAGCAGATGGTCATGGGTGCCCAGCCAC...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTCTCGGCCAGGCTCATTaGGGACTCTTCTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: RREKRISKSQDTDAGQTSLGQAH*GLFSKR
Trigger: TCTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAG...AGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCCCGTTCACTAGCTGCTaGTTGGCCAACTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFPFTSC*LANCSC
Trigger: GCAGGAGCAGTTGGCCAATCAGCAGCTAGTGAACGG...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp GCAAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTCTTGTCTCCCCGAGCTaGGGAAACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: ARREKRISKSQDTDAGQTLVSPS*GNFINP
Trigger: GGGATTGATGAAGTTTCCGCAGCTCGGGGAGACAAG...AGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR GCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTCTTTGCCCATTTTCTaGCTGGGCTTGTCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICASLPIF*LGLSVC
Trigger: ACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGA...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTCTTGCTCTTCGCTTTTaGTGGGACTTTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCALALRF*WDFQSP
Trigger: AGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAG...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACTTAGGTCTGTTGATCTaGGCGTACAGAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYLGLLI*AYRGSG
Trigger: GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAA...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTCAATCCCGATCAATTTaGCTTTGTACCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAQSRSI*LCTGPL
Trigger: AAGGGGTCCGGTACAAAGCCAAATTGATCGGGATTG...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTGGCTGGTGGGAACCTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRWLVGT*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGGTTCCCACCAGCCA...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CCA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTGGTTTCTGTTCGGGGTaGCTGCAGCAAACCGTTCTT +
Preference number: 4 (lower is better)
Translates to: DVHASLEHPPRARIDAISGFCSG*LQQTVL
Trigger: AAGAACGGTTTGCTGCAGCCACCCCGAACAGAAACC...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CCA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTCTGGAGTTGCAGGAGTaGGGGGAGAGGTTATATCAG +
Preference number: 4 (lower is better)
Translates to: DVHASLEHPPRARIDAISLELQE*GERLYQ
Trigger: CTGATATAACCTCTCCCCCCACTCCTGCAACTCCAG...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGTGGACTTGACCTGGTaGAGTCACTCGTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSVDLTW*SHSCLG
Trigger: TCCCAGGCACGAGTGACTCCACCAGGTCAAGTCCAC...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTGGAGGCTGGGCCATCTaGAAATCCTTAAACGTTTCT +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAGGWAI*KSLNVS
Trigger: AGAAACGTTTAAGGATTTCCAGATGGCCCAGCCTCC...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATCCCTTCTCACTTTTCTaGTTCTTCGGACCTTCCACA +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDPFSLF*FFGPST
Trigger: TGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGG...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGATTTCACTGTACTCCTaGGACAGGATACGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VMLMSMPVLSTHHELASMISLYS*DRIRCF
Trigger: GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAAT...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATATCCAAAGGCCCGGTaGTCTGTAATGTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLYPKAR*SVMSFA
Trigger: TGCAAAGGACATTACAGATCACCGGGCCTTTGGATA...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGATGGCCACAAATCTGTaGTTCCCTTCCTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICAMATNL*FPSFPQ
Trigger: TTGTGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACCTCGCTGGAAGGGTCTaGGATGAAGATGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYLAGRV*DEDGIK
Trigger: CTTTATCCCATCTTCATCTCAGACCCTTCCAGCGAG...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATGTCGGTCTGTGGACTTaGCCTGGTGGAGTCACTCGT +
Preference number: 4 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDVGLWT*PGGVTR
Trigger: ACGAGTGACTCCACCAGGTCAAGTCCACAGACCGAC...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTGGCATGGGATGCAGATaGTTTGGATGGAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLGMGCR*FGWRAL
Trigger: CAGAGCTCTCCATCCAAATCATCTGCATCCCATGCC...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTCCTGTTGTAATCCTCTaGTGCCTGTCACTCCAAATT +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAPVVIL*CLSLQI
Trigger: AATTTGGAGTGACAGGCATCAGAGGATTACAACAGG...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGAGCCAGAGTTCACTTTaGATGTGTCAGAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICASQSSL*MCQKQP
Trigger: GGGTTGCTTCTGACACATTCAAAGTGAACTCTGGCT...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGTCAGAACGCAGAAATTaGAATGAACCAAACCCACAG +
Preference number: 4 (lower is better)
Translates to: VVMLMSMPVLSTHHELASSERRN*NEPNPQ
Trigger: CTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGA...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGCCATCAGGAGCTTCTTaGTCTTCGCTTTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRPSGAS*SSLLLG
Trigger: TCCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGG...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCCCATCAGGAGCTTCTTaGTCTTCGCTTTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRPSGAS*SSLLLG
Trigger: TCCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGG...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTTAGGTCTGTTGATCTaGGCGTACAGAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLLGLLI*AYRGSG
Trigger: GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAA...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGGAGAAGACACTTGTCTaGATAGCAACACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VMLMSMPVLSTHHELASMEKTLV*IATQQQ
Trigger: TTGCTGCTGTGTTGCTATGCAGACAAGTGTCTTCTC...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: VVMLMSMPVLSTHHELASSLSWR*FSQLLE
Trigger: TTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACT...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTACAATCCCGATCAATTTaGCTTTGTACCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLQSRSI*LCTGPL
Trigger: AAGGGGTCCGGTACAAAGCCAAATTGATCGGGATTG...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCCTGGGCTGTTTTTATaGCCACAAATCTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: VMLMSMPVLSTHHELASMPGLFL*PQICDS
Trigger: GGAATCACAGATTTGTGGCCATAAAAACAGCCCAGG...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCACAGGTTCAGCCGCCTaGGCTGTTTTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSTGSAA*AVFMAT
Trigger: TGTGGCCATAAAAACAGCCCAGGCGGCTGAACCTGT...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGCCTTCTTTTGGCTGGTaGGAACCTGGTACACAGCTT +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRPSFGW*EPGTQL
Trigger: AAGCTGTGTACCAGGTTCCCACCAGCCAAAAGAAGG...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTCCAAAAAGTTCTAATTaGGTCACAGCCTTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAPKSSN*VTAFVA
Trigger: GGCAACGAAGGCTGTGACCCAATTAGAACTTTTTGG...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCTGGAGTTGCAGGAGTaGGGGGAGAGGTTATATCAG +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSLELQE*GERLYQ
Trigger: CTGATATAACCTCTCCCCCCACTCCTGCAACTCCAG...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTTCGGGATCACGGATTaGCTCGTGTCCAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGFGITD*LVSSLK
Trigger: TTTGAGGCTGGACACGAGCCAATCCGTGATCCCGAA...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATCACTGGGCTCCCCACTaGGCTCACCAAATGGATCAC +
Preference number: 4 (lower is better)
Translates to: SFSCVARRVGTLVERLDDHWAPH*AHQMDH
Trigger: GTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTG...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTTGGATGACGATATTGTaGTCACAGAAGACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAWMTIL*SQKTLC
Trigger: GCAAAGGGTCTTCTGTGACCACAATATCGTCATCCA...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTCTCCCCATGGTCTTTTaGTATTGGCACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DVHASLEHPPRARIDAISLPMVF*YWHLSS
Trigger: AGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAG...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTGGACAGAATGACAGGTaGTGTTTCCCTGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAGQNDR*CFPGFK
Trigger: TTTGAAACCAGGGAAACACCACCTGTCATTCTGTCC...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGTTTTCACAGCTACTTaGAGTTCTGTCTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDVFTAT*SSVSVD
Trigger: GTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAAC...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTACAGCAACAACGCCCTTaGGTTTCATCATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLQQQRP*VSSWNL
Trigger: AAGATTCCATGATGAAACTCAAGGGCGTTGTTGCTG...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCATGGCCACAAATCTGTaGTTCCCTTCCTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTMATNL*FPSFPQ
Trigger: TTGTGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAAGGCTGGGGTTGGAGGTaGGTTGGTCGATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKEGWGWR*VGRWCG
Trigger: ACCACACCATCGACCAACTCACCTCCAACCCCAGCC...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCACAGGAACTTTTACAGACTGTaGAGGGGGCCGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GFAVSGFFRFLTKWLWHRNFYRL*RGPRQR
Trigger: CCTCTGCCTCGGCCCCCTTCACAGTCTGTAAAAGTT...CCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCGGCATGTAAAGATTaGAGAGCTATGGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRAACKD*RAMENG
Trigger: CCCATTCTCCATAGCTCTTCAATCTTTACATGCCGC...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTGGTCACAGCCTTCGTTaGCTCAAAAATCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAGHSLR*LKNLIK
Trigger: TTTGATGAGATTTTTGAGGCAACGAAGGCTGTGACC...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR GCA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCGTCGTCTGTATCCTGTaGCACCCCGACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLVVCIL*HPDFVE
Trigger: TTCAACAAAGTCGGGGTGGCACAGGATACAGACGAC...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTAGAGAAGACACTTGTCTaGATAGCAACACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLEKTLV*IATQQQ
Trigger: TTGCTGCTGTGTTGCTATGCAGACAAGTGTCTTCTC...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTTGGGACAGGATACGGTaGTTCCAGGCTCACCAAACA +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSWDRIR*FQAHQT
Trigger: TGTTTGGTGAGCCTGGAAGCACCGTATCCTGTCCCA...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCACAGGTTCAGCCGCCTaGGCTGTTTTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFTGSAA*AVFMAT
Trigger: TGTGGCCATAAAAACAGCCCAGGCGGCTGAACCTGT...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAACACCTGAGCGACTGGTaGCTGGGCACCCATGACCAT +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKEHLSDW*LGTHDH
Trigger: ATGGTCATGGGTGCCCAGCCACCAGTCGCTCAGGTG...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCGCCAGGGCTGCTGAGTaGCAGGAAAGAGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESARAAE*QERDPA
Trigger: AGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCTGGC...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTTGGAACATGGCAGCTaGCAAAGGCATAACAGTTTG +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICALEHGS*QRHNSL
Trigger: CAAACTGTTATGCCTTTGCCAGCTGCCATGTTCCAA...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGGGGTCAAATTCAACTaGGAGATGTCAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDGVKFN*EMSKSS
Trigger: TGATGACTTTGACATCTCCCAGTTGAATTTGACCCC...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCGGGGTCAAATTCAACTaGGAGATGTCAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRGVKFN*EMSKSS
Trigger: TGATGACTTTGACATCTCCCAGTTGAATTTGACCCC...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCTCTTCGCTTTTGCTaGGACTTTCAAAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRALRFC*DFQSPL
Trigger: AAGAGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGC...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCGCTCTTCGCTTTTGCTaGGACTTTCAAAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTALRFC*DFQSPL
Trigger: AAGAGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGC...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCAAATGGATCACTGTTaGATGAGGCCTGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICAQMDHC*MRPVIH
Trigger: ATGGATCACAGGCCTCATCCAACAGTGATCCATTTG...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCTTATATTATCACCACTaGGCTCCCCACTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSLYYHH*APHWAH
Trigger: GTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAA...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTTATATTATCACCACTaGGCTCCCCACTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGLYYHH*APHWAH
Trigger: GTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAA...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTGTCACTCCAAATTTaGTGTCTCAACAGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: VMLMSMPVLSTHHELASMLSLQI*CLNSGQ
Trigger: TTGACCACTGTTGAGACACCAAATTTGGAGTGACAG...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATTTTGAAAATGGCACGTaGAGAAGACACTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDFENGT*RRHLSA
Trigger: TGCAGACAAGTGTCTTCTCCACGTGCCATTTTCAAA...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATACCTCAGCTCTTGCTTaGAAATTTCACTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDTSALA*KFHCTP
Trigger: AGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGT...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTCGTGCAGACTCCCCATaGTCTTTTGGTATTGGCACC +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSRADSP*SFGIGT
Trigger: GGTGCCAATACCAAAAGACCATGGGGAGTCTGCACG...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GGCAAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GKKGEADLQIPRYRCRPNFIMES*HNLSPR
Trigger: TCGGGGAGACAAGTTATGTCAAGATTCCATGATGAA...GTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp AAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTATCCAAAGGCCCGGTaGTCTGTAATGTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KKGEADLQIPRYRCRPNFYPKAR*SVMSFA
Trigger: TGCAAAGGACATTACAGATCACCGGGCCTTTGGATA...GAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCATGGCCACAAATCTGTaGTTCCCTTCCTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGMATNL*FPSFPQ
Trigger: TTGTGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTGGAAGGGTCTGAGATaGAGATGGGATAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGWKGLR*RWDKGI
Trigger: GATGCCTTTATCCCATCTTCATCTCAGACCCTTCCA...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTGGAAGGGTCTGAGATaGAGATGGGATAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGWKGLR*RWDKGI
Trigger: GATGCCTTTATCCCATCTTCATCTCAGACCCTTCCA...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTCCTCTGAGGTACAGGTaGGGGAGGGCTGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIPLRYR*GRAGRV
Trigger: AACCCGACCAGCCCTCCCTCACCTGTACCTCAGAGG...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTCCTCCCTTCAGAAATaGCACTCTGAGCTGCACATT +
Preference number: 4 (lower is better)
Translates to: KKGEADLQIPRYRCRPNFSSLQK*HSELHI
Trigger: AATGTGCAGCTCAGAGTGTCATTTCTGAAGGGAGGA...GAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACTCCATTGGGCAATCATaGATTTCTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYSIGQS*ISCGKR
Trigger: CCTCTTCCCACAAGAAATTCATGATTGCCCAATGGA...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATCAAATGACTTTTCTTTaGAAATGGCACGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDQMTFL*KWHVEK
Trigger: CTTCTCCACGTGCCATTTTCAAAGAAAAGTCATTTG...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCATAACGTCTGGAAAGTaGGCCCCATCCATCAAGTTT +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTITSGK*APSIKF
Trigger: AAACTTGATGGATGGGGCTCACTTTCCAGACGTTAT...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATACATGGATTTTCTATTaGTCTAACCAGAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: RDADVHASLEHPPRARIDTWIFY*SNQNRA
Trigger: TGCACGGTTCTGGTTAGATCAATAGAAAATCCATGT...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGAGTGCTAGTGGAGGATaGGGAATTAACAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICASASGG*GINSCT
Trigger: TGTACAACTGTTAATTCCTCATCCTCCACTAGCACT...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGCCCAGTACATTACATaGTGGGGTTTCAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSAQYIT*WGFRRH
Trigger: GTGTCTCCTGAAACCCCATCATGTAATGTACTGGGC...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTTCTGTTCGGGGTGGCTaGAGCAAACCGTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSSVRGG*SKPFFK
Trigger: TTTGAAGAACGGTTTGCTGCAGCCACCCCGAACAGA...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR GCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCAGAACTAAACACATCTaGACTCGCTGGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSRTKHI*TRWKGL
Trigger: CAGACCCTTCCAGCGAGTGCAGATGTGTTTAGTTCT...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp TATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCACGAGCTCGCATCGATaGTATTTCTTAGGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: YFLGLLICAYRGSGSQTCTSSHR*YFLGLL
Trigger: CAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT...GCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCAGCTTCCTACCATATaGTCCAGAATAACGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLQLPTI*SRITSG
Trigger: TCCAGACGTTATTCTGGAGCATATGGTAGGAAGCTG...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACCAGCTTCCTACCATATaGTCCAGAATAACGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYQLPTI*SRITSG
Trigger: TCCAGACGTTATTCTGGAGCATATGGTAGGAAGCTG...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACTGGCACCTCAGCTCTTaGTTGGAAATTTCACTGTAC +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYWHLSS*LEISLY
Trigger: GTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCA...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GCAAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTACCTCTTTATCAAAGTaGCTTCACTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: ARREKRISKSQDTDAGQTTSLSK*LHCDPD
Trigger: GTCAGGATCGCAGTGAAGCCACTTTGATAAAGAGGT...AGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp TATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCACCTCTTTATCAAAGTaGCTTCACTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: YFLGLLICAYRGSGSQTCTSLSK*LHCDPD
Trigger: GTCAGGATCGCAGTGAAGCCACTTTGATAAAGAGGT...GCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTGTTTGTGTTCTCCTTTaGAACGAGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLVCVLL*NERQQQ
Trigger: TTGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAAC...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCACAGGACAGGTTCAGCCGCCTaGGCTGTTTTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: GFAVSGFFRFLTKWLWHRTGSAA*AVFMAT
Trigger: TGTGGCCATAAAAACAGCCCAGGCGGCTGAACCTGT...CCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATCTGGAGTTGCAGGAGTaGGGGGAGAGGTTATATCAG +
Preference number: 4 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDLELQE*GERLYQ
Trigger: CTGATATAACCTCTCCCCCCACTCCTGCAACTCCAG...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTCCTTCTTTTGGCTGGTaGGAACCTGATAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: DADVHASLEHPPRARIDAPSFGW*EPDKCF
Trigger: AAAACATTTATCAGGTTCCCACCAGCCAAAAGAAGG...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAACTGCCCGGCCACAGTTaGCCAGGGCTGCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQLPGHS*PGLLSG
Trigger: GCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAG...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAAGGGGTGAGGGGACCTTaGAACATGGCAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKEGVRGP*NMAAGK
Trigger: TTTGCCAGCTGCCATGTTCCAAGGTCCCCTCACCCC...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACAGTGGACTTGACCTGGTaGAGTCACTCGTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTVDLTW*SHSCLG
Trigger: TCCCAGGCACGAGTGACTCCACCAGGTCAAGTCCAC...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCCTAGCTACCGGCCTGTaGACTTATATTATCACCACT +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTLATGL*TYIITT
Trigger: AGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAG...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTAGCTACCGGCCTGTaGACTTATATTATCACCACT +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFLATGL*TYIITT
Trigger: AGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGATGGAAATTTGCTCCTaGAGGGGCTGGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSRFCSQWILQVSDKMALMEICS*RGWQPS
Trigger: TGAGGGCTGCCAGCCCCTCCAGGAGCAAATTTCCAT...CAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTCTCCAGAATAACGTCTaGAAAGTGAGCCCCATCCAT +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLLQNNV*KVSPIH
Trigger: ATGGATGGGGCTCACTTTCCAGACGTTATTCTGGAG...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACAGTGTTGCACGTAGGGTaGGGACTCTCGTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTVLHVG*GLSWKG
Trigger: GCCTTTCCACGAGAGTCCCCACCCTACGTGCAACAC...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTCCCTTCTCACTTTTCTaGTTCTTCGGACCTTCCACA +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLPFSLF*FFGPST
Trigger: TGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGG...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTCAGGCCAACTCTTATaGTCATTCCACCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTSGQLL*SFHLSH
Trigger: ATGGGAAAGGTGGAATGACCATAAGAGTTGGCCTGA...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCCCCCAGAAAACAAACTaGTCTCAGGCCAACTCTTAT +
Preference number: 4 (lower is better)
Translates to: YFLGLLICAYRGSGSQTCPQKTN*SQANSY
Trigger: ATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGG...GCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCATTTCACTGTACTCCTaGGACAGGATACGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSISLYS*DRIRCF
Trigger: GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAAT...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCATGGTCTTTTGGTATTaGCACCTCAGCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTMVFWY*HLSSCL
Trigger: CAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCAT...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAAGAGCTATGGAGAATaGGGACAGAATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLKSYGE*GQNDRW
Trigger: CCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTT...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGGTTTTCACAGCTACTTaGAGTTCTGTCTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRVFTAT*SSVSVD
Trigger: GTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAAC...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp AAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCCAGCAACAACGCCCTTaGGTTTCATCATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: KKGEADLQIPRYRCRPNFQQQRP*VSSWNL
Trigger: AAGATTCCATGATGAAACTCAAGGGCGTTGTTGCTG...GAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: MLMSMPVLSTHHELASMLSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR TCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTCTCGCTGGAAGGGTCTaGGATGAAGATGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGLAGRV*DEDGIK
Trigger: CTTTATCCCATCTTCATCTCAGACCCTTCCAGCGAG...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTTCCTCCCTTCAGAAATaGCACTCTGAGCTGCACATT +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSSSLQK*HSELHI
Trigger: AATGTGCAGCTCAGAGTGTCATTTCTGAAGGGAGGA...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACACTCGGCCAGGCTCATTaGGGACTCTTCTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTLGQAH*GLFSKR
Trigger: TCTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAG...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCTGTCCATGCCAGTCTTaGGCACCCACCACGAGCTCG +
Preference number: 4 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSCPCQS*APTTSS
Trigger: CGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACA...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCCATTGGGCAATCATaGATTTCTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGSIGQS*ISCGKR
Trigger: CCTCTTCCCACAAGAAATTCATGATTGCCCAATGGA...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTGAAAAGGCATATGGATaGCGATATTGTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFEKAYG*RYCGHR
Trigger: TCTGTGACCACAATATCGTCATCCATATGCCTTTTC...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGACACATCATCCTATGTaGAAAGGCATATGGATGACG +
Preference number: 4 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLTHHPM*KGIWMT
Trigger: CGTCATCCATATGCCTTTTCACATAGGATGATGTGT...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTCAGAATTCTGCCAATaGGAATATGGATGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: DVHASLEHPPRARIDAISSEFCQ*EYGWQL
Trigger: CAACTGCCATCCATATTCTCATTGGCAGAATTCTGA...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGTCAGAACGCAGAAATTaGAATGAACCAAACCCACAG +
Preference number: 4 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLSERRN*NEPNPQ
Trigger: CTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGA...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTAGAACTAAACACATCTaGACTCGCTGGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSRTKHI*TRWKGL
Trigger: CAGACCCTTCCAGCGAGTGCAGATGTGTTTAGTTCT...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCGCACCCATGACCATCTaGTGTTGGACGAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPAPMTI*CWTRGC
Trigger: GCAGCCCCTCGTCCAACAGCAGATGGTCATGGGTGC...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTGCGGCTGGCGGAAACTaGCCGGCCACAGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNIAAGGN*PATVGQ
Trigger: CTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCGC...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCACGAGCTCGCATCGATaGTATTTCTTAGGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGTSSHR*YFLGLL
Trigger: CAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR GCA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCGCTGCCATAGATATCTaGCATTGGTTGCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTAAIDI*HWLPKM
Trigger: CATTTTTGGCAACCAATGGCAGATATCTATGGCAGC...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCCTTTCTTCACCAGGATaGAGAATAGCTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRLSSPG*RIAKGL
Trigger: CAGTCCTTTAGCTATTCTGCATCCTGGTGAAGAAAG...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTCTTTCTTCACCAGGATaGAGAATAGCTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: DVHASLEHPPRARIDAISLSSPG*RIAKGL
Trigger: CAGTCCTTTAGCTATTCTGCATCCTGGTGAAGAAAG...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTGGCACCTCAGCTCTTaGTTGGAAATTTCACTGTAC +
Preference number: 4 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGWHLSS*LEISLY
Trigger: GTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCA...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCACCTCTTTATCAAAGTaGCTTCACTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSTSLSK*LHCDPD
Trigger: GTCAGGATCGCAGTGAAGCCACTTTGATAAAGAGGT...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GCCCTCACCCTCAGAAATAATCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGAGTTTGTGTTCTCCTTTaGAACGAGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: ALTLRNNLGLSPGFAVSGVCVLL*NERQQQ
Trigger: TTGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAAC...TCCACTGACTGCAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGGTGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCCCTGGGCTGTTTTTATaGCCACAAATCTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGPGLFL*PQICDS
Trigger: GGAATCACAGATTTGTGGCCATAAAAACAGCCCAGG...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTGGGCATGAAGGCGGCTaGCGGAAACTGCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNIGHEGG*RKLPGH
Trigger: GTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCC...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTTTGGAACATGGCAGCTaGCAAAGGCATAACAGTTTG +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLLEHGS*QRHNSL
Trigger: CAAACTGTTATGCCTTTGCCAGCTGCCATGTTCCAA...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTGGGGTCAAATTCAACTaGGAGATGTCAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: DVHASLEHPPRARIDAISGVKFN*EMSKSS
Trigger: TGATGACTTTGACATCTCCCAGTTGAATTTGACCCC...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCGCGTACAGAGGCTCTaGCTCCCAGACCTGCGCTAT +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPRVQRL*LPDLRY
Trigger: ATAGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCG...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCCTGAGCGAGTTCCATTaGGCAATCATGAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRLSEFH*AIMNFL
Trigger: CAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp ACCAGAACCGTGCAGACTCCCCATGGTCTTTTGGTATaGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTA +
Preference number: 4 (lower is better)
Translates to: TRTVQTPHGLLV*APQLLLGNFTV
Trigger: TACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCACGGTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp GATCTAACCAGAACCGTGCAGACTCCCCATGGTCTTTaGGTATTGGCACCTCAGCTCTTGCTTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: DLTRTVQTPHGL*VLAPQLLLGNF
Trigger: GAAATTTCCAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGTCTGCACGGTTCTGGTTAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTGTTTTCACAGCTACTTaGAGTTCTGTCTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: RREKRISKSQDTDAGQTSVFTAT*SSVSVD
Trigger: GTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAAC...AGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAAGTTGGCCAGGGCTGCTaGGTGGCAGGAAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQVGQGC*VAGKRP
Trigger: GGGTCTCTTTCCTGCCACTCAGCAGCCCTGGCCAAC...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAAGGCATGGGATGCAGATaGTTTGGATGGAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKEGMGCR*FGWRAL
Trigger: CAGAGCTCTCCATCCAAATCATCTGCATCCCATGCC...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTGAAAAGGCATATGGATaGCGATATTGTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLEKAYG*RYCGHR
Trigger: TCTGTGACCACAATATCGTCATCCATATGCCTTTTC...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAATGAAGGTTCGTACTaGAAGCTGTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLNEGSY*KLSFFT
Trigger: GGTGAAGAAAGACAGCTTTCAGTACGAACCTTCATT...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCCTCATCAATGGGATCTaGTGTCTTTTCCTACTCACA +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGLINGI*CLFLLT
Trigger: TGTGAGTAGGAAAAGACATCAGATCCCATTGATGAG...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACATCTTCCCGTTCATGTaGAAGGGTTACCTAATCATA +
Preference number: 4 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYIFPFM*KGYLII
Trigger: TATGATTAGGTAACCCTTTCACATGAACGGGAAGAT...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATGCGGCATGTAAAGATTaGAGAGCTATGGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: SFSCVARRVGTLVERLDDAACKD*RAMENG
Trigger: CCCATTCTCCATAGCTCTTCAATCTTTACATGCCGC...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATCTTGCTCTTCGCTTTTaGTGGGACTTTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDLALRF*WDFQSP
Trigger: AGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAG...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTATATCTGCCATTGGTTaGCAAAAATGCTTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFISAIG*QKCLVP
Trigger: GGGAACTAAGCATTTTTGGCAACCAATGGCAGATAT...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTCACAGAAGACCCTTTaGTTTTGCTTAAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: APTTSSHRCYFLGLLICASQKTL*FCLKKS
Trigger: TGACTTCTTTAAGCAAAAGCAAAGGGTCTTCTGTGA...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATGGGACAGGATACGGTaGTTCCAGGCTCACCAAACA +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPWDRIR*FQAHQT
Trigger: TGTTTGGTGAGCCTGGAAGCACCGTATCCTGTCCCA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTTTGTTTAAAAGAAGGTaGCCAGTACATTACATGATG +
Preference number: 4 (lower is better)
Translates to: FLGLLICAYRGSGSQTCALFKRR*PVHYMM
Trigger: CATCATGTAATGTACTGGGCACCTTCTTTTAAACAA...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATGCTCTTCGCTTTTGCTaGGACTTTCAAAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SFSCVARRVGTLVERLDDALRFC*DFQSPL
Trigger: AAGAGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGC...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCACTGGGCTCCCCACTaGGCTCACCAAATGGATCAC +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPHWAPH*AHQMDH
Trigger: GTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTG...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCCTGAGCGAGTTCCATTaGGCAATCATGAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLLSEFH*AIMNFL
Trigger: CAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTTTTGAAAATGGCACGTaGAGAAGACACTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLFENGT*RRHLSA
Trigger: TGCAGACAAGTGTCTTCTCCACGTGCCATTTTCAAA...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTATGGTCTTTTGGTATTaGCACCTCAGCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSMVFWY*HLSSCL
Trigger: CAAGCAAGAGCTGAGGTGCCAATACCAAAAGACCAT...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGACAGAATGACAGGTaGTGTTTCCCTGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSGQNDR*CFPGFK
Trigger: TTTGAAACCAGGGAAACACCACCTGTCATTCTGTCC...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATGGTTTCAGGAGACACTaGGATGAGTACGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: SFSCVARRVGTLVERLDDGFRRH*DEYELS
Trigger: TGATAGCTCGTACTCATCCCAGTGTCTCCTGAAACC...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTCACCCTCAGAAATAATCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCATGGCCACAAATCTGTaGTTCCCTTCCTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: LTLRNNLGLSPGFAVSGFMATNL*FPSFPQ
Trigger: TTGTGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...GAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCCTTAGTTCCCTCTTCTaGGCGAGTTCCATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLLSSLF*ASSIGQ
Trigger: TTGCCCAATGGAACTCGCTCAGAAGAGGGAACTAAG...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATATAACGTCTGGAAAGTaGGCCCCATCCATCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDITSGK*APSIKF
Trigger: AAACTTGATGGATGGGGCTCACTTTCCAGACGTTAT...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTCGTGGAAAGGCTAGATaGTGGAGTCACGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIRGKAR*WSHVLP
Trigger: AGGGAGCACGTGACTCCATCATCTAGCCTTTCCACG...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTATTGGTATAATGGTGTaGTACTGCAAGACAAACTCA +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFIGIMV*YCKTNS
Trigger: TGAGTTTGTCTTGCAGTATCACACCATTATACCAAT...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCACATGGATTTTCTATTaGTCTAACCAGAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSTWIFY*SNQNRA
Trigger: TGCACGGTTCTGGTTAGATCAATAGAAAATCCATGT...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAGCCCAGTACATTACATaGTGGGGTTTCAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPAQYIT*WGFRRH
Trigger: GTGTCTCCTGAAACCCCATCATGTAATGTACTGGGC...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp GGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCACAGGTCTCTCTCCAGGTTTTaGAGTCAGTGGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GFAVSGFFRFLTKWLWHRSLSRF*SQWILQ
Trigger: CTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGA...CCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR GCA 90 bp CTCACCCTCAGAAATAATCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCGTTTTTATGGAAATTTaGTCCTGGAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LTLRNNLGLSPGFAVSGFVFMEI*SWRGWQ
Trigger: CTGCCAGCCCCTCCAGGAGCAAATTTCCATAAAAAC...GAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFSLSWR*FSQLLE
Trigger: TTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACT...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CTCACCCTCAGAAATAATCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCCAATCCCGATCAATTTaGCTTTGTACCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: LTLRNNLGLSPGFAVSGFQSRSI*LCTGPL
Trigger: AAGGGGTCCGGTACAAAGCCAAATTGATCGGGATTG...GAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp GGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCACAGGCCTGGGCTGTTTTTATaGCCACAAATCTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: GFAVSGFFRFLTKWLWHRPGLFL*PQICDS
Trigger: GGAATCACAGATTTGTGGCCATAAAAACAGCCCAGG...CCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATCCTGGGCTGTTTTTATaGCCACAAATCTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: SFSCVARRVGTLVERLDDPGLFL*PQICDS
Trigger: GGAATCACAGATTTGTGGCCATAAAAACAGCCCAGG...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTCAAATGGATCACTGTTaGATGAGGCCTGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGQMDHC*MRPVIH
Trigger: ATGGATCACAGGCCTCATCCAACAGTGATCCATTTG...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCTGACAAAATGGCTCTaGCACAGGTCTAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SPGFAVSGFFRFLTKWLWLTKWL*HRSSHS
Trigger: AGAGTGACTAGACCTGTGCCAGAGCCATTTTGTCAG...CCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCCCAAAAAGTTCTAATTaGGTCACAGCACTTACAGGT +
Preference number: 4 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGPKSSN*VTALTG
Trigger: ACCTGTAAGTGCTGTGACCCAATTAGAACTTTTTGG...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTCCCCAGAAAACAAACTaGTCTCAGGCCAACTCTTAT +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGPQKTN*SQANSY
Trigger: ATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGG...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCCTGCCAATGAGAATATaGATGGCAGTTGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: STHHELASMLFLRSVDLRLPMRI*MAVEKL
Trigger: AAGTTTTTCAACTGCCATCCATATTCTCATTGGCAG...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTACCTCAGCTCTTGCTTaGAAATTTCACTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSTSALA*KFHCTP
Trigger: AGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGT...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTGGCTGGGGTTGGAGGTaGGTTGGTCGATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNIGWGWR*VGRWCG
Trigger: ACCACACCATCGACCAACTCACCTCCAACCCCAGCC...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTGGCATGGGATGCAGATaGTTTGGATGGAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIGMGCR*FGWRAL
Trigger: CAGAGCTCTCCATCCAAATCATCTGCATCCCATGCC...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAATCCTCCCTTCAGAAATaGCACTCTGAGCTGCACATT +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKESSLQK*HSELHI
Trigger: AATGTGCAGCTCAGAGTGTCATTTCTGAAGGGAGGA...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGGATTCTTCAGGTTTCTaGCAAAATGGCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: GLSPGFAVSGFFRFLTKWDSSGF*QNGSGT
Trigger: TGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATC...CCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCCTTAGTTCCCTCTTCTaGGCGAGTTCCATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESLSSLF*ASSIGQ
Trigger: TTGCCCAATGGAACTCGCTCAGAAGAGGGAACTAAG...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTTTCCTACTCACAGAATaGAGGTTCGTACTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGFLLTE*RFVLKA
Trigger: AGCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAA...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACAAGCCAGAGTTCACTTTaGATGTGTCAGAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTSQSSL*MCQKQP
Trigger: GGGTTGCTTCTGACACATTCAAAGTGAACTCTGGCT...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCTTCAATCATGTTCAATaGAAGAGGACAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSFNHVQ*KRTILL
Trigger: CAGGAGAATTGTCCTCTTTCATTGAACATGATTGAA...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCACTTGCTCTTCGCTTTTaGTGGGACTTTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPLALRF*WDFQSP
Trigger: AGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAG...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCTTAGGTCTGTTGATCTaGGCGTACAGAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPLGLLI*AYRGSG
Trigger: GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAA...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTTCAACATACTGTAACTaGATAGGAACATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LMSMPVLSTHHELASMLFSTYCN*IGTSGK
Trigger: TTTTCCTGATGTTCCTATGCAGTTACAGTATGTTGA...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCACAGGAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: GFAVSGFFRFLTKWLWHRSLSWR*FSQLLE
Trigger: TTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACT...CCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp GGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGTTCTGGAGTCTTTCTTaGCGCTGGTTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: GLSPGFAVSGFFRFLTKWFWSLS*RWFSQL
Trigger: TAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGAA...CCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCGGAGGCTGGGCCATCTaGAAATCCTTAAACGTTTCT +
Preference number: 4 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLGGWAI*KSLNVS
Trigger: AGAAACGTTTAAGGATTTCCAGATGGCCCAGCCTCC...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGAGGTTTCTGACAAAATaGCTCTGGCACAGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: GLSPGFAVSGFFRFLTKWRFLTK*LWHRSS
Trigger: ACTAGACCTGTGCCAGAGCCATTTTGTCAGAAACCT...CCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTCCAAAAAGTTCTAATTaGGTCACAGCACTTACAGGT +
Preference number: 4 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSPKSSN*VTALTG
Trigger: ACCTGTAAGTGCTGTGACCCAATTAGAACTTTTTGG...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCATCATGAATTTCTTGTaGGAAGAGGTGAAAGAATAC +
Preference number: 4 (lower is better)
Translates to: YFLGLLICAYRGSGSQTCIMNFL*EEVKEY
Trigger: GTATTCTTTCACCTCTTCCCACAAGAAATTCATGAT...GCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGATAGATATCTGCCATTaGTTGCCAAAAATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SMPVLSTHHELASMLFLRIDICH*LPKMLS
Trigger: ACTAAGCATTTTTGGCAACCAATGGCAGATATCTAT...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTCTGTCACTCCAAATTTaGTGTCTCAACAGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGLSLQI*CLNSGQ
Trigger: TTGACCACTGTTGAGACACCAAATTTGGAGTGACAG...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCAGCAACCCAAAGAATTaGTATAATGGTGTGATACTG +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSSNPKN*YNGVIL
Trigger: CAGTATCACACCATTATACCAATTCTTTGGGTTGCT...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCTGCCAATGAGAATATaGATGGCAGTTGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSLPMRI*MAVEKL
Trigger: AAGTTTTTCAACTGCCATCCATATTCTCATTGGCAG...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCAAGAGCTATGGAGAATaGGGACAGAATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLKSYGE*GQNDRW
Trigger: CCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTT...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAGGTTTCAGGAGACACTaGGATGAGTACGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPGFRRH*DEYELS
Trigger: TGATAGCTCGTACTCATCCCAGTGTCTCCTGAAACC...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp TGGAAAGTGAGCCCCATCCATCAAGTTTGTCACACCTaGCACTCAATCTGCTACCTTCTCTACAGTGTAATG +
Preference number: 4 (lower is better)
Translates to: WKVSPIHQVCHT*HSICYLLYSVM
Trigger: CATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAAACTTGATGGATGGGGCTCACTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAACAGCAACAACGCCCTTaGGTTTCATCATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKEQQQRP*VSSWNL
Trigger: AAGATTCCATGATGAAACTCAAGGGCGTTGTTGCTG...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGTCAGAAATGACACTCTaGGCTGCACATTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: GLSPGFAVSGFFRFLTKWSEMTL*AAHFIH
Trigger: GTGAATGAAATGTGCAGCTCAGAGTGTCATTTCTGA...CCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR TCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACAGTACAAACAGTCCAGTaGTTTATATCGGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTVQTVQ*FISGVG
Trigger: ACCTACCCCCGATATAAATCACTGGACTGTTTGTAC...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCGTACAAACAGTCCAGTaGTTTATATCGGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLVQTVQ*FISGVG
Trigger: ACCTACCCCCGATATAAATCACTGGACTGTTTGTAC...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCAAGACCCTTTGCTTTTaGTTAAAGAAGTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFKTLCF*LKKSVP
Trigger: TGGAACTGACTTCTTTAAGCAAAAGCAAAGGGTCTT...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTTCAACATACTGTAACTaGATAGGAACATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLSTYCN*IGTSGK
Trigger: TTTTCCTGATGTTCCTATGCAGTTACAGTATGTTGA...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAACCTCTTTATCAAAGTaGCTTCACTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPTSLSK*LHCDPD
Trigger: GTCAGGATCGCAGTGAAGCCACTTTGATAAAGAGGT...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTTCTTCCAATATTGTCTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGSSNIV*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGACAATATTGGAAGA...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TCAATGAAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAATTAACTTTCGGGATCACGGATTaGCTCGTGTCCAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SMKEDNSPGLSPSARKLTFGITD*LVSSLK
Trigger: TTTGAGGCTGGACACGAGCCAATCCGTGATCCCGAA...AGTTAATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTCCTTCTTTTGGCTGGTaGGAACCTGATAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGPSFGW*EPDKCF
Trigger: AAAACATTTATCAGGTTCCCACCAGCCAAAAGAAGG...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CTCACCCTCAGAAATAATCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCAGGTTTTGCAGTCAGTaGATTCTTCAGGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LTLRNNLGLSPGFAVSGFRFCSQ*ILQVSD
Trigger: GTCAGAAACCTGAAGAATCCACTGACTGCAAAACCT...GAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTATAGATATCTGCCATTaGTTGCCAAAAATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: MSMPVLSTHHELASMLFLIDICH*LPKMLS
Trigger: ACTAAGCATTTTTGGCAACCAATGGCAGATATCTAT...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAATCACTAGCTGCTGATTaGCCAACTGCTCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQSLAAD*PTAPAS
Trigger: GCTGGCAGGAGCAGTTGGCCAATCAGCAGCTAGTGA...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATCAGGCCAACTCTTATaGTCATTCCACCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPSGQLL*SFHLSH
Trigger: ATGGGAAAGGTGGAATGACCATAAGAGTTGGCCTGA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTTTAAGCAATTTCCCATaGGAACTGCCTATCTTACCA +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGLSNFP*ELPILP
Trigger: TGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAA...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp CTTCTGAGCGAGTTCCATTGGGCAATCATGAATTTCTaGTGGGAAGAGGTGAAAGAATACAAGAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLSEFHWAIMNF*WEEVKEYKRAC
Trigger: ACAGGCTCTCTTGTATTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCCAGCAACAACGCCCTTaGGTTTCATCATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESQQQRP*VSSWNL
Trigger: AAGATTCCATGATGAAACTCAAGGGCGTTGTTGCTG...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCTGGAAGGGTCTGAGATaGAGATGGGATAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPWKGLR*RWDKGI
Trigger: GATGCCTTTATCCCATCTTCATCTCAGACCCTTCCA...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAATCAGAAATGACACTCTaGGCTGCACATTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKESEMTL*AAHFIH
Trigger: GTGAATGAAATGTGCAGCTCAGAGTGTCATTTCTGA...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATCAGAAATGACACTCTaGGCTGCACATTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPSEMTL*AAHFIH
Trigger: GTGAATGAAATGTGCAGCTCAGAGTGTCATTTCTGA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCACACATCATCCTATGTaGAAAGGCATATGGATGACG +
Preference number: 4 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLTHHPM*KGIWMT
Trigger: CGTCATCCATATGCCTTTTCACATAGGATGATGTGT...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CTGAGCGAGTTCCATTGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAAAGAACTCATCAATGGGATCTaGTGTCTTTTCCTACTCACA +
Preference number: 4 (lower is better)
Translates to: LSEFHWAIMNFLWEEVKELINGI*CLFLLT
Trigger: TGTGAGTAGGAAAAGACATCAGATCCCATTGATGAG...TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTATTGGTATAATGGTGTaGTACTGCAAGACAAACTCA +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGIGIMV*YCKTNS
Trigger: TGAGTTTGTCTTGCAGTATCACACCATTATACCAAT...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACATCAGAATTCTGCCAATaGGAATATGGATGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTSEFCQ*EYGWQL
Trigger: CAACTGCCATCCATATTCTCATTGGCAGAATTCTGA...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGACAGCTTGTTCACACTaGTTATCCTTTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSRFCSQWILQVSDKMALTACSH*LSFCAF
Trigger: AAAGGCACAAAAGGATAAGCAGTGTGAACAAGCTGT...CAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR GCA 90 bp TCAATGAAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAATTAACTTCTTTGCCCATTTTCTaGCTGGGCTTGTCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SMKEDNSPGLSPSARKLTSLPIF*LGLSVC
Trigger: ACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGA...AGTTAATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCACGAGCTCGCATCGATaGTATTTCTTAGGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESTSSHR*YFLGLL
Trigger: CAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTTCACAGAAGACCCTTTaGTTTTGCTTAAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGSQKTL*FCLKKS
Trigger: TGACTTCTTTAAGCAAAAGCAAAGGGTCTTCTGTGA...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACAAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTSLSWR*FSQLLE
Trigger: TTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACT...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCGTTTGTGTTCTCCTTTaGAACGAGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPVCVLL*NERQQQ
Trigger: TTGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAAC...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTGTTTGTGTTCTCCTTTaGAACGAGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIVCVLL*NERQQQ
Trigger: TTGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAAC...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CTCACCCTCAGAAATAATCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTCTTCCAATATTGTCTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: LTLRNNLGLSPGFAVSGFSSNIV*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGACAATATTGGAAGA...GAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCTGGATGACGATATTGTaGTCACAGAAGACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESWMTIL*SQKTLC
Trigger: GCAAAGGGTCTTCTGTGACCACAATATCGTCATCCA...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp CAAAAATGCTTAGTTCCCTCTTCTGAGCGAGTTCCATaGGGCAATCATGAATTTCTTGTGGGAAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QKCLVPSSERVP*GNHEFLVGRGE
Trigger: TTCACCTCTTCCCACAAGAAATTCATGATTGCCCAATGGAACTCGCTCAGAAGAGGGAACTAAGCATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAATCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SWSLSRFCSQWILQVSDKSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...TTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR GCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTCTTGTCTCCCCGAGCTaGGGAAACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNILVSPS*GNFINP
Trigger: GGGATTGATGAAGTTTCCGCAGCTCGGGGAGACAAG...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCGCTGCCATAGATATCTaGCATTGGTTGCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESAAIDI*HWLPKM
Trigger: CATTTTTGGCAACCAATGGCAGATATCTATGGCAGC...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTTTGTTTAAAAGAAGGTaGCCAGTACATTACATGATG +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGLFKRR*PVHYMM
Trigger: CATCATGTAATGTACTGGGCACCTTCTTTTAAACAA...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTCAAATGGATCACTGTTaGATGAGGCCTGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIQMDHC*MRPVIH
Trigger: ATGGATCACAGGCCTCATCCAACAGTGATCCATTTG...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGGTTTCAGAAATTACCTaGTACACAGGATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SPGFAVSGFFRFLTKWLWVSEIT*YTGSST
Trigger: TGTTGAAGATCCTGTGTACCAGGTAATTTCTGAAAC...CCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CCA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTATCATGAATTTCTTGTaGGAAGAGGTGAAAGAATAC +
Preference number: 4 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGIMNFL*EEVKEY
Trigger: GTATTCTTTCACCTCTTCCCACAAGAAATTCATGAT...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp GATGACGATATTGTGGTCACAGAAGACCCTTTGCTTTaGCTTAAAGAAGTCAGTTCCAACCCTGTTGTAATC +
Preference number: 4 (lower is better)
Translates to: DDDIVVTEDPLL*LKEVSSNPVVI
Trigger: GATTACAACAGGGTTGGAACTGACTTCTTTAAGCAAAAGCAAAGGGTCTTCTGTGACCACAATATCGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCGTTTTCACAGCTACTTaGAGTTCTGTCTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSVFTAT*SSVSVD
Trigger: GTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAAC...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCAATGAAGGTTCGTACTaGAAGCTGTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPNEGSY*KLSFFT
Trigger: GGTGAAGAAAGACAGCTTTCAGTACGAACCTTCATT...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCTTCCTACTCACAGAATaGAGGTTCGTACTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPFLLTE*RFVLKA
Trigger: AGCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAA...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTCTTCCTTCTTTTGGCTaGTGGGAACCTGATAAATGT +
Preference number: 4 (lower is better)
Translates to: LSHLALNLLPSLQCNGIILPSFG*WEPDKC
Trigger: ACATTTATCAGGTTCCCACCAGCCAAAAGAAGGAAG...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCTTCCTTCTTTTGGCTaGTGGGAACCTGATAAATGT +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPLPSFG*WEPDKC
Trigger: ACATTTATCAGGTTCCCACCAGCCAAAAGAAGGAAG...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCTTGGTGTCTCAACAGTaGTCAACAGGTAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESLVSQQ*STGREI
Trigger: TATTTCTCTACCTGTTGACCACTGTTGAGACACCAA...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAACTCCAGAATAACGTCTaGAAAGTGAGCCCCATCCAT +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQLQNNV*KVSPIH
Trigger: ATGGATGGGGCTCACTTTCCAGACGTTATTCTGGAG...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAACCTGTTGTAATCCTCTaGTGCCTGTCACTCCAAATT +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQPVVIL*CLSLQI
Trigger: AATTTGGAGTGACAGGCATCAGAGGATTACAACAGG...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAAATGACTTTTCTTTaGAAATGGCACGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPQMTFL*KWHVEK
Trigger: CTTCTCCACGTGCCATTTTCAAAGAAAAGTCATTTG...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR GCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCATATCTGCCATTGGTTaGCAAAAATGCTTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPISAIG*QKCLVP
Trigger: GGGAACTAAGCATTTTTGGCAACCAATGGCAGATAT...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTGGAGGCTGGGCCATCTaGAAATCCTTAAACGTTTCT +
Preference number: 4 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNIGGWAI*KSLNVS
Trigger: AGAAACGTTTAAGGATTTCCAGATGGCCCAGCCTCC...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCTTAAGCAATTTCCCATaGGAACTGCCTATCTTACCA +
Preference number: 4 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSLSNFP*ELPILP
Trigger: TGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAA...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TCAATGAAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAATTAACTTCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SMKEDNSPGLSPSARKLTSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...AGTTAATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TCAATGAAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAATTAACTATCTTCCCGTTCATGTaGAAGGGTTACCTAATCATA +
Preference number: 4 (lower is better)
Translates to: SMKEDNSPGLSPSARKLTIFPFM*KGYLII
Trigger: TATGATTAGGTAACCCTTTCACATGAACGGGAAGAT...AGTTAATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCTTCAATCATGTTCAATaGAAGAGGACAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSFNHVQ*KRTILL
Trigger: CAGGAGAATTGTCCTCTTTCATTGAACATGATTGAA...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTCTAGCTACCGGCCTGTaGACTTATATTATCACCACT +
Preference number: 4 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNILATGL*TYIITT
Trigger: AGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAG...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CAACAAAGCAATTTAAGCAATTTCCCATGGGAACTGCCTATCTTACCAAATCCCAGCAACCCAAAGAATTaGTATAATGGTGTGATACTG +
Preference number: 4 (lower is better)
Translates to: QQSNLSNFPWELPILPNPSNPKN*YNGVIL
Trigger: CAGTATCACACCATTATACCAATTCTTTGGGTTGCT...GGGATTTGGTAAGATAGGCAGTTCCCATGGGAAATTGCTTAAATTGCTTTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTAGTGCTAGTGGAGGATaGGGAATTAACAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNISASGG*GINSCT
Trigger: TGTACAACTGTTAATTCCTCATCCTCCACTAGCACT...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAATCTTCCAATATTGTCTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQSSNIV*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGACAATATTGGAAGA...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAATTGGTGTCTCAACAGTaGTCAACAGGTAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQLVSQQ*STGREI
Trigger: TATTTCTCTACCTGTTGACCACTGTTGAGACACCAA...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR TCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAAAATAATTTTGCACACTaGGTCATCTTAAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQNNFAH*VILNPA
Trigger: AGCTGGGTTTAAGATGACTCAGTGTGCAAAATTATT...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CCA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAATCAAACACAATGTACTaGTACACAGGATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQSNTMY*YTGSST
Trigger: TGTTGAAGATCCTGTGTACCAGTACATTGTGTTTGA...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
3UTR CAA 72 bp TATGAGGGCTCAAATATTTGTTGGGTAAGCATTTGCTaGATTTCTGATTTAATGTTGGGTGGATCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: YEGSNICWVSIC*ISDLMLGGSFY
Trigger: ATAGAAAGATCCACCCAACATTAAATCAGAAATCAAGCAAATGCTTACCCAACAAATATTTGAGCCCTCATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS GCA 90 bp TCACTCTTTTTGAGTGCTCGCCTAGCCCAGAGCATCCTCCTCCGCTaGCGCAGCCGCCCAGGAAGCGGCTCCCCATGCCCGGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: SLFLSARLAQSILLR*RSRPGSGSPCPAGG
Trigger: GCCGCCCGCCGGGCATGGGGAGCCGCTTCCTGGGCGGCTGCGGCAGCGGAGGAGGATGCTCTGGGCTAGGCGAGCACTCAAAAAGAGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371230.1
ENST00000371236.7
CDS CCA 90 bp CGGCTGGCGGAAACTGCCCGGCCACAGTTGGCCAGGGCTGCTGAGTaGCAGGAAAGAGACCCGGCTGGCCCCATGCGATGGGCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: RLAETARPQLARAAE*QERDPAGPMRWAEP
Trigger: GGGCTCAGCCCATCGCATGGGGCCAGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 90 bp AGGGCTGCTGAGTGGCAGGAAAGAGACCCGGCTGGCCCCATGCGATaGGCTGAGCCCCCGGCATCACCTGAGCGACTGGTGGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: RAAEWQERDPAGPMR*AEPPASPERLVAGH
Trigger: GTGCCCAGCCACCAGTCGCTCAGGTGATGCCGGGGGCTCAGCCCATCGCATGGGGCCAGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 90 bp TTGTGTGGGCATGAAGGCGGCTGGCGGAAACTGCCCGGCCACAGTTaGCCAGGGCTGCTGAGTGGCAGGAAAGAGACCCGGCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: LCGHEGGWRKLPGHS*PGLLSGRKETRLAP
Trigger: TGGGGCCAGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCCACACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 90 bp GGCAGCTGGCAAAGGCATAACAGTTTGTGTGGGCATGAAGGCGGCTaGCGGAAACTGCCCGGCCACAGTTGGCCAGGGCTGCTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GSWQRHNSLCGHEGG*RKLPGHSWPGLLSG
Trigger: GCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCCACACAAACTGTTATGCCTTTGCCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTAGAGGGCTGGTCGGGTTaGCGGGAGGGCACGGGCGGA +
Preference number: 5 (lower is better)
Translates to: MLMSMPVLSTHHELASMLEGWSG*REGTGG
Trigger: TCCGCCCGTGCCCTCCCGCAAACCCGACCAGCCCTC...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGGGGGGTGAGGGGACCTaGGAACATGGCAGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: VVMLMSMPVLSTHHELASGGEGT*EHGSWQ
Trigger: TTGCCAGCTGCCATGTTCCAAGGTCCCCTCACCCCC...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTGAGGGCTGGTCGGGTTaGCGGGAGGGCACGGGCGGA +
Preference number: 5 (lower is better)
Translates to: MSMPVLSTHHELASMLFLEGWSG*REGTGG
Trigger: TCCGCCCGTGCCCTCCCGCAAACCCGACCAGCCCTC...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCGAGGGCTGGTCGGGTTaGCGGGAGGGCACGGGCGGA +
Preference number: 5 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSEGWSG*REGTGG
Trigger: TCCGCCCGTGCCCTCCCGCAAACCCGACCAGCCCTC...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS TCA 90 bp ATCCTGTGCCACCCCGACTTTGTTGAAGTAACTGGAGAAGGCCTCTaGGGTACAGGTGAGGGAGGGCTGGTCGGGTTTGCGGGAGGGCAC +
Preference number: 5 (lower is better)
Translates to: ILCHPDFVEVTGEGL*GTGEGGLVGFAGGH
Trigger: GTGCCCTCCCGCAAACCCGACCAGCCCTCCCTCACCTGTACCTCAGAGGCCTTCTCCAGTTACTTCAACAAAGTCGGGGTGGCACAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTCATGACCATCTGCTGTaGGACGAGGGGCTGCTGACC +
Preference number: 5 (lower is better)
Translates to: FLGLLICAYRGSGSQTCAHDHLL*DEGLLT
Trigger: GGTCAGCAGCCCCTCGTCCAACAGCAGATGGTCATG...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS CCA 90 bp CAGAGGCTCTGGCTCCCAGACCTGCGCTATCTAGCTACCGGCCTGTaGACTTATATTATCACCACTGGGCTCCCCACTGGGCTCACCAAA +
Preference number: 5 (lower is better)
Translates to: QRLWLPDLRYLATGL*TYIITTGLPTGLTK
Trigger: TTTGGTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAGATAGCGCAGGTCTGGGAGCCAGAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCATGACCATCTGCTGTaGGACGAGGGGCTGCTGACC +
Preference number: 5 (lower is better)
Translates to: APTTSSHRCYFLGLLICAHDHLL*DEGLLT
Trigger: GGTCAGCAGCCCCTCGTCCAACAGCAGATGGTCATG...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTTGTCGGTCTGTGGACTaGACCTGGTGGAGTCACTCG +
Preference number: 5 (lower is better)
Translates to: FLGLLICAYRGSGSQTCACRSVD*TWWSHS
Trigger: CGAGTGACTCCACCAGGTCAAGTCCACAGACCGACA...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATGTCCATGCCAGTCTaGAGCACCCACCACGAGCTC +
Preference number: 5 (lower is better)
Translates to: DADVHASLEHPPRARIDAMSMPV*STHHEL
Trigger: GAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTTTTCGGGATCACGGATaGGCTCGTGTCCAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: DADVHASLEHPPRARIDAFRDHG*ARVQPQ
Trigger: TTGAGGCTGGACACGAGCCAATCCGTGATCCCGAAA...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCGGGGGTGAGGGGACCTaGGAACATGGCAGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGGGEGT*EHGSWQ
Trigger: TTGCCAGCTGCCATGTTCCAAGGTCCCCTCACCCCC...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATGTCGGTCTGTGGACTaGACCTGGTGGAGTCACTCG +
Preference number: 5 (lower is better)
Translates to: MLMSMPVLSTHHELASMLCRSVD*TWWSHS
Trigger: CGAGTGACTCCACCAGGTCAAGTCCACAGACCGACA...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTGTCGGTCTGTGGACTaGACCTGGTGGAGTCACTCG +
Preference number: 5 (lower is better)
Translates to: DVHASLEHPPRARIDAISCRSVD*TWWSHS
Trigger: CGAGTGACTCCACCAGGTCAAGTCCACAGACCGACA...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTTCTGCCTGGGCTaGTCGGTCTGTGGACTTGAC +
Preference number: 5 (lower is better)
Translates to: DADVHASLEHPPRARIDAIFCLG*SVCGLD
Trigger: GTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAAT...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTATGTCCATGCCAGTCTaGAGCACCCACCACGAGCTC +
Preference number: 5 (lower is better)
Translates to: LMSMPVLSTHHELASMLFMSMPV*STHHEL
Trigger: GAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS TCA 90 bp GTAGCAAAGGTGAGCTTGTGTAGGCTTCAAGTGGAGGTTGAGGCCTaGGGCCCAAACAACTCGCTTTCTCCACTCCACACTCACCTCCCA +
Preference number: 5 (lower is better)
Translates to: VAKVSLCRLQVEVEA*GPNNSLSPLHTHLP
Trigger: TGGGAGGTGAGTGTGGAGTGGAGAAAGCGAGTTGTTTGGGCCTCAGGCCTCAACCTCCACTTGAAGCCTACACAAGCTCACCTTTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS CCA 90 bp CCTGCGCTATCTAGCTACCGGCCTGTGGACTTATATTATCACCACTaGGCTCCCCACTGGGCTCACCAAATGGATCACTGTTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: PALSSYRPVDLYYHH*APHWAHQMDHCWMR
Trigger: CCTCATCCAACAGTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAGATAGCGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTTCAATCCCGATCAATTaGGCTTTGTACCGGACCCCT +
Preference number: 5 (lower is better)
Translates to: FLGLLICAYRGSGSQTCASIPIN*ALYRTP
Trigger: AGGGGTCCGGTACAAAGCCAAATTGATCGGGATTGA...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTTGTTTGTGTTCTCCTTaGGAACGAGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: DADVHASLEHPPRARIDACLCSP*ERAPAT
Trigger: TGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAACA...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCGGAGGACAGCGCCCATaGCAACGTAACCTGAGGGTA +
Preference number: 5 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGGGQRP*QRNLRV
Trigger: TACCCTCAGGTTACGTTGCAATGGGCGCTGTCCTCC...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCGGAGGACAGCGCCCATaGCAACGTAACCTGAGGGTA +
Preference number: 5 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGGGQRP*QRNLRV
Trigger: TACCCTCAGGTTACGTTGCAATGGGCGCTGTCCTCC...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTGGGGTTGGAGGTGAGTaGGTCGATGGTGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: LMSMPVLSTHHELASMLFGVGGE*VDGVVE
Trigger: TTCTACCACACCATCGACCAACTCACCTCCAACCCC...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTGGGGTTGGAGGTGAGTaGGTCGATGGTGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: DVHASLEHPPRARIDAISGVGGE*VDGVVE
Trigger: TTCTACCACACCATCGACCAACTCACCTCCAACCCC...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp AAGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCCCTCGGCCAGGCTCATaGAGGACTCTTCTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: KKGEADLQIPRYRCRPNFPRPGS*RTLLQE
Trigger: CTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAGG...GAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCATGTCCATGCCAGTCTaGAGCACCCACCACGAGCTC +
Preference number: 5 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSMSMPV*STHHEL
Trigger: GAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATTGTCTTTTTCTTGTGTaGCACGTAGGGTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: RDADVHASLEHPPRARIDCLFLV*HVGWGL
Trigger: GAGTCCCCACCCTACGTGCAACACAAGAAAAAGACA...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS GCA 90 bp GGCTGGGCCATCTGGAAATCCTTAAACGTTTCTTTGCCCATTTTCTaGCTGGGCTTGTCGGTCTGTGGACTTGACCTGGTGGAGTCACTC +
Preference number: 5 (lower is better)
Translates to: GWAIWKSLNVSLPIF*LGLSVCGLDLVESL
Trigger: GAGTGACTCCACCAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGATTTCCAGATGGCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 90 bp TATCACCACTGGGCTCCCCACTGGGCTCACCAAATGGATCACTGTTaGATGAGGCCTGTGATCCATCAGGAGCTTCTTGCTCTTCGCTTT +
Preference number: 5 (lower is better)
Translates to: YHHWAPHWAHQMDHC*MRPVIHQELLALRF
Trigger: AAAGCGAAGAGCAAGAAGCTCCTGATGGATCACAGGCCTCATCCAACAGTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTGGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 90 bp AGCTACCGGCCTGTGGACTTATATTATCACCACTGGGCTCCCCACTaGGCTCACCAAATGGATCACTGTTGGATGAGGCCTGTGATCCAT +
Preference number: 5 (lower is better)
Translates to: SYRPVDLYYHHWAPH*AHQMDHCWMRPVIH
Trigger: ATGGATCACAGGCCTCATCCAACAGTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAAGTCCACAGGCCGGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp GAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTGCCGATCAATTTGGCTTaGTACCGGACCCCTTCACCT +
Preference number: 5 (lower is better)
Translates to: EGRSGSPNPKIPMPAKLLPINLA*YRTPSP
Trigger: AGGTGAAGGGGTCCGGTACAAAGCCAAATTGATCGG...CAGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTCCGATCAATTTGGCTTaGTACCGGACCCCTTCACCT +
Preference number: 5 (lower is better)
Translates to: DVHASLEHPPRARIDAISPINLA*YRTPSP
Trigger: AGGTGAAGGGGTCCGGTACAAAGCCAAATTGATCGG...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCCCGATCAATTTGGCTTaGTACCGGACCCCTTCACCT +
Preference number: 5 (lower is better)
Translates to: STHHELASMLFLRSVDLRPINLA*YRTPSP
Trigger: AGGTGAAGGGGTCCGGTACAAAGCCAAATTGATCGG...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATGTTTGTGTTCTCCTTaGGAACGAGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: MLMSMPVLSTHHELASMLCLCSP*ERAPAT
Trigger: TGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAACA...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGAACCTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: VVMLMSMPVLSTHHELASNLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGGTT...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CAA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATCATGACCATCTGCTGTaGGACGAGGGGCTGCTGACC +
Preference number: 5 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDHDHLL*DEGLLT
Trigger: GGTCAGCAGCCCCTCGTCCAACAGCAGATGGTCATG...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTCTTGCTCTTCGCTTTaGCTGGGACTTTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: APTTSSHRCYFLGLLICASCSSL*LGLSKP
Trigger: GGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAGA...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCCATCAGGAGCTTCTaGCTCTTCGCTTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SMPVLSTHHELASMLFLRSIRSF*LFAFAG
Trigger: CCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGA...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTCTCAAGACAGCCATATaGAGGGAGAAGATAGCACCA +
Preference number: 5 (lower is better)
Translates to: FLGLLICAYRGSGSQTCALKTAI*REKIAP
Trigger: TGGTGCTATCTTCTCCCTCAATATGGCTGTCTTGAG...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGTTGGCACCTCAGCTCTaGCTTGGAAATTTCACTGTA +
Preference number: 5 (lower is better)
Translates to: VVMLMSMPVLSTHHELASLAPQL*LGNFTV
Trigger: TACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAA...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTGTTTGTGTTCTCCTTaGGAACGAGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: DVHASLEHPPRARIDAISCLCSP*ERAPAT
Trigger: TGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAACA...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAACACCTTCCTTCTTTaGGCTGGTGGGAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYNTFLL*AGGNLV
Trigger: TACCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTT...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CAA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTAGGGTCACAGCCTTCGTaGCCTCAAAAATCTCATCAA +
Preference number: 5 (lower is better)
Translates to: MLMSMPVLSTHHELASMLGSQPS*PQKSHQ
Trigger: TTGATGAGATTTTTGAGGCAACGAAGGCTGTGACCC...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTTGTCTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: DADVHASLEHPPRARIDACLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGACA...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTTGCTCTTCGCTTTaGCTGGGACTTTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: SMPVLSTHHELASMLFLRSCSSL*LGLSKP
Trigger: GGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAGA...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCCAAATGGATCACTGTaGGATGAGGCCTGTGATCCA +
Preference number: 5 (lower is better)
Translates to: LMSMPVLSTHHELASMLFPNGSL*DEACDP
Trigger: TGGATCACAGGCCTCATCCAACAGTGATCCATTTGG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGCCAAATGGATCACTGTaGGATGAGGCCTGTGATCCA +
Preference number: 5 (lower is better)
Translates to: SMPVLSTHHELASMLFLRPNGSL*DEACDP
Trigger: TGGATCACAGGCCTCATCCAACAGTGATCCATTTGG...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGGAAGACCCTTTGCTTTaGCTTAAAGAAGTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: VVMLMSMPVLSTHHELASEDPLL*LKEVSS
Trigger: GGAACTGACTTCTTTAAGCAAAAGCAAAGGGTCTTC...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCATGGTCTTTTGGTATaGGCACCTCAGCTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: APTTSSHRCYFLGLLICAHGLLV*APQLLL
Trigger: AAGCAAGAGCTGAGGTGCCAATACCAAAAGACCATG...CGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS CCA 90 bp TCAAAGCCCTCTTCAAAGATGTCATCTGTGGTAGGATCACTGGCATaGGATGCAGATGATTTGGATGGAGAGCTCTGTCTAGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SKPSSKMSSVVGSLA*DADDLDGELCLGAG
Trigger: CCCAGCCCCTAGACAGAGCTCTCCATCCAAATCATCTGCATCCCATGCCAGTGATCCTACCACAGATGACATCTTTGAAGAGGGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCAATCCCGATCAATTaGGCTTTGTACCGGACCCCT +
Preference number: 5 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGSIPIN*ALYRTP
Trigger: AGGGGTCCGGTACAAAGCCAAATTGATCGGGATTGA...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCCAGCAACAACGCCCTaGAGTTTCATCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: LMSMPVLSTHHELASMLFPATTP*SFIMES
Trigger: AGATTCCATGATGAAACTCAAGGGCGTTGTTGCTGG...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp ACATTCAGCTCTGGGATCAAACTTTTACAGACTGTGAAGGGGGCCGAGGCAGAGTGTTTGTGTTCTCCTTaGGAACGAGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: TFSSGIKLLQTVKGAEAECLCSP*ERAPAT
Trigger: TGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAACA...CTCTGCCTCGGCCCCCTTCACAGTCTGTAAAAGTTTGATCCCAGAGCTGAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCAACACCTTCCTTCTTTaGGCTGGTGGGAACCTGATA +
Preference number: 5 (lower is better)
Translates to: STHHELASMLFLRSVDLRNTFLL*AGGNLI
Trigger: TATCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTT...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGTCCTTAAACGTTTCTTaGCCCATTTTCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLSLNVS*PIFCLG
Trigger: GCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGA...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCCCAAATGGATCACTGTaGGATGAGGCCTGTGATCCA +
Preference number: 5 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGPNGSL*DEACDP
Trigger: TGGATCACAGGCCTCATCCAACAGTGATCCATTTGG...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCACAGCACTTACAGGTaGACTTTTTGGCACATCATA +
Preference number: 5 (lower is better)
Translates to: VMLMSMPVLSTHHELASMHSTYR*TFWHII
Trigger: TATGATGTGCCAAAAAGTCAACCTGTAAGTGCTGTG...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCTATTTCTTAGGTCTGTaGATCTGCGCGTACAGAGGC +
Preference number: 5 (lower is better)
Translates to: YFLGLLICAYRGSGSQTCYFLGL*ICAYRG
Trigger: GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA...GCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGGATATCTGCCATTGGTaGCCAAAAATGCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: VMLMSMPVLSTHHELASMDICHW*PKMLSS
Trigger: GGAACTAAGCATTTTTGGCAACCAATGGCAGATATC...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCCACCTCAGCTCTTGCTaGGAAATTTCACTGTACTCC +
Preference number: 5 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTHLSSC*EISLYS
Trigger: GGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTG...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTACTCCCCATGGTCTTTaGGTATTGGCACCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSTPHGL*VLAPQL
Trigger: GAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGT...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS TCA 90 bp CCGAAAGGTACAGAACTAAACACATCTGCACTCGCTGGAAGGGTCTaGGATGAAGATGGGATAAAGGCATCACCTGGAGTTGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: PKGTELNTSALAGRV*DEDGIKASPGVAGV
Trigger: CACTCCTGCAACTCCAGGTGATGCCTTTATCCCATCTTCATCTCAGACCCTTCCAGCGAGTGCAGATGTGTTTAGTTCTGTACCTTTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS GCA 90 bp GGCATCTTGGGTTGGCCATGCAGGCTATCAACGAACTCCATTTGCTaGCAAAACACTGAACTGGCTCTTATGTCTGCACAAGCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: GILGWPCRLSTNSIC*QNTELALMSAQAFA
Trigger: TGCAAAGGCTTGTGCAGACATAAGAGCCAGTTCAGTGTTTTGGCAGCAAATGGAGTTCGTTGATAGCCTGCATGGCCAACCCAAGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CCA 90 bp GAGTTGGTCGATGGTGTGGTAGAAGTCACAGGGGTCAAATTCAACTaGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACC +
Preference number: 5 (lower is better)
Translates to: ELVDGVVEVTGVKFN*EMSKSSQSSVSCAT
Trigger: GGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAGTTGAATTTGACCCCTGTGACTTCTACCACACCATCGACCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATCCGATCAATTTGGCTTaGTACCGGACCCCTTCACCT +
Preference number: 5 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDPINLA*YRTPSP
Trigger: AGGTGAAGGGGTCCGGTACAAAGCCAAATTGATCGG...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AACATTCAGCTCTGGGATCAAACTTTTACAGACTGTGAAGGGGGCCGAGGCAGATCAATCCCGATCAATTaGGCTTTGTACCGGACCCCT +
Preference number: 5 (lower is better)
Translates to: NIQLWDQTFTDCEGGRGRSIPIN*ALYRTP
Trigger: AGGGGTCCGGTACAAAGCCAAATTGATCGGGATTGA...TCTGCCTCGGCCCCCTTCACAGTCTGTAAAAGTTTGATCCCAGAGCTGAATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp GTCGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGTTACAGGTTGACTTTTaGGCACATCATAAACACCTT +
Preference number: 5 (lower is better)
Translates to: VVMLMSMPVLSTHHELASLQVDF*AHHKHL
Trigger: AAGGTGTTTATGATGTGCCAAAAAGTCAACCTGTAA...CGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCAGGAGGACAGCGCCCATaGCAACGTAACCTGAGGGTA +
Preference number: 5 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPGGQRP*QRNLRV
Trigger: TACCCTCAGGTTACGTTGCAATGGGCGCTGTCCTCC...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTGGGGGTGAGGGGACCTaGGAACATGGCAGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIGGEGT*EHGSWQ
Trigger: TTGCCAGCTGCCATGTTCCAAGGTCCCCTCACCCCC...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATATTTTCTGCCTGGGCTaGTCGGTCTGTGGACTTGAC +
Preference number: 5 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDIFCLG*SVCGLD
Trigger: GTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAAT...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTTCCTTAAACGTTTCTTaGCCCATTTTCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: MSMPVLSTHHELASMLFLSLNVS*PIFCLG
Trigger: GCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGA...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTATTTCTTAGGTCTGTaGATCTGCGCGTACAGAGGC +
Preference number: 5 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGYFLGL*ICAYRG
Trigger: GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATA...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGATAGAGATGAACCATTaGGACCACAGAATCAGTTTG +
Preference number: 5 (lower is better)
Translates to: VMLMSMPVLSTHHELASMIEMNH*DHRISL
Trigger: CAAACTGATTCTGTGGTCCAAATGGTTCATCTCTAT...CATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCCCCATCCATCAAGTTaGTCACACCTTGCACTCAAT +
Preference number: 5 (lower is better)
Translates to: HRCYFLGLLICAYRGSGSPHPSS*SHLALN
Trigger: ATTGAGTGCAAGGTGTGACAAACTTGATGGATGGGG...GGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTCTCAAGACAGCCATATaGAGGGAGAAGATAGCACCA +
Preference number: 5 (lower is better)
Translates to: MSMPVLSTHHELASMLFLLKTAI*REKIAP
Trigger: TGGTGCTATCTTCTCCCTCAATATGGCTGTCTTGAG...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACTGGGCATCTATCTTCTaGAAGTTCAGAGCCAGTTAC +
Preference number: 5 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYWASIF*KFRASY
Trigger: GTAACTGGCTCTGAACTTCAAGAAGATAGATGCCCA...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCCCACAGAGTAAACATTaGTTTAAAAGAAGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: FLRSVDLRVQRLWLPDLRPQSKH*FKRRCP
Trigger: TGGGCACCTTCTTTTAAACAAATGTTTACTCTGTGG...GCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS GCA 90 bp TCTGGCATCTTGGGTTGGCCATGCAGGCTATCAACGAACTCCATTTaGTGCCAAAACACTGAACTGGCTCTTATGTCTGCACAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SGILGWPCRLSTNSI*CQNTELALMSAQAF
Trigger: AAAGGCTTGTGCAGACATAAGAGCCAGTTCAGTGTTTTGGCAGCAAATGGAGTTCGTTGATAGCCTGCATGGCCAACCCAAGATGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CCA 90 bp GGTGGGAACCTGATAAATGTTTTCTTCCGTTTCGGGATCACGGATTaGCTCGTGTCCAGCCTCAAACACAATGTACTGGTACACAGGATC +
Preference number: 5 (lower is better)
Translates to: GGNLINVFFRFGITD*LVSSLKHNVLVHRI
Trigger: GATCCTGTGTACCAGTACATTGTGTTTGAGGCTGGACACGAGCCAATCCGTGATCCCGAAACGGAAGAAAACATTTATCAGGTTCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000485760.5
CDS-3UTR CAA 90 bp ATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTAGAAGTTCTGTCTCAGTaGACATCCTACTTAATCCTT +
Preference number: 5 (lower is better)
Translates to: MLMSMPVLSTHHELASMLEVLSQ*TSYLIL
Trigger: AAGGATTAAGTAGGATGTCAACTGAGACAGAACTTC...TAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CGTGATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: RDADVHASLEHPPRARIDFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...ATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGCGCTTTACAGGTTGACTTTTaGGCACATCATAAACACCTT +
Preference number: 5 (lower is better)
Translates to: FLGLLICAYRGSGSQTCALQVDF*AHHKHL
Trigger: AAGGTGTTTATGATGTGCCAAAAAGTCAACCTGTAA...AGCGCAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCTCCTTAAACGTTTCTTaGCCCATTTTCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFSLNVS*PIFCLG
Trigger: GCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGA...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AACATTCAGCTCTGGGATCAAACTTTTACAGACTGTGAAGGGGGCCGAGGCAGATTTCATTCACTCTTTTaGAGTGCTCGCCTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: NIQLWDQTFTDCEGGRGRFHSLF*SARLAQ
Trigger: CTGGGCTAGGCGAGCACTCAAAAAGAGTGAATGAAA...TCTGCCTCGGCCCCCTTCACAGTCTGTAAAAGTTTGATCCCAGAGCTGAATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACGAAGACCCTTTGCTTTaGCTTAAAGAAGTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYEDPLL*LKEVSS
Trigger: GGAACTGACTTCTTTAAGCAAAAGCAAAGGGTCTTC...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTATATGGATGACGATATaGTGGTCACAGAAGACCCTT +
Preference number: 5 (lower is better)
Translates to: LMSMPVLSTHHELASMLFIWMTI*WSQKTL
Trigger: AAGGGTCTTCTGTGACCACAATATCGTCATCCATAT...AAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGATATGGATGACGATATaGTGGTCACAGAAGACCCTT +
Preference number: 5 (lower is better)
Translates to: SMPVLSTHHELASMLFLRIWMTI*WSQKTL
Trigger: AAGGGTCTTCTGTGACCACAATATCGTCATCCATAT...CCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCCAAGTTTGTCACACCTaGCACTCAATCTGCTACCTT +
Preference number: 5 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGQVCHT*HSICYL
Trigger: AAGGTAGCAGATTGAGTGCAAGGTGTGACAAACTTG...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATCAGGAAAACACACTaGACCTGTATAACAATTCTC +
Preference number: 5 (lower is better)
Translates to: DADVHASLEHPPRARIDAIRKTH*TCITIL
Trigger: GAGAATTGTTATACAGGTCAAGTGTGTTTTCCTGAT...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GATGCTGATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTACTTTAATGCATCACTaGGGCATCTATCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: DADVHASLEHPPRARIDATLMHH*GIYLLE
Trigger: TTCAAGAAGATAGATGCCCAAGTGATGCATTAAAGT...AGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCTGGAAGTTCTGTCTCAGTaGACATCCTACTTAATCCTT +
Preference number: 5 (lower is better)
Translates to: LFLRSVDLRVQRLWLPDLEVLSQ*TSYLIL
Trigger: AAGGATTAAGTAGGATGTCAACTGAGACAGAACTTC...CAGGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTGAAGTTCTGTCTCAGTaGACATCCTACTTAATCCTT +
Preference number: 5 (lower is better)
Translates to: DVHASLEHPPRARIDAISEVLSQ*TSYLIL
Trigger: AAGGATTAAGTAGGATGTCAACTGAGACAGAACTTC...AGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATCCAGCAACAACGCCCTaGAGTTTCATCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDPATTP*SFIMES
Trigger: AGATTCCATGATGAAACTCAAGGGCGTTGTTGCTGG...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCGCCATTACTTACAGGTaGACTTTTTGGCACATCATA +
Preference number: 5 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTAITYR*TFWHII
Trigger: TATGATGTGCCAAAAAGTCAACCTGTAAGTAATGGC...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420954.6
CDS-3UTR CAA 90 bp AGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTTGTCTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: SSHRCYFLGLLICAYRGSCLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGACA...AGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCTTTCGGGATCACGGATaGGCTCGTGTCCAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESFRDHG*ARVQPQ
Trigger: TTGAGGCTGGACACGAGCCAATCCGTGATCCCGAAA...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATAACACCTTCCTTCTTTaGGCTGGTGGGAACCTGATA +
Preference number: 5 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDNTFLL*AGGNLI
Trigger: TATCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTT...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATCCATCAGGAGCTTCTaGCTCTTCGCTTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPSIRSF*LFAFAG
Trigger: CCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATTTTCATTCACTCTTTTaGAGTGCTCGCCTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SFSCVARRVGTLVERLDDFHSLF*SARLAQ
Trigger: CTGGGCTAGGCGAGCACTCAAAAAGAGTGAATGAAA...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371236.7
CDS-3UTR CAA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTCCTCGGCCAGGCTCATaGAGGACTCTTCTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIPRPGS*RTLLQE
Trigger: CTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAGG...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGCTCTGGCACAGGGTCTCTCTCCAGGTTTaGCAGTCAGTGGATTCTTCA +
Preference number: 5 (lower is better)
Translates to: GFAVSGFFRFLTKWLWHRVSLQV*QSVDSS
Trigger: TGAAGAATCCACTGACTGCAAAACCTGGAGAGAGAC...CCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGCAATCATGAATTTCTaGTGGGAAGAGGTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: STHHELASMLFLRSVDLRAIMNF*WEEVKE
Trigger: TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGC...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTCCTGTCACTCCAAATTaGGTGTCTCAACAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGPVTPN*VSQQWS
Trigger: TGACCACTGTTGAGACACCAAATTTGGAGTGACAGG...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCTTTTTCTTGTGTTGCACGTAGGGTGGGGACTCTCGTGGAAAGGCTAGATGATCAGCCAGAGTTCACTTaGAATGTGTCAGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: SFSCVARRVGTLVERLDDQPEFT*NVSEAT
Trigger: GGTTGCTTCTGACACATTCAAAGTGAACTCTGGCTG...ATCATCTAGCCTTTCCACGAGAGTCCCCACCCTACGTGCAACACAAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATCACCTCAGCTCTTGCTaGGAAATTTCACTGTACTCC +
Preference number: 5 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDHLSSC*EISLYS
Trigger: GGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTG...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS CCA 90 bp CTTCACTGCGATCCTGACCTTTCTTTCTGGAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAAGTTCTGTCTCAGTTGACATCCTAC +
Preference number: 5 (lower is better)
Translates to: LHCDPDLSFWSLSWR*FSQLLEVLSQLTSY
Trigger: GTAGGATGTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGAAAGAAAGGTCAGGATCGCAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS-3UTR CAA 90 bp AAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTGTTAGTTTTTTTCTGGAGTCTTTCTaGGCGCTGGTTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: KRISKSQDTDAGQTSVSFFLESF*ALVFTA
Trigger: AGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGAAA...AAAACTAACAGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp CCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: PTTSSHRCYFLGLLICAYFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...GTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATCTTGCTCTTCGCTTTaGCTGGGACTTTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPSCSSL*LGLSKP
Trigger: GGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAGA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCGCAATCATGAATTTCTaGTGGGAAGAGGTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: ELASMLFLRSVDLRVQRLAIMNF*WEEVKE
Trigger: TTCTTTCACCTCTTCCCACAAGAAATTCATGATTGC...GAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTGCAAATGACTTTTCTTaGAAAATGGCACGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: MSMPVLSTHHELASMLFLANDFS*KMARGE
Trigger: TTCTCCACGTGCCATTTTCAAAGAAAAGTCATTTGC...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCACCACATTACCAGAATaGTACCAGAATTATTTGGCA +
Preference number: 5 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTTTLPE*YQNYLA
Trigger: TGCCAAATAATTCTGGTACAATTCTGGTAATGTGGT...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCTCCCAGACCATCAGGAAAACACACTaGACCTGTATAACAATTCTC +
Preference number: 5 (lower is better)
Translates to: CYFLGLLICAYRGSGSQTIRKTH*TCITIL
Trigger: GAGAATTGTTATACAGGTCAAGTGTGTTTTCCTGAT...GGTCTGGGAGCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp GTATTGGCACCTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATTGGGCATCTATCTTCTaGAAGTTCAGAGCCAGTTAC +
Preference number: 5 (lower is better)
Translates to: VLAPQLLLGNFTVLLGQDWASIF*KFRASY
Trigger: GTAACTGGCTCTGAACTTCAAGAAGATAGATGCCCA...ATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AGCACCCACCACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCACTTTAATGCATCACTaGGGCATCTATCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: STHHELASMLFLRSVDLRTLMHH*GIYLLE
Trigger: TTCAAGAAGATAGATGCCCAAGTGATGCATTAAAGT...GCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCTCTGGCCCACAGAGTAAACATTaGTTTAAAAGAAGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SHRCYFLGLLICAYRGSGPQSKH*FKRRCP
Trigger: TGGGCACCTTCTTTTAAACAAATGTTTACTCTGTGG...GCCAGAGCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAACCAGCAACAACGCCCTaGAGTTTCATCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: SWSLSRFCSQWILQVSDKPATTP*SFIMES
Trigger: AGATTCCATGATGAAACTCAAGGGCGTTGTTGCTGG...TTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp ATTTCCCATGGGAACTGCCTATCTTACCAAATCCCCAGAAAACAAACTGGTCTCCCAGCAACAACGCCCTaGAGTTTCATCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: ISHGNCLSYQIPRKQTGLPATTP*SFIMES
Trigger: AGATTCCATGATGAAACTCAAGGGCGTTGTTGCTGG...GAGACCAGTTTGTTTTCTGGGGATTTGGTAAGATAGGCAGTTCCCATGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AGAAGGGAGAAGCGGATCTCCAAATCCCAAGATACCGATGCCGGCCAAACTTCTTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: RREKRISKSQDTDAGQTSFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...AGAAGTTTGGCCGGCATCGGTATCTTGGGATTTGGAGATCCGCTTCTCCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp ATGTCCATGCCAGTCTTGAGCACCCACCACGAGCTCGCATCGATGCTATTTCTTTTACAGGTTGACTTTTaGGCACATCATAAACACCTT +
Preference number: 5 (lower is better)
Translates to: MSMPVLSTHHELASMLFLLQVDF*AHHKHL
Trigger: AAGGTGTTTATGATGTGCCAAAAAGTCAACCTGTAA...AAGAAATAGCATCGATGCGAGCTCGTGGTGGGTGCTCAAGACTGGCATGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
CDS-3UTR CAA 90 bp GGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGTGTCTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: GLSPGFAVSGFFRFLTKWCLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGACA...CCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCTCCATCAGGAGCTTCTaGCTCTTCGCTTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSSIRSF*LFAFAG
Trigger: CCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGA...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp ACGAGCTCGCATCGATGCTATTTCTTAGGTCTGTTGATCTGCGCGTACAGAGGCACCACATTACCAGAATaGTACCAGAATTATTTGGCA +
Preference number: 5 (lower is better)
Translates to: TSSHRCYFLGLLICAYRGTTLPE*YQNYLA
Trigger: TGCCAAATAATTCTGGTACAATTCTGGTAATGTGGT...GCCTCTGTACGCGCAGATCAACAGACCTAAGAAATAGCATCGATGCGAGCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCATAGAGATGAACCATTaGGACCACAGAATCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFIEMNH*DHRISL
Trigger: CAAACTGATTCTGTGGTCCAAATGGTTCATCTCTAT...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCACTCCCCATGGTCTTTaGGTATTGGCACCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSTPHGL*VLAPQL
Trigger: GAGCTGAGGTGCCAATACCAAAAGACCATGGGGAGT...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS TCA 90 bp TTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTaGCAAAATGGCTCTGGCACAGGTCTAGTCACTCTTGAATCTAAA +
Preference number: 5 (lower is better)
Translates to: LVSLQVLQSVDSSGF*QNGSGTGLVTLESK
Trigger: TTTAGATTCAAGAGTGACTAGACCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS GCA 90 bp CTTCCCACAAACATATCCAAAGGCCCGGTGATCTGTAATGTCCTTTaGAATGTAGGATATTTCATGAACAGCATGATGATGCTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LPTNISKGPVICNVL*NVGYFMNSMMMLKG
Trigger: GCCCTTCAGCATCATCATGCTGTTCATGAAATATCCTACATTGCAAAGGACATTACAGATCACCGGGCCTTTGGATATGTTTGTGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
ENST00000489267.1
CDS-3UTR CAA 90 bp CTCAGCTCTTGCTTGGAAATTTCACTGTACTCCTGGGACAGGATACGGTGCTTCTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: LSSCLEISLYSWDRIRCFFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...GAAGCACCGTATCCTGTCCCAGGAGTACAGTGAAATTTCCAAGCAAGAGCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CATATTGAGGGAGAAGATAGCACCACTTGTTTAGAATCAAATCATAGGCAACAAGGGGTTGGAGGTGAGTaGGTCGATGGTGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: HIEGEDSTTCLESNHRQQGVGGE*VDGVVE
Trigger: TTCTACCACACCATCGACCAACTCACCTCCAACCCC...TTGTTGCCTATGATTTGATTCTAAACAAGTGGTGCTATCTTCTCCCTCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTCCTCGGCCAGGCTCATaGAGGACTCTTCTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNIPRPGS*RTLLQE
Trigger: CTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAGG...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCTTGGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAACCCTCAGAAATAATCTaGGTCTCTCTCCAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: SWSLSRFCSQWILQVSDKPSEII*VSLQVL
Trigger: CAAAACCTGGAGAGAGACCAAGATTATTTCTGAGGG...TTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp AGATTGAAGAGCTATGGAGAATGGGGACAGAATGACAGGTGGTGTTTCCCTGGTGCAAATGACTTTTCTTaGAAAATGGCACGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: RLKSYGEWGQNDRWCFPGANDFS*KMARGE
Trigger: TTCTCCACGTGCCATTTTCAAAGAAAAGTCATTTGC...ACCAGGGAAACACCACCTGTCATTCTGTCCCCATTCTCCATAGCTCTTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCCCCCATCCATCAAGTTaGTCACACCTTGCACTCAAT +
Preference number: 5 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESPHPSS*SHLALN
Trigger: ATTGAGTGCAAGGTGTGACAAACTTGATGGATGGGG...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCTGTCTTTTTCTTGTGTaGCACGTAGGGTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSCLFLV*HVGWGL
Trigger: GAGTCCCCACCCTACGTGCAACACAAGAAAAAGACA...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS TCA 90 bp ACTCTTTTTGAGTGCTTTGTGTTGTACAAAAGAGTTCTTCAATCATaGAGACTGAGAGTCAGGGCTCACCACCATGTCTTGCTGAGTGCA +
Preference number: 5 (lower is better)
Translates to: TLFECFVLYKRVLQS*RLRVRAHHHVLLSA
Trigger: TGCACTCAGCAAGACATGGTGGTGAGCCCTGACTCTCAGTCTTCATGATTGAAGAACTCTTTTGTACAACACAAAGCACTCAAAAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS-3UTR CAA 90 bp GGTCTCTCTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTGACAAAATGGGAAGTTCTGTCTCAGTaGACATCCTACTTAATCCTT +
Preference number: 5 (lower is better)
Translates to: GLSPGFAVSGFFRFLTKWEVLSQ*TSYLIL
Trigger: AAGGATTAAGTAGGATGTCAACTGAGACAGAACTTC...CCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAGAGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS-3UTR CAA 90 bp GCCCTTCTCACTTTTCTGGTTCTTCGGACCTTCCACATTAGGATGATATTGACATCTGAGCGAGTTCCATaGGGCAATCATGAATTTCTT +
Preference number: 5 (lower is better)
Translates to: ALLTFLVLRTFHIRMILTSERVP*GNHEFL
Trigger: AAGAAATTCATGATTGCCCAATGGAACTCGCTCAGA...TGTCAATATCATCCTAATGTGGAAGGTCCGAAGAACCAGAAAAGTGAGAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TACCAAATCCCCAGAAAACAAACTGGTCTCAGGCCAACTCTTATGGTCATTCCATCTGAGCGAGTTCCATaGGGCAATCATGAATTTCTT +
Preference number: 5 (lower is better)
Translates to: YQIPRKQTGLRPTLMVIPSERVP*GNHEFL
Trigger: AAGAAATTCATGATTGCCCAATGGAACTCGCTCAGA...TGGAATGACCATAAGAGTTGGCCTGAGACCAGTTTGTTTTCTGGGGATTTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TTGTCACACCTTGCACTCAATCTGCTACCTTCTCTACAGTGTAATGGCATTATTCCTGTCACTCCAAATTaGGTGTCTCAACAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: LSHLALNLLPSLQCNGIIPVTPN*VSQQWS
Trigger: TGACCACTGTTGAGACACCAAATTTGGAGTGACAGG...AATAATGCCATTACACTGTAGAGAAGGTAGCAGATTGAGTGCAAGGTGTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp CAATGGGATCTGATGTCTTTTCCTACTCACAGAATGAAGGTTCGTACTGAAAGCTTGGCACCTCAGCTCTaGCTTGGAAATTTCACTGTA +
Preference number: 5 (lower is better)
Translates to: QWDLMSFPTHRMKVRTESLAPQL*LGNFTV
Trigger: TACAGTGAAATTTCCAAGCAAGAGCTGAGGTGCCAA...GCTTTCAGTACGAACCTTCATTCTGTGAGTAGGAAAAGACATCAGATCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS TCA 90 bp CTTTCATCTTCGTTTATTTCTACTTGGCAGCAGGAAGAGAAGGCCTaGCTGTCAGTTTTTACATGTGTTTATTTGAAGGCCCGATCTCCA +
Preference number: 5 (lower is better)
Translates to: LSSSFISTWQQEEKA*LSVFTCVYLKARSP
Trigger: TGGAGATCGGGCCTTCAAATAAACACATGTAAAAACTGACAGTCAGGCCTTCTCTTCCTGCTGCCAAGTAGAAATAAACGAAGATGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489267.1
CDS-3UTR CAA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCCAAGTTTGTCACACCTaGCACTCAATCTGCTACCTT +
Preference number: 5 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSQVCHT*HSICYL
Trigger: AAGGTAGCAGATTGAGTGCAAGGTGTGACAAACTTG...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS TCA 90 bp CATTTCATCTTCATGGTGCTGTCCTCATTTTACCATGGTTGGAGATaGTATAAGCCACAGATTTTCCAGCTAAATAGGACTGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: HFIFMVLSSFYHGWR*YKPQIFQLNRTGLH
Trigger: ATGGAGTCCAGTCCTATTTAGCTGGAAAATCTGTGGCTTATATCATCTCCAACCATGGTAAAATGAGGACAGCACCATGAAGATGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS-3UTR CAA 90 bp TTTTTGTGTGCTGCCATAGATATCTGCCATTGGTTGCCAAAAATGCTTAGTTCCCACAGCACTTACAGGTaGACTTTTTGGCACATCATA +
Preference number: 5 (lower is better)
Translates to: FLCAAIDICHWLPKMLSSHSTYR*TFWHII
Trigger: TATGATGTGCCAAAAAGTCAACCTGTAAGTGCTGTG...GGAACTAAGCATTTTTGGCAACCAATGGCAGATATCTATGGCAGCACACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp TCAATGAAAGAGGACAATTCTCCTGGACTTTCACCTTCTGCTAGGAAATTAACTGATATCTGCCATTGGTaGCCAAAAATGCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: SMKEDNSPGLSPSARKLTDICHW*PKMLSS
Trigger: GGAACTAAGCATTTTTGGCAACCAATGGCAGATATC...AGTTAATTTCCTAGCAGAAGGTGAAAGTCCAGGAGAATTGTCCTCTTTCATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS-3UTR CAA 90 bp AATATGTGTCAGAACGCAGAAATTGAAATGAACCAAACCCACAGAGTAAACATTCAGCCAGAGTTCACTTaGAATGTGTCAGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: NMCQNAEIEMNQTHRVNIQPEFT*NVSEAT
Trigger: GGTTGCTTCTGACACATTCAAAGTGAACTCTGGCTG...AATGTTTACTCTGTGGGTTTGGTTCATTTCAATTTCTGCGTTCTGACACATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371236.7
ENST00000414851.6
CDS GCA 90 bp TTTCTAACAACGACTGTCATGGTTTGCCAAATACCTTCTCTTTTGTaGTTTCATTTCATCTTCATGGTGCTGTCCTCATTTTACCATGGT +
Preference number: 5 (lower is better)
Translates to: FLTTTVMVCQIPSLL*FHFIFMVLSSFYHG
Trigger: ACCATGGTAAAATGAGGACAGCACCATGAAGATGAAATGAAAGCACAAAAGAGAAGGTATTTGGCAAACCATGACAGTCGTTGTTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS GCA 72 bp TTGAGTGCTCGCCTAGCCCAGAGCATCCTCCTCCGCTaGCGCAGCCGCCCAGGAAGCGGCTCCCCATGCCCG +
Preference number: 6 (lower is better)
Translates to: LSARLAQSILLR*RSRPGSGSPCP
Trigger: CGGGCATGGGGAGCCGCTTCCTGGGCGGCTGCGGCAGCGGAGGAGGATGCTCTGGGCTAGGCGAGCACTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371230.1
ENST00000371236.7
CDS TCA 72 bp GGCGGAAACTGCCCGGCCACAGTTGGCCAGGGCTGCTaGGTGGCAGGAAAGAGACCCGGCTGGCCCCATGCG +
Preference number: 6 (lower is better)
Translates to: GGNCPATVGQGC*VAGKRPGWPHA
Trigger: CGCATGGGGCCAGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAGTTTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS GCA 72 bp CTGCTGAGTGGCAGGAAAGAGACCCGGCTGGCCCCATaGGATGGGCTGAGCCCCCGGCATCACCTGAGCGAC +
Preference number: 6 (lower is better)
Translates to: LLSGRKETRLAP*DGLSPRHHLSD
Trigger: GTCGCTCAGGTGATGCCGGGGGCTCAGCCCATCGCATGGGGCCAGCCGGGTCTCTTTCCTGCCACTCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp GAGTGGCAGGAAAGAGACCCGGCTGGCCCCATGCGATaGGCTGAGCCCCCGGCATCACCTGAGCGACTGGTG +
Preference number: 6 (lower is better)
Translates to: EWQERDPAGPMR*AEPPASPERLV
Trigger: CACCAGTCGCTCAGGTGATGCCGGGGGCTCAGCCCATCGCATGGGGCCAGCCGGGTCTCTTTCCTGCCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp GAAACTGCCCGGCCACAGTTGGCCAGGGCTGCTGAGTaGCAGGAAAGAGACCCGGCTGGCCCCATGCGATGG +
Preference number: 6 (lower is better)
Translates to: ETARPQLARAAE*QERDPAGPMRW
Trigger: CCATCGCATGGGGCCAGCCGGGTCTCTTTCCTGCCACTCAGCAGCCCTGGCCAACTGTGGCCGGGCAGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 90 bp CATCACCTGAGCGACTGGTGGCTGGGCACCCATGACCATCTGCTGTaGGACGAGGGGCTGCTGACCCCAGAAGGACGGGAGGACAGCGCC +
Preference number: 6 (lower is better)
Translates to: HHLSDWWLGTHDHLL*DEGLLTPEGREDSA
Trigger: GGCGCTGTCCTCCCGTCCTTCTGGGGTCAGCAGCCCCTCGTCCAACAGCAGATGGTCATGGGTGCCCAGCCACCAGTCGCTCAGGTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 72 bp AGCGACTGGTGGCTGGGCACCCATGACCATCTGCTGTaGGACGAGGGGCTGCTGACCCCAGAAGGACGGGAG +
Preference number: 6 (lower is better)
Translates to: SDWWLGTHDHLL*DEGLLTPEGRE
Trigger: CTCCCGTCCTTCTGGGGTCAGCAGCCCCTCGTCCAACAGCAGATGGTCATGGGTGCCCAGCCACCAGTCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS TCA 72 bp GCCCATTTTCTGCCTGGGCTTGTCGGTCTGTGGACTTaGCCTGGTGGAGTCACTCGTGCCTGGGACGGTGGC +
Preference number: 6 (lower is better)
Translates to: AHFLPGLVGLWT*PGGVTRAWDGG
Trigger: GCCACCGTCCCAGGCACGAGTGACTCCACCAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp CAAAGGCATAACAGTTTGTGTGGGCATGAAGGCGGCTaGCGGAAACTGCCCGGCCACAGTTGGCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: QRHNSLCGHEGG*RKLPGHSWPGL
Trigger: CAGCCCTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCCACACAAACTGTTATGCCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp TTTTCTGCCTGGGCTTGTCGGTCTGTGGACTTGACCTaGTGGAGTCACTCGTGCCTGGGACGGTGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: FSAWACRSVDLT*WSHSCLGRWQG
Trigger: CCCTTGCCACCGTCCCAGGCACGAGTGACTCCACCAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 72 bp TGCCCATTTTCTGCCTGGGCTTGTCGGTCTGTGGACTaGACCTGGTGGAGTCACTCGTGCCTGGGACGGTGG +
Preference number: 6 (lower is better)
Translates to: CPFSAWACRSVD*TWWSHSCLGRW
Trigger: CCACCGTCCCAGGCACGAGTGACTCCACCAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 90 bp GGTGAGGGGACCTTGGAACATGGCAGCTGGCAAAGGCATAACAGTTaGTGTGGGCATGAAGGCGGCTGGCGGAAACTGCCCGGCCACAGT +
Preference number: 6 (lower is better)
Translates to: GEGTLEHGSWQRHNS*CGHEGGWRKLPGHS
Trigger: ACTGTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCCACACAAACTGTTATGCCTTTGCCAGCTGCCATGTTCCAAGGTCCCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp TGGCTCCCAGACCTGCGCTATCTAGCTACCGGCCTGTaGACTTATATTATCACCACTGGGCTCCCCACTGGG +
Preference number: 6 (lower is better)
Translates to: WLPDLRYLATGL*TYIITTGLPTG
Trigger: CCCAGTGGGGAGCCCAGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAGATAGCGCAGGTCTGGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 90 bp TGCCCAGGGTCTGGACTGAAGAAGCTGGATGATGTCTTCCCAAGATaGCCGGGGCCACGAGTCAGGAATCGTCATGGAGAGAAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: CPGSGLKKLDDVFPR*PGPRVRNRHGEKPR
Trigger: CCTTGGCTTCTCTCCATGACGATTCCTGACTCGTGGCCCCGGCAATCTTGGGAAGACATCATCCAGCTTCTTCAGTCCAGACCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS TCA 72 bp CACTTCACACAGATCCCGGGCCTCGGCCAGGCTCATTaGGGACTCTTCTCCAAGAGAAAGACTCCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: HFTQIPGLGQAH*GLFSKRKTPPF
Trigger: GAAGGGAGGAGTCTTTCTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAGGCCCGGGATCTGTGTGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371230.1
ENST00000371236.7
ENST00000414851.6
ENST00000473821.1
ENST00000485760.5
CDS CAA 72 bp CCACTTCACACAGATCCCGGGCCTCGGCCAGGCTCATaGAGGACTCTTCTCCAAGAGAAAGACTCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: PLHTDPGPRPGS*RTLLQEKDSSL
Trigger: AAGGGAGGAGTCTTTCTCTTGGAGAAGAGTCCTCAATGAGCCTGGCCGAGGCCCGGGATCTGTGTGAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371230.1
ENST00000371236.7
ENST00000414851.6
ENST00000473821.1
ENST00000485760.5
CDS TCA 72 bp GTCATCTGTGGTAGGATCACTGGCATGGGATGCAGATaGTTTGGATGGAGAGCTCTGTCTAGGGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: VICGRITGMGCR*FGWRALSRGWG
Trigger: ACCCCAGCCCCTAGACAGAGCTCTCCATCCAAATCATCTGCATCCCATGCCAGTGATCCTACCACAGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS TCA 72 bp GTGAGCTTGTGTAGGCTTCAAGTGGAGGTTGAGGCCTaGGGCCCAAACAACTCGCTTTCTCCACTCCACACT +
Preference number: 6 (lower is better)
Translates to: VSLCRLQVEVEA*GPNNSLSPLHT
Trigger: AGTGTGGAGTGGAGAAAGCGAGTTGTTTGGGCCTCAGGCCTCAACCTCCACTTGAAGCCTACACAAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS CAA 72 bp TCTGGACTGAAGAAGCTGGATGATGTCTTCCCAAGATaGCCGGGGCCACGAGTCAGGAATCGTCATGGAGAG +
Preference number: 6 (lower is better)
Translates to: SGLKKLDDVFPR*PGPRVRNRHGE
Trigger: CTCTCCATGACGATTCCTGACTCGTGGCCCCGGCAATCTTGGGAAGACATCATCCAGCTTCTTCAGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CAA 90 bp TTATCACCACTGGGCTCCCCACTGGGCTCACCAAATGGATCACTGTaGGATGAGGCCTGTGATCCATCAGGAGCTTCTTGCTCTTCGCTT +
Preference number: 6 (lower is better)
Translates to: LSPLGSPLGSPNGSL*DEACDPSGASCSSL
Trigger: AAGCGAAGAGCAAGAAGCTCCTGATGGATCACAGGCCTCATCCAACAGTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTGGTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp CCTGTGGACTTATATTATCACCACTGGGCTCCCCACTaGGCTCACCAAATGGATCACTGTTGGATGAGGCCT +
Preference number: 6 (lower is better)
Translates to: PVDLYYHHWAPH*AHQMDHCWMRP
Trigger: AGGCCTCATCCAACAGTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAAGTCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp TCTAGCTACCGGCCTGTGGACTTATATTATCACCACTaGGCTCCCCACTGGGCTCACCAAATGGATCACTGT +
Preference number: 6 (lower is better)
Translates to: SSYRPVDLYYHH*APHWAHQMDHC
Trigger: ACAGTGATCCATTTGGTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 72 bp GGAGGCTGGGCCATCTGGAAATCCTTAAACGTTTCTTaGCCCATTTTCTGCCTGGGCTTGTCGGTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: GGWAIWKSLNVS*PIFCLGLSVCG
Trigger: TCCACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGATTTCCAGATGGCCCAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 90 bp ATCTGGAAATCCTTAAACGTTTCTTTGCCCATTTTCTGCCTGGGCTaGTCGGTCTGTGGACTTGACCTGGTGGAGTCACTCGTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: IWKSLNVSLPIFCLG*SVCGLDLVESLVPG
Trigger: CCCAGGCACGAGTGACTCCACCAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGATTTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 72 bp CCCCGAGCTGCGGAAACTTCATCAATCCCGATCAATTaGGCTTTGTACCGGACCCCTTCACCTTTAAACCTC +
Preference number: 6 (lower is better)
Translates to: PRAAETSSIPIN*ALYRTPSPLNL
Trigger: GAGGTTTAAAGGTGAAGGGGTCCGGTACAAAGCCAAATTGATCGGGATTGATGAAGTTTCCGCAGCTCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 72 bp TCCTTAAACGTTTCTTTGCCCATTTTCTGCCTGGGCTaGTCGGTCTGTGGACTTGACCTGGTGGAGTCACTC +
Preference number: 6 (lower is better)
Translates to: SLNVSLPIFCLG*SVCGLDLVESL
Trigger: GAGTGACTCCACCAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS TCA 72 bp ACTAAACACATCTGCACTCGCTGGAAGGGTCTGAGATaGAGATGGGATAAAGGCATCACCTGGAGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: TKHICTRWKGLR*RWDKGITWSCR
Trigger: CCTGCAACTCCAGGTGATGCCTTTATCCCATCTTCATCTCAGACCCTTCCAGCGAGTGCAGATGTGTTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS GCA 72 bp GGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTaGCACCCCGACTTTGTTGAAGTAACTGGAGAAGGC +
Preference number: 6 (lower is better)
Translates to: GDVKVITVVCIL*HPDFVEVTGEG
Trigger: GCCTTCTCCAGTTACTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS TCA 72 bp CCAGCAACAACGCCCTTGAGTTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGAGCTGCGGAAACTTCA +
Preference number: 6 (lower is better)
Translates to: PATTPLSFIMES*HNLSPRAAETS
Trigger: TGAAGTTTCCGCAGCTCGGGGAGACAAGTTATGTCAAGATTCCATGATGAAACTCAAGGGCGTTGTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS GCA 72 bp GGTTGGCCATGCAGGCTATCAACGAACTCCATTTGCTaGCAAAACACTGAACTGGCTCTTATGTCTGCACAA +
Preference number: 6 (lower is better)
Translates to: GWPCRLSTNSIC*QNTELALMSAQ
Trigger: TTGTGCAGACATAAGAGCCAGTTCAGTGTTTTGGCAGCAAATGGAGTTCGTTGATAGCCTGCATGGCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS GCA 72 bp TTGGGTTGGCCATGCAGGCTATCAACGAACTCCATTTaGTGCCAAAACACTGAACTGGCTCTTATGTCTGCA +
Preference number: 6 (lower is better)
Translates to: LGWPCRLSTNSI*CQNTELALMSA
Trigger: TGCAGACATAAGAGCCAGTTCAGTGTTTTGGCAGCAAATGGAGTTCGTTGATAGCCTGCATGGCCAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CAA 72 bp GCCTGTGATCCATCAGGAGCTTCTTGCTCTTCGCTTTaGCTGGGACTTTCAAAGCCCTCTTCAAAGATGTCA +
Preference number: 6 (lower is better)
Translates to: ACDPSGASCSSL*LGLSKPSSKMS
Trigger: TGACATCTTTGAAGAGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGATCACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 90 bp TGGTGGGAACCTGATAAATGTTTTCTTCCGTTTCGGGATCACGGATaGGCTCGTGTCCAGCCTCAAACACAATGTACTGGTACACAGGAT +
Preference number: 6 (lower is better)
Translates to: WWEPDKCFLPFRDHG*ARVQPQTQCTGTQD
Trigger: ATCCTGTGTACCAGTACATTGTGTTTGAGGCTGGACACGAGCCAATCCGTGATCCCGAAACGGAAGAAAACATTTATCAGGTTCCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000485760.5
CDS TCA 72 bp ACAGAACTAAACACATCTGCACTCGCTGGAAGGGTCTaGGATGAAGATGGGATAAAGGCATCACCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: TELNTSALAGRV*DEDGIKASPGV
Trigger: AACTCCAGGTGATGCCTTTATCCCATCTTCATCTCAGACCCTTCCAGCGAGTGCAGATGTGTTTAGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS TCA 72 bp CTCCAGGTTTTGCAGTCAGTGGATTCTTCAGGTTTCTaGCAAAATGGCTCTGGCACAGGTCTAGTCACTCTT +
Preference number: 6 (lower is better)
Translates to: LQVLQSVDSSGF*QNGSGTGLVTL
Trigger: AAGAGTGACTAGACCTGTGCCAGAGCCATTTTGTCAGAAACCTGAAGAATCCACTGACTGCAAAACCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371230.1
CDS GCA 72 bp CCTGTGATCCATCAGGAGCTTCTTGCTCTTCGCTTTTaGTGGGACTTTCAAAGCCCTCTTCAAAGATGTCAT +
Preference number: 6 (lower is better)
Translates to: PVIHQELLALRF*WDFQSPLQRCH
Trigger: ATGACATCTTTGAAGAGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGATCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS GCA 72 bp TGTGTAGATAACCATTCTGGCATCTTGGGTTGGCCATaGAGGCTATCAACGAACTCCATTTGCTGCCAAAAC +
Preference number: 6 (lower is better)
Translates to: CVDNHSGILGWP*RLSTNSICCQN
Trigger: GTTTTGGCAGCAAATGGAGTTCGTTGATAGCCTGCATGGCCAACCCAAGATGCCAGAATGGTTATCTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CCA 72 bp CACTGCGATCCTGACCTTTCTTTCTGGAGTCTTTCTTaGCGCTGGTTTTCACAGCTACTTGAAGTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: HCDPDLSFWSLS*RWFSQLLEVLS
Trigger: AGACAGAACTTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGAAAGAAAGGTCAGGATCGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp GATGGTGTGGTAGAAGTCACAGGGGTCAAATTCAACTaGGAGATGTCAAAGTCATCACAGTCGTCTGTATCC +
Preference number: 6 (lower is better)
Translates to: DGVVEVTGVKFN*EMSKSSQSSVS
Trigger: GGATACAGACGACTGTGATGACTTTGACATCTCCCAGTTGAATTTGACCCCTGTGACTTCTACCACACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CCA 72 bp GTGATCCATCAGGAGCTTCTTGCTCTTCGCTTTTGCTaGGACTTTCAAAGCCCTCTTCAAAGATGTCATCTG +
Preference number: 6 (lower is better)
Translates to: VIHQELLALRFC*DFQSPLQRCHL
Trigger: CAGATGACATCTTTGAAGAGGGCTTTGAAAGTCCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 72 bp CCTGATAAATGTTTTCTTCCGTTTCGGGATCACGGATaGGCTCGTGTCCAGCCTCAAACACAATGTACTGGT +
Preference number: 6 (lower is better)
Translates to: PDKCFLPFRDHG*ARVQPQTQCTG
Trigger: ACCAGTACATTGTGTTTGAGGCTGGACACGAGCCAATCCGTGATCCCGAAACGGAAGAAAACATTTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000485760.5
CDS CAA 72 bp TCTGCACAAGCCTTTGCAGCAAGCAGTAGTCCAATTTaGTCAGCTTCGGCCTCCAATTTTCTGCTGTATGGT +
Preference number: 6 (lower is better)
Translates to: SAQAFAASSSPI*SASASNFLLYG
Trigger: ACCATACAGCAGAAAATTGGAGGCCGAAGCTGACAAAATTGGACTACTGCTTGCTGCAAAGGCTTGTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CCA 72 bp GATCCTGACCTTTCTTTCTGGAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAAGTTCTGTCTCAGTTG +
Preference number: 6 (lower is better)
Translates to: DPDLSFWSLSWR*FSQLLEVLSQL
Trigger: CAACTGAGACAGAACTTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGAAAGAAAGGTCAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000473821.1
ENST00000485760.5
CDS CCA 72 bp CTGATAAATGTTTTCTTCCGTTTCGGGATCACGGATTaGCTCGTGTCCAGCCTCAAACACAATGTACTGGTA +
Preference number: 6 (lower is better)
Translates to: LINVFFRFGITD*LVSSLKHNVLV
Trigger: TACCAGTACATTGTGTTTGAGGCTGGACACGAGCCAATCCGTGATCCCGAAACGGAAGAAAACATTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371231.5
ENST00000371236.7
ENST00000414851.6
ENST00000485760.5
CDS CAA 72 bp GCTGCGGAAACTTCATCAATCCCGATCAATTTGGCTTaGTACCGGACCCCTTCACCTTTAAACCTCTTTATC +
Preference number: 6 (lower is better)
Translates to: AAETSSIPINLA*YRTPSPLNLFI
Trigger: GATAAAGAGGTTTAAAGGTGAAGGGGTCCGGTACAAAGCCAAATTGATCGGGATTGATGAAGTTTCCGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 90 bp CCTCCAAAGGAGATGGTTAAAAAGATTTTCTGTTTGTGTTCTCCTTaGGAACGAGCGCCAGCAACAACGCCCTTGAGTTTCATCATGGAA +
Preference number: 6 (lower is better)
Translates to: PPKEMVKKIFCLCSP*ERAPATTPLSFIME
Trigger: TTCCATGATGAAACTCAAGGGCGTTGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAACAGAAAATCTTTTTAACCATCTCCTTTGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332102.10
ENST00000371230.1
ENST00000371231.5
ENST00000371232.8
ENST00000371236.7
ENST00000414851.6
ENST00000420954.6
ENST00000485760.5
CDS CAA 90 bp GCTCTTATGTCTGCACAAGCCTTTGCAGCAAGCAGTAGTCCAATTTaGTCAGCTTCGGCCTCCAATTTTCTGCTGTATGGTCTATTAAAC +
Preference number: 6 (lower is better)
Translates to: ALMSAQAFAASSSPI*SASASNFLLYGLLN
Trigger: GTTTAATAGACCATACAGCAGAAAATTGGAGGCCGAAGCTGACAAAATTGGACTACTGCTTGCTGCAAAGGCTTGTGCAGACATAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS TCA 72 bp GAGTGCTTTGTGTTGTACAAAAGAGTTCTTCAATCATaGAGACTGAGAGTCAGGGCTCACCACCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: ECFVLYKRVLQS*RLRVRAHHHVL
Trigger: CAAGACATGGTGGTGAGCCCTGACTCTCAGTCTTCATGATTGAAGAACTCTTTTGTACAACACAAAGCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS GCA 72 bp GGATATGAGTACATCCTTGTGACACAGCGTGAGCACTaGTGTAGAAGAGGAATAAACAGGACCTGTAGAATA +
Preference number: 6 (lower is better)
Translates to: GYEYILVTQREH*CRRGINRTCRI
Trigger: TATTCTACAGGTCCTGTTTATTCCTCTTCTACAGCAGTGCTCACGCTGTGTCACAAGGATGTACTCATATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477280.1
CDS CAA 90 bp CTCCACTCCACACTCACCTCCCATTTAACAGGAAGACAACAAACCTaGTCAGAACATAGCAACAGTGAAAGGAAAGGATCTTGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: LHSTLTSHLTGRQQT*SEHSNSERKGSCSF
Trigger: AAAACTGCAAGATCCTTTCCTTTCACTGTTGCTATGTTCTGACAAGGTTTGTTGTCTTCCTGTTAAATGGGAGGTGAGTGTGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS TCA 72 bp CTGGTGAGAATTTCTAAAAGCTCCCAAGGGCCTTTCTaGCATTTCATCATTAACTCCTTTTGCCTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: LVRISKSSQGPF*HFIINSFCLLC
Trigger: GCAGAGAAGGCAAAAGGAGTTAATGATGAAATGTCAGAAAGGCCCTTGGGAGCTTTTAGAAATTCTCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS TCA 72 bp AGCAAAAGCAATTGTGTTTCTTGGGTCCTCCACCCCTaGAATCTTTCTCTGGATTCGAGATTTCACTTCATC +
Preference number: 6 (lower is better)
Translates to: SKSNCVSWVLHP*NLSLDSRFHFI
Trigger: GATGAAGTGAAATCTCGAATCCAGAGAAAGATTTCAGGGGTGGAGGACCCAAGAAACACAATTGCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489267.1
CDS TCA 72 bp GGTATAAGTCTATCCAAGTACTCAACTCGATTGCCATaGGAAGGGTGTGTAGATAACCATTCTGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: GISLSKYSTRLP*EGCVDNHSGIL
Trigger: CAAGATGCCAGAATGGTTATCTACACACCCTTCTCATGGCAATCGAGTTGAGTACTTGGATAGACTTATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CCA 72 bp GTGTTTCTTGGGTCCTCCACCCCTGAAATCTTTCTCTaGATTCGAGATTTCACTTCATCTAACATGTCTAGA +
Preference number: 6 (lower is better)
Translates to: VFLGSSTPEIFL*IRDFTSSNMSR
Trigger: TCTAGACATGTTAGATGAAGTGAAATCTCGAATCCAGAGAAAGATTTCAGGGGTGGAGGACCCAAGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489267.1
CDS CCA 72 bp AGAGAAGCCAAGGAAATAGCCCAAAGGATTTCTTCTTaGACTCACACTCTCCAAGGCAGTGAATTTGCATTT +
Preference number: 6 (lower is better)
Translates to: REAKEIAQRISS*THTLQGSEFAF
Trigger: AAATGCAAATTCACTGCCTTGGAGAGTGTGAGTCCAAGAAGAAATCCTTTGGGCTATTTCCTTGGCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS CAA 72 bp ACACTCACCTCCCATTTAACAGGAAGACAACAAACCTaGTCAGAACATAGCAACAGTGAAAGGAAAGGATCT +
Preference number: 6 (lower is better)
Translates to: TLTSHLTGRQQT*SEHSNSERKGS
Trigger: AGATCCTTTCCTTTCACTGTTGCTATGTTCTGACAAGGTTTGTTGTCTTCCTGTTAAATGGGAGGTGAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS CAA 90 bp CCCAAAGGATTTCTTCTTGGACTCACACTCTCCAAGGCAGTGAATTaGCATTTAGGTAAAATACGAAGACTGGGAAGTACTTTTGAAATG +
Preference number: 6 (lower is better)
Translates to: PKGFLLGLTLSKAVN*HLGKIRRLGSTFEM
Trigger: CATTTCAAAAGTACTTCCCAGTCTTCGTATTTTACCTAAATGCAAATTCACTGCCTTGGAGAGTGTGAGTCCAAGAAGAAATCCTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS TCA 72 bp TTCATGGTGCTGTCCTCATTTTACCATGGTTGGAGATaGTATAAGCCACAGATTTTCCAGCTAAATAGGACT +
Preference number: 6 (lower is better)
Translates to: FMVLSSFYHGWR*YKPQIFQLNRT
Trigger: AGTCCTATTTAGCTGGAAAATCTGTGGCTTATATCATCTCCAACCATGGTAAAATGAGGACAGCACCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS CAA 72 bp TTTACACAGGAATCTTTCATCTTCGTTTATTTCTACTaGGCAGCAGGAAGAGAAGGCCTGACTGTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: FTQESFIFVYFY*AAGREGLTVSF
Trigger: AAAACTGACAGTCAGGCCTTCTCTTCCTGCTGCCAAGTAGAAATAAACGAAGATGAAAGATTCCTGTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489267.1
CDS CAA 72 bp TTTCTTCTTGGACTCACACTCTCCAAGGCAGTGAATTaGCATTTAGGTAAAATACGAAGACTGGGAAGTACT +
Preference number: 6 (lower is better)
Translates to: FLLGLTLSKAVN*HLGKIRRLGST
Trigger: AGTACTTCCCAGTCTTCGTATTTTACCTAAATGCAAATTCACTGCCTTGGAGAGTGTGAGTCCAAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485760.5
CDS TCA 72 bp AGTCCAAGATCTCTTCTGTACCTTGTAAATACCACCTaGCTTCTGGCTCTATATTATGCTACCTTAATTAGA +
Preference number: 6 (lower is better)
Translates to: SPRSLLYLVNTT*LLALYYATLIR
Trigger: TCTAATTAAGGTAGCATAATATAGAGCCAGAAGTCAGGTGGTATTTACAAGGTACAGAAGAGATCTTGGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473821.1
CDS TCA 72 bp AAATCTCAGAAGAAGGAAACAGAGAACCAATCAGTCTaGTTAACTATCCGTAGGTTAGTGCCAATAAACAGT +
Preference number: 6 (lower is better)
Translates to: KSQKKETENQSV*LTIRRLVPINS
Trigger: ACTGTTTATTGGCACTAACCTACGGATAGTTAATCAGACTGATTGGTTCTCTGTTTCCTTCTTCTGAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477280.1