RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAAM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000146122

Ensembl transcript IDs: ENST00000274867.9, ENST00000398904.6, ENST00000405961.3, ENST00000475489.5, ENST00000491083.2, ENST00000494405.2, ENST00000496787.1, ENST00000538976.5, ENST00000631498.1, ENST00000632657.1, ENST00000633794.1

Found 1246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTGGGTTCCAGGATGGCCTCTTCACACCTGTGTCAGCCAGGCTTaGACTTGCTCAGATCCCTCCCACCAGAACACACACACACCGCCC +
Preference number: 1 (lower is better)
Translates to: TWVPGWPLHTCVSQA*TCSDPSHQNTHTPP
Trigger: GGGCGGTGTGTGTGTGTTCTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACAGGTGTGAAGAGGCCATCCTGGAACCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 90 bp CTGGATTCCCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTaGTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTC +
Preference number: 1 (lower is better)
Translates to: LDSLTRFPLRGSLHH*SPCYTGTLDKAVDL
Trigger: GAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGGGAATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 90 bp ACCAACTCCCCAACGCCAGTGGACACATGGTTCCAAGTGGCCACCTaGAGGCTGGACAGAGGCTGCTGTGGCTTCTGCCTTGAAGCTAGT +
Preference number: 1 (lower is better)
Translates to: TNSPTPVDTWFQVAT*RLDRGCCGFCLEAS
Trigger: ACTAGCTTCAAGGCAGAAGCCACAGCAGCCTCTGTCCAGCCTGCAGGTGGCCACTTGGAACCATGTGTCCACTGGCGTTGGGGAGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR TCA 90 bp TGCTGCCCTCTGCTGAGGGGCTGTAGGGGACTCCAAGGCAACATTTaGGGTCACTGTCTGGCTTCACAACAATGGCCAGGTGTCCAGGAG +
Preference number: 1 (lower is better)
Translates to: CCPLLRGCRGLQGNI*GHCLASQQWPGVQE
Trigger: CTCCTGGACACCTGGCCATTGTTGTGAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAGTCCCCTACAGCCCCTCAGCAGAGGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 90 bp CTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTaGTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTA +
Preference number: 1 (lower is better)
Translates to: LTRFPLRGSLHHCSP*YTGTLDKAVDLSSL
Trigger: TAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 90 bp AGCCATGGAATTGATGCGGTCGATGTAATAGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCCTGGGAGCA +
Preference number: 1 (lower is better)
Translates to: SHGIDAVDVIVRPAG*QLVGVLLLPPCLGA
Trigger: TGCTCCCAGGCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATTACATCGACCGCATCAATTCCATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR CCA 90 bp TTCCCTGCCCCTGAGGGGGTTAGGTTGACATCAGCCTGGTCAGTTTaGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTCC +
Preference number: 1 (lower is better)
Translates to: FPAPEGVRLTSAWSV*ERTFRGLTHNLPSS
Trigger: GGAAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCTAACCCCCTCAGGGGCAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp ATAGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTaGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCCCTGCC +
Preference number: 1 (lower is better)
Translates to: IVLLFPGAYPVFHGG*ECQTRLWSPPLFPA
Trigger: GGCAGGGAACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp TTCCATAGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTaGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCCC +
Preference number: 1 (lower is better)
Translates to: FHSPFVSRCVSSLPW*VGMPDTLVEPSPVP
Trigger: GGGAACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACTATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp CTCATAGGCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTaGTTCCTCATCTCCGTCTCCTCCTCATCAAACGCGTACAGACTC +
Preference number: 1 (lower is better)
Translates to: LIGCVRRAVFRSSTT*FLISVSSSSNAYRL
Trigger: GAGTCTGTACGCGTTTGATGAGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGCCTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR GCA 90 bp TATAGCCAAACTCTCTGCAGCTGTTCTGCCTGGAAGCCTTCATCTTaGCCTCACCTGGGTTCCAGGATGGCCTCTTCACACCTGTGTCAG +
Preference number: 1 (lower is better)
Translates to: YSQTLCSCSAWKPSS*PHLGSRMASSHLCQ
Trigger: CTGACACAGGTGTGAAGAGGCCATCCTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCAGGCAGAACAGCTGCAGAGAGTTTGGCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp GATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATaGAAGGTGGCAGTGGATGGGAGGACCAGAAGGAACCCCTTGCAA +
Preference number: 1 (lower is better)
Translates to: DTAIPSTKASMRWTK*KVAVDGRTRRNPLQ
Trigger: TTGCAAGGGGTTCCTTCTGGTCCTCCCATCCACTGCCACCTTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp AGCTTCCATAGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATaGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTT +
Preference number: 1 (lower is better)
Translates to: SFHSPFVSRCVSSLP*WVGMPDTLVEPSPV
Trigger: AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACTATGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp CCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATaGTCCAAGGCACTGTTGGAGATCTGGCTACAGTGGCATCTAGCA +
Preference number: 1 (lower is better)
Translates to: PTGHQPLLTQLSMSP*SKALLEIWLQWHLA
Trigger: TGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR TCA 90 bp AGAGAACTATGGGATGGAGCTAAGCATTCAAGTGCTGCCCTCTGCTaGGGGGCTGTAGGGGACTCCAAGGCAACATTTGAGGTCACTGTC +
Preference number: 1 (lower is better)
Translates to: RELWDGAKHSSAALC*GAVGDSKATFEVTV
Trigger: GACAGTGACCTCAAATGTTGCCTTGGAGTCCCCTACAGCCCCTCAGCAGAGGGCAGCACTTGAATGCTTAGCTCCATCCCATAGTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp ACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCTaGCTACAGTGGCATCTAGCACCAGAGCCACTGGCCAGATGTAGA +
Preference number: 1 (lower is better)
Translates to: TQLSMSPWSKALLEI*LQWHLAPEPLARCR
Trigger: TCTACATCTGGCCAGTGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp AAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTaGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTC +
Preference number: 1 (lower is better)
Translates to: KTKKQPIKDQLSHPD*APAPSYSVEYESMV
Trigger: GACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 90 bp GAGGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTaGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATG +
Preference number: 1 (lower is better)
Translates to: EAAVASALKLVLEKG*EGLSNLYEVENYGM
Trigger: CATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 90 bp CTAGAATATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTaGCCCCAGGTCAATGTTCTGTTGAGCCTCCCCTTGAGAGAAGGG +
Preference number: 1 (lower is better)
Translates to: LEYIMPPLFPFKRKV*PQVNVLLSLPLREG
Trigger: CCCTTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 90 bp ATCAAATGTATCTTGAACAGCTTCCATAGTCCTTTTGTTTCCAGGTaGGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTT +
Preference number: 1 (lower is better)
Translates to: IKCILNSFHSPFVSR*VSSLPWWVGMPDTL
Trigger: AAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACTATGGAAGCTGTTCAAGATACATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 90 bp GGTTCCAGGATGGCCTCTTCACACCTGTGTCAGCCAGGCTTGCACTaGCTCAGATCCCTCCCACCAGAACACACACACACCGCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: GSRMASSHLCQPGLH*LRSLPPEHTHTARP
Trigger: GGGGCGGGCGGTGTGTGTGTGTTCTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACAGGTGTGAAGAGGCCATCCTGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCCAGCCTGGGGTTACCTaGCCTGAGGCCATCCAAGGC +
Preference number: 2 (lower is better)
Translates to: LLFAPSERLRGGATLRDSQPGVT*PEAIQG
Trigger: GCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTG...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCCAGCCTGGGGTTACCTaGCCTGAGGCCATCCAAGGC +
Preference number: 2 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFQPGVT*PEAIQG
Trigger: GCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTG...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp ATAGTCAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCAGCAAGCCCCAGTCCTaGGATGCAGCAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: IVRPAGCQLVGVLLLPPCSKPQS*DAAGPA
Trigger: AGCAGGACCTGCTGCATCCCAGGACTGGGGCTTGCT...GCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR CAA 90 bp CACCTGGGTTCCAGGATGGCCTCTTCACACCTGTGTCAGCCAGGCTaGCACTTGCTCAGATCCCTCCCACCAGAACACACACACACCGCC +
Preference number: 2 (lower is better)
Translates to: HLGSRMASSHLCQPG*HLLRSLPPEHTHTA
Trigger: GGCGGTGTGTGTGTGTTCTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACAGGTGTGAAGAGGCCATCCTGGAACCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATGCGTGGGGAGACACCTaGTCCAGCCACACACAGCCC +
Preference number: 2 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDAWGDT*SSHTQP
Trigger: GGGCTGTGTGTGGCTGGACCAGGTGTCTCCCCACGC...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR-3UTR GCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCAGCCAGGCTTGCACTTaGTCAGATCCCTCCCACCAG +
Preference number: 2 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESSQACT*SDPSHQ
Trigger: CTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp GCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGGCCCCAGTCCTGGGATaGAGCAGGTCCTGCTTTAAG +
Preference number: 2 (lower is better)
Translates to: AVSGGLSSGLPRLGSSSPAPVLG*SRSCFK
Trigger: CTTAAAGCAGGACCTGCTGCATCCCAGGACTGGGGC...CGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR-3UTR GCA 90 bp GGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTCCTGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: GGLSSGLPRLGSSSPSPPVRPAG*QLVGVL
Trigger: GAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGAC...AGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCGAAGGTGGCAGTGGATaGGAGGACCAGAAGGAACCC +
Preference number: 2 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSEGGSG*EDQKEP
Trigger: GGGTTCCTTCTGGTCCTCCCATCCACTGCCACCTTC...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 90 bp TCTGGATTCCCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCT +
Preference number: 2 (lower is better)
Translates to: SGFPHQIPSQGLPPS*LPVLHRNSGQGCGP
Trigger: AGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGGGAATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCGATGCCCAAAAGGCATaGGGTGTGGTGATGCATGAG +
Preference number: 2 (lower is better)
Translates to: LLFAPSERLRGGATLRDSDAQKA*GVVMHE
Trigger: CTCATGCATCACCACACCTCATGCCTTTTGGGCATC...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGCTGTTCGCACCATCTaGACGCCTGAGAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTAVRTI*TPERRG
Trigger: GCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTTCAAACCAACGCACATaGTGGGCTCACCGACCCTGT +
Preference number: 2 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVSNQRT*WAHRPC
Trigger: ACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTTTGA...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCTGGAAGCCTTCATCTTaGCCTCACCTGGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSWKPSS*PHLGSR
Trigger: CCTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCA...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCAGCCTGGGGTTACCTaGCCTGAGGCCATCCAAGGC +
Preference number: 2 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTQPGVT*PEAIQG
Trigger: GCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTG...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCGGTCCAAGGCACTGTTaGAGATCTGGCTACAGTGGC +
Preference number: 2 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESGPRHC*RSGYSG
Trigger: GCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACC...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CACAAACCTCATAGGCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGTGCTCCCTCCATGCCTaGGAGCAGGCACGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: HKPHRLCPEGCLQVFHDLCSLHA*EQARES
Trigger: ACTCTCTCGTGCCTGCTCCCAGGCATGGAGGGAGCA...CAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGCCTATGAGGTTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR CAA 90 bp ACCAGCTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTaGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCTGGCTA +
Preference number: 2 (lower is better)
Translates to: TSSATPTGHQPLLTQ*SMSPWSKALLEIWL
Trigger: TAGCCAGATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCGATGCCCAAAAGGCATaGGGTGTGGTGATGCATGAG +
Preference number: 2 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFDAQKA*GVVMHE
Trigger: CTCATGCATCACCACACCTCATGCCTTTTGGGCATC...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCCAGGAGATGGGGACATaGGAGATGCCCAAAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESQEMGT*EMPKRH
Trigger: ATGCCTTTTGGGCATCTCCCATGTCCCCATCTCCTG...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCAGGAGATGGGGACATaGGAGATGCCCAAAAGGCAT +
Preference number: 2 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSQEMGT*EMPKRH
Trigger: ATGCCTTTTGGGCATCTCCCATGTCCCCATCTCCTG...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCCTCAGCCTTCCTCCTTaGCACCTTCAGGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSLSLPP*HLQVMC
Trigger: GCACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAG...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCACACTTGTCTTGCAGTaGGAGCTCTTGGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSTLVLQ*ELLGLQ
Trigger: CTGCAGCCCCAAGAGCTCCCACTGCAAGACAAGTGT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCAGGTTGACATCAGCCTaGTCAGTTTGGGAGAGGACC +
Preference number: 2 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESRLTSA*SVWERT
Trigger: GGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCAGGTTGACATCAGCCTaGTCAGTTTGGGAGAGGACC +
Preference number: 2 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSRLTSA*SVWERT
Trigger: GGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCT...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 90 bp CCTCATAGGCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTaGGTTCCTCATCTCCGTCTCCTCCTCATCAAACGCGTACAGACT +
Preference number: 2 (lower is better)
Translates to: PHRLCPEGCLQVFHD*VPHLRLLLIKRVQT
Trigger: AGTCTGTACGCGTTTGATGAGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGCCTATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR-3UTR TCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACACCATCTGAACGCCTaGGAGGAGGGGCCACCCTTA +
Preference number: 2 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPHHLNA*EEGPPL
Trigger: TAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTTCTGGAACTGTTCTGTaGCAGCACATGGGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSSGTVL*QHMGAH
Trigger: ATGGGCACCCATGTGCTGGCACAGAACAGTTCCAGA...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR-3UTR GCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAGGCTCCCTCCATCATTaGTCCCCGTGCTACACAGGA +
Preference number: 2 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVGSLHH*SPCYTG
Trigger: TCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCC...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCCCAGTTTCCCTTGCCTaGTCTGCTGTTCGCACCATC +
Preference number: 2 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRPVSLA*SAVRTI
Trigger: GATGGTGCGAACAGCAGAGCAGGCAAGGGAAACTGG...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTGTGTCAGCCAGGCTTaGACTTGCTCAGATCCCTCC +
Preference number: 2 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRCVSQA*TCSDPS
Trigger: GGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACA...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTTCTGTGCCAGCACATaGGTGCCCATGGTAGGGGAT +
Preference number: 2 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHFCAST*VPMVGD
Trigger: ATCCCCTACCATGGGCACCCATGTGCTGGCACAGAA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCGTGTTAGAGAAGGGGTaGGAGGGCCTGAGCAATTTA +
Preference number: 2 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSVLEKG*EGLSNL
Trigger: TAAATTGCTCAGGCCCTCCCACCCCTTCTCTAACAC...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAATGTAGAGGGCAGCTCTaGCCCTCAGACCTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKCRGQL*PSDLSG
Trigger: TCCTGAGAGGTCTGAGGGCCAGAGCTGCCCTCTACA...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCACACTTGTCTTGCAGTaGGAGCTCTTGGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRTLVLQ*ELLGLQ
Trigger: CTGCAGCCCCAAGAGCTCCCACTGCAAGACAAGTGT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTAATAGTCAGGCCAGCTaGTTGCCAGCTTGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: VSGGLSSGLPRLGSSSPSNSQAS*LPACWG
Trigger: ACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATT...AGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR CAA 90 bp CCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTaGGAGATCTGGCTACAGTGGCATCTAGCACCAGAGCCACTGGCC +
Preference number: 2 (lower is better)
Translates to: PLLTQLSMSPWSKAL*EIWLQWHLAPEPLA
Trigger: GGCCAGTGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCAGGCATGAGGTGTGGTaGTGCATGAGGTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRRHEVW*CMRSVL
Trigger: CAAGACAGACCTCATGCATCACCACACCTCATGCCT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAGGCTCCCTCCATCATTaGTCCCCGTGCTACACAGGA +
Preference number: 2 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRGSLHH*SPCYTG
Trigger: TCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCC...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCGATGGCTTTGGTCCCTaGATCATCCTTCCAACATTG +
Preference number: 2 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFDGFGP*IILPTL
Trigger: CAATGTTGGAAGGATGATGCAGGGACCAAAGCCATC...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAAGGCTGGACAGAGGCTaGTGTGGCTTCTGCCTTGAA +
Preference number: 2 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKRLDRG*CGFCLE
Trigger: TTCAAGGCAGAAGCCACAGCAGCCTCTGTCCAGCCT...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTCCTCAGAATAATACCTaGGGCCAGGGCACAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLPQNNT*GQGTEG
Trigger: TCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGG...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCCTCAGAATAATACCTaGGGCCAGGGCACAGAAGGA +
Preference number: 2 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDPQNNT*GQGTEG
Trigger: TCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGG...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR-3UTR CCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAGAAGGTGGCAGTGGATaGGAGGACCAGAAGGAACCC +
Preference number: 2 (lower is better)
Translates to: HQSPLAITLSQGLGWKVREGGSG*EDQKEP
Trigger: GGGTTCCTTCTGGTCCTCCCATCCACTGCCACCTTC...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGAACCAACGCACATGCTaGGCTCACCGACCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTNQRTC*AHRPCV
Trigger: AACACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTT...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATTGCCAGACACGCTTGTaGAGCCCTCCCCTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: APSYSVEYESMVQGTVGDCQTRL*SPPLFP
Trigger: AGGGAACAGGGGAGGGCTCCACAAGCGTGTCTGGCA...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCGAGAAGGCTGAGCTCTaGAACAACGTATTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESEKAEL*NNVFVS
Trigger: GGACACAAATACGTTGTTCCAGAGCTCAGCCTTCTC...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 90 bp AAGAGGAAAGTTTGCCCCCAGGTCAATGTTCTGTTGAGCCTCCCCTaGAGAGAAGGGAGTCTGGATTCCCTCACCAGATTCCCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: KRKVCPQVNVLLSLP*REGSLDSLTRFPLR
Trigger: CCTGAGAGGGAATCTGGTGAGGGAATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTGGGGGCAAACTTTCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 90 bp CACAACCTCCCATCTTCCCCAACACTTGTCTTGCAGTGGGAGCTCTaGGGGCTGCAGATGCATATAGCCAAACTCTCTGCAGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: HNLPSSPTLVLQWEL*GLQMHIAKLSAAVL
Trigger: CAGAACAGCTGCAGAGAGTTTGGCTATATGCATCTGCAGCCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGGAAGATGGGAGGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAACTGCTACTCTGTCCTaGTGGCTTTGGTCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVTATLS*WLWSLH
Trigger: ATGCAGGGACCAAAGCCATCAGGACAGAGTAGCAGT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCCAGTCTCAAAGAAGATaGAAGGCCAACTCGGAACGT +
Preference number: 2 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSQSQRR*KANSER
Trigger: ACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTG...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTTTCAAGAGGAAAGTTTaGCCCCAGGTCAATGTTCTG +
Preference number: 2 (lower is better)
Translates to: GCCGFCLEASVREGVGGPFKRKV*PQVNVL
Trigger: CAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAA...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCATGTGTCAGCCAGGCTTaGACTTGCTCAGATCCCTCC +
Preference number: 2 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPCVSQA*TCSDPS
Trigger: GGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACA...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCATGGAAGCCTTCATCTTaGCCTCACCTGGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPWKPSS*PHLGSR
Trigger: CCTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCA...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACCCCCAACACTTGTCTTaGAGTGGGAGCTCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDPQHLS*SGSSWG
Trigger: GCCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGG...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 90 bp CTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATGTTCTGTaGAGCCTCCCCTTGAGAGAAGGGAGTCTGGATTCCCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: LFPFKRKVCPQVNVL*SLPLREGSLDSLTR
Trigger: TCTGGTGAGGGAATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACCACCAAGGCCAGCATaGGATGGACAAAATGGAAGG +
Preference number: 2 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPPPRPA*DGQNGR
Trigger: CCTTCCATTTTGTCCATCTCATGCTGGCCTTGGTGG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCCAGTCTCAAAGAAGATaGAAGGCCAACTCGGAACGT +
Preference number: 2 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRQSQRR*KANSER
Trigger: ACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTG...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGGAGTTGGATGCAAGTaGAAGGCAGAAGATAGGCAG +
Preference number: 2 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTGVGCK*KAEDRQ
Trigger: CTGCCTATCTTCTGCCTTTCACTTGCATCCAACTCC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCAGTCTTCTAGGACTGTaGATTAGTAGACAGGATGGA +
Preference number: 2 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFSLLGL*ISRQDG
Trigger: TCCATCCTGTCTACTAATCCACAGTCCTAGAAGACT...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGTCTTCCATGGTGGGTaGGAATGCCAGACACGCTTG +
Preference number: 2 (lower is better)
Translates to: APSYSVEYESMVQGTVGDVFHGG*ECQTRL
Trigger: CAAGCGTGTCTGGCATTCCCACCCACCATGGAAGAC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR-3UTR TCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGATGCCCAAAAGGCATaGGGTGTGGTGATGCATGAG +
Preference number: 2 (lower is better)
Translates to: APSYSVEYESMVQGTVGDDAQKA*GVVMHE
Trigger: CTCATGCATCACCACACCTCATGCCTTTTGGGCATC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACTCCAAGGCAACATTTaGGGTCACTGTCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRLQGNI*GHCLAS
Trigger: TGAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAACTTGGCACCTTCAGGTaGTGTGCTCCCCAGAGGATA +
Preference number: 2 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMELGTFR*CAPQRI
Trigger: TATCCTCTGGGGAGCACATCACCTGAAGGTGCCAAG...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACCTGAGGGGGTTAGGTTaGCATCAGCCTGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDLRGLG*HQPGQF
Trigger: AAACTGACCAGGCTGATGTCAACCTAACCCCCTCAG...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTCTGGAACTGTTCTGTaGCAGCACATGGGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDSGTVL*QHMGAH
Trigger: ATGGGCACCCATGTGCTGGCACAGAACAGTTCCAGA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTTTCAAGAGGAAAGTTTaGCCCCAGGTCAATGTTCTG +
Preference number: 2 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLFKRKV*PQVNVL
Trigger: CAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAA...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCTGGCTTCACAACAATaGCCAGGTGTCCAGGAGATG +
Preference number: 2 (lower is better)
Translates to: APSYSVEYESMVQGTVGDLASQQ*PGVQEM
Trigger: CATCTCCTGGACACCTGGCCATTGTTGTGAAGCCAG...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR-3UTR TCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAACTGCTACTCTGTCCTaGTGGCTTTGGTCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: GWEGLSNLYEVENYGMELTATLS*WLWSLH
Trigger: ATGCAGGGACCAAAGCCATCAGGACAGAGTAGCAGT...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAAAGGCATGAGGTGTGGTaGTGCATGAGGTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMERHEVW*CMRSVL
Trigger: CAAGACAGACCTCATGCATCACCACACCTCATGCCT...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCCTGAGCAATTTATATaGAGTAGAGAACTATGGGAT +
Preference number: 2 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVPEQFI*SRELWD
Trigger: ATCCCATAGTTCTCTACTTCATATAAATTGCTCAGG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACTCGGAACGTGGTATTaGATAAGAGCCTTGATGGAG +
Preference number: 2 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPLGTWY*IRALME
Trigger: CTCCATCAAGGCTCTTATTCAATACCACGTTCCGAG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAATTCCCTTGCCTGCTCTaGTGTTCGCACCATCTGAAC +
Preference number: 2 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEFPCLL*CSHHLN
Trigger: GTTCAGATGGTGCGAACAGCAGAGCAGGCAAGGGAA...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTAAACCAAGCACCAAATaGTTTAAATATCACCACCTC +
Preference number: 2 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVKPSTK*FKYHHL
Trigger: GAGGTGGTGATATTTAAACCATTTGGTGCTTGGTTT...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTACCTCAGAATAATACCTaGGGCCAGGGCACAGAAGGA +
Preference number: 2 (lower is better)
Translates to: GWEGLSNLYEVENYGMELPQNNT*GQGTEG
Trigger: TCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGG...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGAGAGGACTTGTGACATaGGAAACAGACACTGCTACT +
Preference number: 2 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTRGLVT*ETDTAT
Trigger: AGTAGCAGTGTCTGTTTCCCATGTCACAAGTCCTCT...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAGAGGACTTGTGACATaGGAAACAGACACTGCTACT +
Preference number: 2 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVRGLVT*ETDTAT
Trigger: AGTAGCAGTGTCTGTTTCCCATGTCACAAGTCCTCT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAATGAGATGGACAAAATaGAAGGTGGCAGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPMRWTK*KVAVDG
Trigger: CCCATCCACTGCCACCTTCCATTTTGTCCATCTCAT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAAGAGGACTTGTGACATaGGAAACAGACACTGCTACT +
Preference number: 2 (lower is better)
Translates to: RLGRASLKEDERPTRNVVRGLVT*ETDTAT
Trigger: AGTAGCAGTGTCTGTTTCCCATGTCACAAGTCCTCT...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGAACCCCTTGCAAGTTaGGCTGAAGAACCAAATTGG +
Preference number: 2 (lower is better)
Translates to: APSYSVEYESMVQGTVGDEPLAS*AEEPNW
Trigger: CCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAAGTGCTGCCCTCTGCTaGGGGGCTGTAGGGGACTCC +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGSAALC*GAVGDS
Trigger: GGAGTCCCCTACAGCCCCTCAGCAGAGGGCAGCACT...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATCATCATTGCTCCCCGTaGTACACAGGAACTCTGGAC +
Preference number: 2 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNHHCSP*YTGTLD
Trigger: GTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAATGGGAAACAGACACTaGTACTCTGTCCTGATGGCT +
Preference number: 2 (lower is better)
Translates to: GWEGLSNLYEVENYGMELMGNRH*YSVLMA
Trigger: AGCCATCAGGACAGAGTAGCAGTGTCTGTTTCCCAT...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp AAACGCGTACAGACTCTGCATCGCAGCCATGGAATTGATGCGGTCGATGTAATAAGAGAGTCCAGACTCTaGTTCTTTGTCTGTCTCCCA +
Preference number: 2 (lower is better)
Translates to: KRVQTLHRSHGIDAVDVIRESRL*FFVCLP
Trigger: TGGGAGACAGACAAAGAAGCAGAGTCTGGACTCTCT...TATTACATCGACCGCATCAATTCCATGGCTGCGATGCAGAGTCTGTACGCGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR-3UTR CCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGAAACCAAGCACCAAATaGTTTAAATATCACCACCTC +
Preference number: 2 (lower is better)
Translates to: AVDLSSLDLELFCASTWVKPSTK*FKYHHL
Trigger: GAGGTGGTGATATTTAAACCATTTGGTGCTTGGTTT...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR CAA 90 bp ACTAGAATATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTaGCCCCCAGGTCAATGTTCTGTTGAGCCTCCCCTTGAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: TRIYNASSVPIQEES*PPGQCSVEPPLERR
Trigger: CCTTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATATTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATGGGGTTACCTGGCCTaGGGCCATCCAAGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGWGYLA*GHPRQP
Trigger: AGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATTCCAAGTGGCCACCTaGAGGCTGGACAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGFQVAT*RLDRGC
Trigger: GCAGCCTCTGTCCAGCCTGCAGGTGGCCACTTGGAA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCCTGAGCAATTTATATaGAGTAGAGAACTATGGGAT +
Preference number: 2 (lower is better)
Translates to: APSYSVEYESMVQGTVGDPEQFI*SRELWD
Trigger: ATCCCATAGTTCTCTACTTCATATAAATTGCTCAGG...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGACATGGTGGGTGGGAATaGCAGACACGCTTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGHGGWE*QTRLWS
Trigger: GCTCCACAAGCGTGTCTGGCATTCCCACCCACCATG...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACAAACCAAGCACCAAATaGTTTAAATATCACCACCTC +
Preference number: 2 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDKPSTK*FKYHHL
Trigger: GAGGTGGTGATATTTAAACCATTTGGTGCTTGGTTT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGACCAGTTTCCCTTGCCTaGTCTGCTGTTCGCACCATC +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGPVSLA*SAVRTI
Trigger: GATGGTGCGAACAGCAGAGCAGGCAAGGGAAACTGG...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAAAAACCAAGCACCAAATaGTTTAAATATCACCACCTC +
Preference number: 2 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEKPSTK*FKYHHL
Trigger: GAGGTGGTGATATTTAAACCATTTGGTGCTTGGTTT...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGAGATCTGGCTACAGTaGCATCTAGCACCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGEIWLQ*HLAPEP
Trigger: TGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR TCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGACTCCAAGGCAACATTTaGGGTCACTGTCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGLQGNI*GHCLAS
Trigger: TGAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAG...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGAACCCCTTGCAAGTTaGGCTGAAGAACCAAATTGG +
Preference number: 2 (lower is better)
Translates to: NFTLATKLARETYLKVAGEPLAS*AEEPNW
Trigger: CCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR TCA 72 bp GGGAGCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTaGGGCCATCCAAGGCAGCCTCAGAATAATACCTGG +
Preference number: 3 (lower is better)
Translates to: GSRAPSAWGYLA*GHPRQPQNNTW
Trigger: CCAGGTATTATTCTGAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR-3UTR CAA 90 bp GCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGCAGCTGGTTGCCAGCTaGTTGGGGTCCTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: AVSGGLSSGLPRLGSSSPQLVAS*LGSSCS
Trigger: GGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTG...CGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR GCA 72 bp CCAACGCCAGTGGACACATGGTTCCAAGTGGCCACCTaGAGGCTGGACAGAGGCTGCTGTGGCTTCTGCCTT +
Preference number: 3 (lower is better)
Translates to: PTPVDTWFQVAT*RLDRGCCGFCL
Trigger: AAGGCAGAAGCCACAGCAGCCTCTGTCCAGCCTGCAGGTGGCCACTTGGAACCATGTGTCCACTGGCGTTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCAGCCAGGCTTGCACTaGCTCAGATCCCTCCCACCA +
Preference number: 3 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVQPGLH*LRSLPP
Trigger: TGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp TTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTaGTACACAGGAACTCTGGACAAGGCTGTGGACCTC +
Preference number: 3 (lower is better)
Translates to: FPLRGSLHHCSP*YTGTLDKAVDL
Trigger: GAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGG +
Preference number: 3 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRGLPPS*LPVLHR
Trigger: CCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCC...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCTCCCCAACACTTGTCTaGCAGTGGGAGCTCTTGGGG +
Preference number: 3 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESSPTLV*QWELLG
Trigger: CCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGGA...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp GAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTCCTCAGTCAGGCCAGCTGGTaGCCAGCTTGTTGGGGTCCT +
Preference number: 3 (lower is better)
Translates to: EGCLQVFHDLVPHLRLLLSQASW*PACWGP
Trigger: AGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACT...GAGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR-3UTR CAA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCCCTGAGGGGGTTAGGTaGACATCAGCCTGGTCAGTT +
Preference number: 3 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESPEGVR*TSAWSV
Trigger: AACTGACCAGGCTGATGTCAACCTAACCCCCTCAGG...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp CTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTaGTCCCCGTGCTACACAGGAACTCTGGACAAGGCT +
Preference number: 3 (lower is better)
Translates to: LTRFPLRGSLHH*SPCYTGTLDKA
Trigger: AGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp CCAGGATGGCCTCTTCACACCTGTGTCAGCCAGGCTTaGACTTGCTCAGATCCCTCCCACCAGAACACACAC +
Preference number: 3 (lower is better)
Translates to: PGWPLHTCVSQA*TCSDPSHQNTH
Trigger: GTGTGTGTTCTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACAGGTGTGAAGAGGCCATCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp GGAAGCCTTCATCTTGCCCTCACCTGGGTTCCAGGATaGCCTCTTCACACCTGTGTCAGCCAGGCTTGCACT +
Preference number: 3 (lower is better)
Translates to: GSLHLALTWVPG*PLHTCVSQACT
Trigger: AGTGCAAGCCTGGCTGACACAGGTGTGAAGAGGCCATCCTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp TTCCCTGCCCCTGAGGGGGTTAGGTTGACATCAGCCTaGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACC +
Preference number: 3 (lower is better)
Translates to: FPAPEGVRLTSA*SVWERTFRGLT
Trigger: GGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCTAACCCCCTCAGGGGCAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTaGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: LFPGAYPVFHGG*ECQTRLWSPPL
Trigger: CAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGG +
Preference number: 3 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPGLPPS*LPVLHR
Trigger: CCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCC...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTCCTCATCAACTGGTTGCCAGCTTGTaGGGGTCCTCCTGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: LSSGLPRLGSSSPSPPHQLVASL*GSSCSL
Trigger: GAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAG...TTGATGAGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR TCA 72 bp GGGACATGGGAGATGCCCAAAAGGCATGAGGTGTGGTaGTGCATGAGGTCTGTCTTGAGCCCCTCGCCAGAT +
Preference number: 3 (lower is better)
Translates to: GTWEMPKRHEVW*CMRSVLSPSPD
Trigger: ATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACCTCATGCCTTTTGGGCATCTCCCATGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp TGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTaGCAGCACATGGGTGCCCATGGTAGGGGATGGGGA +
Preference number: 3 (lower is better)
Translates to: CGPLQSRSGTVL*QHMGAHGRGWG
Trigger: TCCCCATCCCCTACCATGGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
3UTR GCA 72 bp ATTGATGCGGTCGATGTAATAGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGC +
Preference number: 3 (lower is better)
Translates to: IDAVDVIVRPAG*QLVGVLLLPPC
Trigger: GCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATTACATCGACCGCATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR CCA 72 bp CCTGAGGGGGTTAGGTTGACATCAGCCTGGTCAGTTTaGGAGAGGACCTTTAGAGGCCTCACCCACAACCTC +
Preference number: 3 (lower is better)
Translates to: PEGVRLTSAWSV*ERTFRGLTHNL
Trigger: GAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCTAACCCCCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp CCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTaGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: PFVSRCVSSLPW*VGMPDTLVEPS
Trigger: GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp TGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTaGTTCCTCATCTCCGTCTCCTCCTCATCAAACGCG +
Preference number: 3 (lower is better)
Translates to: CVRRAVFRSSTT*FLISVSSSSNA
Trigger: CGCGTTTGATGAGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR-3UTR CAA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGTTGAGCCTCCCCTaGAGAGAAGGGAGTCTGGAT +
Preference number: 3 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHLLSLP*REGSLD
Trigger: ATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTCTGTTGAGCCTCCCCTaGAGAGAAGGGAGTCTGGAT +
Preference number: 3 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLLLSLP*REGSLD
Trigger: ATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAG...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCAGGTCAATGTTCTGTaGAGCCTCCCCTTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVQVNVL*SLPLRE
Trigger: TTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTTGCATGAGGTCTGTCTaGAGCCCCTCGCCAGATTCA +
Preference number: 3 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLCMRSV*SPSPDS
Trigger: TGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCA...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR TCA 72 bp TGGGATGGAGCTAAGCATTCAAGTGCTGCCCTCTGCTaGGGGGCTGTAGGGGACTCCAAGGCAACATTTGAG +
Preference number: 3 (lower is better)
Translates to: WDGAKHSSAALC*GAVGDSKATFE
Trigger: CTCAAATGTTGCCTTGGAGTCCCCTACAGCCCCTCAGCAGAGGGCAGCACTTGAATGCTTAGCTCCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp TGGTTCCAAGTGGCCACCTGCAGGCTGGACAGAGGCTaGTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAA +
Preference number: 3 (lower is better)
Translates to: WFQVATCRLDRG*CGFCLEASVRE
Trigger: TTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCCTCTGTCCAGCCTGCAGGTGGCCACTTGGAACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATaGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCC +
Preference number: 3 (lower is better)
Translates to: SPFVSRCVSSLP*WVGMPDTLVEP
Trigger: GGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp CCATGGTCCAAGGCACTGTTGGAGATCTGGCTACAGTaGCATCTAGCACCAGAGCCACTGGCCAGATGTAGA +
Preference number: 3 (lower is better)
Translates to: PWSKALLEIWLQ*HLAPEPLARCR
Trigger: TCTACATCTGGCCAGTGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCATGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp AGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCTaGCTACAGTGGCATCTAGCACCAGAGCCACTGGCC +
Preference number: 3 (lower is better)
Translates to: SMSPWSKALLEI*LQWHLAPEPLA
Trigger: GGCCAGTGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCATGGACTCATACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTTCTGTCCTGATGGCTTaGGTCCCTGCATCATCCTTC +
Preference number: 3 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLSVLMA*VPASSF
Trigger: GAAGGATGATGCAGGGACCAAAGCCATCAGGACAGA...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGTCTCAGCCTTCCTCCTaGGCACCTTCAGGTGATGTG +
Preference number: 3 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTSQPSS*APSGDV
Trigger: CACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAGA...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTTTGCAGTGGGAGCTCTaGGGGCTGCAGATGCATATA +
Preference number: 3 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLLQWEL*GLQMHI
Trigger: TATATGCATCTGCAGCCCCAAGAGCTCCCACTGCAA...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR TCA 72 bp ATGGGAGGACCAGAAGGAACCCCTTGCAAGTTGGGCTaGAGAACCAAATTGGGTACCAGAAATGGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: MGGPEGTPCKLG*RTKLGTRNGVA
Trigger: GGCCACCCCATTTCTGGTACCCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTCCTTCTGGTCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp GCTCTTGGGGCTGCAGATGCATATAGCCAAACTCTCTaGAGCTGTTCTGCCTGGAAGCCTTCATCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: ALGAADAYSQTL*SCSAWKPSSCP
Trigger: AGGGCAAGATGAAGGCTTCCAGGCAGAACAGCTGCAGAGAGTTTGGCTATATGCATCTGCAGCCCCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTATTCAAGAGGAAAGTTaGCCCCCAGGTCAATGTTCT +
Preference number: 3 (lower is better)
Translates to: GCCGFCLEASVREGVGGPIQEES*PPGQCS
Trigger: AGAACATTGACCTGGGGGCAAACTTTCCTCTTGAAT...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGTCTGTCCTGATGGCTTaGGTCCCTGCATCATCCTTC +
Preference number: 3 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTSVLMA*VPASSF
Trigger: GAAGGATGATGCAGGGACCAAAGCCATCAGGACAGA...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTACTCCAAGGCAACATTaGAGGTCACTGTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLTPRQH*RSLSGF
Trigger: GAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAGT...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTCTCCCCAGTTTCCCTaGCCTGCTCTGCTGTTCGCA +
Preference number: 3 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDSPQFP*PALLFA
Trigger: TGCGAACAGCAGAGCAGGCAAGGGAAACTGGGGAGA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR TCA 72 bp CAAACGCGTACAGACTCTGCATCGCAGCCATGGAATTaGTGCGGTCGATGTAATAGTCAGGCCAGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: QTRTDSASQPWN*CGRCNSQASWL
Trigger: CAACCAGCTGGCCTGACTATTACATCGACCGCATCAATTCCATGGCTGCGATGCAGAGTCTGTACGCGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR CCA 72 bp AGTGGATGGGAGGACCAGAAGGAACCCCTTGCAAGTTaGGCTGAAGAACCAAATTGGGTACCAGAAATGGGG +
Preference number: 3 (lower is better)
Translates to: SGWEDQKEPLAS*AEEPNWVPEMG
Trigger: CCCCATTTCTGGTACCCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTCCTTCTGGTCCTCCCATCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp CACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATaGTCCAAGGCACTGTTGGAGATCTGGCTACAGTGG +
Preference number: 3 (lower is better)
Translates to: HQPLLTQLSMSP*SKALLEIWLQW
Trigger: CCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CCA 72 bp AAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTaGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAG +
Preference number: 3 (lower is better)
Translates to: KQPIKDQLSHPD*APAPSYSVEYE
Trigger: CTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAACCAGAAGGAACCCCTaGCAAGTTGGGCTGAAGAAC +
Preference number: 3 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPTRRNP*QVGLKN
Trigger: GTTCTTCAGCCCAACTTGCAAGGGGTTCCTTCTGGT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCATTGCAGTGGGAGCTCTaGGGGCTGCAGATGCATATA +
Preference number: 3 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPLQWEL*GLQMHI
Trigger: TATATGCATCTGCAGCCCCAAGAGCTCCCACTGCAA...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCGTCCTCTGTCAACAGTaGAACCAAATTCTGCTTTTC +
Preference number: 3 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESVLCQQ*NQILLF
Trigger: GAAAAGCAGAATTTGGTTCAACTGTTGACAGAGGAC...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp GCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGGAGAATCCTATTTCTTaGAGTGTAAGCTCCAGGACA +
Preference number: 3 (lower is better)
Translates to: AVSGGLSSGLPRLGSSSPENPIS*SVSSRT
Trigger: TGTCCTGGAGCTTACACTCAAAGAAATAGGATTCTC...CGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
3UTR-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACAGGTCAATGTTCTGTaGAGCCTCCCCTTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPQVNVL*SLPLRE
Trigger: TTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCATCATCCTTCCAACATaGACTGTTCTCTGGAACCTA +
Preference number: 3 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSIILPT*TVLWNL
Trigger: TAGGTTCCAGAGAACAGTCAATGTTGGAAGGATGAT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGCTGTGGCTTCTGCCTaGAAGCTAGTGTTAGAGAAG +
Preference number: 3 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPAVASA*KLVLEK
Trigger: CTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGC...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATACCAGAAGGAACCCCTaGCAAGTTGGGCTGAAGAAC +
Preference number: 3 (lower is better)
Translates to: APSYSVEYESMVQGTVGDTRRNP*QVGLKN
Trigger: GTTCTTCAGCCCAACTTGCAAGGGGTTCCTTCTGGT...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACACTCCAAGGCAACATTaGAGGTCACTGTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDTPRQH*RSLSGF
Trigger: GAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAGT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp ATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTaGCCCCAGGTCAATGTTCTGTTGAGCCTCCCCTTG +
Preference number: 3 (lower is better)
Translates to: IMPPLFPFKRKV*PQVNVLLSLPL
Trigger: CAAGGGGAGGCTCAACAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAATTCAAGAGGAAAGTTaGCCCCCAGGTCAATGTTCT +
Preference number: 3 (lower is better)
Translates to: RLGRASLKEDERPTRNVVIQEES*PPGQCS
Trigger: AGAACATTGACCTGGGGGCAAACTTTCCTCTTGAAT...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR GCA 72 bp ATCTTGAACAGCTTCCATAGTCCTTTTGTTTCCAGGTaGGTATCCAGTCTTCCATGGTGGGTGGGAATGCCA +
Preference number: 3 (lower is better)
Translates to: ILNSFHSPFVSR*VSSLPWWVGMP
Trigger: TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACTATGGAAGCTGTTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGG +
Preference number: 3 (lower is better)
Translates to: NFTLATKLARETYLKVAGGLPPS*LPVLHR
Trigger: CCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAAGGGCCAAGAGCTCATaGATGGTAGAGGTTAGGCAG +
Preference number: 3 (lower is better)
Translates to: NFTLATKLARETYLKVAGRAKSS*MVEVRQ
Trigger: CTGCCTAACCTCTACCATCAATGAGCTCTTGGCCCT...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR-3UTR CAA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATCTGGAACAACGTATTaGTGTCCTCTGTCAACAGTT +
Preference number: 3 (lower is better)
Translates to: NFTLATKLARETYLKVAGSGTTY*CPLSTV
Trigger: AACTGTTGACAGAGGACACAAATACGTTGTTCCAGA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR TCA 72 bp CTCTGGAACAACGTATTTGTGTCCTCTGTCAACAGTTaGACCAAATTCTGCTTTTCTGAAGATCAAATGTAT +
Preference number: 3 (lower is better)
Translates to: LWNNVFVSSVNS*TKFCFSEDQMY
Trigger: ATACATTTGATCTTCAGAAAAGCAGAATTTGGTTCAACTGTTGACAGAGGACACAAATACGTTGTTCCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCGGAAGACAAGGTGAGTaGGCCCCCAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLGRQGE*APRGWW
Trigger: CCACCACCCCCTGGGGGCCCACTCACCTTGTCTTCC...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCAATGGCCTCAGGCTGTaGCAGCACATGTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLNGLRL*QHMCPP
Trigger: GGGCGGGCACATGTGCTGGCACAGCCTGAGGCCATT...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCGTGGGACGTCACTGCTaGGGTAGGGGTCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLVGRHC*GRGPEG
Trigger: TCCCTCAGGACCCCTACCCCAGCAGTGACGTCCCAC...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCCTCAGCCACCCCGACTaGGCACCAGCCCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLLSHPD*APAPSY
Trigger: GTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCTGTCAGCGATCTTGTTaGGGCTGGCCACCCGGAACC +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLCQRSC*GWPPGT
Trigger: GGTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACA...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCCACCATCTGAACGCCTaGGAGGAGGGGCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLHHLNA*EEGPPL
Trigger: TAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTG...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACGGGGGCCATGGTCACTaGAGGCCAGGGGGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHGGHGH*RPGGVS
Trigger: GCTGACGCCCCCTGGCCTGCAGTGACCATGGCCCCC...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGGGGGCCATGGTCACTaGAGGCCAGGGGGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLGGHGH*RPGGVS
Trigger: GCTGACGCCCCCTGGCCTGCAGTGACCATGGCCCCC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCATGGCCTCTAGATCCTaGCGGGCCTCTGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLMASRS*RASEKA
Trigger: GGCCTTCTCAGAGGCCCGGCAGGATCTAGAGGCCAT...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCTGCGACCGCAGGTGCTaGGAGCCCCAGAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSCDRRC*EPQSPG
Trigger: CCCCGGACTCTGGGGCTCTCAGCACCTGCGGTCGCA...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCGGGGGCCATGGTCACTaGAGGCCAGGGGGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFGGHGH*RPGGVS
Trigger: GCTGACGCCCCCTGGCCTGCAGTGACCATGGCCCCC...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTGCCTGGCGCAGCTCCTaGGACTCCCGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVAWRSS*DSRASL
Trigger: CAAGCTGGCCCGGGAGTCCCAGGAGCTGCGCCAGGC...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCCTGGGTGCTCCCTCCATGCCTaGGAGCAGGCACGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: QASWLPACWGPPAPSMPGCSLHA*EQARES
Trigger: ACTCTCTCGTGCCTGCTCCCAGGCATGGAGGGAGCA...CCCAGGCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR TCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCAGGGCCTGGCTCCCTaGTCGCTTGCGGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSQGLAP*SLAAAL
Trigger: AAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTG...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCGGTAAAGTCAGGGCATaGGGTTGGTTTGCGACCGCA +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLGKVRA*GWFATA
Trigger: TGCGGTCGCAAACCAACCTCATGCCCTGACTTTACC...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTCCTGGGGGCCATGGTCACTaGAGGCCAGGGGGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GGLSSGLPRLGSSSPSPPGGHGH*RPGGVS
Trigger: GCTGACGCCCCCTGGCCTGCAGTGACCATGGCCCCC...AGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCGAAGCGGGTTCGCTCTaGTGCATACACCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLEAGSL*CIHLVV
Trigger: CACTACCAGGTGTATGCAGCAGAGCGAACCCGCTTC...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGGAGGGGCAGGCCCATaGCGAGGCAAGGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVGGAGP*RGKVGH
Trigger: GTGCCCCACCTTGCCTCGGCATGGGCCTGCCCCTCC...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGGAGGGGCAGGCCCATaGCGAGGCAAGGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPGGAGP*RGKVGH
Trigger: GTGCCCCACCTTGCCTCGGCATGGGCCTGCCCCTCC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCGGAGGGGCAGGCCCATaGCGAGGCAAGGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSGGAGP*RGKVGH
Trigger: GTGCCCCACCTTGCCTCGGCATGGGCCTGCCCCTCC...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTCAGCATGGCTTCCATaGGCGCCCGCCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLSAWLP*APAAPP
Trigger: AGGAGGAGCGGCGGGCGCGCATGGAAGCCATGCTGA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCACCTTCCGCTGCCGCTaGCACCGCTCACGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSTFRCR*HRSRSL
Trigger: GAGGGAACGTGAGCGGTGGCAGCGGCAGCGGAAGGT...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGACCTTCCGCTGCCGCTaGCACCGCTCACGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLTFRCR*HRSRSL
Trigger: GAGGGAACGTGAGCGGTGGCAGCGGCAGCGGAAGGT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCCCTCCTCCAGCGAGCTaGCTGCAGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSPPPAS*LQPGPS
Trigger: GGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAGGAGG...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGACTTGTCCCCGAGCCTaGCGCAGCTCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLTCPRA*RSSWDS
Trigger: GGAGTCCCAGGAGCTGCGCCAGGCTCGGGGACAAGT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGCCCCCAGGGGGTGGTaGGGAAGATACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLAPRGW*GRYRAC
Trigger: ACAGGCCCTGTATCTTCCCCACCACCCCCTGGGGGC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCCTGGCCTCATTTAGCTaGTCCTCCAGCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLLASFS*SSSSEK
Trigger: CTTCTCCGAGCTGGAGGACCAGCTAAATGAGGCCAG...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCGGAGTAGGGAGAGGCTaGAACAGACCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLGVGRG*NRPFPI
Trigger: AATGGGGAAGGGTCTGTTCCAGCCTCTCCCTACTCC...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCCTGGGGGCTGGAGAACTCCATaGACTGCAGAGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QASWLPACWGPPAPSMPGGWRTP*TAEGGC
Trigger: ACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCC...CCCAGGCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR TCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCCAGGGCCTGGCTCCCTaGTCGCTTGCGGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPQGLAP*SLAAAL
Trigger: AAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTG...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCAGTGCTGCCCTCTGCTaGGGGGCTGTAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESSAALC*GAVGDS
Trigger: GGAGTCCCCTACAGCCCCTCAGCAGAGGGCAGCACT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTGCGACCGCAGGTGCTaGGAGCCCCAGAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSCDRRC*EPQSPG
Trigger: CCCCGGACTCTGGGGCTCTCAGCACCTGCGGTCGCA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCCTCCAGCGAGCTGCCTaGAGCCAGGACCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESLQRAA*SQDLPL
Trigger: CAGCGGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAG...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCAGGAAGCCCAGGCCATaGTGGCTCCTCTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFRKPRP*WLLLRG
Trigger: CCCCCGCAAGAGGAGCCACCATGGCCTGGGCTTCCT...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCAATAGTCAGGCCAGCTaGTTGCCAGCTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLNSQAS*LPACWG
Trigger: ACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATT...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCTGCGGCTCTCACAGGTaGCGTGGTCCATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSCGSHR*RGPCSG
Trigger: TCCGGAGCATGGACCACGCCACCTGTGAGAGCCGCA...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATGCCTGGCGCAGCTCCTaGGACTCCCGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDAWRSS*DSRASL
Trigger: CAAGCTGGCCCGGGAGTCCCAGGAGCTGCGCCAGGC...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCGGAAGACAAGGTGAGTaGGCCCCCAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESGRQGE*APRGWW
Trigger: CCACCACCCCCTGGGGGCCCACTCACCTTGTCTTCC...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCATGCCGAGGCAAGGTaGGGCACCTGGGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSHAEAR*GTWGSR
Trigger: CCGACTCCCCCAGGTGCCCCACCTTGCCTCGGCATG...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCACGCTTTTTCCTGAGTaGGACGTCACTGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLTLFPE*DVTAGV
Trigger: TACCCCAGCAGTGACGTCCCACTCAGGAAAAAGCGT...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCAGGATGATGCAGTTTTaGGCCCTCCGGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLRMMQF*ALRPSM
Trigger: CATTGATGGCCGGAGGGCCCAAAACTGCATCATCCT...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCGCGTGGGGAGACACCTaGTCCAGCCACACACAGCCC +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSAWGDT*SSHTQP
Trigger: GGGCTGTGTGTGGCTGGACCAGGTGTCTCCCCACGC...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCGCGTGGGGAGACACCTaGTCCAGCCACACACAGCCC +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESAWGDT*SSHTQP
Trigger: GGGCTGTGTGTGGCTGGACCAGGTGTCTCCCCACGC...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTCTCTCAGGCCCCTCCTaGGGTTGCCCACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPLSGPS*GCPPPS
Trigger: AGAAGGAGGTGGGCAACCTCAGGAGGGGCCTGAGAG...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCCTCTCAGGCCCCTCCTaGGGTTGCCCACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFLSGPS*GCPPPS
Trigger: AGAAGGAGGTGGGCAACCTCAGGAGGGGCCTGAGAG...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTTGGGGTTACCTGGCCTaGGGCCATCCAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVWGYLA*GHPRQP
Trigger: AGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCA...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCCTCCAAGGCAACATTTaGGGTCACTGTCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLLQGNI*GHCLAS
Trigger: TGAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAG...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTAGTGCTGCCCTCTGCTaGGGGGCTGTAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSSAALC*GAVGDS
Trigger: GGAGTCCCCTACAGCCCCTCAGCAGAGGGCAGCACT...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCAGTGCTGCCCTCTGCTaGGGGGCTGTAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSAALC*GAVGDS
Trigger: GGAGTCCCCTACAGCCCCTCAGCAGAGGGCAGCACT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCGGAGTTGGATGCAAGTaGAAGGCAGAAGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLGVGCK*KAEDRQ
Trigger: CTGCCTATCTTCTGCCTTTCACTTGCATCCAACTCC...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGGAGGGGCAGGCCCATaGCGAGGCAAGGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTGGAGP*RGKVGH
Trigger: GTGCCCCACCTTGCCTCGGCATGGGCCTGCCCCTCC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCTGCATCTTGCTGTCATaGTCCCCGAAGTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLCILLS*SPKCIK
Trigger: CTTGATGCACTTCGGGGAGCATGACAGCAAGATGCA...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCACCTTCCGCTGCCGCTaGCACCGCTCACGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVTFRCR*HRSRSL
Trigger: GAGGGAACGTGAGCGGTGGCAGCGGCAGCGGAAGGT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTACCTTCCGCTGCCGCTaGCACCGCTCACGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSTFRCR*HRSRSL
Trigger: GAGGGAACGTGAGCGGTGGCAGCGGCAGCGGAAGGT...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCCAGCGAGCTGCCTaGAGCCAGGACCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSLQRAA*SQDLPL
Trigger: CAGCGGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCCCTCCTCCAGCGAGCTaGCTGCAGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSPPPAS*LQPGPS
Trigger: GGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAGGAGG...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTTCCAAGTGGCCACCTaGAGGCTGGACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLFQVAT*RLDRGC
Trigger: GCAGCCTCTGTCCAGCCTGCAGGTGGCCACTTGGAA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGCCTGGCGCAGCTCCTaGGACTCCCGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKAWRSS*DSRASL
Trigger: CAAGCTGGCCCGGGAGTCCCAGGAGCTGCGCCAGGC...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGCCTGGCGCAGCTCCTaGGACTCCCGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTAWRSS*DSRASL
Trigger: CAAGCTGGCCCGGGAGTCCCAGGAGCTGCGCCAGGC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTACTTGTCCCCGAGCCTaGCGCAGCTCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSTCPRA*RSSWDS
Trigger: GGAGTCCCAGGAGCTGCGCCAGGCTCGGGGACAAGT...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGCCCCCAGGGGGTGGTaGGGAAGATACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVAPRGW*GRYRAC
Trigger: ACAGGCCCTGTATCTTCCCCACCACCCCCTGGGGGC...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTGGAAGACAAGGTGAGTaGGCCCCCAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSGRQGE*APRGWW
Trigger: CCACCACCCCCTGGGGGCCCACTCACCTTGTCTTCC...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCATGCCGAGGCAAGGTaGGGCACCTGGGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHHAEAR*GTWGSR
Trigger: CCGACTCCCCCAGGTGCCCCACCTTGCCTCGGCATG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGCCTTCCTCCTCCTCATaGCCTCTAGATCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLPSSSS*PLDPAG
Trigger: CCCGGCAGGATCTAGAGGCCATGAGGAGGAGGAAGG...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACTGCCAGACACGCTTGTaGAGCCCTCCCCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHCQTRL*SPPLFP
Trigger: AGGGAACAGGGGAGGGCTCCACAAGCGTGTCTGGCA...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp CCTGCAGGCTGGACAGAGGCTGCTGTGGCTTCTGCCTaGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PAGWTEAAVASA*KLVLEKGWEGL
Trigger: CAGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCCTCTGTCCAGCCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGGTTGTCCCGGAGGTTaGTTTCGGGGATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLGCPGG*FRGCHC
Trigger: GCAGTGACATCCCCGAAATCAACCTCCGGGACAACC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp ATAGTCAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCCTGCAAAGCGGATGTTaGGCTCCTCTGCGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: IVRPAGCQLVGVLLLPPCLQSGC*APLRSG
Trigger: TCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAG...GCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR TCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGGACACGCTTTTTCCTaGGTGGGACGTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLGHAFS*VGRHCW
Trigger: CCAGCAGTGACGTCCCACTCAGGAAAAAGCGTGTCC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCCTCTCAGGCCCCTCCTaGGGTTGCCCACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVLSGPS*GCPPPS
Trigger: AGAAGGAGGTGGGCAACCTCAGGAGGGGCCTGAGAG...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTATCCTGCCGGGCCTCTaGGAAGGCCTGCAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPILPGL*EGLQEG
Trigger: ACCTTCTTGCAGGCCTTCTCAGAGGCCCGGCAGGAT...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTACAGGGCCTGGCTCCCTaGTCGCTTGCGGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVQGLAP*SLAAAL
Trigger: AAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTG...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGCTGTTCGCACCATCTaGACGCCTGAGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPAVRTI*TPERRG
Trigger: GCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCAATGGCCTCAGGCTGTaGCAGCACATGTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPNGLRL*QHMCPP
Trigger: GGGCGGGCACATGTGCTGGCACAGCCTGAGGCCATT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAATGGCCTCAGGCTGTaGCAGCACATGTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSNGLRL*QHMCPP
Trigger: GGGCGGGCACATGTGCTGGCACAGCCTGAGGCCATT...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCGCGGGTTCGCTCTGCTaGATACACCTGGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSAGSLC*IHLVVQ
Trigger: CTGCACTACCAGGTGTATGCAGCAGAGCGAACCCGC...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGCGGGTTCGCTCTGCTaGATACACCTGGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLAGSLC*IHLVVQ
Trigger: CTGCACTACCAGGTGTATGCAGCAGAGCGAACCCGC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTTCCACTTTGGGCTTTaGCTCAGCCAGCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLFHFGL*LSQPLL
Trigger: CAGGAGCGGCTGGCTGAGGCAAAGCCCAAAGTGGAA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTCAGCATGGCTTCCATaGGCGCCCGCCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHSAWLP*APAAPP
Trigger: AGGAGGAGCGGCGGGCGCGCATGGAAGCCATGCTGA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATTCAGCATGGCTTCCATaGGCGCCCGCCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDSAWLP*APAAPP
Trigger: AGGAGGAGCGGCGGGCGCGCATGGAAGCCATGCTGA...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCTCCTCCAGCGAGCTaGCTGCAGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVPPPAS*LQPGPS
Trigger: GGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAGGAGG...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTAGGAAGCCCAGGCCATaGTGGCTCCTCTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSRKPRP*WLLLRG
Trigger: CCCCCGCAAGAGGAGCCACCATGGCCTGGGCTTCCT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CTCATCTCCGTCTCCTCCTCATCAAACGCGTACAGACTCTGCATCGCAGCCATGAGGAAGCCCAGGCCATaGTGGCTCCTCTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LISVSSSSNAYRLCIAAMRKPRP*WLLLRG
Trigger: CCCCCGCAAGAGGAGCCACCATGGCCTGGGCTTCCT...CATGGCTGCGATGCAGAGTCTGTACGCGTTTGATGAGGAGGAGACGGAGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCACTTGTCCCCGAGCCTaGCGCAGCTCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRTCPRA*RSSWDS
Trigger: GGAGTCCCAGGAGCTGCGCCAGGCTCGGGGACAAGT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATGCCCCCAGGGGGTGGTaGGGAAGATACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDAPRGW*GRYRAC
Trigger: ACAGGCCCTGTATCTTCCCCACCACCCCCTGGGGGC...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCATGCCGAGGCAAGGTaGGGCACCTGGGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQHAEAR*GTWGSR
Trigger: CCGACTCCCCCAGGTGCCCCACCTTGCCTCGGCATG...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTTCCTCCTCCTCATaGCCTCTAGATCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSPSSSS*PLDPAG
Trigger: CCCGGCAGGATCTAGAGGCCATGAGGAGGAGGAAGG...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCGTAACTTCCAGGGCCTaGCTCCCTGATCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSVTSRA*LPDRLR
Trigger: CCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGTTAC...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCCAGCCTGGGGTTACCTaGCCTGAGGCCATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPQPGVT*PEAIQG
Trigger: GCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTG...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCTGCCAGACACGCTTGTaGAGCCCTCCCCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESCQTRL*SPPLFP
Trigger: AGGGAACAGGGGAGGGCTCCACAAGCGTGTCTGGCA...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCGAGAAGGCTGAGCTCTaGAACAACGTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLEKAEL*NNVFVS
Trigger: GGACACAAATACGTTGTTCCAGAGCTCAGCCTTCTC...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGGAACTCTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPS*LPVLHRNSGQG
Trigger: GCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCCTGGGTCGCAGCCATGGAATTaGTGCGGTCGATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: QASWLPACWGPPAPSMPGSQPWN*CGRCNS
Trigger: ACTATTACATCGACCGCATCAATTCCATGGCTGCGA...CCCAGGCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR TCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTGATGCAGCCAATGAGTaGGGTGTGGATGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPDAANE*GVDAAL
Trigger: GAGAGCCGCATCCACACCTCACTCATTGGCTGCATC...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCAAGGACTTCAGTGGGTaGGAAGGCTGGGGGACACGC +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVKDFSG*EGWGTR
Trigger: GCGTGTCCCCCAGCCTTCTCACCCACTGAAGTCCTT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAAGGACTTCAGTGGGTaGGAAGGCTGGGGGACACGC +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSKDFSG*EGWGTR
Trigger: GCGTGTCCCCCAGCCTTCTCACCCACTGAAGTCCTT...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTGGGGTTACCTGGCCTaGGGCCATCCAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHWGYLA*GHPRQP
Trigger: AGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTGGGGTTACCTGGCCTaGGGCCATCCAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSWGYLA*GHPRQP
Trigger: AGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCGCTGTTCGCACCATCTaGACGCCTGAGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRAVRTI*TPERRG
Trigger: GCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGC...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCGTACCTGGCGCCTCTaGTACTCCAGCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHRTWRL*YSSTST
Trigger: GGTGGAGGTGCTGGAGTATCAGAGGCGCCAGGTACG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538976.5
CDS-3UTR GCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGGGGGCCATGGTCACTaGAGGCCAGGGGGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDGGHGH*RPGGVS
Trigger: GCTGACGCCCCCTGGCCTGCAGTGACCATGGCCCCC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGAGAACTCCATGAACTaGAGAGGGTGGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLENSMN*RGWLSR
Trigger: CCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTGATGTTGAGCTCCTCTaGGTTCGGGATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPDVELL*VRDGAG
Trigger: TCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATC...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTAATGGCCTCAGGCTGTaGCAGCACATGTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLNGLRL*QHMCPP
Trigger: GGGCGGGCACATGTGCTGGCACAGCCTGAGGCCATT...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTTCCTGGAGGACAATCTaGTGGAGGATGCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVSWRTI*WRMRSR
Trigger: CCTGGACCGCATCCTCCAGCAGATTGTCCTCCAGGA...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCTCAATTTCATGCTTGTaGTCCTCCAGGAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLSISCL*SSRRSM
Trigger: CATTGACCTCCTGGAGGAGCACAAGCATGAAATTGA...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCCGTCTGGCTGCATCTTaGTGTCATGCTCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSRLAAS*CHAPRS
Trigger: ACTTCGGGGAGCATGACAGCAAGATGCAGCCAGACG...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTATGGCCTCTAGATCCTaGCGGGCCTCTGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSMASRS*RASEKA
Trigger: GGCCTTCTCAGAGGCCCGGCAGGATCTAGAGGCCAT...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCGCTCACGTTCCCTCTaGTCCTTCAGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVRSRSL*SFSMAS
Trigger: GGAAGCCATGCTGAAGGAGCAGAGGGAACGTGAGCG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGCTCCAGCGAGCTGCCTaGAGCCAGGACCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGELQRAA*SQDLPL
Trigger: CAGCGGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAG...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCCTCCTCCAGCGAGCTaGCTGCAGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQPPPAS*LQPGPS
Trigger: GGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAGGAGG...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCGGCTCCCTCCATCATTaGTCCCCGTGCTACACAGGA +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESGSLHH*SPCYTG
Trigger: TCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCC...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCTTCAAGAGGAAAGTTTaGCCCCAGGTCAATGTTCTG +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLFKRKV*PQVNVL
Trigger: CAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAA...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGCTGGACAGAGGCTaGTGTGGCTTCTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHRLDRG*CGFCLE
Trigger: TTCAAGGCAGAAGCCACAGCAGCCTCTGTCCAGCCT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGCCAGTTTCCCTTGCCTaGTCTGCTGTTCGCACCATC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLPVSLA*SAVRTI
Trigger: GATGGTGCGAACAGCAGAGCAGGCAAGGGAAACTGG...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACTGGAAGCCTTCATCTTaGCCTCACCTGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHWKPSS*PHLGSR
Trigger: CCTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCA...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCTCATCTCCGTCTCCTCCTCATCAAACGCGTACAGACTCTGCATCGCAGCCATCTCCTGCTCCCTCCATaGCTGGGAGCAGGCACGAGA +
Preference number: 4 (lower is better)
Translates to: PHLRLLLIKRVQTLHRSHLLLPP*LGAGTR
Trigger: TCTCGTGCCTGCTCCCAGGCATGGAGGGAGCAGGAG...ATGGCTGCGATGCAGAGTCTGTACGCGTTTGATGAGGAGGAGACGGAGATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp TCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTTTGTTGGGGTCCTCCTaGTCCCTCCATGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGGLSSGLPRLGSSSPSPLLGSS*SLHAWE
Trigger: CTCCCAGGCATGGAGGGAGCAGGAGGACCCCAACAA...AGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGAGGAAGCCCAGGCCATaGTGGCTCCTCTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQRKPRP*WLLLRG
Trigger: CCCCCGCAAGAGGAGCCACCATGGCCTGGGCTTCCT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCTCGTTCAGCAGGGTCTaGAAGCGGGTTCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESSFSRV*KRVRSA
Trigger: AGCAGAGCGAACCCGCTTCCAGACCCTGCTGAACGA...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGCCCCCAGGGGGTGGTaGGGAAGATACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMAPRGW*GRYRAC
Trigger: ACAGGCCCTGTATCTTCCCCACCACCCCCTGGGGGC...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGAAGACAAGGTGAGTaGGCCCCCAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMGRQGE*APRGWW
Trigger: CCACCACCCCCTGGGGGCCCACTCACCTTGTCTTCC...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCGTGGGACGTCACTGCTaGGGTAGGGGTCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRVGRHC*GRGPEG
Trigger: TCCCTCAGGACCCCTACCCCAGCAGTGACGTCCCAC...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTGGATGGCTTCCACTTTaGGCTTTGCCTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPGWLPL*ALPQPA
Trigger: GGCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCC...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGGACAAACTTGTCACTaGGCTCCCGTACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPGQTCH*APVPGA
Trigger: GGCGCCAGGTACGGGAGCCCAGTGACAAGTTTGTCC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAGTGCATCAAGGCCTTaGCGAACTTGTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLSASRP*RTCPWP
Trigger: AGGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATTCTGCTCCTTCAGCATaGCTTCCATGCGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDSAPSA*LPCAPA
Trigger: GGCGGGCGCGCATGGAAGCCATGCTGAAGGAGCAGA...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGGCGTGGGGAGACACCTaGTCCAGCCACACACAGCCC +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQAWGDT*SSHTQP
Trigger: GGGCTGTGTGTGGCTGGACCAGGTGTCTCCCCACGC...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCAGCCTGGGGTTACCTaGCCTGAGGCCATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSQPGVT*PEAIQG
Trigger: GCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTG...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACACACTTGTCTTGCAGTaGGAGCTCTTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHTLVLQ*ELLGLQ
Trigger: CTGCAGCCCCAAGAGCTCCCACTGCAAGACAAGTGT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTAGGTGGCAGGAGCAGTaGGGAGGGCATGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPRWQEQ*GGHEES
Trigger: GCTTTCTTCATGCCCTCCCCACTGCTCCTGCCACCT...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTTGGTTGCCAGCTTGTTaGGGTCCTCCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SGGLSSGLPRLGSSSPSPWLPAC*GPPAPS
Trigger: GGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCA...AGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR TCA 90 bp GTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTGGTTGTCCCGGAGGTTaGTTTCGGGGATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: VSGGLSSGLPRLGSSSPSGCPGG*FRGCHC
Trigger: GCAGTGACATCCCCGAAATCAACCTCCGGGACAACC...AGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR TCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTGGTTGTCCCGGAGGTTaGTTTCGGGGATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSGCPGG*FRGCHC
Trigger: GCAGTGACATCCCCGAAATCAACCTCCGGGACAACC...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGGACACGCTTTTTCCTaGGTGGGACGTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVGHAFS*VGRHCW
Trigger: CCAGCAGTGACGTCCCACTCAGGAAAAAGCGTGTCC...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTGTCAGCGATCTTGTTaGGGCTGGCCACCCGGAACC +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSCQRSC*GWPPGT
Trigger: GGTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACTCTCAGGCCCCTCCTaGGGTTGCCCACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTLSGPS*GCPPPS
Trigger: AGAAGGAGGTGGGCAACCTCAGGAGGGGCCTGAGAG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTATCCTGCCGGGCCTCTaGGAAGGCCTGCAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSILPGL*EGLQEG
Trigger: ACCTTCTTGCAGGCCTTCTCAGAGGCCCGGCAGGAT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACCAGGGCCTGGCTCCCTaGTCGCTTGCGGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDQGLAP*SLAAAL
Trigger: AAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTG...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGCATGAGGTGTGGTaGTGCATGAGGTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHRHEVW*CMRSVL
Trigger: CAAGACAGACCTCATGCATCACCACACCTCATGCCT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCGAGAACTCCATGAACTaGAGAGGGTGGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSENSMN*RGWLSR
Trigger: CCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTC...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCGATGTTGAGCTCCTCTaGGTTCGGGATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSDVELL*VRDGAG
Trigger: TCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATC...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDVRPAG*QLVGVL
Trigger: GAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGAC...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGCGGGTTCGCTCTGCTaGATACACCTGGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPAGSLC*IHLVVQ
Trigger: CTGCACTACCAGGTGTATGCAGCAGAGCGAACCCGC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCATGGCATTTTCATGTTaGCGGAGCTTGTCAATCACA +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLMAFSC*RSLSIT
Trigger: TGTGATTGACAAGCTCCGGCAACATGAAAATGCCAT...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTTCATGCTCCCCGAAGTaGATCAAGGCCTTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVSCSPK*IKALAN
Trigger: GTTCGCCAAGGCCTTGATGCACTTCGGGGAGCATGA...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCGTCTGGCTGCATCTTaGTGTCATGCTCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSRLAAS*CHAPRS
Trigger: ACTTCGGGGAGCATGACAGCAAGATGCAGCCAGACG...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCAGGCTGGACAGAGGCTaGTGTGGCTTCTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESRLDRG*CGFCLE
Trigger: TTCAAGGCAGAAGCCACAGCAGCCTCTGTCCAGCCT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTTCCAAGTGGCCACCTaGAGGCTGGACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSFQVAT*RLDRGC
Trigger: GCAGCCTCTGTCCAGCCTGCAGGTGGCCACTTGGAA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCTCAAACCAACGCACATaGTGGGCTCACCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSSNQRT*WAHRPC
Trigger: ACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTTTGA...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCAGCCAGGCTTGCACTTaGTCAGATCCCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSQACT*SDPSHQ
Trigger: CTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCCCCCAACACTTGTCTTaGAGTGGGAGCTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVPQHLS*SGSSWG
Trigger: GCCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGG...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTCCTGCCCCAGTCCTGGGATaGAGCAGGTCCTGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GGLSSGLPRLGSSSPSPPAPVLG*SRSCFK
Trigger: CTTAAAGCAGGACCTGCTGCATCCCAGGACTGGGGC...AGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCTCACAGGTGGCGTaGTCCATGCTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSLSQVA*SMLRRK
Trigger: TTTCCTCCGGAGCATGGACCACGCCACCTGTGAGAG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCCTCTCACAGGTGGCGTaGTCCATGCTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVLSQVA*SMLRRK
Trigger: TTTCCTCCGGAGCATGGACCACGCCACCTGTGAGAG...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTGCGGCTCTCACAGGTaGCGTGGTCCATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGECGSHR*RGPCSG
Trigger: TCCGGAGCATGGACCACGCCACCTGTGAGAGCCGCA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGTGCGGCTCTCACAGGTaGCGTGGTCCATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQCGSHR*RGPCSG
Trigger: TCCGGAGCATGGACCACGCCACCTGTGAGAGCCGCA...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCCAATGAGTGAGGTGTaGATGCGGCTCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVPMSEV*MRLSQV
Trigger: CACCTGTGAGAGCCGCATCCACACCTCACTCATTGG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGACATGTGCCCGCCCCTaGGAGTTGTTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLTCARP*ELFINA
Trigger: AGCATTGATGAACAACTCCCAGGGGCGGGCACATGT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTCGTTCAGCAGGGTCTaGAAGCGGGTTCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSSFSRV*KRVRSA
Trigger: AGCAGAGCGAACCCGCTTCCAGACCCTGCTGAACGA...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCACACCCCGCTCATCCTaGAGGACAATCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVTPRSS*RTICWR
Trigger: CCTCCAGCAGATTGTCCTCCAGGATGAGCGGGGTGT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACCGGAACTTCTCTGCCTaGTCTCGCCACTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHRNFSA*SRHCFT
Trigger: AGTGAAACAGTGGCGAGACCAGGCAGAGAAGTTCCG...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACCATGCCGAGGCAAGGTaGGGCACCTGGGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDHAEAR*GTWGSR
Trigger: CCGACTCCCCCAGGTGCCCCACCTTGCCTCGGCATG...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGTGGGACGTCACTGCTaGGGTAGGGGTCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTVGRHC*GRGPEG
Trigger: TCCCTCAGGACCCCTACCCCAGCAGTGACGTCCCAC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCGGATGGCTTCCACTTTaGGCTTTGCCTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSGWLPL*ALPQPA
Trigger: GGCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCC...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACGGACAAACTTGTCACTaGGCTCCCGTACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHGQTCH*APVPGA
Trigger: GGCGCCAGGTACGGGAGCCCAGTGACAAGTTTGTCC...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCTGGCCTCATTTAGCTaGTCCTCCAGCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSLASFS*SSSSEK
Trigger: CTTCTCCGAGCTGGAGGACCAGCTAAATGAGGCCAG...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCAGTGCATCAAGGCCTTaGCGAACTTGTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESSASRP*RTCPWP
Trigger: AGGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCCTTCCTCCTCCTCATaGCCTCTAGATCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHPSSSS*PLDPAG
Trigger: CCCGGCAGGATCTAGAGGCCATGAGGAGGAGGAAGG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAATCTGCTCCTTCAGCATaGCTTCCATGCGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKSAPSA*LPCAPA
Trigger: GGCGGGCGCGCATGGAAGCCATGCTGAAGGAGCAGA...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTATCTGCTCCTTCAGCATaGCTTCCATGCGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVSAPSA*LPCAPA
Trigger: GGCGGGCGCGCATGGAAGCCATGCTGAAGGAGCAGA...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGTCTGCTCCTTCAGCATaGCTTCCATGCGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQSAPSA*LPCAPA
Trigger: GGCGGGCGCGCATGGAAGCCATGCTGAAGGAGCAGA...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGTAACTTCCAGGGCCTaGCTCCCTGATCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSVTSRA*LPDRLR
Trigger: CCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGTTAC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTTCCCGGCCTCCTGTGTaGCTAGTTCCCCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSSRPPV*LVPQVN
Trigger: ATTGACCTGGGGAACTAGCCACACAGGAGGCCGGGA...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAGCGTGGGGAGACACCTaGTCCAGCCACACACAGCCC +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRAWGDT*SSHTQP
Trigger: GGGCTGTGTGTGGCTGGACCAGGTGTCTCCCCACGC...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACCTGGCTTCACAACAATaGCCAGGTGTCCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHLASQQ*PGVQEM
Trigger: CATCTCCTGGACACCTGGCCATTGTTGTGAAGCCAG...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCACACATGGTTCCAAGTaGCCACCTGCAGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFTHGSK*PPAGWT
Trigger: TGTCCAGCCTGCAGGTGGCCACTTGGAACCATGTGT...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCACACATGGTTCCAAGTaGCCACCTGCAGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESTHGSK*PPAGWT
Trigger: TGTCCAGCCTGCAGGTGGCCACTTGGAACCATGTGT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCACGCCAGTGGACACATaGTTCCAAGTGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSTPVDT*FQVATC
Trigger: GCAGGTGGCCACTTGGAACCATGTGTCCACTGGCGT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTACCTGGGTTCCAGGATaGCCTCTTCACACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVTWVPG*PLHTCV
Trigger: GACACAGGTGTGAAGAGGCCATCCTGGAACCCAGGT...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCACACTTGTCTTGCAGTaGGAGCTCTTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFTLVLQ*ELLGLQ
Trigger: CTGCAGCCCCAAGAGCTCCCACTGCAAGACAAGTGT...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGTATCCAGTCTTCCATaGTGGGTGGGAATGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLVSSLP*WVGMPD
Trigger: GTCTGGCATTCCCACCCACCATGGAAGACTGGATAC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACGAGATCTGGCTACAGTaGCATCTAGCACCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHEIWLQ*HLAPEP
Trigger: TGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTC...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCGGTCCAAGGCACTGTTaGAGATCTGGCTACAGTGGC +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSGPRHC*RSGYSG
Trigger: GCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACC...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACTCAGCCACCCCGACTaGGCACCAGCCCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTLSHPD*APAPSY
Trigger: GTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTACTCAGCCACCCCGACTaGGCACCAGCCCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVLSHPD*APAPSY
Trigger: GTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTGGAGTAGGGAGAGGCTaGAACAGACCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVGVGRG*NRPFPI
Trigger: AATGGGGAAGGGTCTGTTCCAGCCTCTCCCTACTCC...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp GCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTaGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ATPTGHQPLLTQ*SMSPWSKALLE
Trigger: CTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATGGTTGTCCCGGAGGTTaGTTTCGGGGATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDGCPGG*FRGCHC
Trigger: GCAGTGACATCCCCGAAATCAACCTCCGGGACAACC...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCGGCTGGAGAACTCCATaGACTGCAGAGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSGWRTP*TAEGGC
Trigger: ACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCC...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTGGCTGGAGAACTCCATaGACTGCAGAGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSGWRTP*TAEGGC
Trigger: ACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCC...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGGCTGGAGAACTCCATaGACTGCAGAGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPGWRTP*TAEGGC
Trigger: ACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCTGCAAAGCGGATGTTaGGCTCCTCTGCGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVLQSGC*APLRSG
Trigger: TCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAG...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTCTGCAAAGCGGATGTTaGGCTCCTCTGCGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSLQSGC*APLRSG
Trigger: TCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAG...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACGCTTCTCCAGGATCATaGTCAGGTAATGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHASPGS*SGNGAE
Trigger: CTCTGCTCCATTACCTGATCATGATCCTGGAGAAGC...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGATCCTGCCGGGCCTCTaGGAAGGCCTGCAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMILPGL*EGLQEG
Trigger: ACCTTCTTGCAGGCCTTCTCAGAGGCCCGGCAGGAT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTGCTTGCGGCTGCGCTTaGGCTTGCATAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSACGCA*ACISPC
Trigger: ACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGC...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTGGGGTTACCTGGCCTaGGGCCATCCAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELWGYLA*GHPRQP
Trigger: AGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCAGGCCAGAGGACTTGTaGCATGGGAAACAGACACTG +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFRPEDL*HGKQTL
Trigger: CAGTGTCTGTTTCCCATGTCACAAGTCCTCTGGCCT...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTAGGCCAGAGGACTTGTaGCATGGGAAACAGACACTG +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVRPEDL*HGKQTL
Trigger: CAGTGTCTGTTTCCCATGTCACAAGTCCTCTGGCCT...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTAGGCATGAGGTGTGGTaGTGCATGAGGTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVRHEVW*CMRSVL
Trigger: CAAGACAGACCTCATGCATCACCACACCTCATGCCT...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTGATGCCCAAAAGGCATaGGGTGTGGTGATGCATGAG +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPDAQKA*GVVMHE
Trigger: CTCATGCATCACCACACCTCATGCCTTTTGGGCATC...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACCATCTGAACGCCTaGGAGGAGGGGCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQHHLNA*EEGPPL
Trigger: TAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTG...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCCTTGGCACCTTCAGGTaGTGTGCTCCCCAGAGGATA +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSLGTFR*CAPQRI
Trigger: TATCCTCTGGGGAGCACATCACCTGAAGGTGCCAAG...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCCACCAAGGCCAGCATaGGATGGACAAAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVPPRPA*DGQNGR
Trigger: CCTTCCATTTTGTCCATCTCATGCTGGCCTTGGTGG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCTGAGGGGGTTAGGTTaGCATCAGCCTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSLRGLG*HQPGQF
Trigger: AAACTGACCAGGCTGATGTCAACCTAACCCCCTCAG...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTCCTGAGAACTCCATGAACTaGAGAGGGTGGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GGLSSGLPRLGSSSPSPPENSMN*RGWLSR
Trigger: CCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTC...AGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp CTCATCTCCGTCTCCTCCTCATCAAACGCGTACAGACTCTGCATCGCAGCCATGGATGTTGAGCTCCTCTaGGTTCGGGATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LISVSSSSNAYRLCIAAMDVELL*VRDGAG
Trigger: TCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATC...CATGGCTGCGATGCAGAGTCTGTACGCGTTTGATGAGGAGGAGACGGAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCCTTCTCAGGGGGCAGTaGAAACATAGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFLLRGQ*KHSLSV
Trigger: AACCGAGAGGCTATGTTTGCACTGCCCCCTGAGAAG...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGCTTCTCAGGGGGCAGTaGAAACATAGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: AVSGGLSSGLPRLGSSSPLLRGQ*KHSLSV
Trigger: AACCGAGAGGCTATGTTTGCACTGCCCCCTGAGAAG...CGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCTTCTCAGGGGGCAGTaGAAACATAGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVLLRGQ*KHSLSV
Trigger: AACCGAGAGGCTATGTTTGCACTGCCCCCTGAGAAG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTGTGCCAGCACATGTaGCCGCCCCTGGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTLCQHM*PPLGVV
Trigger: AACAACTCCCAGGGGCGGGCACATGTGCTGGCACAG...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGAAGCGGGTTCGCTCTaGTGCATACACCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVEAGSL*CIHLVV
Trigger: CACTACCAGGTGTATGCAGCAGAGCGAACCCGCTTC...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTTTCCGGAACTTCTCTaGCTGGTCTCGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLFPELL*LVSPLF
Trigger: AAACAGTGGCGAGACCAGGCAGAGAAGTTCCGGAAA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACATCCGCTCAATTTCATaGTTGTGCTCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHIRSIS*LCSSRR
Trigger: CCTCCTGGAGGAGCACAAGCATGAAATTGAGCGGAT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTTCCACTTTGGGCTTTaGCTCAGCCAGCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSFHFGL*LSQPLL
Trigger: CAGGAGCGGCTGGCTGAGGCAAAGCCCAAAGTGGAA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTCATGCTCCCCGAAGTaGATCAAGGCCTTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSSCSPK*IKALAN
Trigger: GTTCGCCAAGGCCTTGATGCACTTCGGGGAGCATGA...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGCATCTTGCTGTCATaGTCCCCGAAGTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLCILLS*SPKCIK
Trigger: CTTGATGCACTTCGGGGAGCATGACAGCAAGATGCA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCAGAAGGTATCAAAGATaGCAAAGAATTCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLRRYQR*QRIRLA
Trigger: AGCCAGACGAATTCTTTGGCATCTTTGATACCTTCT...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTCGCTCACGTTCCCTCTaGTCCTTCAGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSRSRSL*SFSMAS
Trigger: GGAAGCCATGCTGAAGGAGCAGAGGGAACGTGAGCG...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCATCATTGCTCCCCGTaGTACACAGGAACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVHHCSP*YTGTLD
Trigger: GTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATGGCTCCCTCCATCATTaGTCCCCGTGCTACACAGGA +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDGSLHH*SPCYTG
Trigger: TCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCC...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCTGTGTCAGCCAGGCTTaGACTTGCTCAGATCCCTCC +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSCVSQA*TCSDPS
Trigger: GGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACA...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTGTGTCAGCCAGGCTTaGACTTGCTCAGATCCCTCC +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSCVSQA*TCSDPS
Trigger: GGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACA...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTCTCTGCAGCTGTTCTaGCTGGAAGCCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLSLQLF*LEAFIL
Trigger: CAAGATGAAGGCTTCCAGGCAGAACAGCTGCAGAGA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCCCCCAACACTTGTCTTaGAGTGGGAGCTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRPQHLS*SGSSWG
Trigger: GCCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGG...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCATGGTGGGTGGGAATaGCAGACACGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSHGGWE*QTRLWS
Trigger: GCTCCACAAGCGTGTCTGGCATTCCCACCCACCATG...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCATGAACTGCAGAGGGTaGTTGTCCCGGAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSMNCRG*LSRRLI
Trigger: AATCAACCTCCGGGACAACCACCCTCTGCAGTTCAT...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTGGTTGCCAGCTTGTTaGGGTCCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVWLPAC*GPPAPS
Trigger: AGAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCA...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTGGTTGCCAGCTTGTTaGGGTCCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPWLPAC*GPPAPS
Trigger: AGAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCTCTCACAGGTGGCGTaGTCCATGCTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSLSQVA*SMLRRK
Trigger: TTTCCTCCGGAGCATGGACCACGCCACCTGTGAGAG...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATGCGGCTCTCACAGGTaGCGTGGTCCATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVCGSHR*RGPCSG
Trigger: TCCGGAGCATGGACCACGCCACCTGTGAGAGCCGCA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCCAATGAGTGAGGTGTaGATGCGGCTCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSPMSEV*MRLSQV
Trigger: CACCTGTGAGAGCCGCATCCACACCTCACTCATTGG...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCACATGTGCCCGCCCCTaGGAGTTGTTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSTCARP*ELFINA
Trigger: AGCATTGATGAACAACTCCCAGGGGCGGGCACATGT...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTCGTTCAGCAGGGTCTaGAAGCGGGTTCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVSFSRV*KRVRSA
Trigger: AGCAGAGCGAACCCGCTTCCAGACCCTGCTGAACGA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTCGTTCAGCAGGGTCTaGAAGCGGGTTCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSSFSRV*KRVRSA
Trigger: AGCAGAGCGAACCCGCTTCCAGACCCTGCTGAACGA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCACACCCCGCTCATCCTaGAGGACAATCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRTPRSS*RTICWR
Trigger: CCTCCAGCAGATTGTCCTCCAGGATGAGCGGGGTGT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACACTTGTCCCCGAGCCTaGCGCAGCTCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDTCPRA*RSSWDS
Trigger: GGAGTCCCAGGAGCTGCGCCAGGCTCGGGGACAAGT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTCAGAGGAGGAGGGGGTaGAGGCAGGTCATTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSQRRRG*RQVIGC
Trigger: ACAACCAATGACCTGCCTCCACCCCCTCCTCCTCTG...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCATCCATCTTCAAGATaGCCTGCCGGATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSHPSSR*PAGSPR
Trigger: ACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATG...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGATGGCTTCCACTTTaGGCTTTGCCTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSGWLPL*ALPQPA
Trigger: GGCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCC...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCTGGCCTCATTTAGCTaGTCCTCCAGCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSLASFS*SSSSEK
Trigger: CTTCTCCGAGCTGGAGGACCAGCTAAATGAGGCCAG...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGCCTTCCTCCTCCTCATaGCCTCTAGATCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEPSSSS*PLDPAG
Trigger: CCCGGCAGGATCTAGAGGCCATGAGGAGGAGGAAGG...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTCCCGGCCTCCTGTGTaGCTAGTTCCCCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSRPPV*LVPQVN
Trigger: ATTGACCTGGGGAACTAGCCACACAGGAGGCCGGGA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACAGCCTGGGGTTACCTaGCCTGAGGCCATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPQPGVT*PEAIQG
Trigger: GCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCAGCCTGGGGTTACCTaGCCTGAGGCCATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVQPGVT*PEAIQG
Trigger: GCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTTCTGTGCCAGCACATaGGTGCCCATGGTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVFCAST*VPMVGD
Trigger: ATCCCCTACCATGGGCACCCATGTGCTGGCACAGAA...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCGTGTTAGAGAAGGGGTaGGAGGGCCTGAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSVLEKG*EGLSNL
Trigger: TAAATTGCTCAGGCCCTCCCACCCCTTCTCTAACAC...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGTGTTAGAGAAGGGGTaGGAGGGCCTGAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLVLEKG*EGLSNL
Trigger: TAAATTGCTCAGGCCCTCCCACCCCTTCTCTAACAC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCACGCCAGTGGACACATaGTTCCAAGTGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRTPVDT*FQVATC
Trigger: GCAGGTGGCCACTTGGAACCATGTGTCCACTGGCGT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTAACCAACGCACATGCTaGGCTCACCGACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSNQRTC*AHRPCV
Trigger: AACACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTT...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCAGGTGGCAGGAGCAGTaGGGAGGGCATGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRRWQEQ*GGHEES
Trigger: GCTTTCTTCATGCCCTCCCCACTGCTCCTGCCACCT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACAGGTGGCAGGAGCAGTaGGGAGGGCATGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHRWQEQ*GGHEES
Trigger: GCTTTCTTCATGCCCTCCCCACTGCTCCTGCCACCT...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCCCCAGTTGGTGGAAATaGGATGGGAGTAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPPSWWK*DGSRER
Trigger: CCTCTCCCTACTCCCATCCCATTTCCACCAACTGGG...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACTCACAGTTCCCCAGTTaGTGGAAATGGGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHSQFPS*WKWDGS
Trigger: ACTCCCATCCCATTTCCACCAACTGGGGAACTGTGA...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp ATGGCCTCTTCACACCTGTGTCAGCCAGGCTTGCACTaGCTCAGATCCCTCCCACCAGAACACACACACACC +
Preference number: 4 (lower is better)
Translates to: MASSHLCQPGLH*LRSLPPEHTHT
Trigger: GGTGTGTGTGTGTTCTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACAGGTGTGAAGAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp TCCAGGATGGCCTCTTCACACCTGTGTCAGCCAGGCTaGCACTTGCTCAGATCCCTCCCACCAGAACACACA +
Preference number: 4 (lower is better)
Translates to: SRMASSHLCQPG*HLLRSLPPEHT
Trigger: TGTGTGTTCTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACAGGTGTGAAGAGGCCATCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGGTTGTCCCGGAGGTTaGTTTCGGGGATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTGCPGG*FRGCHC
Trigger: GCAGTGACATCCCCGAAATCAACCTCCGGGACAACC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCTGCAAAGCGGATGTTaGGCTCCTCTGCGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQLQSGC*APLRSG
Trigger: TCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAG...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTAGCCCTCCAGCTCAATaGAGCGGGTCACAAACCTCA +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSPPAQ*SGSQTS
Trigger: TGAGGTTTGTGACCCGCTTCATTGAGCTGGAGGGCT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGATGCAGCCAATGAGTaGGGTGTGGATGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMDAANE*GVDAAL
Trigger: GAGAGCCGCATCCACACCTCACTCATTGGCTGCATC...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGATGCAGCCAATGAGTaGGGTGTGGATGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTDAANE*GVDAAL
Trigger: GAGAGCCGCATCCACACCTCACTCATTGGCTGCATC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGGATGCAGCCAATGAGTaGGGTGTGGATGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEDAANE*GVDAAL
Trigger: GAGAGCCGCATCCACACCTCACTCATTGGCTGCATC...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGTTGAGAGTTCACTaGGCTGGGCTACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDLLRVH*AGLPAL
Trigger: CAGAGCTGGTAGCCCAGCTCAGTGAACTCTCAACAG...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGGGACACGCTTTTTCCTaGGTGGGACGTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQGHAFS*VGRHCW
Trigger: CCAGCAGTGACGTCCCACTCAGGAAAAAGCGTGTCC...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAAAGGACTTCAGTGGGTaGGAAGGCTGGGGGACACGC +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPKDFSG*EGWGTR
Trigger: GCGTGTCCCCCAGCCTTCTCACCCACTGAAGTCCTT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGATGTCAGCGATCTTGTTaGGGCTGGCCACCCGGAACC +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRCQRSC*GWPPGT
Trigger: GGTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACA...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTGTCAGCGATCTTGTTaGGGCTGGCCACCCGGAACC +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELCQRSC*GWPPGT
Trigger: GGTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGCTTGCGGCTGCGCTTaGGCTTGCATAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSACGCA*ACISPC
Trigger: ACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGC...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCGATGCCCAAAAGGCATaGGGTGTGGTGATGCATGAG +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSDAQKA*GVVMHE
Trigger: CTCATGCATCACCACACCTCATGCCTTTTGGGCATC...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCCTCCAAGGCAACATTTaGGGTCACTGTCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESLQGNI*GHCLAS
Trigger: TGAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAG...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCCCACCAAGGCCAGCATaGGATGGACAAAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSPPRPA*DGQNGR
Trigger: CCTTCCATTTTGTCCATCTCATGCTGGCCTTGGTGG...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGCTCGGAACGTGGTATTaGATAAGAGCCTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLLGTWY*IRALME
Trigger: CTCCATCAAGGCTCTTATTCAATACCACGTTCCGAG...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGCAGTCTCAAAGAAGATaGAAGGCCAACTCGGAACGT +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLQSQRR*KANSER
Trigger: ACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTG...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTGAGAACTCCATGAACTaGAGAGGGTGGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLENSMN*RGWLSR
Trigger: CCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTC...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGATGTTGAGCTCCTCTaGGTTCGGGATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKDVELL*VRDGAG
Trigger: TCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATC...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGATGTTGAGCTCCTCTaGGTTCGGGATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMDVELL*VRDGAG
Trigger: TCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATC...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCTTCATCCACCAGCTCTaGAAAGCGGATGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESFIHQL*KADVEL
Trigger: GAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAA...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTTGTTGGGGTCCTCCTaGTCCTTCTTCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVLLGSS*SFFLLQ
Trigger: CTGCAGCAAGAAGAAGGAGCAGGAGGACCCCAACAA...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELVRPAG*QLVGVL
Trigger: GAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGAC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPVRPAG*QLVGVL
Trigger: GAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGAC...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGGTGGCGTGGTCCATaGTCCGGAGGAAATTTAGCA +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSRWRGP*SGGNLA
Trigger: TGCTAAATTTCCTCCGGAGCATGGACCACGCCACCT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACTGTGCCAGCACATGTaGCCGCCCCTGGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRLCQHM*PPLGVV
Trigger: AACAACTCCCAGGGGCGGGCACATGTGCTGGCACAG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTaGCCGCCCCTGGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVLCQHM*PPLGVV
Trigger: AACAACTCCCAGGGGCGGGCACATGTGCTGGCACAG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTTCTTGCTGTTCTCTGTaGGTAGGCTCTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSSCCSL*VGSGLW
Trigger: CCATAGCCCAGAGCCTACGCACAGAGAACAGCAAGA...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGGCGGGTTCGCTCTGCTaGATACACCTGGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQAGSLC*IHLVVQ
Trigger: CTGCACTACCAGGTGTATGCAGCAGAGCGAACCCGC...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTATCCTGGAGGACAATCTaGTGGAGGATGCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVSWRTI*WRMRSR
Trigger: CCTGGACCGCATCCTCCAGCAGATTGTCCTCCAGGA...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCCTGGAGGACAATCTaGTGGAGGATGCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSWRTI*WRMRSR
Trigger: CCTGGACCGCATCCTCCAGCAGATTGTCCTCCAGGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTCTCATTCCATACGGTaGCAGGGACACGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSSHSIR*QGHAPH
Trigger: ATGAGGAGCGTGTCCCTGGCACCGTATGGAATGAGA...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTTCTCATTCCATACGGTaGCAGGGACACGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSSHSIR*QGHAPH
Trigger: ATGAGGAGCGTGTCCCTGGCACCGTATGGAATGAGA...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACATCTTCAAGATGGCCTaGCGGATCTCCTCGTTAGAA +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHIFKMA*RISSLE
Trigger: TTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGAT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTTCCACTTTGGGCTTTaGCTCAGCCAGCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEFHFGL*LSQPLL
Trigger: CAGGAGCGGCTGGCTGAGGCAAAGCCCAAAGTGGAA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGATGTTTCTGTCGATaGTGGACTTGGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHRCFCR*WTWCQR
Trigger: TCGCTGACACCAAGTCCAGCATCGACAGAAACATCT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAGATGTTTCTGTCGATaGTGGACTTGGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLRCFCR*WTWCQR
Trigger: TCGCTGACACCAAGTCCAGCATCGACAGAAACATCT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTCATGCTCCCCGAAGTaGATCAAGGCCTTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSCSPK*IKALAN
Trigger: GTTCGCCAAGGCCTTGATGCACTTCGGGGAGCATGA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAAGAATTCGTCTGGCTaGATCTTGCTGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLKNSSG*ILLSCS
Trigger: GGAGCATGACAGCAAGATGCAGCCAGACGAATTCTT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAATGGCCTCTAGATCCTaGCGGGCCTCTGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPMASRS*RASEKA
Trigger: GGCCTTCTCAGAGGCCCGGCAGGATCTAGAGGCCAT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAATCAGCATGGCTTCCATaGGCGCCCGCCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMESAWLP*APAAPP
Trigger: AGGAGGAGCGGCGGGCGCGCATGGAAGCCATGCTGA...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCCATCATTGCTCCCCGTaGTACACAGGAACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSHHCSP*YTGTLD
Trigger: GTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCCATCATTGCTCCCCGTaGTACACAGGAACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSHHCSP*YTGTLD
Trigger: GTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAAGATACTTAAGACATaGAGGGAGAGGCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLKILKT*RERPED
Trigger: GTCCTCTGGCCTCTCCCTGCATGTCTTAAGTATCTT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAGCCAGGCTTGCACTTaGTCAGATCCCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVSQACT*SDPSHQ
Trigger: CTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCTCTCTGCAGCTGTTCTaGCTGGAAGCCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSSLQLF*LEAFIL
Trigger: CAAGATGAAGGCTTCCAGGCAGAACAGCTGCAGAGA...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACATGGTGGGTGGGAATaGCAGACACGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTHGGWE*QTRLWS
Trigger: GCTCCACAAGCGTGTCTGGCATTCCCACCCACCATG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTTGGTTGCCAGCTTGTTaGGGTCCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLWLPAC*GPPAPS
Trigger: AGAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCA...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAATAGTCAGGCCAGCTaGTTGCCAGCTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSNSQAS*LPACWG
Trigger: ACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCTCTCACAGGTGGCGTaGTCCATGCTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMLSQVA*SMLRRK
Trigger: TTTCCTCCGGAGCATGGACCACGCCACCTGTGAGAG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTTCTGTGCGTAGGCTCTaGGCTATGGTACTAATGGCC +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSSVRRL*AMVLMA
Trigger: GGCCATTAGTACCATAGCCCAGAGCCTACGCACAGA...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCCCATGTCAAACCTCCTaGCTAGCTCCAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVPCQTS*LAPGHP
Trigger: AGGATGACCTGGAGCTAGCCAGGAGGTTTGACATGG...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAACAGAGGAGGAGGGGGTaGAGGCAGGTCATTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKQRRRG*RQVIGC
Trigger: ACAACCAATGACCTGCCTCCACCCCCTCCTCCTCTG...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTACAGAGGAGGAGGGGGTaGAGGCAGGTCATTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVQRRRG*RQVIGC
Trigger: ACAACCAATGACCTGCCTCCACCCCCTCCTCCTCTG...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGTGGGACGTCACTGCTaGGGTAGGGGTCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDVGRHC*GRGPEG
Trigger: TCCCTCAGGACCCCTACCCCAGCAGTGACGTCCCAC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGTTGAAGGACTTCAGTaGGTGAGAAGGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSVEGLQ*VRRLGD
Trigger: GTCCCCCAGCCTTCTCACCCACTGAAGTCCTTCAAC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATGTTGAAGGACTTCAGTaGGTGAGAAGGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDVEGLQ*VRRLGD
Trigger: GTCCCCCAGCCTTCTCACCCACTGAAGTCCTTCAAC...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCGGTAGATGTCTTCAGTaGAGCCCAGCTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFGRCLQ*SPALSG
Trigger: ACCAGAAAGAGCTGGGCTCCACTGAAGACATCTACC...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCATCCATCTTCAAGATaGCCTGCCGGATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSHPSSR*PAGSPR
Trigger: ACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATG...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCATCCATCTTCAAGATaGCCTGCCGGATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSHPSSR*PAGSPR
Trigger: ACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGGATGGCTTCCACTTTaGGCTTTGCCTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTGWLPL*ALPQPA
Trigger: GGCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGGACAAACTTGTCACTaGGCTCCCGTACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELGQTCH*APVPGA
Trigger: GGCGCCAGGTACGGGAGCCCAGTGACAAGTTTGTCC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGAGTGCATCAAGGCCTTaGCGAACTTGTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVSASRP*RTCPWP
Trigger: AGGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACT...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAGTAACTTCCAGGGCCTaGCTCCCTGATCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVVTSRA*LPDRLR
Trigger: CCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGTTAC...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTCCCGGCCTCCTGTGTaGCTAGTTCCCCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGESRPPV*LVPQVN
Trigger: ATTGACCTGGGGAACTAGCCACACAGGAGGCCGGGA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATTTCTGTGCCAGCACATaGGTGCCCATGGTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDFCAST*VPMVGD
Trigger: ATCCCCTACCATGGGCACCCATGTGCTGGCACAGAA...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTTCTGTGCCAGCACATaGGTGCCCATGGTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSFCAST*VPMVGD
Trigger: ATCCCCTACCATGGGCACCCATGTGCTGGCACAGAA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCAGGAGATGGGGACATaGGAGATGCCCAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSQEMGT*EMPKRH
Trigger: ATGCCTTTTGGGCATCTCCCATGTCCCCATCTCCTG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCCTGGCTTCACAACAATaGCCAGGTGTCCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVLASQQ*PGVQEM
Trigger: CATCTCCTGGACACCTGGCCATTGTTGTGAAGCCAG...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTATGTAGAGGGCAGCTCTaGCCCTCAGACCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVCRGQL*PSDLSG
Trigger: TCCTGAGAGGTCTGAGGGCCAGAGCTGCCCTCTACA...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTAGAGGGCAGCTCTaGCCCTCAGACCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTCRGQL*PSDLSG
Trigger: TCCTGAGAGGTCTGAGGGCCAGAGCTGCCCTCTACA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTCAGCCTTCCTCCTTaGCACCTTCAGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHLSLPP*HLQVMC
Trigger: GCACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACACCTGGGTTCCAGGATaGCCTCTTCACACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHTWVPG*PLHTCV
Trigger: GACACAGGTGTGAAGAGGCCATCCTGGAACCCAGGT...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCATCTTGCCCTCACCTaGGTTCCAGGATGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSHLALT*VPGWPL
Trigger: AAGAGGCCATCCTGGAACCCAGGTGAGGGCAAGATG...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTCATCTTGCCCTCACCTaGGTTCCAGGATGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSHLALT*VPGWPL
Trigger: AAGAGGCCATCCTGGAACCCAGGTGAGGGCAAGATG...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACGTCTTCCATGGTGGGTaGGAATGCCAGACACGCTTG +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHVFHGG*ECQTRL
Trigger: CAAGCGTGTCTGGCATTCCCACCCACCATGGAAGAC...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTGAGATCTGGCTACAGTaGCATCTAGCACCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSEIWLQ*HLAPEP
Trigger: TGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTC...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACTTGAGTATGAGTCCATaGTCCAAGGCACTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHLSMSP*SKALLE
Trigger: CTCCAACAGTGCCTTGGACCATGGACTCATACTCAA...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCCCAGTTGGTGGAAATaGGATGGGAGTAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDPSWWK*DGSRER
Trigger: CCTCTCCCTACTCCCATCCCATTTCCACCAACTGGG...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCAGTTCCCCAGTTGGTaGAAATGGGATGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSQFPSW*KWDGSR
Trigger: CCTACTCCCATCCCATTTCCACCAACTGGGGAACTG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGCTGCAAAGCGGATGTTaGGCTCCTCTGCGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELLQSGC*APLRSG
Trigger: TCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAG...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCTCGCAGCCATGGAATTaGTGCGGTCGATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSSQPWN*CGRCNS
Trigger: ACTATTACATCGACCGCATCAATTCCATGGCTGCGA...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAGCCCTCCAGCTCAATaGAGCGGGTCACAAACCTCA +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVSPPAQ*SGSQTS
Trigger: TGAGGTTTGTGACCCGCTTCATTGAGCTGGAGGGCT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGAGCCCTCCAGCTCAATaGAGCGGGTCACAAACCTCA +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQSPPAQ*SGSQTS
Trigger: TGAGGTTTGTGACCCGCTTCATTGAGCTGGAGGGCT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTACTGTTGAGAGTTCACTaGGCTGGGCTACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVLLRVH*AGLPAL
Trigger: CAGAGCTGGTAGCCCAGCTCAGTGAACTCTCAACAG...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCTGTTGAGAGTTCACTaGGCTGGGCTACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMLLRVH*AGLPAL
Trigger: CAGAGCTGGTAGCCCAGCTCAGTGAACTCTCAACAG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTGGACACGCTTTTTCCTaGGTGGGACGTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVGHAFS*VGRHCW
Trigger: CCAGCAGTGACGTCCCACTCAGGAAAAAGCGTGTCC...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACAAGGACTTCAGTGGGTaGGAAGGCTGGGGGACACGC +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDKDFSG*EGWGTR
Trigger: GCGTGTCCCCCAGCCTTCTCACCCACTGAAGTCCTT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTACTTGGAAAGAAGGATaGTGCAGTTTTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSTWKEG*CSFGPS
Trigger: GGAGGGCCCAAAACTGCATCATCCTTCTTTCCAAGT...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTGCTTCTCCAGGATCATaGTCAGGTAATGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSASPGS*SGNGAE
Trigger: CTCTGCTCCATTACCTGATCATGATCCTGGAGAAGC...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTGCTTCTCCAGGATCATaGTCAGGTAATGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSASPGS*SGNGAE
Trigger: CTCTGCTCCATTACCTGATCATGATCCTGGAGAAGC...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATATCCTGCCGGGCCTCTaGGAAGGCCTGCAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDILPGL*EGLQEG
Trigger: ACCTTCTTGCAGGCCTTCTCAGAGGCCCGGCAGGAT...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGGCTTGCGGCTGCGCTTaGGCTTGCATAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQACGCA*ACISPC
Trigger: ACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGC...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTACTGCTACTCTGTCCTaGTGGCTTTGGTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSTATLS*WLWSLH
Trigger: ATGCAGGGACCAAAGCCATCAGGACAGAGTAGCAGT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCACCATCTGAACGCCTaGGAGGAGGGGCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDHHLNA*EEGPPL
Trigger: TAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTG...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAAGCTGTTCGCACCATCTaGACGCCTGAGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEAVRTI*TPERRG
Trigger: GCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGC...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAACTTGGCACCTTCAGGTaGTGTGCTCCCCAGAGGATA +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKLGTFR*CAPQRI
Trigger: TATCCTCTGGGGAGCACATCACCTGAAGGTGCCAAG...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCCTTGCAAGTTGGGCTaGAGAACCAAATTGGGTACC +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSPCKLG*RTKLGT
Trigger: GGTACCCAATTTGGTTCTTCAGCCCAACTTGCAAGG...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGAGGGGGTTAGGTTaGCATCAGCCTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHLRGLG*HQPGQF
Trigger: AAACTGACCAGGCTGATGTCAACCTAACCCCCTCAG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGGTAAAGTCAGGGCATaGGGTTGGTTTGCGACCGCA +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKGKVRA*GWFATA
Trigger: TGCGGTCGCAAACCAACCTCATGCCCTGACTTTACC...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTTCATCCACCAGCTCTaGAAAGCGGATGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSFIHQL*KADVEL
Trigger: GAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAA...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTAGGTGGCGTGGTCCATaGTCCGGAGGAAATTTAGCA +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSRWRGP*SGGNLA
Trigger: TGCTAAATTTCCTCCGGAGCATGGACCACGCCACCT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACCTGTGCCAGCACATGTaGCCGCCCCTGGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDLCQHM*PPLGVV
Trigger: AACAACTCCCAGGGGCGGGCACATGTGCTGGCACAG...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTCTTGCTGTTCTCTGTaGGTAGGCTCTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHSCCSL*VGSGLW
Trigger: CCATAGCCCAGAGCCTACGCACAGAGAACAGCAAGA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATCCTGGAGGACAATCTaGTGGAGGATGCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVSWRTI*WRMRSR
Trigger: CCTGGACCGCATCCTCCAGCAGATTGTCCTCCAGGA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTCTCATTCCATACGGTaGCAGGGACACGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSHSIR*QGHAPH
Trigger: ATGAGGAGCGTGTCCCTGGCACCGTATGGAATGAGA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCATCCGCTCAATTTCATaGTTGTGCTCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSIRSIS*LCSSRR
Trigger: CCTCCTGGAGGAGCACAAGCATGAAATTGAGCGGAT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACGTCTGGCTGCATCTTaGTGTCATGCTCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTRLAAS*CHAPRS
Trigger: ACTTCGGGGAGCATGACAGCAAGATGCAGCCAGACG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCGTCTGGCTGCATCTTaGTGTCATGCTCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQRLAAS*CHAPRS
Trigger: ACTTCGGGGAGCATGACAGCAAGATGCAGCCAGACG...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACATGGCCTCTAGATCCTaGCGGGCCTCTGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDMASRS*RASEKA
Trigger: GGCCTTCTCAGAGGCCCGGCAGGATCTAGAGGCCAT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTCTGGAACTGTTCTGTaGCAGCACATGGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVSGTVL*QHMGAH
Trigger: ATGGGCACCCATGTGCTGGCACAGAACAGTTCCAGA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTCTGGAACTGTTCTGTaGCAGCACATGGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRSGTVL*QHMGAH
Trigger: ATGGGCACCCATGTGCTGGCACAGAACAGTTCCAGA...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATTCTGGAACTGTTCTGTaGCAGCACATGGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDSGTVL*QHMGAH
Trigger: ATGGGCACCCATGTGCTGGCACAGAACAGTTCCAGA...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTGGCTCCCTCCATCATTaGTCCCCGTGCTACACAGGA +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVGSLHH*SPCYTG
Trigger: TCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCC...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCGGCTGCTGTGGCTTCTaGCTTGAAGCTAGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSGCCGF*LEASVR
Trigger: TCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTCCCTTGCCTGCTCTaGTGTTCGCACCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRFPCLL*CSHHLN
Trigger: GTTCAGATGGTGCGAACAGCAGAGCAGGCAAGGGAA...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATTTCCCTTGCCTGCTCTaGTGTTCGCACCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDFPCLL*CSHHLN
Trigger: GTTCAGATGGTGCGAACAGCAGAGCAGGCAAGGGAA...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTCAAACCAACGCACATaGTGGGCTCACCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGESNQRT*WAHRPC
Trigger: ACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTTTGA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAAGCCAGGCTTGCACTTaGTCAGATCCCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPSQACT*SDPSHQ
Trigger: CTGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACCCCAACACTTGTCTTaGAGTGGGAGCTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVPQHLS*SGSSWG
Trigger: GCCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACATGGTGGGTGGGAATaGCAGACACGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVHGGWE*QTRLWS
Trigger: GCTCCACAAGCGTGTCTGGCATTCCCACCCACCATG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTCCTTTTGTTTCCAGGTaGGTATCCAGTCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPPFVSR*VSSLPW
Trigger: CCATGGAAGACTGGATACGCACCTGGAAACAAAAGG...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCCCTTTTGTTTCCAGGTaGGTATCCAGTCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESPFVSR*VSSLPW
Trigger: CCATGGAAGACTGGATACGCACCTGGAAACAAAAGG...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCATGAACTGCAGAGGGTaGTTGTCCCGGAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVMNCRG*LSRRLI
Trigger: AATCAACCTCCGGGACAACCACCCTCTGCAGTTCAT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTATGAACTGCAGAGGGTaGTTGTCCCGGAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: VSGGLSSGLPRLGSSSPSMNCRG*LSRRLI
Trigger: AATCAACCTCCGGGACAACCACCCTCTGCAGTTCAT...AGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCAATAGTCAGGCCAGCTaGTTGCCAGCTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRNSQAS*LPACWG
Trigger: ACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACCAATGAGTGAGGTGTaGATGCGGCTCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTPMSEV*MRLSQV
Trigger: CACCTGTGAGAGCCGCATCCACACCTCACTCATTGG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTCTGTGCGTAGGCTCTaGGCTATGGTACTAATGGCC +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVSVRRL*AMVLMA
Trigger: GGCCATTAGTACCATAGCCCAGAGCCTACGCACAGA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATTCTGTGCGTAGGCTCTaGGCTATGGTACTAATGGCC +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDSVRRL*AMVLMA
Trigger: GGCCATTAGTACCATAGCCCAGAGCCTACGCACAGA...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCATGTCAAACCTCCTaGCTAGCTCCAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVPCQTS*LAPGHP
Trigger: AGGATGACCTGGAGCTAGCCAGGAGGTTTGACATGG...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTCTGGGAAGCACTCTTaGTGTCGATGTGGACCATGT +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSGKHS*CRCGPC
Trigger: ACATGGTCCACATCGACACCAAGAGTGCTTCCCAGA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAACACCCCGCTCATCCTaGAGGACAATCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPTPRSS*RTICWR
Trigger: CCTCCAGCAGATTGTCCTCCAGGATGAGCGGGGTGT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTACACCCCGCTCATCCTaGAGGACAATCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVTPRSS*RTICWR
Trigger: CCTCCAGCAGATTGTCCTCCAGGATGAGCGGGGTGT...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTCGGAACTTCTCTGCCTaGTCTCGCCACTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSRNFSA*SRHCFT
Trigger: AGTGAAACAGTGGCGAGACCAGGCAGAGAAGTTCCG...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATACGCTTTTTCCTGAGTaGGACGTCACTGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDTLFPE*DVTAGV
Trigger: TACCCCAGCAGTGACGTCCCACTCAGGAAAAAGCGT...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTACGCTTTTTCCTGAGTaGGACGTCACTGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSTLFPE*DVTAGV
Trigger: TACCCCAGCAGTGACGTCCCACTCAGGAAAAAGCGT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTAGGATGATGCAGTTTTaGGCCCTCCGGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSRMMQF*ALRPSM
Trigger: CATTGATGGCCGGAGGGCCCAAAACTGCATCATCCT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTAGGATGATGCAGTTTTaGGCCCTCCGGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSRMMQF*ALRPSM
Trigger: CATTGATGGCCGGAGGGCCCAAAACTGCATCATCCT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACGGACAAACTTGTCACTaGGCTCCCGTACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDGQTCH*APVPGA
Trigger: GGCGCCAGGTACGGGAGCCCAGTGACAAGTTTGTCC...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAGTGCATCAAGGCCTTaGCGAACTTGTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVSASRP*RTCPWP
Trigger: AGGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCATCCCGGCCTCCTGTGTaGCTAGTTCCCCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPSRPPV*LVPQVN
Trigger: ATTGACCTGGGGAACTAGCCACACAGGAGGCCGGGA...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTCCTCAGAATAATACCTaGGGCCAGGGCACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSPQNNT*GQGTEG
Trigger: TCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGG...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCACATTGACTGTTCTCTaGAACCTACCAGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSTLTVL*NLPELI
Trigger: GATCAGCTCTGGTAGGTTCCAGAGAACAGTCAATGT...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGACACATGGTTCCAAGTaGCCACCTGCAGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQTHGSK*PPAGWT
Trigger: TGTCCAGCCTGCAGGTGGCCACTTGGAACCATGTGT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTCAGCCTTCCTCCTTaGCACCTTCAGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTLSLPP*HLQVMC
Trigger: GCACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAG...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACTCAGCCTTCCTCCTTaGCACCTTCAGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTLSLPP*HLQVMC
Trigger: GCACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCATGAGATGGACAAAATaGAAGGTGGCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSMRWTK*KVAVDG
Trigger: CCCATCCACTGCCACCTTCCATTTTGTCCATCTCAT...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGAACCAACGCACATGCTaGGCTCACCGACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMNQRTC*AHRPCV
Trigger: AACACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGACACTTGTCTTGCAGTaGGAGCTCTTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGETLVLQ*ELLGLQ
Trigger: CTGCAGCCCCAAGAGCTCCCACTGCAAGACAAGTGT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCAGGTTGACATCAGCCTaGTCAGTTTGGGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRRLTSA*SVWERT
Trigger: GGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTGCCAGACACGCTTGTaGAGCCCTCCCCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDCQTRL*SPPLFP
Trigger: AGGGAACAGGGGAGGGCTCCACAAGCGTGTCTGGCA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTGAGAAGGCTGAGCTCTaGAACAACGTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPEKAEL*NNVFVS
Trigger: GGACACAAATACGTTGTTCCAGAGCTCAGCCTTCTC...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGGGTCCAAGGCACTGTTaGAGATCTGGCTACAGTGGC +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQGPRHC*RSGYSG
Trigger: GCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACC...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGGAGTAGGGAGAGGCTaGAACAGACCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKGVGRG*NRPFPI
Trigger: AATGGGGAAGGGTCTGTTCCAGCCTCTCCCTACTCC...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACCCAGTTGGTGGAAATaGGATGGGAGTAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTPSWWK*DGSRER
Trigger: CCTCTCCCTACTCCCATCCCATTTCCACCAACTGGG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCTCACAGTTCCCCAGTTaGTGGAAATGGGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSSQFPS*WKWDGS
Trigger: ACTCCCATCCCATTTCCACCAACTGGGGAACTGTGA...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp GTTTGCCCCCAGGTCAATGTTCTGTTGAGCCTCCCCTaGAGAGAAGGGAGTCTGGATTCCCTCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: VCPQVNVLLSLP*REGSLDSLTRF
Trigger: GAATCTGGTGAGGGAATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTGGGGGCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp AAGGTGGCAGTGGATGGGAGGACCAGAAGGAACCCCTaGCAAGTTGGGCTGAAGAACCAAATTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: KVAVDGRTRRNP*QVGLKNQIGYQ
Trigger: CTGGTACCCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTCCTTCTGGTCCTCCCATCCACTGCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGAGCCCTCCAGCTCAATaGAGCGGGTCACAAACCTCA +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELSPPAQ*SGSQTS
Trigger: TGAGGTTTGTGACCCGCTTCATTGAGCTGGAGGGCT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGCTGCCCTTTGTTCATaGAGTTGCCTATGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSAALCS*SCLWLG
Trigger: TCCTAGCCATAGGCAACTTCATGAACAAAGGGCAGC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACGCTTCTCCAGGATCATaGTCAGGTAATGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHASPGS*SGNGAE
Trigger: CTCTGCTCCATTACCTGATCATGATCCTGGAGAAGC...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTCCAGTTCTGCTAGGTTaGCTTTGGCAGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLPVLLG*LWQLLE
Trigger: TTCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGG...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCCCAGTTCTGCTAGGTTaGCTTTGGCAGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRPVLLG*LWQLLE
Trigger: TTCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGG...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCCAGTTCTGCTAGGTTaGCTTTGGCAGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDPVLLG*LWQLLE
Trigger: TTCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGG...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAGCTTGCGGCTGCGCTTaGGCTTGCATAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVACGCA*ACISPC
Trigger: ACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGC...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGACTGCTACTCTGTCCTaGTGGCTTTGGTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQTATLS*WLWSLH
Trigger: ATGCAGGGACCAAAGCCATCAGGACAGAGTAGCAGT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAACTGCTACTCTGTCCTaGTGGCTTTGGTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKTATLS*WLWSLH
Trigger: ATGCAGGGACCAAAGCCATCAGGACAGAGTAGCAGT...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGAGGCCAGAGGACTTGTaGCATGGGAAACAGACACTG +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMRPEDL*HGKQTL
Trigger: CAGTGTCTGTTTCCCATGTCACAAGTCCTCTGGCCT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGAGGCATGAGGTGTGGTaGTGCATGAGGTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQRHEVW*CMRSVL
Trigger: CAAGACAGACCTCATGCATCACCACACCTCATGCCT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTTCATCCACCAGCTCTaGAAAGCGGATGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHFIHQL*KADVEL
Trigger: GAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTTCATCCACCAGCTCTaGAAAGCGGATGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVFIHQL*KADVEL
Trigger: GAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTCTCAGGGGGCAGTaGAAACATAGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTLLRGQ*KHSLSV
Trigger: AACCGAGAGGCTATGTTTGCACTGCCCCCTGAGAAG...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGCTTCTCAGGGGGCAGTaGAAACATAGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGELLRGQ*KHSLSV
Trigger: AACCGAGAGGCTATGTTTGCACTGCCCCCTGAGAAG...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCGCTCCTTCTTCTTGCTaGAGTAGATCTGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESAPSSC*SRSAIS
Trigger: AGAAATGGCAGATCTACTGCAGCAAGAAGAAGGAGC...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGAGGTGGCGTGGTCCATaGTCCGGAGGAAATTTAGCA +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGERWRGP*SGGNLA
Trigger: TGCTAAATTTCCTCCGGAGCATGGACCACGCCACCT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACGGAGTTGTTCATCAATaGTTTGATGCAGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHGVVHQ*FDAANE
Trigger: CTCATTGGCTGCATCAAAGCATTGATGAACAACTCC...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGTCTTGCTGTTCTCTGTaGGTAGGCTCTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQSCCSL*VGSGLW
Trigger: CCATAGCCCAGAGCCTACGCACAGAGAACAGCAAGA...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCATGGCATTTTCATGTTaGCGGAGCTTGTCAATCACA +
Preference number: 4 (lower is better)
Translates to: LLFAPSERLRGGATLRDSMAFSC*RSLSIT
Trigger: TGTGATTGACAAGCTCCGGCAACATGAAAATGCCAT...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTATCTTCAAGATGGCCTaGCGGATCTCCTCGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSIFKMA*RISSLE
Trigger: TTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGAT...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCATCTTCAAGATGGCCTaGCGGATCTCCTCGTTAGAA +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVIFKMA*RISSLE
Trigger: TTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGAT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCATCTTCAAGATGGCCTaGCGGATCTCCTCGTTAGAA +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPIFKMA*RISSLE
Trigger: TTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGAT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATATCCGCTCAATTTCATaGTTGTGCTCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDIRSIS*LCSSRR
Trigger: CCTCCTGGAGGAGCACAAGCATGAAATTGAGCGGAT...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATTTCCACTTTGGGCTTTaGCTCAGCCAGCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDFHFGL*LSQPLL
Trigger: CAGGAGCGGCTGGCTGAGGCAAAGCCCAAAGTGGAA...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGAATTCGTCTGGCTaGATCTTGCTGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSKNSSG*ILLSCS
Trigger: GGAGCATGACAGCAAGATGCAGCCAGACGAATTCTT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTGCCTCTGAGAAGGCCTaGAAGAAGGTATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSASEKA*KKVSKM
Trigger: CATCTTTGATACCTTCTTGCAGGCCTTCTCAGAGGC...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCTGGAACTGTTCTGTaGCAGCACATGGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSGTVL*QHMGAH
Trigger: ATGGGCACCCATGTGCTGGCACAGAACAGTTCCAGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCGATGGCTTTGGTCCCTaGATCATCCTTCCAACATTG +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSDGFGP*IILPTL
Trigger: CAATGTTGGAAGGATGATGCAGGGACCAAAGCCATC...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCATGGGAAACAGACACTaGTACTCTGTCCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSMGNRH*YSVLMA
Trigger: AGCCATCAGGACAGAGTAGCAGTGTCTGTTTCCCAT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGGCTGCTGTGGCTTCTaGCTTGAAGCTAGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSGCCGF*LEASVR
Trigger: TCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGCCAGTTTCCCTTGCCTaGTCTGCTGTTCGCACCATC +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELPVSLA*SAVRTI
Trigger: GATGGTGCGAACAGCAGAGCAGGCAAGGGAAACTGG...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTTGGAAGCCTTCATCTTaGCCTCACCTGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVWKPSS*PHLGSR
Trigger: CCTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCA...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTCTCTGCAGCTGTTCTaGCTGGAAGCCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRSLQLF*LEAFIL
Trigger: CAAGATGAAGGCTTCCAGGCAGAACAGCTGCAGAGA...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATAGGAAGCCCAGGCCATaGTGGCTCCTCTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNRKPRP*WLLLRG
Trigger: CCCCCGCAAGAGGAGCCACCATGGCCTGGGCTTCCT...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAAATAGTCAGGCCAGCTaGTTGCCAGCTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKNSQAS*LPACWG
Trigger: ACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATT...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACCAATGAGTGAGGTGTaGATGCGGCTCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRPMSEV*MRLSQV
Trigger: CACCTGTGAGAGCCGCATCCACACCTCACTCATTGG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCTGTGCGTAGGCTCTaGGCTATGGTACTAATGGCC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSVRRL*AMVLMA
Trigger: GGCCATTAGTACCATAGCCCAGAGCCTACGCACAGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCCATGTCAAACCTCCTaGCTAGCTCCAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMPCQTS*LAPGHP
Trigger: AGGATGACCTGGAGCTAGCCAGGAGGTTTGACATGG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTCTGGGAAGCACTCTTaGTGTCGATGTGGACCATGT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSSGKHS*CRCGPC
Trigger: ACATGGTCCACATCGACACCAAGAGTGCTTCCCAGA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTCTGGGAAGCACTCTTaGTGTCGATGTGGACCATGT +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSGKHS*CRCGPC
Trigger: ACATGGTCCACATCGACACCAAGAGTGCTTCCCAGA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACGGAACTTCTCTGCCTaGTCTCGCCACTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTRNFSA*SRHCFT
Trigger: AGTGAAACAGTGGCGAGACCAGGCAGAGAAGTTCCG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCGTGGAGGCAGGTCATTaGTTGTCATTGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSVEAGH*LSLRKT
Trigger: TGTCTTCCTCAATGACAACCAATGACCTGCCTCCAC...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGTTGAAGGACTTCAGTaGGTGAGAAGGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELVEGLQ*VRRLGD
Trigger: GTCCCCCAGCCTTCTCACCCACTGAAGTCCTTCAAC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTGTTGAAGGACTTCAGTaGGTGAGAAGGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVVEGLQ*VRRLGD
Trigger: GTCCCCCAGCCTTCTCACCCACTGAAGTCCTTCAAC...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGAGGATGATGCAGTTTTaGGCCCTCCGGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQRMMQF*ALRPSM
Trigger: CATTGATGGCCGGAGGGCCCAAAACTGCATCATCCT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAACATCCATCTTCAAGATaGCCTGCCGGATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKHPSSR*PAGSPR
Trigger: ACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATG...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATaGGTGCCCATGGTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELFCAST*VPMVGD
Trigger: ATCCCCTACCATGGGCACCCATGTGCTGGCACAGAA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCAGGAGATGGGGACATaGGAGATGCCCAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMQEMGT*EMPKRH
Trigger: ATGCCTTTTGGGCATCTCCCATGTCCCCATCTCCTG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCTGGCTTCACAACAATaGCCAGGTGTCCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMLASQQ*PGVQEM
Trigger: CATCTCCTGGACACCTGGCCATTGTTGTGAAGCCAG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTGAACCCCTTGCAAGTTaGGCTGAAGAACCAAATTGG +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSEPLAS*AEEPNW
Trigger: CCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTC...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCGAACCCCTTGCAAGTTaGGCTGAAGAACCAAATTGG +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSEPLAS*AEEPNW
Trigger: CCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTC...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACGAAGGTGGCAGTGGATaGGAGGACCAGAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDEGGSG*EDQKEP
Trigger: GGGTTCCTTCTGGTCCTCCCATCCACTGCCACCTTC...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCAAGGCCAGCATGAGATaGACAAAATGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVKASMR*TKWKVA
Trigger: TGCCACCTTCCATTTTGTCCATCTCATGCTGGCCTT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAAACCAACGCACATGCTaGGCTCACCGACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPNQRTC*AHRPCV
Trigger: AACACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACATCTTGCCCTCACCTaGGTTCCAGGATGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVHLALT*VPGWPL
Trigger: AAGAGGCCATCCTGGAACCCAGGTGAGGGCAAGATG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGAGGTTGACATCAGCCTaGTCAGTTTGGGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQRLTSA*SVWERT
Trigger: GGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAGTCTTCCATGGTGGGTaGGAATGCCAGACACGCTTG +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVVFHGG*ECQTRL
Trigger: CAAGCGTGTCTGGCATTCCCACCCACCATGGAAGAC...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTCCAGTCTTCCATGGTaGGTGGGAATGCCAGACACG +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELSSLPW*VGMPDT
Trigger: CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGCACTGTTGGAGATCTaGCTACAGTGGCATCTAGCA +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSALLEI*LQWHLA
Trigger: TGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAGGTCCAAGGCACTGTTaGAGATCTGGCTACAGTGGC +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRGPRHC*RSGYSG
Trigger: GCCACTGTAGCCAGATCTCCAACAGTGCCTTGGACC...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTTCCCCATTCACCTaGAGAATTTTCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSPSPFT*RIFSSH
Trigger: GTGGGAGGAGAAAATTCTCCAGGTGAATGGGGAAGG...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp CCATCTTCCCCAACACTTGTCTTGCAGTGGGAGCTCTaGGGGCTGCAGATGCATATAGCCAAACTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSSPTLVLQWEL*GLQMHIAKLSA
Trigger: TGCAGAGAGTTTGGCTATATGCATCTGCAGCCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGGAAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTCGCAGCCATGGAATTaGTGCGGTCGATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSQPWN*CGRCNS
Trigger: ACTATTACATCGACCGCATCAATTCCATGGCTGCGA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGTCATTGGTTGTCATTaGGGAAGACAAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSVIGCH*GRQGEW
Trigger: CCACTCACCTTGTCTTCCTCAATGACAACCAATGAC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAACTTGGAAAGAAGGATaGTGCAGTTTTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKTWKEG*CSFGPS
Trigger: GGAGGGCCCAAAACTGCATCATCCTTCTTTCCAAGT...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAGCTGCCCTTTGTTCATaGAGTTGCCTATGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVAALCS*SCLWLG
Trigger: TCCTAGCCATAGGCAACTTCATGAACAAAGGGCAGC...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGATGCCCAAAAGGCATaGGGTGTGGTGATGCATGAG +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELDAQKA*GVVMHE
Trigger: CTCATGCATCACCACACCTCATGCCTTTTGGGCATC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCCCAGCTCTTTCTGCTaGGAAGGATTAGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDPSSFC*EGLVIS
Trigger: GCTGATAACTAATCCTTCTCAGCAGAAAGAGCTGGG...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633794.1
CDS-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACGAGAACTCCATGAACTaGAGAGGGTGGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDENSMN*RGWLSR
Trigger: CCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTC...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCCTGCTCCTTCTTCTTaGTGCAGTAGATCTGCCATT +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHPAPSS*CSRSAI
Trigger: AATGGCAGATCTACTGCAGCAAGAAGAAGGAGCAGG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTCCTGCTCCTTCTTCTTaGTGCAGTAGATCTGCCATT +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSPAPSS*CSRSAI
Trigger: AATGGCAGATCTACTGCAGCAAGAAGAAGGAGCAGG...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATTGTTGGGGTCCTCCTaGTCCTTCTTCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVLLGSS*SFFLLQ
Trigger: CTGCAGCAAGAAGAAGGAGCAGGAGGACCCCAACAA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAAGGTGGCGTGGTCCATaGTCCGGAGGAAATTTAGCA +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVRWRGP*SGGNLA
Trigger: TGCTAAATTTCCTCCGGAGCATGGACCACGCCACCT...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTTTCCGGAACTTCTCTaGCTGGTCTCGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEFPELL*LVSPLF
Trigger: AAACAGTGGCGAGACCAGGCAGAGAAGTTCCGGAAA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGTTTCCGGAACTTCTCTaGCTGGTCTCGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTFPELL*LVSPLF
Trigger: AAACAGTGGCGAGACCAGGCAGAGAAGTTCCGGAAA...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTTAGCAAGGTCCTCCTaGTCATCCATCTTCAAGATG +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVLARSS*SSIFKM
Trigger: CATCTTGAAGATGGATGAGCAGGAGGACCTTGCTAA...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTGGTAGTGGTCAATCCTaGTCATTTCATAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSGSGQS*SFHRGS
Trigger: GCTTCCTCTATGAAATGAGCAGGATTGACCACTACC...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTAGATGTTTCTGTCGATaGTGGACTTGGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLRCFCR*WTWCQR
Trigger: TCGCTGACACCAAGTCCAGCATCGACAGAAACATCT...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGCTTCTGGAAGATGTTaGAGCTCTGAAGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPASGRC*SSEGMF
Trigger: AAACATGCCTTCAGAGCTGCAACATCTTCCAGAAGC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATTCATGCTCCCCGAAGTaGATCAAGGCCTTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDSCSPK*IKALAN
Trigger: GTTCGCCAAGGCCTTGATGCACTTCGGGGAGCATGA...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTGCATCTTGCTGTCATaGTCCCCGAAGTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGECILLS*SPKCIK
Trigger: CTTGATGCACTTCGGGGAGCATGACAGCAAGATGCA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTATGCATCTTGCTGTCATaGTCCCCGAAGTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVCILLS*SPKCIK
Trigger: CTTGATGCACTTCGGGGAGCATGACAGCAAGATGCA...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGCCTCTGAGAAGGCCTaGAAGAAGGTATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSASEKA*KKVSKM
Trigger: CATCTTTGATACCTTCTTGCAGGCCTTCTCAGAGGC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAACGCTCACGTTCCCTCTaGTCCTTCAGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMERSRSL*SFSMAS
Trigger: GGAAGCCATGCTGAAGGAGCAGAGGGAACGTGAGCG...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACATCATTGCTCCCCGTaGTACACAGGAACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVHHCSP*YTGTLD
Trigger: GTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGATGGCTTTGGTCCCTaGATCATCCTTCCAACATTG +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSDGFGP*IILPTL
Trigger: CAATGTTGGAAGGATGATGCAGGGACCAAAGCCATC...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGGCTGCTGTGGCTTCTaGCTTGAAGCTAGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTGCCGF*LEASVR
Trigger: TCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTCAAACCAACGCACATaGTGGGCTCACCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDSNQRT*WAHRPC
Trigger: ACAGGGTCGGTGAGCCCAGCATGTGCGTTGGTTTGA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATTGTGTCAGCCAGGCTTaGACTTGCTCAGATCCCTCC +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDCVSQA*TCSDPS
Trigger: GGAGGGATCTGAGCAAGTGCAAGCCTGGCTGACACA...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTATAGCCAAACTCTCTaGAGCTGTTCTGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSYSQTL*SCSAWK
Trigger: CTTCCAGGCAGAACAGCTGCAGAGAGTTTGGCTATA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATTATAGCCAAACTCTCTaGAGCTGTTCTGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDYSQTL*SCSAWK
Trigger: CTTCCAGGCAGAACAGCTGCAGAGAGTTTGGCTATA...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CACAAACCTCATAGGCTGTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGAGAGAGTCCAGACTCTaGTTCTTTGTCTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HKPHRLCPEGCLQVFHDLRESRL*FFVCLP
Trigger: TGGGAGACAGACAAAGAAGCAGAGTCTGGACTCTCT...CAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACACAGCCTATGAGGTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAATGAACTGCAGAGGGTaGTTGTCCCGGAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTMNCRG*LSRRLI
Trigger: AATCAACCTCCGGGACAACCACCCTCTGCAGTTCAT...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTACATGTGCCCGCCCCTaGGAGTTGTTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVTCARP*ELFINA
Trigger: AGCATTGATGAACAACTCCCAGGGGCGGGCACATGT...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTAATGTTTGTCCAGGATaGCATTTTCATGTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVNVCPG*HFHVAG
Trigger: TCCGGCAACATGAAAATGCCATCCTGGACAAACATT...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTAATGTTTGTCCAGGATaGCATTTTCATGTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GCCGFCLEASVREGVGGPNVCPG*HFHVAG
Trigger: TCCGGCAACATGAAAATGCCATCCTGGACAAACATT...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGCCATGTCAAACCTCCTaGCTAGCTCCAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELPCQTS*LAPGHP
Trigger: AGGATGACCTGGAGCTAGCCAGGAGGTTTGACATGG...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTATCAACTCAAACATCTaGGAAGCACTCTTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSINSNI*EALLVS
Trigger: CGACACCAAGAGTGCTTCCCAGATGTTTGAGTTGAT...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACTACTTCAGCTTCTTGTaGATCAACTCAAACATCTGG +
Preference number: 4 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHYFSFL*INSNIW
Trigger: CCAGATGTTTGAGTTGATCCACAAGAAGCTGAAGTA...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACGGAACTTCTCTGCCTaGTCTCGCCACTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVRNFSA*SRHCFT
Trigger: AGTGAAACAGTGGCGAGACCAGGCAGAGAAGTTCCG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAACAGAGGAGGAGGGGGTaGAGGCAGGTCATTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEQRRRG*RQVIGC
Trigger: ACAACCAATGACCTGCCTCCACCCCCTCCTCCTCTG...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAACGCTTTTTCCTGAGTaGGACGTCACTGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRTLFPE*DVTAGV
Trigger: TACCCCAGCAGTGACGTCCCACTCAGGAAAAAGCGT...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCAATGTCACTCTTCTCTaGGATGAACTTGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VDLSSLDLELFCASTWVPNVTLL*DELEEL
Trigger: CAGCTCCTCAAGTTCATCCCAGAGAAGAGTGACATT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTCAGCCAGCCGCTCCTaGAATTTCTTCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSSASRS*NFFLKK
Trigger: CTTCTTCAAGAAGAAATTCCAGGAGCGGCTGGCTGA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTGTTTCTGTCGATGCTaGACTTGGTGTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRCFCRC*TWCQRS
Trigger: AGATCGCTGACACCAAGTCCAGCATCGACAGAAACA...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACCTCAGAATAATACCTaGGGCCAGGGCACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPPQNNT*GQGTEG
Trigger: TCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCAGTCTTCTAGGACTGTaGATTAGTAGACAGGATGGA +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSSLLGL*ISRQDG
Trigger: TCCATCCTGTCTACTAATCCACAGTCCTAGAAGACT...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGCAGGAGATGGGGACATaGGAGATGCCCAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELQEMGT*EMPKRH
Trigger: ATGCCTTTTGGGCATCTCCCATGTCCCCATCTCCTG...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTTTTGAGGTCACTGTCTaGCTTCACAACAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLFEVTV*LHNNGQ
Trigger: CTGGCCATTGTTGTGAAGCCAGACAGTGACCTCAAA...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACAAGGCCAGCATGAGATaGACAAAATGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHKASMR*TKWKVA
Trigger: TGCCACCTTCCATTTTGTCCATCTCATGCTGGCCTT...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAAGGTTGACATCAGCCTaGTCAGTTTGGGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPRLTSA*SVWERT
Trigger: GGTCCTCTCCCAAACTGACCAGGCTGATGTCAACCT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTCCAGTCTTCCATGGTaGGTGGGAATGCCAGACACG +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDSSLPW*VGMPDT
Trigger: CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGTATCCAGTCTTCCATaGTGGGTGGGAATGCCAGAC +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELVSSLP*WVGMPD
Trigger: GTCTGGCATTCCCACCCACCATGGAAGACTGGATAC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGGCACTGTTGGAGATCTaGCTACAGTGGCATCTAGCA +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEALLEI*LQWHLA
Trigger: TGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGC...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGCACTGTTGGAGATCTaGCTACAGTGGCATCTAGCA +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTALLEI*LQWHLA
Trigger: TGCTAGATGCCACTGTAGCCAGATCTCCAACAGTGC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTTGAGTATGAGTCCATaGTCCAAGGCACTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSLSMSP*SKALLE
Trigger: CTCCAACAGTGCCTTGGACCATGGACTCATACTCAA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACAGTTCCCCAGTTGGTaGAAATGGGATGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPQFPSW*KWDGSR
Trigger: CCTACTCCCATCCCATTTCCACCAACTGGGGAACTG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCAGTTCCCCAGTTGGTaGAAATGGGATGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVQFPSW*KWDGSR
Trigger: CCTACTCCCATCCCATTTCCACCAACTGGGGAACTG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCACAGTTCCCCAGTTaGTGGAAATGGGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSQFPS*WKWDGS
Trigger: ACTCCCATCCCATTTCCACCAACTGGGGAACTGTGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGGTAGATGTCTTCAGTaGAGCCCAGCTCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTGRCLQ*SPALSA
Trigger: AGCAGAAAGAGCTGGGCTCCACTGAAGACATCTACC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633794.1
CDS-3UTR TCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGTCGCAGCCATGGAATTaGTGCGGTCGATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQSQPWN*CGRCNS
Trigger: ACTATTACATCGACCGCATCAATTCCATGGCTGCGA...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAACTGTTGAGAGTTCACTaGGCTGGGCTACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMELLRVH*AGLPAL
Trigger: CAGAGCTGGTAGCCCAGCTCAGTGAACTCTCAACAG...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGCTGCCCTTTGTTCATaGAGTTGCCTATGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPAALCS*SCLWLG
Trigger: TCCTAGCCATAGGCAACTTCATGAACAAAGGGCAGC...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGCTGCCCTTTGTTCATaGAGTTGCCTATGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELAALCS*SCLWLG
Trigger: TCCTAGCCATAGGCAACTTCATGAACAAAGGGCAGC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR TCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCCTTGCAAGTTGGGCTaGAGAACCAAATTGGGTACC +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVPCKLG*RTKLGT
Trigger: GGTACCCAATTTGGTTCTTCAGCCCAACTTGCAAGG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACCTTGCAAGTTGGGCTaGAGAACCAAATTGGGTACC +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRPCKLG*RTKLGT
Trigger: GGTACCCAATTTGGTTCTTCAGCCCAACTTGCAAGG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTACAGTCTCAAAGAAGATaGAAGGCCAACTCGGAACGT +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVQSQRR*KANSER
Trigger: ACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTG...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAGGAGTTGGATGCAAGTaGAAGGCAGAAGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVGVGCK*KAEDRQ
Trigger: CTGCCTATCTTCTGCCTTTCACTTGCATCCAACTCC...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGGCTCCTTCTTCTTGCTaGAGTAGATCTGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVAPSSC*SRSAIS
Trigger: AGAAATGGCAGATCTACTGCAGCAAGAAGAAGGAGC...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCCTGCTCCTTCTTCTTaGTGCAGTAGATCTGCCATT +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMPAPSS*CSRSAI
Trigger: AATGGCAGATCTACTGCAGCAAGAAGAAGGAGCAGG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGGAGTTGTTCATCAATaGTTTGATGCAGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: IAPRATQELWTRLWTSPVGVVHQ*FDAANE
Trigger: CTCATTGGCTGCATCAAAGCATTGATGAACAACTCC...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTCTTGCTGTTCTCTGTaGGTAGGCTCTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDSCCSL*VGSGLW
Trigger: CCATAGCCCAGAGCCTACGCACAGAGAACAGCAAGA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTTCCGGAACTTCTCTaGCTGGTCTCGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELFPELL*LVSPLF
Trigger: AAACAGTGGCGAGACCAGGCAGAGAAGTTCCGGAAA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTCTCATTCCATACGGTaGCAGGGACACGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDSHSIR*QGHAPH
Trigger: ATGAGGAGCGTGTCCCTGGCACCGTATGGAATGAGA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTTAGCAAGGTCCTCCTaGTCATCCATCTTCAAGATG +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHLARSS*SSIFKM
Trigger: CATCTTGAAGATGGATGAGCAGGAGGACCTTGCTAA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGAGATGTTTCTGTCGATaGTGGACTTGGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGERCFCR*WTWCQR
Trigger: TCGCTGACACCAAGTCCAGCATCGACAGAAACATCT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCGCTTCTGGAAGATGTTaGAGCTCTGAAGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRASGRC*SSEGMF
Trigger: AAACATGCCTTCAGAGCTGCAACATCTTCCAGAAGC...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAAAGAATTCGTCTGGCTaGATCTTGCTGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTKNSSG*ILLSCS
Trigger: GGAGCATGACAGCAAGATGCAGCCAGACGAATTCTT...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGAAGAATTCGTCTGGCTaGATCTTGCTGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEKNSSG*ILLSCS
Trigger: GGAGCATGACAGCAAGATGCAGCCAGACGAATTCTT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGGCCTCTGAGAAGGCCTaGAAGAAGGTATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEASEKA*KKVSKM
Trigger: CATCTTTGATACCTTCTTGCAGGCCTTCTCAGAGGC...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATTTCCAAGTGGCCACCTaGAGGCTGGACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNFQVAT*RLDRGC
Trigger: GCAGCCTCTGTCCAGCCTGCAGGTGGCCACTTGGAA...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTACCAGTTTCCCTTGCCTaGTCTGCTGTTCGCACCATC +
Preference number: 4 (lower is better)
Translates to: GWEGLSNLYEVENYGMELPVSLA*SAVRTI
Trigger: GATGGTGCGAACAGCAGAGCAGGCAAGGGAAACTGG...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAATATAGCCAAACTCTCTaGAGCTGTTCTGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKYSQTL*SCSAWK
Trigger: CTTCCAGGCAGAACAGCTGCAGAGAGTTTGGCTATA...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCATTTTCTCCTCCCACTaGCCTAAACACTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSIFSSH*PKHFIS
Trigger: GGAAATAAAGTGTTTAGGGCAGTGGGAGGAGAAAAT...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTATGGTTGCCAGCTTGTTaGGGTCCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GWEGLSNLYEVENYGMELWLPAC*GPPAPS
Trigger: AGAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCA...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGATCAACTCAAACATCTaGGAAGCACTCTTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVINSNI*EALLVS
Trigger: CGACACCAAGAGTGCTTCCCAGATGTTTGAGTTGAT...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGTGGAGGCAGGTCATTaGTTGTCATTGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMVEAGH*LSLRKT
Trigger: TGTCTTCCTCAATGACAACCAATGACCTGCCTCCAC...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAGGTAGATGTCTTCAGTaGAGCCCAGCTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVGRCLQ*SPALSG
Trigger: ACCAGAAAGAGCTGGGCTCCACTGAAGACATCTACC...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTCAGCCAGCCGCTCCTaGAATTTCTTCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMSASRS*NFFLKK
Trigger: CTTCTTCAAGAAGAAATTCCAGGAGCGGCTGGCTGA...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTTTCTGTCGATGCTaGACTTGGTGTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTCFCRC*TWCQRS
Trigger: AGATCGCTGACACCAAGTCCAGCATCGACAGAAACA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAAACCAAGCACCAAATaGTTTAAATATCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GAPSIIAPRATQELWTRLKPSTK*FKYHHL
Trigger: GAGGTGGTGATATTTAAACCATTTGGTGCTTGGTTT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTACATTGACTGTTCTCTaGAACCTACCAGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSTLTVL*NLPELI
Trigger: GATCAGCTCTGGTAGGTTCCAGAGAACAGTCAATGT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACAGAGGACTTGTGACATaGGAAACAGACACTGCTACT +
Preference number: 4 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHRGLVT*ETDTAT
Trigger: AGTAGCAGTGTCTGTTTCCCATGTCACAAGTCCTCT...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATAGAGGACTTGTGACATaGGAAACAGACACTGCTACT +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDRGLVT*ETDTAT
Trigger: AGTAGCAGTGTCTGTTTCCCATGTCACAAGTCCTCT...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGATGAGATGGACAAAATaGAAGGTGGCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEMRWTK*KVAVDG
Trigger: CCCATCCACTGCCACCTTCCATTTTGTCCATCTCAT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAAGGCCAGCATGAGATaGACAAAATGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVKASMR*TKWKVA
Trigger: TGCCACCTTCCATTTTGTCCATCTCATGCTGGCCTT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGGAGAAGGCTGAGCTCTaGAACAACGTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGEEKAEL*NNVFVS
Trigger: GGACACAAATACGTTGTTCCAGAGCTCAGCCTTCTC...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGAGATCTGGCTACAGTaGCATCTAGCACCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDEIWLQ*HLAPEP
Trigger: TGGCTCTGGTGCTAGATGCCACTGTAGCCAGATCTC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGTCATTGGTTGTCATTaGGGAAGACAAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPVIGCH*GRQGEW
Trigger: CCACTCACCTTGTCTTCCTCAATGACAACCAATGAC...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAGTCATTGGTTGTCATTaGGGAAGACAAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRVIGCH*GRQGEW
Trigger: CCACTCACCTTGTCTTCCTCAATGACAACCAATGAC...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACCCAGTTCTGCTAGGTTaGCTTTGGCAGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDPVLLG*LWQLLE
Trigger: TTCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGG...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAACCACCAAGGCCAGCATaGGATGGACAAAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEPPRPA*DGQNGR
Trigger: CCTTCCATTTTGTCCATCTCATGCTGGCCTTGGTGG...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCAGTCTCAAAGAAGATaGAAGGCCAACTCGGAACGT +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVQSQRR*KANSER
Trigger: ACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACGGAGTTGGATGCAAGTaGAAGGCAGAAGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDGVGCK*KAEDRQ
Trigger: CTGCCTATCTTCTGCCTTTCACTTGCATCCAACTCC...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGCTCCTTCTTCTTGCTaGAGTAGATCTGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTAPSSC*SRSAIS
Trigger: AGAAATGGCAGATCTACTGCAGCAAGAAGAAGGAGC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCCTGCTCCTTCTTCTTaGTGCAGTAGATCTGCCATT +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVPAPSS*CSRSAI
Trigger: AATGGCAGATCTACTGCAGCAAGAAGAAGGAGCAGG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTCAATTTCATGCTTGTaGTCCTCCAGGAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGESISCL*SSRRSM
Trigger: CATTGACCTCCTGGAGGAGCACAAGCATGAAATTGA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTATCAATTTCATGCTTGTaGTCCTCCAGGAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVSISCL*SSRRSM
Trigger: CATTGACCTCCTGGAGGAGCACAAGCATGAAATTGA...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGGTAGTGGTCAATCCTaGTCATTTCATAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKGSGQS*SFHRGS
Trigger: GCTTCCTCTATGAAATGAGCAGGATTGACCACTACC...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAGGTAGTGGTCAATCCTaGTCATTTCATAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTGSGQS*SFHRGS
Trigger: GCTTCCTCTATGAAATGAGCAGGATTGACCACTACC...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGCCTCTGAGAAGGCCTaGAAGAAGGTATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELASEKA*KKVSKM
Trigger: CATCTTTGATACCTTCTTGCAGGCCTTCTCAGAGGC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAGATGGCTTTGGTCCCTaGATCATCCTTCCAACATTG +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVDGFGP*IILPTL
Trigger: CAATGTTGGAAGGATGATGCAGGGACCAAAGCCATC...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGATGGGAAACAGACACTaGTACTCTGTCCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELMGNRH*YSVLMA
Trigger: AGCCATCAGGACAGAGTAGCAGTGTCTGTTTCCCAT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTAAGATACTTAAGACATaGAGGGAGAGGCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVKILKT*RERPED
Trigger: GTCCTCTGGCCTCTCCCTGCATGTCTTAAGTATCTT...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAAAGATACTTAAGACATaGAGGGAGAGGCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRKILKT*RERPED
Trigger: GTCCTCTGGCCTCTCCCTGCATGTCTTAAGTATCTT...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACCTTTTGTTTCCAGGTaGGTATCCAGTCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRPFVSR*VSSLPW
Trigger: CCATGGAAGACTGGATACGCACCTGGAAACAAAAGG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCATTTTCTCCTCCCACTaGCCTAAACACTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSIFSSH*PKHFIS
Trigger: GGAAATAAAGTGTTTAGGGCAGTGGGAGGAGAAAAT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAACATGTGCCCGCCCCTaGGAGTTGTTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: GWEGLSNLYEVENYGMELTCARP*ELFINA
Trigger: AGCATTGATGAACAACTCCCAGGGGCGGGCACATGT...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTAATGTTTGTCCAGGATaGCATTTTCATGTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSNVCPG*HFHVAG
Trigger: TCCGGCAACATGAAAATGCCATCCTGGACAAACATT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAATCAACTCAAACATCTaGGAAGCACTCTTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKINSNI*EALLVS
Trigger: CGACACCAAGAGTGCTTCCCAGATGTTTGAGTTGAT...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTACTTCAGCTTCTTGTaGATCAACTCAAACATCTGG +
Preference number: 4 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSYFSFL*INSNIW
Trigger: CCAGATGTTTGAGTTGATCCACAAGAAGCTGAAGTA...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAATGTCACTCTTCTCTaGGATGAACTTGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVNVTLL*DELEEL
Trigger: CAGCTCCTCAAGTTCATCCCAGAGAAGAGTGACATT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGAATGTCACTCTTCTCTaGGATGAACTTGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQNVTLL*DELEEL
Trigger: CAGCTCCTCAAGTTCATCCCAGAGAAGAGTGACATT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTTCAGCCAGCCGCTCCTaGAATTTCTTCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVSASRS*NFFLKK
Trigger: CTTCTTCAAGAAGAAATTCCAGGAGCGGCTGGCTGA...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATGTTTCTGTCGATGCTaGACTTGGTGTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVCFCRC*TWCQRS
Trigger: AGATCGCTGACACCAAGTCCAGCATCGACAGAAACA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGATGTTTCTGTCGATGCTaGACTTGGTGTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRCFCRC*TWCQRS
Trigger: AGATCGCTGACACCAAGTCCAGCATCGACAGAAACA...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGACATTGACTGTTCTCTaGAACCTACCAGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQTLTVL*NLPELI
Trigger: GATCAGCTCTGGTAGGTTCCAGAGAACAGTCAATGT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTAGTCTTCTAGGACTGTaGATTAGTAGACAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSLLGL*ISRQDG
Trigger: TCCATCCTGTCTACTAATCCACAGTCCTAGAAGACT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATTTGAGGTCACTGTCTaGCTTCACAACAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVFEVTV*LHNNGQ
Trigger: CTGGCCATTGTTGTGAAGCCAGACAGTGACCTCAAA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGATGAGATGGACAAAATaGAAGGTGGCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELMRWTK*KVAVDG
Trigger: CCCATCCACTGCCACCTTCCATTTTGTCCATCTCAT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAGTATCCAGTCTTCCATaGTGGGTGGGAATGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GWEGLSNLYEVENYGMELVSSLP*WVGMPD
Trigger: GTCTGGCATTCCCACCCACCATGGAAGACTGGATAC...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCCTTCCCCATTCACCTaGAGAATTTTCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDPSPFT*RIFSSH
Trigger: GTGGGAGGAGAAAATTCTCCAGGTGAATGGGGAAGG...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATACAGAAGGAATCATGTaGAGGGGAGATAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDTEGIM*RGDKRS
Trigger: GCTCCTCTTATCTCCCCTTCACATGATTCCTTCTGT...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACCTCGGAACGTGGTATTaGATAAGAGCCTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDLGTWY*IRALME
Trigger: CTCCATCAAGGCTCTTATTCAATACCACGTTCCGAG...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAGATCAAATGTATCTTaGACAGCTTCCATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSRSNVS*TASIVL
Trigger: AAGGACTATGGAAGCTGTTCAAGATACATTTGATCT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AAACGCGTACAGACTCTGCATCGCAGCCATGGAATTGATGCGGTCGATGTAATATTCATCCACCAGCTCTaGAAAGCGGATGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KRVQTLHRSHGIDAVDVIFIHQL*KADVEL
Trigger: GAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAA...TATTACATCGACCGCATCAATTCCATGGCTGCGATGCAGAGTCTGTACGCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGATGGCATTTTCATGTTaGCGGAGCTTGTCAATCACA +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMMAFSC*RSLSIT
Trigger: TGTGATTGACAAGCTCCGGCAACATGAAAATGCCAT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTAGCAAGGTCCTCCTaGTCATCCATCTTCAAGATG +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELLARSS*SSIFKM
Trigger: CATCTTGAAGATGGATGAGCAGGAGGACCTTGCTAA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTCAATTTCATGCTTGTaGTCCTCCAGGAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELSISCL*SSRRSM
Trigger: CATTGACCTCCTGGAGGAGCACAAGCATGAAATTGA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTGGTAGTGGTCAATCCTaGTCATTTCATAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVGSGQS*SFHRGS
Trigger: GCTTCCTCTATGAAATGAGCAGGATTGACCACTACC...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAGCTTCTGGAAGATGTTaGAGCTCTGAAGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRASGRC*SSEGMF
Trigger: AAACATGCCTTCAGAGCTGCAACATCTTCCAGAAGC...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTGCTTCTGGAAGATGTTaGAGCTCTGAAGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVASGRC*SSEGMF
Trigger: AAACATGCCTTCAGAGCTGCAACATCTTCCAGAAGC...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAATGAACTGCAGAGGGTaGTTGTCCCGGAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: GWEGLSNLYEVENYGMELMNCRG*LSRRLI
Trigger: AATCAACCTCCGGGACAACCACCCTCTGCAGTTCAT...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTACTTCAGCTTCTTGTaGATCAACTCAAACATCTGG +
Preference number: 4 (lower is better)
Translates to: AVDLSSLDLELFCASTWVYFSFL*INSNIW
Trigger: CCAGATGTTTGAGTTGATCCACAAGAAGCTGAAGTA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACGTGGAGGCAGGTCATTaGTTGTCATTGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDVEAGH*LSLRKT
Trigger: TGTCTTCCTCAATGACAACCAATGACCTGCCTCCAC...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAAGGTAGATGTCTTCAGTaGAGCCCAGCTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEGRCLQ*SPALSG
Trigger: ACCAGAAAGAGCTGGGCTCCACTGAAGACATCTACC...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGAAATGTCACTCTTCTCTaGGATGAACTTGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRNVTLL*DELEEL
Trigger: CAGCTCCTCAAGTTCATCCCAGAGAAGAGTGACATT...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATCTGGCCTCATTTAGCTaGTCCTCCAGCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNLASFS*SSSSEK
Trigger: CTTCTCCGAGCTGGAGGACCAGCTAAATGAGGCCAG...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTAAACCAAGCACCAAATaGTTTAAATATCACCACCTC +
Preference number: 4 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSKPSTK*FKYHHL
Trigger: GAGGTGGTGATATTTAAACCATTTGGTGCTTGGTTT...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAAGAGGACTTGTGACATaGGAAACAGACACTGCTACT +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPRGLVT*ETDTAT
Trigger: AGTAGCAGTGTCTGTTTCCCATGTCACAAGTCCTCT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAAGTGTTAGAGAAGGGGTaGGAGGGCCTGAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEVLEKG*EGLSNL
Trigger: TAAATTGCTCAGGCCCTCCCACCCCTTCTCTAACAC...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATACCTGGGTTCCAGGATaGCCTCTTCACACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNTWVPG*PLHTCV
Trigger: GACACAGGTGTGAAGAGGCCATCCTGGAACCCAGGT...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp TATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTaGCCCCCAGGTCAATGTTCTGTTGAGCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: YNASSVPIQEES*PPGQCSVEPPL
Trigger: AAGGGGAGGCTCAACAGAACATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAACTCGGAACGTGGTATTaGATAAGAGCCTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMELGTWY*IRALME
Trigger: CTCCATCAAGGCTCTTATTCAATACCACGTTCCGAG...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATAGATCAAATGTATCTTaGACAGCTTCCATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDRSNVS*TASIVL
Trigger: AAGGACTATGGAAGCTGTTCAAGATACATTTGATCT...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATTTGTTGGGGTCCTCCTaGTCCTTCTTCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNLLGSS*SFFLLQ
Trigger: CTGCAGCAAGAAGAAGGAGCAGGAGGACCCCAACAA...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGGAGTTGTTCATCAATaGTTTGATGCAGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELGVVHQ*FDAANE
Trigger: CTCATTGGCTGCATCAAAGCATTGATGAACAACTCC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAATGGCATTTTCATGTTaGCGGAGCTTGTCAATCACA +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVMAFSC*RSLSIT
Trigger: TGTGATTGACAAGCTCCGGCAACATGAAAATGCCAT...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGAGGATCCGAAATACCTaGATGTCATCAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: SLRIIPGARAQKESCEGERIRNT*MSSISF
Trigger: GAATGAGATTGATGACATGCAGGTATTTCGGATCCT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGAGGATCCGAAATACCTaGATGTCATCAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTRIRNT*MSSISF
Trigger: GAATGAGATTGATGACATGCAGGTATTTCGGATCCT...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGAGGATCCGAAATACCTaGATGTCATCAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMRIRNT*MSSISF
Trigger: GAATGAGATTGATGACATGCAGGTATTTCGGATCCT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR GCA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGAGAAGGTATCAAAGATaGCAAAGAATTCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTRRYQR*QRIRLA
Trigger: AGCCAGACGAATTCTTTGGCATCTTTGATACCTTCT...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAGAAGGTATCAAAGATaGCAAAGAATTCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVRRYQR*QRIRLA
Trigger: AGCCAGACGAATTCTTTGGCATCTTTGATACCTTCT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTAATGTTTGTCCAGGATaGCATTTTCATGTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVNVCPG*HFHVAG
Trigger: TCCGGCAACATGAAAATGCCATCCTGGACAAACATT...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CCA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGAGTCTTCTAGGACTGTaGATTAGTAGACAGGATGGA +
Preference number: 4 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELSLLGL*ISRQDG
Trigger: TCCATCCTGTCTACTAATCCACAGTCCTAGAAGACT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAAGAACCCCTTGCAAGTTaGGCTGAAGAACCAAATTGG +
Preference number: 4 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEEPLAS*AEEPNW
Trigger: CCAATTTGGTTCTTCAGCCCAACTTGCAAGGGGTTC...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACCTGAGCAATTTATATaGAGTAGAGAACTATGGGAT +
Preference number: 4 (lower is better)
Translates to: DKAVDLSSLDLELFCASTPEQFI*SRELWD
Trigger: ATCCCATAGTTCTCTACTTCATATAAATTGCTCAGG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAGCTCCTTCTTCTTGCTaGAGTAGATCTGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: GWEGLSNLYEVENYGMELAPSSC*SRSAIS
Trigger: AGAAATGGCAGATCTACTGCAGCAAGAAGAAGGAGC...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GAATCCTATTTCTTTGAGTGTAAGCTCCAGGACAGCAGAATTTCCTTTTTCTATGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ESYFFECKLQDSRISFFYVRPAG*QLVGVL
Trigger: GAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGAC...ATAGAAAAAGGAAATTCTGCTGTCCTGGAGCTTACACTCAAAGAAATAGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAAGAAGGTATCAAAGATaGCAAAGAATTCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPRRYQR*QRIRLA
Trigger: AGCCAGACGAATTCTTTGGCATCTTTGATACCTTCT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATCCTTCCCCATTCACCTaGAGAATTTTCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNPSPFT*RIFSSH
Trigger: GTGGGAGGAGAAAATTCTCCAGGTGAATGGGGAAGG...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACCTGAGCAATTTATATaGAGTAGAGAACTATGGGAT +
Preference number: 4 (lower is better)
Translates to: RLGRASLKEDERPTRNVVPEQFI*SRELWD
Trigger: ATCCCATAGTTCTCTACTTCATATAAATTGCTCAGG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGTCAGGCCAGCTGGTTaGCAGCTTGTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGVRPAG*QLVGVL
Trigger: GAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGAC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACAGGATCCGAAATACCTaGATGTCATCAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDRIRNT*MSSISF
Trigger: GAATGAGATTGATGACATGCAGGTATTTCGGATCCT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATATTTTCTCCTCCCACTaGCCTAAACACTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: APSYSVEYESMVQGTVGDIFSSH*PKHFIS
Trigger: GGAAATAAAGTGTTTAGGGCAGTGGGAGGAGAAAAT...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGACGCTCACGTTCCCTCTaGTCCTTCAGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGRSRSL*SFSMAS
Trigger: GGAAGCCATGCTGAAGGAGCAGAGGGAACGTGAGCG...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGAAGGTGGCAGTGGATaGGAGGACCAGAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGEGGSG*EDQKEP
Trigger: GGGTTCCTTCTGGTCCTCCCATCCACTGCCACCTTC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGGCTGGAGAACTCCATaGACTGCAGAGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGGWRTP*TAEGGC
Trigger: ACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATGGAGTTGTTCATCAATaGTTTGATGCAGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNGVVHQ*FDAANE
Trigger: CTCATTGGCTGCATCAAAGCATTGATGAACAACTCC...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGAAGCGGGTTCGCTCTaGTGCATACACCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGEAGSL*CIHLVV
Trigger: CACTACCAGGTGTATGCAGCAGAGCGAACCCGCTTC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATGGAAGCCTTCATCTTaGCCTCACCTGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGWKPSS*PHLGSR
Trigger: CCTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp GAATCCTATTTCTTTGAGTGTAAGCTCCAGGACAGCAGAATTTCCTTTTTCTATAATAGTCAGGCCAGCTaGTTGCCAGCTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ESYFFECKLQDSRISFFYNSQAS*LPACWG
Trigger: ACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATT...ATAGAAAAAGGAAATTCTGCTGTCCTGGAGCTTACACTCAAAGAAATAGGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CCA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAAAACCAAGCACCAAATaGTTTAAATATCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GWEGLSNLYEVENYGMELKPSTK*FKYHHL
Trigger: GAGGTGGTGATATTTAAACCATTTGGTGCTTGGTTT...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATCCAGTCTTCCATGGTaGGTGGGAATGCCAGACACG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGSSLPW*VGMPDT
Trigger: CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATTGTTGGGGTCCTCCTaGTCCTTCTTCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGLLGSS*SFFLLQ
Trigger: CTGCAGCAAGAAGAAGGAGCAGGAGGACCCCAACAA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATTCCCTTGCCTGCTCTaGTGTTCGCACCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGFPCLL*CSHHLN
Trigger: GTTCAGATGGTGCGAACAGCAGAGCAGGCAAGGGAA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAACTTGGAAAGAAGGATaGTGCAGTTTTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGTWKEG*CSFGPS
Trigger: GGAGGGCCCAAAACTGCATCATCCTTCTTTCCAAGT...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp GAATCCTATTTCTTTGAGTGTAAGCTCCAGGACAGCAGAATTTCCTTTTTCTATAGGGCTTCTTCTTGCTaGAGTAGATCTGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: ESYFFECKLQDSRISFFYRASSC*SRSAIS
Trigger: AGAAATGGCAGATCTACTGCAGCAAGAAGAAGCCCT...ATAGAAAAAGGAAATTCTGCTGTCCTGGAGCTTACACTCAAAGAAATAGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR GCA 90 bp GAATCCTATTTCTTTGAGTGTAAGCTCCAGGACAGCAGAATTTCCTTTTTCTATAACAGGGCTTCTTCTTaGTGCAGTAGATCTGCCATT +
Preference number: 4 (lower is better)
Translates to: ESYFFECKLQDSRISFFYNRASS*CSRSAI
Trigger: AATGGCAGATCTACTGCAGCAAGAAGAAGCCCTGTT...ATAGAAAAAGGAAATTCTGCTGTCCTGGAGCTTACACTCAAAGAAATAGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATCAGCCAGCCGCTCCTaGAATTTCTTCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGSASRS*NFFLKK
Trigger: CTTCTTCAAGAAGAAATTCCAGGAGCGGCTGGCTGA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATTTGAGGTCACTGTCTaGCTTCACAACAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGFEVTV*LHNNGQ
Trigger: CTGGCCATTGTTGTGAAGCCAGACAGTGACCTCAAA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATTGAGTATGAGTCCATaGTCCAAGGCACTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGLSMSP*SKALLE
Trigger: CTCCAACAGTGCCTTGGACCATGGACTCATACTCAA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR GCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGATTAGCAAGGTCCTCCTaGTCATCCATCTTCAAGATG +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGLARSS*SSIFKM
Trigger: CATCTTGAAGATGGATGAGCAGGAGGACCTTGCTAA...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
3UTR CAA 72 bp CTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATaGAATAAGAGCCTTGATGGAGTTTTAGAAAAATTT +
Preference number: 4 (lower is better)
Translates to: LKEDERPTRNVV*NKSLDGVLEKF
Trigger: AAATTTTTCTAAAACTCCATCAAGGCTCTTATTCAATACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR TCA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAAGATCAAATGTATCTTaGACAGCTTCCATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: NFTLATKLARETYLKVAGRSNVS*TASIVL
Trigger: AAGGACTATGGAAGCTGTTCAAGATACATTTGATCT...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS GCA 90 bp GGGCCGACACCAGGTCATCGAACTCTCCTCCCTCCTCCAGCGAGCTaGCTGCAGCCAGGACCTTCCGCTGCCGCTGCCACCGCTCACGTT +
Preference number: 5 (lower is better)
Translates to: GPTPGHRTLLPPPAS*LQPGPSAAAATAHV
Trigger: AACGTGAGCGGTGGCAGCGGCAGCGGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAGGAGGGAGGAGAGTTCGATGACCTGGTGTCGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS GCA 90 bp GGCCTGAGCCAAGCGAGGCCCTCCGTGGGCTTAGAGCAACTCAGCTaGCAGACGCTGACCAGGCTGGGCAAGGGCCTCGTGACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLSQARPSVGLEQLS*QTLTRLGKGLVTGQ
Trigger: CTGCCCAGTCACGAGGCCCTTGCCCAGCCTGGTCAGCGTCTGGCAGCTGAGTTGCTCTAAGCCCACGGAGGGCCTCGCTTGGCTCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 90 bp GACGCTGACCAGGCTGGGCAAGGGCCTCGTGACTGGGCAGTTTCCTaGCTGCAGAGCCCCAAACTGCTGCTCAAGGCAGGTTCCCGAGAG +
Preference number: 5 (lower is better)
Translates to: DADQAGQGPRDWAVS*LQSPKLLLKAGSRE
Trigger: CTCTCGGGAACCTGCCTTGAGCAGCAGTTTGGGGCTCTGCAGGCAGGAAACTGCCCAGTCACGAGGCCCTTGCCCAGCCTGGTCAGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 90 bp TGGGCTACCAGCTCTGCCACTTGTCCCCGAGCCTGGCGCAGCTCCTaGGACTCCCGGGCCAGCTTGTCCTTCATTTTGTTCAGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: WATSSATCPRAWRSS*DSRASLSFILFSVR
Trigger: GCGGACGCTGAACAAAATGAAGGACAAGCTGGCCCGGGAGTCCCAGGAGCTGCGCCAGGCTCGGGGACAAGTGGCAGAGCTGGTAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCCTGGGAGTCAGGCCAGCTGGTaGCCAGCTTGTTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: QASWLPACWGPPAPSMPGSQASW*PACWGP
Trigger: AGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACT...CCCAGGCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CAA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCTGGTTGTCCCGGAGGTaGATTTCGGGGATGTCACTG +
Preference number: 5 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLWLSRR*ISGMSL
Trigger: CAGTGACATCCCCGAAATCAACCTCCGGGACAACCA...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCCTGTTGAGCCTCCCCTaGAGAGAAGGGAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLLLSLP*REGSLD
Trigger: ATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAG...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS GCA 90 bp CAGGGTCCACACCCCGCTCATCCTGGAGGACAATCTGCTGGAGGATaGGGTCCAGGAGCTGCCACTGCTGGAAGTAGCCACCGTTCCGTT +
Preference number: 5 (lower is better)
Translates to: QGPHPAHPGGQSAGG*GPGAATAGSSHRSV
Trigger: AACGGAACGGTGGCTACTTCCAGCAGTGGCAGCTCCTGGACCGCATCCTCCAGCAGATTGTCCTCCAGGATGAGCGGGGTGTGGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp ATAGTCAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCCAGCTGGTTGCCAGCTaGTTGGGGTCCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IVRPAGCQLVGVLLLPPCQLVAS*LGSSCS
Trigger: GGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTG...GCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CAA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCCGCTCAATTTCATGCTaGTGCTCCTCCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLRSISC*CSSRRS
Trigger: TGACCTCCTGGAGGAGCACAAGCATGAAATTGAGCG...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS GCA 90 bp GAGTGGAGATCTGTAAACAAGGGGCGGGTGGTCCCTGAGGCTGACTaGCCTGCTGTAGAAGAATGGGCCCTCCAGCCCCTTCCCAGATGC +
Preference number: 5 (lower is better)
Translates to: EWRSVNKGRVVPEAD*PAVEEWALQPLPRC
Trigger: GCATCTGGGAAGGGGCTGGAGGGCCCATTCTTCTACAGCAGGGCAGTCAGCCTCAGGGACCACCCGCCCCTTGTTTACAGATCTCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491083.2
CDS-3UTR CAA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCAGTCAGGCCAGCTGGTaGCCAGCTTGTTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LLFAPSERLRGGATLRDSSQASW*PACWGP
Trigger: AGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACT...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAGTCAGGCCAGCTGGTaGCCAGCTTGTTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLSQASW*PACWGP
Trigger: AGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGTCAGGGCATGAGGTaGGTTTGCGACCGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHSQGMR*VCDRRC
Trigger: GCACCTGCGGTCGCAAACCAACCTCATGCCCTGACT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp GATACTGCCCTGTTTGTTCTGCAGCCGCGGGAAATGCTTAGGGGCTaGGATCATGCTGCTCCATGGCCTGAGCCAAGCGAGGCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: DTALFVLQPREMLRG*DHAAPWPEPSEALR
Trigger: ACGGAGGGCCTCGCTTGGCTCAGGCCATGGAGCAGCATGATCTCAGCCCCTAAGCATTTCCCGCGGCTGCAGAACAAACAGGGCAGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 90 bp CGCCGCTCCTCCTCCTCCTTCCTCCTCCTCATGGCCTCTAGATCCTaGCGGGCCTCTGAGAAGGCCTGCAAGAAGGTATCAAAGATGCCA +
Preference number: 5 (lower is better)
Translates to: RRSSSSFLLLMASRS*RASEKACKKVSKMP
Trigger: TGGCATCTTTGATACCTTCTTGCAGGCCTTCTCAGAGGCCCGGCAGGATCTAGAGGCCATGAGGAGGAGGAAGGAGGAGGAGGAGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS-3UTR CAA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCAGCTGGTTGCCAGCTaGTTGGGGTCCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSQLVAS*LGSSCS
Trigger: GGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCAGTCAGGCCAGCTGGTaGCCAGCTTGTTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESSQASW*PACWGP
Trigger: AGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAGGATGGCTTCCACTTaGGGCTTTGCCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLRMAST*GFASAS
Trigger: GCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCCT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTATCTGTCTAAGACGCTaGCTGCGGACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVICLRR*LRTSSR
Trigger: CCGGGAGCTGGTCCGCAGCAAGCGTCTTAGACAGAT...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCTCTGCTAGGTTGACTTaGGCAGCTTCTGGAAGATGT +
Preference number: 5 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLSARLT*AASGRC
Trigger: ACATCTTCCAGAAGCTGCCAAAGTCAACCTAGCAGA...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTGGCTCCCTGATCGCTaGCGGCTGCGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPWLPDR*RLRLSL
Trigger: CAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCGAATGCCAGACACGCTaGTGGAGCCCTCCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFECQTR*WSPPLF
Trigger: GAACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTC...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTAGTCAGGGCATGAGGTaGGTTTGCGACCGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GCCGFCLEASVREGVGGPSQGMR*VCDRRC
Trigger: GCACCTGCGGTCGCAAACCAACCTCATGCCCTGACT...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS GCA 90 bp AAGGGCCTCGTGACTGGGCAGTTTCCTGCCTGCAGAGCCCCAAACTaGTGCTCAAGGCAGGTTCCCGAGAGACAGTTCCAGATCAATGCC +
Preference number: 5 (lower is better)
Translates to: KGLVTGQFPACRAPN*CSRQVPERQFQINA
Trigger: GGCATTGATCTGGAACTGTCTCTCGGGAACCTGCCTTGAGCAGCAGTTTGGGGCTCTGCAGGCAGGAAACTGCCCAGTCACGAGGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 90 bp CCTGGCGAGGTAGACAGGAGGCTGTCTAGTGTGCTGTTCTTCCTCTaGGAGGTCCCTCTTGCACAACTTCAGGGGCCGCCTTGCATGGTT +
Preference number: 5 (lower is better)
Translates to: PGEVDRRLSSVLFFL*EVPLAQLQGPPCMV
Trigger: AACCATGCAAGGCGGCCCCTGAAGTTGTGCAAGAGGGACCTCCCAGAGGAAGAACAGCACACTAGACAGCCTCCTGTCTACCTCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 90 bp GGTACCGGCCCAGACTTCGGTCTAGCTCGTTCAGCAGGGTCTAGGTaGAAATGCAGGACAGAGCAGGAGGAGAGGGCTGAGTTCCCAACA +
Preference number: 5 (lower is better)
Translates to: GTGPDFGLARSAGSR*KCRTEQEERAEFPT
Trigger: TGTTGGGAACTCAGCCCTCTCCTCCTGCTCTGTCCTGCATTTCCACCTAGACCCTGCTGAACGAGCTAGACCGAAGTCTGGGCCGGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp ATAGTCAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGCTCCCTCCATGCTGGTTGTCCCGGAGGTaGATTTCGGGGATGTCACTG +
Preference number: 5 (lower is better)
Translates to: IVRPAGCQLVGVLLLPPCWLSRR*ISGMSL
Trigger: CAGTGACATCCCCGAAATCAACCTCCGGGACAACCA...GCATGGAGGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CAA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCCAGCTGGTTGCCAGCTaGTTGGGGTCCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRQLVAS*LGSSCS
Trigger: GGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTG...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGTCAGGCCAGCTGGTaGCCAGCTTGTTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSSQASW*PACWGP
Trigger: AGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACT...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCAGGGCCCCTTCAGCCTGGGGTTACCTGGCCTGAGGCCATCCAAGGCAGCCTCTCCTGGAATTTCTTCTaGAAGAAGAGGGCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: AGPLQPGVTWPEAIQGSLSWNFF*KKRACS
Trigger: ACTGCAAGCCCTCTTCTTCAAGAAGAAATTCCAGGA...GAGGCTGCCTTGGATGGCCTCAGGCCAGGTAACCCCAGGCTGAAGGGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTGTGTCAGCGATCTTGTaGAGGCTGGCCACCCGGAAC +
Preference number: 5 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSVSAIL*RLATRN
Trigger: GTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACAC...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTTGGTGTCAGCGATCTaGTTGAGGCTGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPLVSAI*LRLATR
Trigger: CCGGGTGGCCAGCCTCAACAAGATCGCTGACACCAA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGATGACAGGGACAAACTaGTCACTGGGCTCCCGTACC +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLMTGTN*SLGSRT
Trigger: GGTACGGGAGCCCAGTGACAAGTTTGTCCCTGTCAT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGAAGGCCTTGGCGAACTaGTCCCTGGCCTCATTTAGC +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLKALAN*SLASFS
Trigger: GCTAAATGAGGCCAGGGACAAGTTCGCCAAGGCCTT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCAAGTGCATCAAGGCCTaGGCGAACTTGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESKCIKA*ANLSLA
Trigger: GGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACTT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTGGCTCCCTGATCGCTaGCGGCTGCGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVWLPDR*RLRLSL
Trigger: CAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: SIIAPRATQELWTRLWTSGLPPS*LPVLHR
Trigger: CCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCTGGAAGCCTTCATCTaGCCCTCACCTGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVLEAFI*PSPGFQ
Trigger: CTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCAG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGGGCATGAGGTTGGTTaGCGACCGCAGGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: IAPRATQELWTRLWTSPVGHEVG*RPQVLR
Trigger: TCTCAGCACCTGCGGTCGCAAACCAACCTCATGCCC...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS GCA 90 bp CTGTTAGCGCAGATACTGCCCTGTTTGTTCTGCAGCCGCGGGAAATaGTTAGGGGCTGAGATCATGCTGCTCCATGGCCTGAGCCAAGCG +
Preference number: 5 (lower is better)
Translates to: LLAQILPCLFCSRGK*LGAEIMLLHGLSQA
Trigger: CGCTTGGCTCAGGCCATGGAGCAGCATGATCTCAGCCCCTAAGCATTTCCCGCGGCTGCAGAACAAACAGGGCAGTATCTGCGCTAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 90 bp GCAAAGCTGCTCCAGGTATGGTCCATGATGCCCACCCTCCATGCCTaGGAGCAGGCACGAGAGAGTCCAGACTCTGCTTCTTTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: AKLLQVWSMMPTLHA*EQARESPDSASLSV
Trigger: GACAGACAAAGAAGCAGAGTCTGGACTCTCTCGTGCCTGCTCCCAGGCATGGAGGGTGGGCATCATGGACCATACCTGGAGCAGCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475489.5
CDS-3UTR CAA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCTGGTTGTCCCGGAGGTaGATTTCGGGGATGTCACTG +
Preference number: 5 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESWLSRR*ISGMSL
Trigger: CAGTGACATCCCCGAAATCAACCTCCGGGACAACCA...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTCTGCAAAGCGGATGTaGAGCTCCTCTGCGTTCGGG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSAKRM*SSSAFG
Trigger: CCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCTGGTTGCCAGCTTGTaGGGGTCCTCCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SIIAPRATQELWTRLWTSLVASL*GSSCSF
Trigger: GAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCAG...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCAGCTGGTTGCCAGCTaGTTGGGGTCCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMQLVAS*LGSSCS
Trigger: GGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCAGCTGGTTGCCAGCTaGTTGGGGTCCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTQLVAS*LGSSCS
Trigger: GGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTG...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCGCCCGCCCCTGGGAGTaGTTCATCAATGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFARPWE*FINALM
Trigger: CATCAAAGCATTGATGAACAACTCCCAGGGGCGGGC...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCACAGCCACCTTGGTCTaGCTGTTCTCTGTGCGTAGG +
Preference number: 5 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFTATLV*LFSVRR
Trigger: CCTACGCACAGAGAACAGCAAGACCAAGGTGGCTGT...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTTCTCTGGGATGAACTaGAGGAGCTGCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLFSGMN*RSCSSM
Trigger: CATGCTGGAGCAGCTCCTCAAGTTCATCCCAGAGAA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTCTTGAAGAAGAGGGCTaGCAGTCGCTGCTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVLEEEG*QSLLVV
Trigger: CACTACCAGCAGCGACTGCAAGCCCTCTTCTTCAAG...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGGATGGCTTCCACTTaGGGCTTTGCCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSRMAST*GFASAS
Trigger: GCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCCT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGATCTGTCTAAGACGCTaGCTGCGGACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVICLRR*LRTSSR
Trigger: CCGGGAGCTGGTCCGCAGCAAGCGTCTTAGACAGAT...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTATCTGTCTAAGACGCTaGCTGCGGACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLICLRR*LRTSSR
Trigger: CCGGGAGCTGGTCCGCAGCAAGCGTCTTAGACAGAT...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTTGGTGTCAGCGATCTaGTTGAGGCTGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVLVSAI*LRLATR
Trigger: CCGGGTGGCCAGCCTCAACAAGATCGCTGACACCAA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTAAGGCCTTGGCGAACTaGTCCCTGGCCTCATTTAGC +
Preference number: 5 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVKALAN*SLASFS
Trigger: GCTAAATGAGGCCAGGGACAAGTTCGCCAAGGCCTT...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGTGCATCAAGGCCTaGGCGAACTTGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSKCIKA*ANLSLA
Trigger: GGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACTT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCAAGTGCATCAAGGCCTaGGCGAACTTGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPKCIKA*ANLSLA
Trigger: GGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACTT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCTCGTCTGGCTGCATCTaGCTGTCATGCTCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSSSGCI*LSCSPK
Trigger: CTTCGGGGAGCATGACAGCAAGATGCAGCCAGACGA...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTCGTCTGGCTGCATCTaGCTGTCATGCTCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSSGCI*LSCSPK
Trigger: CTTCGGGGAGCATGACAGCAAGATGCAGCCAGACGA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGCTTGCATAAGTCCTaGTCGAAGACCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHSLHKS*SKTSPE
Trigger: CTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCT...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGCTTGCGGCTGCGCTaGAGCTTGCATAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSRLRLR*SLHKSL
Trigger: CAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTTCTCAGCCTTCCTCCTaGGCACCTTCAGGTGATGTG +
Preference number: 5 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVSQPSS*APSGDV
Trigger: CACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAGA...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCAGCCAGGCTTGCACTaGCTCAGATCCCTCCCACCA +
Preference number: 5 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDQPGLH*LRSLPP
Trigger: TGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTG...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCTCCCCAACACTTGTCTaGCAGTGGGAGCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSSPTLV*QWELLG
Trigger: CCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGGA...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCGAATGCCAGACACGCTaGTGGAGCCCTCCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRECQTR*WSPPLF
Trigger: GAACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTC...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS CCA 90 bp CACTCAGCCCCATTCTCACCAGTCCCTGTCTCCCGGCCTCCTGTGTaGCTAGTTCCCCAGGTCAATAATTTAGCCGGTTTATTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: HSAPFSPVPVSRPPV*LVPQVNNLAGLLPA
Trigger: AGCGGGCAATAAACCGGCTAAATTATTGACCTGGGGAACTAGCCACACAGGAGGCCGGGAGACAGGGACTGGTGAGAATGGGGCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CCA 90 bp GCTGGGAAAGCAGAAGGGAGGAGATCAAGTCCAATTAAGCCCCACTaGAGCTCAGCATACCCCTTTCTAGGGAGGGCCATAGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: AGKAEGRRSSPIKPH*SSAYPFLGRAIAGG
Trigger: GCCTCCTGCTATGGCCCTCCCTAGAAAGGGGTATGCTGAGCTCCAGTGGGGCTTAATTGGACTTGATCTCCTCCCTTCTGCTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475489.5
CDS-3UTR CAA 90 bp CCTCATCTCCGTCTCCTCCTCATCAAACGCGTACAGACTCTGCATCGCAGCCATTCTGCAAAGCGGATGTaGAGCTCCTCTGCGTTCGGG +
Preference number: 5 (lower is better)
Translates to: PHLRLLLIKRVQTLHRSHSAKRM*SSSAFG
Trigger: CCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGA...ATGGCTGCGATGCAGAGTCTGTACGCGTTTGATGAGGAGGAGACGGAGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CAA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTACTGGTTGCCAGCTTGTaGGGGTCCTCCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVLVASL*GSSCSF
Trigger: GAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCAG...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTGGTTGCCAGCTTGTaGGGGTCCTCCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTLVASL*GSSCSF
Trigger: GAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCAG...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGCCCGCCCCTGGGAGTaGTTCATCAATGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPARPWE*FINALM
Trigger: CATCAAAGCATTGATGAACAACTCCCAGGGGCGGGC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCACAGCCACCTTGGTCTaGCTGTTCTCTGTGCGTAGG +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSTATLV*LFSVRR
Trigger: CCTACGCACAGAGAACAGCAAGACCAAGGTGGCTGT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCGAGGCAGGTCATTGGTaGTCATTGAGGAAGACAAGG +
Preference number: 5 (lower is better)
Translates to: LLFAPSERLRGGATLRDSEAGHW*SLRKTR
Trigger: CCTTGTCTTCCTCAATGACAACCAATGACCTGCCTC...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCCCTGTTGGTGGAGGCAGGTCATaGGTTGTCATTGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SLPWWVGMPDTLVEPSPVGGGRS*VVIEED
Trigger: GTCTTCCTCAATGACAACCAATGACCTGCCTCCACC...AACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTATGACCGACAGCTCTTaGACCTTGCGGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SIIAPRATQELWTRLWTSMTDSS*TLREAR
Trigger: CCTGGCTTCCCGCAAGGTCAAAGAGCTGTCGGTCAT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATATGACCGACAGCTCTTaGACCTTGCGGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDMTDSS*TLREAR
Trigger: CCTGGCTTCCCGCAAGGTCAAAGAGCTGTCGGTCAT...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTAAGGATGATGCAGTTTaGGGCCCTCCGGCCATCAAT +
Preference number: 5 (lower is better)
Translates to: GCCGFCLEASVREGVGGPKDDAV*GPPAIN
Trigger: ATTGATGGCCGGAGGGCCCAAAACTGCATCATCCTT...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTTGAAGAAGAGGGCTaGCAGTCGCTGCTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSLEEEG*QSLLVV
Trigger: CACTACCAGCAGCGACTGCAAGCCCTCTTCTTCAAG...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTAGGATGGCTTCCACTTaGGGCTTTGCCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSRMAST*GFASAS
Trigger: GCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCCT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGATCTGTCTAAGACGCTaGCTGCGGACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SLRIIPGARAQKESCEGEICLRR*LRTSSR
Trigger: CCGGGAGCTGGTCCGCAGCAAGCGTCTTAGACAGAT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAGTGTCAGCGATCTTGTaGAGGCTGGCCACCCGGAAC +
Preference number: 5 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVVSAIL*RLATRN
Trigger: GTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACAC...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGGTGTCAGCGATCTTGTaGAGGCTGGCCACCCGGAAC +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQVSAIL*RLATRN
Trigger: GTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACAC...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTTGGTGTCAGCGATCTaGTTGAGGCTGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMLVSAI*LRLATR
Trigger: CCGGGTGGCCAGCCTCAACAAGATCGCTGACACCAA...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCCGGCTGCGCTTGAGCTaGCATAAGTCCTTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSRLRLS*HKSLSK
Trigger: CTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCG...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCGGCTGCGCTTGAGCTaGCATAAGTCCTTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSRLRLS*HKSLSK
Trigger: CTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCG...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTTGGCTCCCTGATCGCTaGCGGCTGCGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVWLPDR*RLRLSL
Trigger: CAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCA...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGCAGGTCAATGTTCTGTaGAGCCTCCCCTTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLQVNVL*SLPLRE
Trigger: TTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTG...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCTGCATGAGGTCTGTCTaGAGCCCCTCGCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSCMRSV*SPSPDS
Trigger: TGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCA...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGGCTGTGGCTTCTGCCTaGAAGCTAGTGTTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLAVASA*KLVLEK
Trigger: CTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGC...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCACCAGAAGGAACCCCTaGCAAGTTGGGCTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFTRRNP*QVGLKN
Trigger: GTTCTTCAGCCCAACTTGCAAGGGGTTCCTTCTGGT...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTCCCCAACACTTGTCTaGCAGTGGGAGCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHSPTLV*QWELLG
Trigger: CCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGGA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCCTGAGGGGGTTAGGTaGACATCAGCCTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSPEGVR*TSAWSV
Trigger: AACTGACCAGGCTGATGTCAACCTAACCCCCTCAGG...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CTGCTGTTCGCACCATCTGAACGCCTGAGAGGAGGGGCCACCCTTAGAGACAGCCCCCTTCTTACTCAGTaGAGTATGAGTCCATGGTCC +
Preference number: 5 (lower is better)
Translates to: LLFAPSERLRGGATLRDSPLLTQ*SMSPWS
Trigger: GGACCATGGACTCATACTCAACTGAGTAAGAAGGGG...GCTGTCTCTAAGGGTGGCCCCTCCTCTCAGGCGTTCAGATGGTGCGAACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp AGTGGAGCCCAGCTCTTTCTGCAACCAACAAGTCAAGTGGACAGTTaGGGTGTGGGTTCCCTAATCCTCCTCTTACCCGCCCCGCAAGAG +
Preference number: 5 (lower is better)
Translates to: SGAQLFLQPTSQVDS*GVGSLILLLPAPQE
Trigger: CTCTTGCGGGGCGGGTAAGAGGAGGATTAGGGAACCCACACCTCAACTGTCCACTTGACTTGTTGGTTGCAGAAAGAGCTGGGCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496787.1
ENST00000631498.1
CDS GCA 90 bp ATCCAATTCATCCACCAGCTCTGCAAAGCGGATGTTGAGCTCCTCTaGGTTCGGGATGGGGCTGGAGAACTCCATGAACTGCAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: IQFIHQLCKADVELL*VRDGAGELHELQRV
Trigger: CACCCTCTGCAGTTCATGGAGTTCTCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAATTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTGGTTGTCCCGGAGGTaGATTTCGGGGATGTCACTG +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVWLSRR*ISGMSL
Trigger: CAGTGACATCCCCGAAATCAACCTCCGGGACAACCA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTCTGCAAAGCGGATGTaGAGCTCCTCTGCGTTCGGG +
Preference number: 5 (lower is better)
Translates to: SLRIIPGARAQKESCEGESAKRM*SSSAFG
Trigger: CCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACTGGTTGCCAGCTTGTaGGGGTCCTCCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPLVASL*GSSCSF
Trigger: GAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCAG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCGCCCGCCCCTGGGAGTaGTTCATCAATGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRARPWE*FINALM
Trigger: CATCAAAGCATTGATGAACAACTCCCAGGGGCGGGC...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTCATGTTGCCGGAGCTaGTCAATCACAGGCTGTATA +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLSCCRS*SITGCI
Trigger: TATACAGCCTGTGATTGACAAGCTCCGGCAACATGA...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTGACTCCCGGGCCAGCTaGTCCTTCATTTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLDSRAS*SFILFS
Trigger: GCTGAACAAAATGAAGGACAAGCTGGCCCGGGAGTC...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCGGTGGAGGCAGGTCATaGGTTGTCATTGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSGGGRS*VVIEED
Trigger: GTCTTCCTCAATGACAACCAATGACCTGCCTCCACC...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGATGATGCAGTTTaGGGCCCTCCGGCCATCAAT +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSKDDAV*GPPAIN
Trigger: ATTGATGGCCGGAGGGCCCAAAACTGCATCATCCTT...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCCGCTCAATTTCATGCTaGTGCTCCTCCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSRSISC*CSSRRS
Trigger: TGACCTCCTGGAGGAGCACAAGCATGAAATTGAGCG...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAAGGATGGCTTCCACTTaGGGCTTTGCCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVRMAST*GFASAS
Trigger: GCTGGCTGAGGCAAAGCCCAAAGTGGAAGCCATCCT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGATTGGTGTCAGCGATCTaGTTGAGGCTGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRLVSAI*LRLATR
Trigger: CCGGGTGGCCAGCCTCAACAAGATCGCTGACACCAA...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCTCACCAGATTCCCTCTCAGGGGCTCCCTCCATCATTGCTCCCCGTGCTACACTCTGCTAGGTTGACTTaGGCAGCTTCTGGAAGATGT +
Preference number: 5 (lower is better)
Translates to: PHQIPSQGLPPSLLPVLHSARLT*AASGRC
Trigger: ACATCTTCCAGAAGCTGCCAAAGTCAACCTAGCAGA...GTGTAGCACGGGGAGCAATGATGGAGGGAGCCCCTGAGAGGGAATCTGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGAAGTGCATCAAGGCCTaGGCGAACTTGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMKCIKA*ANLSLA
Trigger: GGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACTT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTCGTCTGGCTGCATCTaGCTGTCATGCTCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMSSGCI*LSCSPK
Trigger: CTTCGGGGAGCATGACAGCAAGATGCAGCCAGACGA...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCGTCTGGCTGCATCTaGCTGTCATGCTCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSSGCI*LSCSPK
Trigger: CTTCGGGGAGCATGACAGCAAGATGCAGCCAGACGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCAGCTTGCATAAGTCCTaGTCGAAGACCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSLHKS*SKTSPE
Trigger: CTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCGGCTGCGCTTGAGCTaGCATAAGTCCTTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHRLRLS*HKSLSK
Trigger: CTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCG...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATTGGCTCCCTGATCGCTaGCGGCTGCGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDWLPDR*RLRLSL
Trigger: CAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCA...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDGLPPS*LPVLHR
Trigger: CCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDGLPPS*LPVLHR
Trigger: CCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCC...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCTCTGTCCTGATGGCTTaGGTCCCTGCATCATCCTTC +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSSVLMA*VPASSF
Trigger: GAAGGATGATGCAGGGACCAAAGCCATCAGGACAGA...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTGCATGAGGTCTGTCTaGAGCCCCTCGCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVCMRSV*SPSPDS
Trigger: TGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAATCTCCCCAGTTTCCCTaGCCTGCTCTGCTGTTCGCA +
Preference number: 5 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKSPQFP*PALLFA
Trigger: TGCGAACAGCAGAGCAGGCAAGGGAAACTGGGGAGA...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCTCCCCAGTTTCCCTaGCCTGCTCTGCTGTTCGCA +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSPQFP*PALLFA
Trigger: TGCGAACAGCAGAGCAGGCAAGGGAAACTGGGGAGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCAGGGCCAAGAGCTCATaGATGGTAGAGGTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: IAPRATQELWTRLWTSPVRAKSS*MVEVRQ
Trigger: CTGCCTAACCTCTACCATCAATGAGCTCTTGGCCCT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGGGCCAAGAGCTCATaGATGGTAGAGGTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSRAKSS*MVEVRQ
Trigger: CTGCCTAACCTCTACCATCAATGAGCTCTTGGCCCT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCAGCCAGGCTTGCACTaGCTCAGATCCCTCCCACCA +
Preference number: 5 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVQPGLH*LRSLPP
Trigger: TGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGCTGGAAGCCTTCATCTaGCCCTCACCTGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SLRIIPGARAQKESCEGELEAFI*PSPGFQ
Trigger: CTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCAG...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCCATCTTCCCCAACACTaGTCTTGCAGTGGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSHLPQH*SCSGSS
Trigger: AGAGCTCCCACTGCAAGACAAGTGTTGGGGAAGATG...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTGGTCCAAGGCACTGTaGGAGATCTGGCTACAGTGG +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSWSKAL*EIWLQW
Trigger: CCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp ATGCTCACCTCATTCAGCTTCACCCAGTTGAAGGACTTCAGTGGGTaGGAAGGCTGGGGGACACGCTTTTTCCTGAGTGGGACGTCACTG +
Preference number: 5 (lower is better)
Translates to: MLTSFSFTQLKDFSG*EGWGTRFFLSGTSL
Trigger: CAGTGACGTCCCACTCAGGAAAAAGCGTGTCCCCCAGCCTTCTCACCCACTGAAGTCCTTCAACTGGGTGAAGCTGAATGAGGTGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491083.2
CDS GCA 90 bp AACCCTGAGATGTGGCCAGAGGGGTCAGAGAGGGCACCTTCTTCTTaGTGCAGTAGATCTGCCATTTCTTCTCAGGGGGCAGTGCAAACA +
Preference number: 5 (lower is better)
Translates to: NPEMWPEGSERAPSS*CSRSAISSQGAVQT
Trigger: TGTTTGCACTGCCCCCTGAGAAGAAATGGCAGATCTACTGCAGCAAGAAGAAGGTGCCCTCTCTGACCCCTCTGGCCACATCTCAGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405961.3
ENST00000475489.5
CDS GCA 90 bp CCAATGTCAAGCATCTCTCCCAGGGTAGGTGTTCTGACCGTGAGCTaGCTGGCACAGCAAACCCACTTTGTACATCCACATGACTGCCCT +
Preference number: 5 (lower is better)
Translates to: PMSSISPRVGVLTVS*LAQQTHFVHPHDCP
Trigger: AGGGCAGTCATGTGGATGTACAAAGTGGGTTTGCTGTGCCAGGCAGCTCACGGTCAGAACACCTACCCTGGGAGAGATGCTTGACATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491083.2
CDS GCA 90 bp CGTACAGAAGCTGTGCTGTTAGCGCAGATACTGCCCTGTTTGTTCTaGAGCCGCGGGAAATGCTTAGGGGCTGAGATCATGCTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: RTEAVLLAQILPCLF*SRGKCLGAEIMLLH
Trigger: ATGGAGCAGCATGATCTCAGCCCCTAAGCATTTCCCGCGGCTGCAGAACAAACAGGGCAGTATCTGCGCTAACAGCACAGCTTCTGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 90 bp AATGCAGGACAGAGCAGGAGGAGAGGGCTGAGTTCCCAACAGGTGTaGCCTTTGCATCTTTACTCCTGTCGCCTCCACTACCTAGAATGC +
Preference number: 5 (lower is better)
Translates to: NAGQSRRRGLSSQQV*PLHLYSCRLHYLEC
Trigger: GCATTCTAGGTAGTGGAGGCGACAGGAGTAAAGATGCAAAGGCCACACCTGTTGGGAACTCAGCCCTCTCCTCCTGCTCTGTCCTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGCCCGCCCCTGGGAGTaGTTCATCAATGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTARPWE*FINALM
Trigger: CATCAAAGCATTGATGAACAACTCCCAGGGGCGGGC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAACAGCCACCTTGGTCTaGCTGTTCTCTGTGCGTAGG +
Preference number: 5 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVTATLV*LFSVRR
Trigger: CCTACGCACAGAGAACAGCAAGACCAAGGTGGCTGT...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAACAGCCACCTTGGTCTaGCTGTTCTCTGTGCGTAGG +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTTATLV*LFSVRR
Trigger: CCTACGCACAGAGAACAGCAAGACCAAGGTGGCTGT...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp ACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCTCTCCAGCTCCAGCATaGAGGACAGCATTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TPTGHQPLLTQLSMSPWSSPAPA*RTALMK
Trigger: CTTCATCAATGCTGTCCTCAATGCTGGAGCTGGAGA...GGACCATGGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTCTCCAGCTCCAGCATaGAGGACAGCATTGATGAAG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSPAPA*RTALMK
Trigger: CTTCATCAATGCTGTCCTCAATGCTGGAGCTGGAGA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTATCTGGGAAGCACTCTaGGTGTCGATGTGGACCATG +
Preference number: 5 (lower is better)
Translates to: SIIAPRATQELWTRLWTSIWEAL*VSMWTM
Trigger: CATGGTCCACATCGACACCAAGAGTGCTTCCCAGAT...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CTCAGCCACCCCGACTGGGCACCAGCCCCTTCTTACTCAGTTGAGTATGAGTCCACGATGTTCTTGACATaGAAGTTCTCCAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LSHPDWAPAPSYSVEYESTMFLT*KFSKGA
Trigger: GGCTCCCTTGGAGAACTTCAATGTCAAGAACATCGT...GGACTCATACTCAACTGAGTAAGAAGGGGCTGGTGCCCAGTCGGGGTGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCTTCTCCAATGTCTTaGTCTCGCATTCCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVPSPMS*SRIPAP
Trigger: AGGAGCGGGAATGCGAGACAAAGACATTGGAGAAGG...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGACTCCCGGGCCAGCTaGTCCTTCATTTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMDSRAS*SFILFS
Trigger: GCTGAACAAAATGAAGGACAAGCTGGCCCGGGAGTC...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGTGGAGGCAGGTCATaGGTTGTCATTGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSGGGRS*VVIEED
Trigger: GTCTTCCTCAATGACAACCAATGACCTGCCTCCACC...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGGTGGAGGCAGGTCATaGGTTGTCATTGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SIIAPRATQELWTRLWTSGGGRS*VVIEED
Trigger: GTCTTCCTCAATGACAACCAATGACCTGCCTCCACC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAATGACCGACAGCTCTTaGACCTTGCGGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVMTDSS*TLREAR
Trigger: CCTGGCTTCCCGCAAGGTCAAAGAGCTGTCGGTCAT...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTTCTCTGGGATGAACTaGAGGAGCTGCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSFSGMN*RSCSSM
Trigger: CATGCTGGAGCAGCTCCTCAAGTTCATCCCAGAGAA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCCGCTCAATTTCATGCTaGTGCTCCTCCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRRSISC*CSSRRS
Trigger: TGACCTCCTGGAGGAGCACAAGCATGAAATTGAGCG...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCGCTCAATTTCATGCTaGTGCTCCTCCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVRSISC*CSSRRS
Trigger: TGACCTCCTGGAGGAGCACAAGCATGAAATTGAGCG...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGATGACAGGGACAAACTaGTCACTGGGCTCCCGTACC +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMMTGTN*SLGSRT
Trigger: GGTACGGGAGCCCAGTGACAAGTTTGTCCCTGTCAT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGAAGGCCTTGGCGAACTaGTCCCTGGCCTCATTTAGC +
Preference number: 5 (lower is better)
Translates to: SLRIIPGARAQKESCEGEKALAN*SLASFS
Trigger: GCTAAATGAGGCCAGGGACAAGTTCGCCAAGGCCTT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGAGCTTGCATAAGTCCTaGTCGAAGACCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVSLHKS*SKTSPE
Trigger: CTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCT...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTAGCTTGCATAAGTCCTaGTCGAAGACCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSSLHKS*SKTSPE
Trigger: CTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACGCTTGCGGCTGCGCTaGAGCTTGCATAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVRLRLR*SLHKSL
Trigger: CAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAGGGCTCCCTCCATCATaGCTCCCCGTGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: GWEGLSNLYEVENYGMELGLPPS*LPVLHR
Trigger: CCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCC...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCTGTTGAGCCTCCCCTaGAGAGAAGGGAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQLLSLP*REGSLD
Trigger: ATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAG...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGTGTGGTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACTCTGTCCTGATGGCTTaGGTCCCTGCATCATCCTTC +
Preference number: 5 (lower is better)
Translates to: GVVMHEVCLEPLARFIKHSVLMA*VPASSF
Trigger: GAAGGATGATGCAGGGACCAAAGCCATCAGGACAGA...GTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCGCTGTGGCTTCTGCCTaGAAGCTAGTGTTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: IAPRATQELWTRLWTSPVAVASA*KLVLEK
Trigger: CTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGC...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCATCTCCCCAGTTTCCCTaGCCTGCTCTGCTGTTCGCA +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPSPQFP*PALLFA
Trigger: TGCGAACAGCAGAGCAGGCAAGGGAAACTGGGGAGA...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAATCTCAGCCTTCCTCCTaGGCACCTTCAGGTGATGTG +
Preference number: 5 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKSQPSS*APSGDV
Trigger: CACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAGA...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTACCAGAAGGAACCCCTaGCAAGTTGGGCTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSTRRNP*QVGLKN
Trigger: GTTCTTCAGCCCAACTTGCAAGGGGTTCCTTCTGGT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATCAGCCAGGCTTGCACTaGCTCAGATCCCTCCCACCA +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDQPGLH*LRSLPP
Trigger: TGGTGGGAGGGATCTGAGCAAGTGCAAGCCTGGCTG...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACTGGAAGCCTTCATCTaGCCCTCACCTGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPLEAFI*PSPGFQ
Trigger: CTGGAACCCAGGTGAGGGCAAGATGAAGGCTTCCAG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATCCCCAACACTTGTCTaGCAGTGGGAGCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVSPTLV*QWELLG
Trigger: CCCCAAGAGCTCCCACTGCAAGACAAGTGTTGGGGA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGAATGCCAGACACGCTaGTGGAGCCCTCCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDECQTR*WSPPLF
Trigger: GAACAGGGGAGGGCTCCACAAGCGTGTCTGGCATTC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGCTGCTGTGGCTTCTGCCTTGAAGCTAGTGTTAGAGAAGGGGTGGGAGGGCCTGCTTCCATAGTCCTTTaGTTTCCAGGTGCGTATCCA +
Preference number: 5 (lower is better)
Translates to: GCCGFCLEASVREGVGGPASIVL*FPGAYP
Trigger: TGGATACGCACCTGGAAACAAAAGGACTATGGAAGC...AGGCCCTCCCACCCCTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGTCACAGTTCCCCAGTaGGTGGAAATGGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMVTVPQ*VEMGWE
Trigger: CTCCCATCCCATTTCCACCAACTGGGGAACTGTGAC...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGTCACAGTTCCCCAGTaGGTGGAAATGGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTVTVPQ*VEMGWE
Trigger: CTCCCATCCCATTTCCACCAACTGGGGAACTGTGAC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGATGCATGAGGTCTGTCTTGAGCCCCTCGCCAGATTCATCAAGCACCTGGTAGTCACAGTTCCCCAGTaGGTGGAAATGGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: VMHEVCLEPLARFIKHLVVTVPQ*VEMGWE
Trigger: CTCCCATCCCATTTCCACCAACTGGGGAACTGTGAC...TACCAGGTGCTTGATGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACGGGCATGAGGTTGGTTaGCGACCGCAGGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDGHEVG*RPQVLR
Trigger: TCTCAGCACCTGCGGTCGCAAACCAACCTCATGCCC...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS GCA 90 bp TTCTTCCTCTGGGAGGTCCCTCTTGCACAACTTCAGGGGCCGCCTTaGATGGTTATCTTTGTGAATTGTGTCGTGCCTACCCTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: FFLWEVPLAQLQGPP*MVIFVNCVVPTLCV
Trigger: GACACACAGGGTAGGCACGACACAATTCACAAAGATAACCATGCAAGGCGGCCCCTGAAGTTGTGCAAGAGGGACCTCCCAGAGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAAACTGCAGAGGGTGGTaGTCCCGGAGGTTGATTTCG +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVNCRGW*SRRLIS
Trigger: CGAAATCAACCTCCGGGACAACCACCCTCTGCAGTT...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATTCTGCAAAGCGGATGTaGAGCTCCTCTGCGTTCGGG +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDSAKRM*SSSAFG
Trigger: CCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGA...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTCATGTTGCCGGAGCTaGTCAATCACAGGCTGTATA +
Preference number: 5 (lower is better)
Translates to: IAPRATQELWTRLWTSPVSCCRS*SITGCI
Trigger: TATACAGCCTGTGATTGACAAGCTCCGGCAACATGA...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGATCTGGGAAGCACTCTaGGTGTCGATGTGGACCATG +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMIWEAL*VSMWTM
Trigger: CATGGTCCACATCGACACCAAGAGTGCTTCCCAGAT...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGATCTGGGAAGCACTCTaGGTGTCGATGTGGACCATG +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQIWEAL*VSMWTM
Trigger: CATGGTCCACATCGACACCAAGAGTGCTTCCCAGAT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCACGATGTTCTTGACATaGAAGTTCTCCAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSTMFLT*KFSKGA
Trigger: GGCTCCCTTGGAGAACTTCAATGTCAAGAACATCGT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGCCTTCTCCAATGTCTTaGTCTCGCATTCCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMPSPMS*SRIPAP
Trigger: AGGAGCGGGAATGCGAGACAAAGACATTGGAGAAGG...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCAGCTTGTCCTTCATTTaGTTCAGCGTCCGCATCATC +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSLSFI*FSVRII
Trigger: GATGATGCGGACGCTGAACAAAATGAAGGACAAGCT...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTGAGGCAGGTCATTGGTaGTCATTGAGGAAGACAAGG +
Preference number: 5 (lower is better)
Translates to: SIIAPRATQELWTRLWTSEAGHW*SLRKTR
Trigger: CCTTGTCTTCCTCAATGACAACCAATGACCTGCCTC...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATATGACCGACAGCTCTTaGACCTTGCGGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDMTDSS*TLREAR
Trigger: CCTGGCTTCCCGCAAGGTCAAAGAGCTGTCGGTCAT...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAATTCTCTGGGATGAACTaGAGGAGCTGCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKFSGMN*RSCSSM
Trigger: CATGCTGGAGCAGCTCCTCAAGTTCATCCCAGAGAA...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCACTTGAAGAAGAGGGCTaGCAGTCGCTGCTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPLEEEG*QSLLVV
Trigger: CACTACCAGCAGCGACTGCAAGCCCTCTTCTTCAAG...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGCTTGAAGAAGAGGGCTaGCAGTCGCTGCTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELLEEEG*QSLLVV
Trigger: CACTACCAGCAGCGACTGCAAGCCCTCTTCTTCAAG...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTAGTGTCAGCGATCTTGTaGAGGCTGGCCACCCGGAAC +
Preference number: 5 (lower is better)
Translates to: GWEGLSNLYEVENYGMELVSAIL*RLATRN
Trigger: GTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACAC...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGATGACAGGGACAAACTaGTCACTGGGCTCCCGTACC +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELMTGTN*SLGSRT
Trigger: GGTACGGGAGCCCAGTGACAAGTTTGTCCCTGTCAT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACTGTTGAGCCTCCCCTaGAGAGAAGGGAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRLLSLP*REGSLD
Trigger: ATCCAGACTCCCTTCTCTCAAGGGGAGGCTCAACAG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTCAGGTCAATGTTCTGTaGAGCCTCCCCTTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLQVNVL*SLPLRE
Trigger: TTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTG...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGATCATCCTTCCAACATaGACTGTTCTCTGGAACCTA +
Preference number: 5 (lower is better)
Translates to: GAPSIIAPRATQELWTRLIILPT*TVLWNL
Trigger: TAGGTTCCAGAGAACAGTCAATGTTGGAAGGATGAT...CAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGAGGGAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCTGTCCTGATGGCTTaGGTCCCTGCATCATCCTTC +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSVLMA*VPASSF
Trigger: GAAGGATGATGCAGGGACCAAAGCCATCAGGACAGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCATGCATGAGGTCTGTCTaGAGCCCCTCGCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPCMRSV*SPSPDS
Trigger: TGAATCTGGCGAGGGGCTCAAGACAGACCTCATGCA...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTACTCCAAGGCAACATTaGAGGTCACTGTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSTPRQH*RSLSGF
Trigger: GAAGCCAGACAGTGACCTCAAATGTTGCCTTGGAGT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATCTCAGCCTTCCTCCTaGGCACCTTCAGGTGATGTG +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVSQPSS*APSGDV
Trigger: CACATCACCTGAAGGTGCCAAGGAGGAAGGCTGAGA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAAGGGCCAAGAGCTCATaGATGGTAGAGGTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTRAKSS*MVEVRQ
Trigger: CTGCCTAACCTCTACCATCAATGAGCTCTTGGCCCT...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGTTGCAGTGGGAGCTCTaGGGGCTGCAGATGCATATA +
Preference number: 5 (lower is better)
Translates to: SLRIIPGARAQKESCEGELQWEL*GLQMHI
Trigger: TATATGCATCTGCAGCCCCAAGAGCTCCCACTGCAA...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCAGCTCACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAATTGCAGTGGGAGCTCTaGGGGCTGCAGATGCATATA +
Preference number: 5 (lower is better)
Translates to: PAHQSPLAITLSQGLGWKLQWEL*GLQMHI
Trigger: TATATGCATCTGCAGCCCCAAGAGCTCCCACTGCAA...TTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTTGCAGTGGGAGCTCTaGGGGCTGCAGATGCATATA +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMLQWEL*GLQMHI
Trigger: TATATGCATCTGCAGCCCCAAGAGCTCCCACTGCAA...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACACATCTTCCCCAACACTaGTCTTGCAGTGGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTHLPQH*SCSGSS
Trigger: AGAGCTCCCACTGCAAGACAAGTGTTGGGGAAGATG...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACCTGAGGGGGTTAGGTaGACATCAGCCTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRPEGVR*TSAWSV
Trigger: AACTGACCAGGCTGATGTCAACCTAACCCCCTCAGG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTACCTGAGGGGGTTAGGTaGACATCAGCCTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVPEGVR*TSAWSV
Trigger: AACTGACCAGGCTGATGTCAACCTAACCCCCTCAGG...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCGCTTCCATAGTCCTTTaGTTTCCAGGTGCGTATCCA +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPASIVL*FPGAYP
Trigger: TGGATACGCACCTGGAAACAAAAGGACTATGGAAGC...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTGCTTCCATAGTCCTTTaGTTTCCAGGTGCGTATCCA +
Preference number: 5 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSASIVL*FPGAYP
Trigger: TGGATACGCACCTGGAAACAAAAGGACTATGGAAGC...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp TCCCTCTTGCACAACTTCAGGGGCCGCCTTGCATGGTTATCTTTGTaGATTGTGTCGTGCCTACCCTGTGTGTCCTTACAGGAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SLLHNFRGRLAWLSL*IVSCLPCVSLQERL
Trigger: GAGCCTTTCCTGTAAGGACACACAGGGTAGGCACGACACAATTCACAAAGATAACCATGCAAGGCGGCCCCTGAAGTTGTGCAAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 90 bp ATGAACTTGAGGAGCTGCTCCAGCATGTCCTTAGCAAGGTCCTCCTaGTCATCCATCTTCAAGATGGCCTGCCGGATCTCCTCGTTAGAA +
Preference number: 5 (lower is better)
Translates to: MNLRSCSSMSLARSS*SSIFKMACRISSLE
Trigger: TTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATGAGCAGGAGGACCTTGCTAAGGACATGCTGGAGCAGCTCCTCAAGTTCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000496787.1
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS GCA 90 bp TTGCATCTTTACTCCTGTCGCCTCCACTACCTAGAATGCCCCATCTaGTCTCTCCACCCAATCAGGTCTGTCCAATTTACTCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LHLYSCRLHYLECPI*SLHPIRSVQFTLGC
Trigger: GCAGCCCAGAGTAAATTGGACAGACCTGATTGGGTGGAGAGAGCAGATGGGGCATTCTAGGTAGTGGAGGCGACAGGAGTAAAGATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCTCCAGCTCCAGCATaGAGGACAGCATTGATGAAG +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSPAPA*RTALMK
Trigger: CTTCATCAATGCTGTCCTCAATGCTGGAGCTGGAGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTTCATGTTGCCGGAGCTaGTCAATCACAGGCTGTATA +
Preference number: 5 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLSCCRS*SITGCI
Trigger: TATACAGCCTGTGATTGACAAGCTCCGGCAACATGA...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCACGATGTTCTTGACATaGAAGTTCTCCAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRTMFLT*KFSKGA
Trigger: GGCTCCCTTGGAGAACTTCAATGTCAAGAACATCGT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCTTGTGGAGCCCTCCTTCACTTCATTCTCGTaGATGAGCATGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: VSSLPWWVGMPDTLVEPSFTSFS*MSMLTM
Trigger: CATCGTCAACATGCTCATCAACGAGAATGAAGTGAA...GGAGGGCTCCACAAGCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CACCAGTCTCCACTGGCAATAACCCTGAGCCAGGGATTAGGTTGGAAAGTGAGACCTTCTCCAATGTCTTaGTCTCGCATTCCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: HQSPLAITLSQGLGWKVRPSPMS*SRIPAP
Trigger: AGGAGCGGGAATGCGAGACAAAGACATTGGAGAAGG...TCTCACTTTCCAACCTAATCCCTGGCTCAGGGTTATTGCCAGTGGAGACTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCCTTCTCCAATGTCTTaGTCTCGCATTCCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVPSPMS*SRIPAP
Trigger: AGGAGCGGGAATGCGAGACAAAGACATTGGAGAAGG...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGAGGCAGGTCATTGGTaGTCATTGAGGAAGACAAGG +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTEAGHW*SLRKTR
Trigger: CCTTGTCTTCCTCAATGACAACCAATGACCTGCCTC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTAAAGGATGATGCAGTTTaGGGCCCTCCGGCCATCAAT +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVKDDAV*GPPAIN
Trigger: ATTGATGGCCGGAGGGCCCAAAACTGCATCATCCTT...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGAAGGATGATGCAGTTTaGGGCCCTCCGGCCATCAAT +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELKDDAV*GPPAIN
Trigger: ATTGATGGCCGGAGGGCCCAAAACTGCATCATCCTT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATTCTCTGGGATGAACTaGAGGAGCTGCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVFSGMN*RSCSSM
Trigger: CATGCTGGAGCAGCTCCTCAAGTTCATCCCAGAGAA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTTCTGCTAGGTTGACTTaGGCAGCTTCTGGAAGATGT +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSSARLT*AASGRC
Trigger: ACATCTTCCAGAAGCTGCCAAAGTCAACCTAGCAGA...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCCAGTTCTGCTAGGTaGACTTTGGCAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSSSAR*TLAASG
Trigger: TCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGTCCAGTTCTGCTAGGTaGACTTTGGCAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTSSSAR*TLAASG
Trigger: TCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGGA...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGTCCAGTTCTGCTAGGTaGACTTTGGCAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: QGCGPLQSRSGTVLCQHMSSSAR*TLAASG
Trigger: TCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGGA...CATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCATTCAAGAGGAAAGTTaGCCCCCAGGTCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: HHCSPCYTGTLDKAVDLSIQEES*PPGQCS
Trigger: AGAACATTGACCTGGGGGCAAACTTTCCTCTTGAAT...GGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGGCTGTGGCTTCTGCCTaGAAGCTAGTGTTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTAVASA*KLVLEK
Trigger: CTTCTCTAACACTAGCTTCAAGGCAGAAGCCACAGC...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTACTCGGAACGTGGTATaGAATAAGAGCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSTRNVV*NKSLDG
Trigger: TCCATCAAGGCTCTTATTCAATACCACGTTCCGAGT...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCACTCGGAACGTGGTATaGAATAAGAGCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: IAPRATQELWTRLWTSPVTRNVV*NKSLDG
Trigger: TCCATCAAGGCTCTTATTCAATACCACGTTCCGAGT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TGGCCCTCAGACCTCTCAGGAACCAACTCCCCAACGCCAGTGGACACATGGTTCTCTGGAACAACGTATTaGTGTCCTCTGTCAACAGTT +
Preference number: 5 (lower is better)
Translates to: WPSDLSGTNSPTPVDTWFSGTTY*CPLSTV
Trigger: AACTGTTGACAGAGGACACAAATACGTTGTTCCAGA...GAACCATGTGTCCACTGGCGTTGGGGAGTTGGTTCCTGAGAGGTCTGAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTGGTCCAAGGCACTGTaGGAGATCTGGCTACAGTGG +
Preference number: 5 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDWSKAL*EIWLQW
Trigger: CCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCCCCTTCTTACTCAGTaGAGTATGAGTCCATGGTCC +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQPLLTQ*SMSPWS
Trigger: GGACCATGGACTCATACTCAACTGAGTAAGAAGGGG...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp TTCCTCCAACACCTAGAACAGGGCTGGCATGTAATAAACATCAGGTaGATGCATGAGCATGCCAAGGCAGCAAGAGCCACCCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: FLQHLEQGWHVINIR*MHEHAKAARATPCH
Trigger: ATGGCATGGGGTGGCTCTTGCTGCCTTGGCATGCTCATGCATTCACCTGATGTTTATTACATGCCAGCCCTGTTCTAGGTGTTGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405961.3
ENST00000475489.5
CDS GCA 90 bp ATGTCCTTAGCAAGGTCCTCCTGCTCATCCATCTTCAAGATGGCCTaGCGGATCTCCTCGTTAGAAAGCTTCAACCTAAGGCAAAACCCC +
Preference number: 5 (lower is better)
Translates to: MSLARSSCSSIFKMA*RISSLESFNLRQNP
Trigger: GGGGTTTTGCCTTAGGTTGAAGCTTTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATGAGCAGGAGGACCTTGCTAAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 90 bp GTGTGGCCTTTGCATCTTTACTCCTGTCGCCTCCACTACCTAGAATaGCCCATCTGCTCTCTCCACCCAATCAGGTCTGTCCAATTTACT +
Preference number: 5 (lower is better)
Translates to: VWPLHLYSCRLHYLE*PICSLHPIRSVQFT
Trigger: AGTAAATTGGACAGACCTGATTGGGTGGAGAGAGCAGATGGGGCATTCTAGGTAGTGGAGGCGACAGGAGTAAAGATGCAAAGGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCATAGCCTCTCGGTTTTaGTCAGTGAGATCCAATTCA +
Preference number: 5 (lower is better)
Translates to: IAPRATQELWTRLWTSPVIASRF*SVRSNS
Trigger: TGAATTGGATCTCACTGACAAAAACCGAGAGGCTAT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCCTATAGCCTCTCGGTTTTaGTCAGTGAGATCCAATTCA +
Preference number: 5 (lower is better)
Translates to: SGGLSSGLPRLGSSSPSPIASRF*SVRSNS
Trigger: TGAATTGGATCTCACTGACAAAAACCGAGAGGCTAT...AGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS-3UTR CAA 90 bp TTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTATAGCCTCTCGGTTTTaGTCAGTGAGATCCAATTCA +
Preference number: 5 (lower is better)
Translates to: LLPVLHRNSGQGCGPLQSIASRF*SVRSNS
Trigger: TGAATTGGATCTCACTGACAAAAACCGAGAGGCTAT...AGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTCTCCAGCTCCAGCATaGAGGACAGCATTGATGAAG +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELSPAPA*RTALMK
Trigger: CTTCATCAATGCTGTCCTCAATGCTGGAGCTGGAGA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGGATGGCATTTTCATGTaGCCGGAGCTTGTCAATCAC +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQDGIFM*PELVNH
Trigger: GTGATTGACAAGCTCCGGCAACATGAAAATGCCATC...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGCCCTCGTTGATGAGCATGTaGACGATGTTCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: VDLSSLDLELFCASTWVPSLMSM*TMFLTL
Trigger: CAATGTCAAGAACATCGTCAACATGCTCATCAACGA...GGGCACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTTTCACTTCATTCTCGTaGATGAGCATGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSFTSFS*MSMLTM
Trigger: CATCGTCAACATGCTCATCAACGAGAATGAAGTGAA...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAAGCTTGTCCTTCATTTaGTTCAGCGTCCGCATCATC +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSLSFI*FSVRII
Trigger: GATGATGCGGACGCTGAACAAAATGAAGGACAAGCT...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGAGGCAGGTCATTGGTaGTCATTGAGGAAGACAAGG +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPEAGHW*SLRKTR
Trigger: CCTTGTCTTCCTCAATGACAACCAATGACCTGCCTC...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGTCTGCTAGGTTGACTTaGGCAGCTTCTGGAAGATGT +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQSARLT*AASGRC
Trigger: ACATCTTCCAGAAGCTGCCAAAGTCAACCTAGCAGA...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTCCAGTTCTGCTAGGTaGACTTTGGCAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELSSSAR*TLAASG
Trigger: TCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGGA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTTCTGGAACAACGTATTaGTGTCCTCTGTCAACAGTT +
Preference number: 5 (lower is better)
Translates to: HCSPCYTGTLDKAVDLSSSGTTY*CPLSTV
Trigger: AACTGTTGACAGAGGACACAAATACGTTGTTCCAGA...ACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TGCGGTCGATGTAATAGTCAGGCCAGCTGGTTGCCAGCTTGTTGGGGTCCTCCTGAGAATCCTATTTCTTaGAGTGTAAGCTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: CGRCNSQASWLPACWGPPENPIS*SVSSRT
Trigger: TGTCCTGGAGCTTACACTCAAAGAAATAGGATTCTC...AGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATTACATCGACCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS TCA 90 bp CAAGAAGAGAGGGAGGATATGCTGAGGAGAACATGGACAGATGTGTaGGCCCTAGCCTGGGACAGAGTGGAGACTAAAGATCCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: QEEREDMLRRTWTDV*ALAWDRVETKDPKE
Trigger: CTCTTTTGGATCTTTAGTCTCCACTCTGTCCCAGGCTAGGGCTCACACATCTGTCCATGTTCTCCTCAGCATATCCTCCCTCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475489.5
CDS-3UTR CAA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATTCTGCAAAGCGGATGTaGAGCTCCTCTGCGTTCGGG +
Preference number: 5 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNSAKRM*SSSAFG
Trigger: CCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGA...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGGTTAGGCAGGGCCAGTCTCAAAGAAGATGAAAGGCCAACTCGGAACGTGGTATCATGTTGCCGGAGCTaGTCAATCACAGGCTGTATA +
Preference number: 5 (lower is better)
Translates to: RLGRASLKEDERPTRNVVSCCRS*SITGCI
Trigger: TATACAGCCTGTGATTGACAAGCTCCGGCAACATGA...TACCACGTTCCGAGTTGGCCTTTCATCTTCTTTGAGACTGGCCCTGCCTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGATGGCATTTTCATGTaGCCGGAGCTTGTCAATCAC +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPDGIFM*PELVNH
Trigger: GTGATTGACAAGCTCCGGCAACATGAAAATGCCATC...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGATGGCATTTTCATGTaGCCGGAGCTTGTCAATCAC +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELDGIFM*PELVNH
Trigger: GTGATTGACAAGCTCCGGCAACATGAAAATGCCATC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp ATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCATGTTGACGATGTTCTaGACATTGAAGTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: IAPRATQELWTRLWTSPVMLTMF*TLKFSK
Trigger: CTTGGAGAACTTCAATGTCAAGAACATCGTCAACAT...GACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTCGTTGATGAGCATGTaGACGATGTTCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVSLMSM*TMFLTL
Trigger: CAATGTCAAGAACATCGTCAACATGCTCATCAACGA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCCATCATTGCTCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTTCGTTGATGAGCATGTaGACGATGTTCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: SIIAPRATQELWTRLWTSSLMSM*TMFLTL
Trigger: CAATGTCAAGAACATCGTCAACATGCTCATCAACGA...AGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGAGCAATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATGGGTGTTCACTTCATTCTCGTaGATGAGCATGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: AVDLSSLDLELFCASTWVFTSFS*MSMLTM
Trigger: CATCGTCAACATGCTCATCAACGAGAATGAAGTGAA...CACCCATGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACATCCTGGAATTTCTTCTaGAAGAAGAGGGCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTSWNFF*KKRACS
Trigger: ACTGCAAGCCCTCTTCTTCAAGAAGAAATTCCAGGA...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGTCCTGGAATTTCTTCTaGAAGAAGAGGGCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQSWNFF*KKRACS
Trigger: ACTGCAAGCCCTCTTCTTCAAGAAGAAATTCCAGGA...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATCGCTTGCGGCTGCGCTaGAGCTTGCATAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNRLRLR*SLHKSL
Trigger: CAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCG...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGCACAATTCAAGAGGAAAGTTaGCCCCCAGGTCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: DKAVDLSSLDLELFCASTIQEES*PPGQCS
Trigger: AGAACATTGACCTGGGGGCAAACTTTCCTCTTGAAT...TGTGCTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAACATCTTCCCCAACACTaGTCTTGCAGTGGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMEHLPQH*SCSGSS
Trigger: AGAGCTCCCACTGCAAGACAAGTGTTGGGGAAGATG...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCTGGTCAGTTTGGGAGAGGACCTTTAGAGGCCTCACCCACAACCTCCCATCTTGTCCTCTGTCAACAGTaGAACCAAATTCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PGQFGRGPLEASPTTSHLVLCQQ*NQILLF
Trigger: GAAAAGCAGAATTTGGTTCAACTGTTGACAGAGGAC...AAGATGGGAGGTTGTGGGTGAGGCCTCTAAAGGTCCTCTCCCAAACTGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp AAAATAGAAAGGGGGCAAGAGAGAGACGTAGAGACAGAGGCAAGCTaGAGAAACACGGAGATGGAGACAGCAGAGAGAAGAATGCACAGC +
Preference number: 5 (lower is better)
Translates to: KIERGQERDVETEAS*RNTEMETAERRMHS
Trigger: GCTGTGCATTCTTCTCTCTGCTGTCTCCATCTCCGTGTTTCTTCAGCTTGCCTCTGTCTCTACGTCTCTCTCTTGCCCCCTTTCTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475489.5
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGATAGCCTCTCGGTTTTaGTCAGTGAGATCCAATTCA +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQIASRF*SVRSNS
Trigger: TGAATTGGATCTCACTGACAAAAACCGAGAGGCTAT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATGATGGCATTTTCATGTaGCCGGAGCTTGTCAATCAC +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDDGIFM*PELVNH
Trigger: GTGATTGACAAGCTCCGGCAACATGAAAATGCCATC...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GCCCCTTCTTACTCAGTTGAGTATGAGTCCATGGTCCAAGGCACTGTTGGAGATACGATGTTCTTGACATaGAAGTTCTCCAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: APSYSVEYESMVQGTVGDTMFLT*KFSKGA
Trigger: GGCTCCCTTGGAGAACTTCAATGTCAAGAACATCGT...ATCTCCAACAGTGCCTTGGACCATGGACTCATACTCAACTGAGTAAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGCATGTTGACGATGTTCTaGACATTGAAGTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LFPGAYPVFHGGWECQTRMLTMF*TLKFSK
Trigger: CTTGGAGAACTTCAATGTCAAGAACATCGTCAACAT...GCGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTATGTTGACGATGTTCTaGACATTGAAGTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PVLHRNSGQGCGPLQSRSMLTMF*TLKFSK
Trigger: CTTGGAGAACTTCAATGTCAAGAACATCGTCAACAT...AGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATCGGCTGCGCTTGAGCTaGCATAAGTCCTTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNRLRLS*HKSLSK
Trigger: CTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCG...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTACAGGTCAATGTTCTGTaGAGCCTCCCCTTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GWEGLSNLYEVENYGMELQVNVL*SLPLRE
Trigger: TTCTCTCAAGGGGAGGCTCAACAGAACATTGACCTG...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGCCTCAGAATAATACCTGGGGCCAGGGCACAGAAGGAATCATGTGAAGGGGAGATCATCCTTCCAACATaGACTGTTCTCTGGAACCTA +
Preference number: 5 (lower is better)
Translates to: SLRIIPGARAQKESCEGEIILPT*TVLWNL
Trigger: TAGGTTCCAGAGAACAGTCAATGTTGGAAGGATGAT...CTCCCCTTCACATGATTCCTTCTGTGCCCTGGCCCCAGGTATTATTCTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AGTCCTTTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAACTCGGAACGTGGTATaGAATAAGAGCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: SPFVSRCVSSLPWWVGMPTRNVV*NKSLDG
Trigger: TCCATCAAGGCTCTTATTCAATACCACGTTCCGAGT...TGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATTGGTCCAAGGCACTGTaGGAGATCTGGCTACAGTGG +
Preference number: 5 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNWSKAL*EIWLQW
Trigger: CCACTGTAGCCAGATCTCCAACAGTGCCTTGGACCA...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GGGTGGGAGGGCCTGAGCAATTTATATGAAGTAGAGAACTATGGGATGGAGCTACCCCTTCTTACTCAGTaGAGTATGAGTCCATGGTCC +
Preference number: 5 (lower is better)
Translates to: GWEGLSNLYEVENYGMELPLLTQ*SMSPWS
Trigger: GGACCATGGACTCATACTCAACTGAGTAAGAAGGGG...TAGCTCCATCCCATAGTTCTCTACTTCATATAAATTGCTCAGGCCCTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GTGTCCGGAGGGCTGTCTTCAGGTCTTCCACGACTTGGTTCCTCATCTCCGTCTCTATTTTATTCACTGTaGTTCCTCCAACACCTAGAA +
Preference number: 5 (lower is better)
Translates to: VSGGLSSGLPRLGSSSPSLFYSL*FLQHLE
Trigger: TTCTAGGTGTTGGAGGAACAACAGTGAATAAAATAG...AGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACAGCCCTCCGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494405.2
CDS GCA 90 bp TTCCCAGCCAAACTCATAACTCTTAAGGCCCTGCATGTGTTTTTATaGAAGCCTTCCAGGTCCCAGTACTCTTCACCTGTTACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: FPAKLITLKALHVFL*KPSRSQYSSPVTFQ
Trigger: CTGGAAGGTAACAGGTGAAGAGTACTGGGACCTGGAAGGCTTGCATAAAAACACATGCAGGGCCTTAAGAGTTATGAGTTTGGCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATAAGAAGTCTAAATGTTaGTCCAGGATGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDKKSKC*SRMAFS
Trigger: TGAAAATGCCATCCTGGACAAACATTTAGACTTCTT...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATATCTGGGAAGCACTCTaGGTGTCGATGTGGACCATG +
Preference number: 5 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNIWEAL*VSMWTM
Trigger: CATGGTCCACATCGACACCAAGAGTGCTTCCCAGAT...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGATGTTGACGATGTTCTaGACATTGAAGTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQMLTMF*TLKFSK
Trigger: CTTGGAGAACTTCAATGTCAAGAACATCGTCAACAT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTTCGTTGATGAGCATGTaGACGATGTTCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVSLMSM*TMFLTL
Trigger: CAATGTCAAGAACATCGTCAACATGCTCATCAACGA...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCACTTCATTCTCGTaGATGAGCATGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELFTSFS*MSMLTM
Trigger: CATCGTCAACATGCTCATCAACGAGAATGAAGTGAA...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACATTCAAGAGGAAAGTTaGCCCCCAGGTCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDIQEES*PPGQCS
Trigger: AGAACATTGACCTGGGGGCAAACTTTCCTCTTGAAT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp CACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTATCATCCTTCCAACATaGACTGTTCTCTGGAACCTA +
Preference number: 5 (lower is better)
Translates to: HRNSGQGCGPLQSRSGTVIILPT*TVLWNL
Trigger: TAGGTTCCAGAGAACAGTCAATGTTGGAAGGATGAT...AACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCCCCGTGCTACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATAAGATCAAATGTATCTaGAACAGCTTCCATAGTCCT +
Preference number: 5 (lower is better)
Translates to: SPCYTGTLDKAVDLSSLDKIKCI*NSFHSP
Trigger: AGGACTATGGAAGCTGTTCAAGATACATTTGATCTT...ATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTAGCACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGGTCCTCTGTCAACAGTaGAACCAAATTCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELVLCQQ*NQILLF
Trigger: GAAAAGCAGAATTTGGTTCAACTGTTGACAGAGGAC...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp TGCTCCGGAGGAAATTTAGCAGACAGGTCAAGCCCTCCAGCTCAATaGAGCGGGTCACAAACCTACAAATCAGAGCCATTAACAAACATA +
Preference number: 5 (lower is better)
Translates to: CSGGNLADRSSPPAQ*SGSQTYKSEPLTNI
Trigger: TATGTTTGTTAATGGCTCTGATTTGTAGGTTTGTGACCCGCTTCATTGAGCTGGAGGGCTTGACCTGTCTGCTAAATTTCCTCCGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS GCA 90 bp TTGGTCTACATGGTTGAGCAGTGCTTCAGTGCTGCTTTATCATCGTaGTCCAGCTGTTTACAGCTCATATGTATTCCCTGCCTAGCTCAT +
Preference number: 5 (lower is better)
Translates to: LVYMVEQCFSAALSS*SSCLQLICIPCLAH
Trigger: ATGAGCTAGGCAGGGAATACATATGAGCTGTAAACAGCTGGAGCACGATGATAAAGCAGCACTGAAGCACTGCTCAACCATGTAGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACATAGCCTCTCGGTTTTaGTCAGTGAGATCCAATTCA +
Preference number: 5 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDIASRF*SVRSNS
Trigger: TGAATTGGATCTCACTGACAAAAACCGAGAGGCTAT...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGTTCTGTGCCAGAAGAAGTCTAAATGTTaGTCCAGGATGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: SGQGCGPLQSRSGTVLCQKKSKC*SRMAFS
Trigger: TGAAAATGCCATCCTGGACAAACATTTAGACTTCTT...CTGGCACAGAACAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TCTAGATACAGCCATCCCATCCACCAAGGCCAGCATGAGATGGACAAAATGGAATCCTGGAATTTCTTCTaGAAGAAGAGGGCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: SRYSHPIHQGQHEMDKMESWNFF*KKRACS
Trigger: ACTGCAAGCCCTCTTCTTCAAGAAGAAATTCCAGGA...TTCCATTTTGTCCATCTCATGCTGGCCTTGGTGGATGGGATGGCTGTATCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TTTGTTTCCAGGTGCGTATCCAGTCTTCCATGGTGGGTGGGAATGCCAGACACGAAGATCAAATGTATCTaGAACAGCTTCCATAGTCCT +
Preference number: 5 (lower is better)
Translates to: FVSRCVSSLPWWVGMPDTKIKCI*NSFHSP
Trigger: AGGACTATGGAAGCTGTTCAAGATACATTTGATCTT...CGTGTCTGGCATTCCCACCCACCATGGAAGACTGGATACGCACCTGGAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp GAAGAAAGCAAGACCAAGAAACAACCTATTAAGGACCAGCTCAGCCACCCCGACTCTGGAACAACGTATTaGTGTCCTCTGTCAACAGTT +
Preference number: 5 (lower is better)
Translates to: EESKTKKQPIKDQLSHPDSGTTY*CPLSTV
Trigger: AACTGTTGACAGAGGACACAAATACGTTGTTCCAGA...GTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTCTTGCTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp CTGTGTGGTTTTCCAGGTTCCTGCAACTCTGAAATGGTGTATATTTaGATCCTCCAATGTTACAAGGTCAGTCTGGCTCAGTGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LCGFPGSCNSEMVYI*ILQCYKVSLAQCGD
Trigger: GTCTCCACACTGAGCCAGACTGACCTTGTAACATTGGAGGATTCAAATATACACCATTTCAGAGTTGCAGGAACCTGGAAAACCACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475489.5
CDS GCA 90 bp CAGCTCATATGTATTCCCTGCCTAGCTCATTTATGGTATGGACACTaGTTTTATCCCTTTTCCGTCTTCTGCAGAGTCAGGACCCAGTTT +
Preference number: 5 (lower is better)
Translates to: QLICIPCLAHLWYGH*FYPFSVFCRVRTQF
Trigger: AAACTGGGTCCTGACTCTGCAGAAGACGGAAAAGGGATAAAAGCAGTGTCCATACCATAAATGAGCTAGGCAGGGAATACATATGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CCA 90 bp ACAGCCAACAGAGAATTAAACATGCACAACATTAGCCAAGACATTTaGGGACCCAGAAATAGCATGACAGACACAGGGATCCCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: TANRELNMHNISQDI*GPRNSMTDTGIPQH
Trigger: ATGCTGAGGGATCCCTGTGTCTGTCATGCTATTTCTGGGTCCCCAAATGTCTTGGCTAATGTTGTGCATGTTTAATTCTCTGTTGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS-3UTR CAA 90 bp TACACAGGAACTCTGGACAAGGCTGTGGACCTCTCCAGTCTAGATCTGGAACTGAAGAAGTCTAAATGTTaGTCCAGGATGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: YTGTLDKAVDLSSLDLELKKSKC*SRMAFS
Trigger: TGAAAATGCCATCCTGGACAAACATTTAGACTTCTT...CAGTTCCAGATCTAGACTGGAGAGGTCCACAGCCTTGTCCAGAGTTCCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS-3UTR CAA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATAGCTTGTCCTTCATTTaGTTCAGCGTCCGCATCATC +
Preference number: 5 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNSLSFI*FSVRII
Trigger: GATGATGCGGACGCTGAACAAAATGAAGGACAAGCT...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp AAAATCTCAATCTCAGCAATTGCACTCAATTCAGTAATTCTTGACTaGGCCCCTATCATGAGCCAGGTGTTGAGGTTGGAGATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KISISAIALNSVILD*APIMSQVLRLEMQS
Trigger: GCTCTGCATCTCCAACCTCAACACCTGGCTCATGATAGGGGCTCAGTCAAGAATTACTGAATTGAGTGCAATTGCTGAGATTGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS GCA 90 bp TTCTCCAGTTCTGCTAGGTTGACTTTGGCAGCTTCTGGAAGATGTTaGAGCTCTGAAGGCATGTTTAGAATATCAGGAAAATGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FSSSARLTLAASGRC*SSEGMFRISGKCFS
Trigger: GGAGAAGCATTTTCCTGATATTCTAAACATGCCTTCAGAGCTGCAACATCTTCCAGAAGCTGCCAAAGTCAACCTAGCAGAACTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CCA 90 bp CTGTTTACAGCTCATATGTATTCCCTGCCTAGCTCATTTATGGTATaGACACTGCTTTTATCCCTTTTCCGTCTTCTGCAGAGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LFTAHMYSLPSSFMV*TLLLSLFRLLQSQD
Trigger: GTCCTGACTCTGCAGAAGACGGAAAAGGGATAAAAGCAGTGTCCATACCATAAATGAGCTAGGCAGGGAATACATATGAGCTGTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CCA 90 bp TCCAGCTGTTTACAGCTCATATGTATTCCCTGCCTAGCTCATTTATaGTATGGACACTGCTTTTATCCCTTTTCCGTCTTCTGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SSCLQLICIPCLAHL*YGHCFYPFSVFCRV
Trigger: GACTCTGCAGAAGACGGAAAAGGGATAAAAGCAGTGTCCATACCATAAATGAGCTAGGCAGGGAATACATATGAGCTGTAAACAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGACGCTTGCGGCTGCGCTaGAGCTTGCATAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: NFTLATKLARETYLKVAGRLRLR*SLHKSL
Trigger: CAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCG...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS GCA 90 bp GCTTTATCATCGTGCTCCAGCTGTTTACAGCTCATATGTATTCCCTaGCTAGCTCATTTATGGTATGGACACTGCTTTTATCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: ALSSCSSCLQLICIP*LAHLWYGHCFYPFS
Trigger: GGAAAAGGGATAAAAGCAGTGTCCATACCATAAATGAGCTAGGCAGGGAATACATATGAGCTGTAAACAGCTGGAGCACGATGATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS-3UTR CAA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAGACTCCCGGGCCAGCTaGTCCTTCATTTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: NFTLATKLARETYLKVAGDSRAS*SFILFS
Trigger: GCTGAACAAAATGAAGGACAAGCTGGCCCGGGAGTC...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAATGACAGGGACAAACTaGTCACTGGGCTCCCGTACC +
Preference number: 5 (lower is better)
Translates to: NFTLATKLARETYLKVAGMTGTN*SLGSRT
Trigger: GGTACGGGAGCCCAGTGACAAGTTTGTCCCTGTCAT...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS-3UTR CAA 90 bp TATATAATGCCTCCTCTGTTCCCATTCAAGAGGAAAGTTTGCCCCCAGGTCAATGTCCTCTGTCAACAGTaGAACCAAATTCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: YIMPPLFPFKRKVCPQVNVLCQQ*NQILLF
Trigger: GAAAAGCAGAATTTGGTTCAACTGTTGACAGAGGAC...ATTGACCTGGGGGCAAACTTTCCTCTTGAATGGGAACAGAGGAGGCATTATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS TCA 90 bp CTATGTCTTGCCATCAAACTCTTTAGTCCTTTGTATACATTGTCCTaGTCTTTACCAAAACCTAGATGCTGGCCCAAGCTCTTTGCTTAT +
Preference number: 5 (lower is better)
Translates to: LCLAIKLFSPLYTLS*SLPKPRCWPKLFAY
Trigger: ATAAGCAAAGAGCTTGGGCCAGCATCTAGGTTTTGGTAAAGATCAGGACAATGTATACAAAGGACTAAAGAGTTTGATGGCAAGACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491083.2
CDS-3UTR CAA 90 bp AATTTTACATTGGCCACAAAATTAGCTAGAGAAACTTATCTAAAGGTGGCAGGAAGCTTGTCCTTCATTTaGTTCAGCGTCCGCATCATC +
Preference number: 5 (lower is better)
Translates to: NFTLATKLARETYLKVAGSLSFI*FSVRII
Trigger: GATGATGCGGACGCTGAACAAAATGAAGGACAAGCT...TCCTGCCACCTTTAGATAAGTTTCTCTAGCTAATTTTGTGGCCAATGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
CDS GCA 72 bp GAGGTACGGCGCCGCCGCCCGCGCTCCGCTCGCTGCTaGGTGCTCCGCGCTATCCCCGGGAAGCCGCGGCTG +
Preference number: 6 (lower is better)
Translates to: EVRRRRPRSARC*VLRAIPGKPRL
Trigger: CAGCCGCGGCTTCCCGGGGATAGCGCGGAGCACGCAGCAGCGAGCGGAGCGCGGGCGGCGGCGCCGTACCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633794.1
CDS GCA 72 bp CCAGGTCATCGAACTCTCCTCCCTCCTCCAGCGAGCTaGCTGCAGCCAGGACCTTCCGCTGCCGCTGCCACC +
Preference number: 6 (lower is better)
Translates to: PGHRTLLPPPAS*LQPGPSAAAAT
Trigger: GGTGGCAGCGGCAGCGGAAGGTCCTGGCTGCAGGCAGCTCGCTGGAGGAGGGAGGAGAGTTCGATGACCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CCA 72 bp GCGCCCGCCGCTCCTCCTCCTCCTTCCTCCTCCTCATaGCCTCTAGATCCTGCCGGGCCTCTGAGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: APAAPPPPSSSS*PLDPAGPLRRP
Trigger: AGGCCTTCTCAGAGGCCCGGCAGGATCTAGAGGCCATGAGGAGGAGGAAGGAGGAGGAGGAGCGGCGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS GCA 72 bp CAAGCGAGGCCCTCCGTGGGCTTAGAGCAACTCAGCTaGCAGACGCTGACCAGGCTGGGCAAGGGCCTCGTG +
Preference number: 6 (lower is better)
Translates to: QARPSVGLEQLS*QTLTRLGKGLV
Trigger: CACGAGGCCCTTGCCCAGCCTGGTCAGCGTCTGGCAGCTGAGTTGCTCTAAGCCCACGGAGGGCCTCGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp TCAGGGTCCACACCCCGCTCATCCTGGAGGACAATCTaGTGGAGGATGCGGTCCAGGAGCTGCCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: SGSTPRSSWRTI*WRMRSRSCHCW
Trigger: CCAGCAGTGGCAGCTCCTGGACCGCATCCTCCAGCAGATTGTCCTCCAGGATGAGCGGGGTGTGGACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS GCA 72 bp CTGGGCAAGGGCCTCGTGACTGGGCAGTTTCCTGCCTaGAGAGCCCCAAACTGCTGCTCAAGGCAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: LGKGLVTGQFPA*RAPNCCSRQVP
Trigger: GGGAACCTGCCTTGAGCAGCAGTTTGGGGCTCTGCAGGCAGGAAACTGCCCAGTCACGAGGCCCTTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 72 bp CGGTTTATTGCCCGCTCCCGGGTAACTTCCAGGGCCTaGCTCCCTGATCGCTTGCGGCTGCGCTTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: RFIARSRVTSRA*LPDRLRLRLSL
Trigger: CAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGTTACCCGGGAGCGGGCAATAAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 72 bp TCCCGACGCCTGGTAAAGTCAGGGCATGAGGTTGGTTaGCGACCGCAGGTGCTGAGAGCCCCAGAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: SRRLVKSGHEVG*RPQVLRAPESG
Trigger: CCCGGACTCTGGGGCTCTCAGCACCTGCGGTCGCAAACCAACCTCATGCCCTGACTTTACCAGGCGTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398904.6
ENST00000538976.5
CDS CAA 90 bp ACTTCCAGGGCCTGGCTCCCTGATCGCTTGCGGCTGCGCTTGAGCTaGCATAAGTCCTTGTCGAAGACCTCCCCAGAGCGCAGGGCCGAC +
Preference number: 6 (lower is better)
Translates to: TSRAWLPDRLRLRLS*HKSLSKTSPERRAD
Trigger: GTCGGCCCTGCGCTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 90 bp TGGCTCCCTGATCGCTTGCGGCTGCGCTTGAGCTTGCATAAGTCCTaGTCGAAGACCTCCCCAGAGCGCAGGGCCGACACCAGGTCATCG +
Preference number: 6 (lower is better)
Translates to: WLPDRLRLRLSLHKS*SKTSPERRADTRSS
Trigger: CGATGACCTGGTGTCGGCCCTGCGCTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 90 bp CGGGTAACTTCCAGGGCCTGGCTCCCTGATCGCTTGCGGCTGCGCTaGAGCTTGCATAAGTCCTTGTCGAAGACCTCCCCAGAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RVTSRAWLPDRLRLR*SLHKSLSKTSPERR
Trigger: CCTGCGCTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGTTACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS TCA 72 bp ACAAACTTGTCACTGGGCTCCCGTACCTGGCGCCTCTaGTACTCCAGCTCCACCTCCACCGCTCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: TNLSLGSRTWRL*YSSSTSTALRP
Trigger: GGGCCTGAGAGCGGTGGAGGTGGAGCTGGAGTATCAGAGGCGCCAGGTACGGGAGCCCAGTGACAAGTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000631498.1
ENST00000633794.1
CDS TCA 72 bp CCAGGGCCTGGCTCCCTGATCGCTTGCGGCTGCGCTTaGGCTTGCATAAGTCCTTGTCGAAGACCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: PGPGSLIACGCA*ACISPCRRPPQ
Trigger: CTGGGGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 72 bp GATCGCTTGCGGCTGCGCTTGAGCTTGCATAAGTCCTaGTCGAAGACCTCCCCAGAGCGCAGGGCCGACACC +
Preference number: 6 (lower is better)
Translates to: DRLRLRLSLHKS*SKTSPERRADT
Trigger: GGTGTCGGCCCTGCGCTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 72 bp GCCTGGCTCCCTGATCGCTTGCGGCTGCGCTTGAGCTaGCATAAGTCCTTGTCGAAGACCTCCCCAGAGCGC +
Preference number: 6 (lower is better)
Translates to: AWLPDRLRLRLS*HKSLSKTSPER
Trigger: GCGCTCTGGGGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 90 bp GGGCTGGAGAACTCCATGAACTGCAGAGGGTGGTTGTCCCGGAGGTaGATTTCGGGGATGTCACTGCCCCCGAAGCAGCACAGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: GLENSMNCRGWLSRR*ISGMSLPPKQHRKP
Trigger: GGGCTTCCTGTGCTGCTTCGGGGGCAGTGACATCCCCGAAATCAACCTCCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 90 bp ATTGCCCGCTCCCGGGTAACTTCCAGGGCCTGGCTCCCTGATCGCTaGCGGCTGCGCTTGAGCTTGCATAAGTCCTTGTCGAAGACCTCC +
Preference number: 6 (lower is better)
Translates to: IARSRVTSRAWLPDR*RLRLSLHKSLSKTS
Trigger: GGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGTTACCCGGGAGCGGGCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS GCA 72 bp TCTGTAAACAAGGGGCGGGTGGTCCCTGAGGCTGACTaGCCTGCTGTAGAAGAATGGGCCCTCCAGCCCCTT +
Preference number: 6 (lower is better)
Translates to: SVNKGRVVPEAD*PAVEEWALQPL
Trigger: AAGGGGCTGGAGGGCCCATTCTTCTACAGCAGGGCAGTCAGCCTCAGGGACCACCCGCCCCTTGTTTACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491083.2
CDS CAA 72 bp CGAGCCTGGCGCAGCTCCTGGGACTCCCGGGCCAGCTaGTCCTTCATTTTGTTCAGCGTCCGCATCATCTCT +
Preference number: 6 (lower is better)
Translates to: RAWRSSWDSRAS*SFILFSVRIIS
Trigger: AGAGATGATGCGGACGCTGAACAAAATGAAGGACAAGCTGGCCCGGGAGTCCCAGGAGCTGCGCCAGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp TCCAGGGCCTGGCTCCCTGATCGCTTGCGGCTGCGCTaGAGCTTGCATAAGTCCTTGTCGAAGACCTCCCCA +
Preference number: 6 (lower is better)
Translates to: SRAWLPDRLRLR*SLHKSLSKTSP
Trigger: TGGGGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 72 bp TCCCGGGTAACTTCCAGGGCCTGGCTCCCTGATCGCTaGCGGCTGCGCTTGAGCTTGCATAAGTCCTTGTCG +
Preference number: 6 (lower is better)
Translates to: SRVTSRAWLPDR*RLRLSLHKSLS
Trigger: CGACAAGGACTTATGCAAGCTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGTTACCCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS TCA 72 bp CTGTTTGTTCTGCAGCCGCGGGAAATGCTTAGGGGCTaGGATCATGCTGCTCCATGGCCTGAGCCAAGCGAG +
Preference number: 6 (lower is better)
Translates to: LFVLQPREMLRG*DHAAPWPEPSE
Trigger: CTCGCTTGGCTCAGGCCATGGAGCAGCATGATCTCAGCCCCTAAGCATTTCCCGCGGCTGCAGAACAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp AGGTGTGGATGCGGCTCTCACAGGTGGCGTGGTCCATaGTCCGGAGGAAATTTAGCAGACAGGTCAAGCCCT +
Preference number: 6 (lower is better)
Translates to: RCGCGSHRWRGP*SGGNLADRSSP
Trigger: AGGGCTTGACCTGTCTGCTAAATTTCCTCCGGAGCATGGACCACGCCACCTGTGAGAGCCGCATCCACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000632657.1
ENST00000633794.1
CDS GCA 72 bp TCGTCTGGCTGCATCTTGCTGTCATGCTCCCCGAAGTaGATCAAGGCCTTGGCGAACTTGTCCCTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SSGCILLSCSPK*IKALANLSLAS
Trigger: TGAGGCCAGGGACAAGTTCGCCAAGGCCTTGATGCACTTCGGGGAGCATGACAGCAAGATGCAGCCAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS GCA 72 bp CTGCCCCAAACCTCACCTCTGCCTGGAAAATTCCCTTaGCTCTCACCTCAGTGGCAGTGCTGCCTCACTTCC +
Preference number: 6 (lower is better)
Translates to: LPQTSPLPGKFP*LSPQWQCCLTS
Trigger: GGAAGTGAGGCAGCACTGCCACTGAGGTGAGAGGCAAGGGAATTTTCCAGGCAGAGGTGAGGTTTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CCA 72 bp GGGATGGGGCTGGAGAACTCCATGAACTGCAGAGGGTaGTTGTCCCGGAGGTTGATTTCGGGGATGTCACTG +
Preference number: 6 (lower is better)
Translates to: GMGLENSMNCRG*LSRRLISGMSL
Trigger: CAGTGACATCCCCGAAATCAACCTCCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCCCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS CCA 72 bp CCAGACTTCGGTCTAGCTCGTTCAGCAGGGTCTAGGTaGAAATGCAGGACAGAGCAGGAGGAGAGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: PDFGLARSAGSR*KCRTEQEERAE
Trigger: CTCAGCCCTCTCCTCCTGCTCTGTCCTGCATTTCCACCTAGACCCTGCTGAACGAGCTAGACCGAAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CAA 72 bp AACTCCATGAACTGCAGAGGGTGGTTGTCCCGGAGGTaGATTTCGGGGATGTCACTGCCCCCGAAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: NSMNCRGWLSRR*ISGMSLPPKQH
Trigger: GTGCTGCTTCGGGGGCAGTGACATCCCCGAAATCAACCTCCGGGACAACCACCCTCTGCAGTTCATGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp ATGGGGCTGGAGAACTCCATGAACTGCAGAGGGTGGTaGTCCCGGAGGTTGATTTCGGGGATGTCACTGCCC +
Preference number: 6 (lower is better)
Translates to: MGLENSMNCRGW*SRRLISGMSLP
Trigger: GGGCAGTGACATCCCCGAAATCAACCTCCGGGACAACCACCCTCTGCAGTTCATGGAGTTCTCCAGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp ATGGCTAGGATGACCTCTAGCATCTGTCTAAGACGCTaGCTGCGGACCAGCTCCCGGGAGGCCAACAGGATG +
Preference number: 6 (lower is better)
Translates to: MARMTSSICLRR*LRTSSREANRM
Trigger: CATCCTGTTGGCCTCCCGGGAGCTGGTCCGCAGCAAGCGTCTTAGACAGATGCTAGAGGTCATCCTAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 72 bp GCTGCCCCAAACCTCACCTCTGCCTGGAAAATTCCCTaGCCTCTCACCTCAGTGGCAGTGCTGCCTCACTTC +
Preference number: 6 (lower is better)
Translates to: AAPNLTSAWKIP*PLTSVAVLPHF
Trigger: GAAGTGAGGCAGCACTGCCACTGAGGTGAGAGGCAAGGGAATTTTCCAGGCAGAGGTGAGGTTTGGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CAA 90 bp AAGTTGCCTATGGCTAGGATGACCTCTAGCATCTGTCTAAGACGCTaGCTGCGGACCAGCTCCCGGGAGGCCAACAGGATGGCTTCCACT +
Preference number: 6 (lower is better)
Translates to: KLPMARMTSSICLRR*LRTSSREANRMAST
Trigger: AGTGGAAGCCATCCTGTTGGCCTCCCGGGAGCTGGTCCGCAGCAAGCGTCTTAGACAGATGCTAGAGGTCATCCTAGCCATAGGCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 90 bp GGACAGAGCAGGAGGAGAGGGCTGAGTTCCCAACAGGTGTGGCCTTaGCATCTTTACTCCTGTCGCCTCCACTACCTAGAATGCCCCATC +
Preference number: 6 (lower is better)
Translates to: GQSRRRGLSSQQVWP*HLYSCRLHYLECPI
Trigger: GATGGGGCATTCTAGGTAGTGGAGGCGACAGGAGTAAAGATGCAAAGGCCACACCTGTTGGGAACTCAGCCCTCTCCTCCTGCTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS GCA 72 bp ATCCACCAGCTCTGCAAAGCGGATGTTGAGCTCCTCTaGGTTCGGGATGGGGCTGGAGAACTCCATGAACTG +
Preference number: 6 (lower is better)
Translates to: IHQLCKADVELL*VRDGAGELHEL
Trigger: CAGTTCATGGAGTTCTCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGAGCTGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS GCA 72 bp AGGAGCTGCTCCAGCATGTCCTTAGCAAGGTCCTCCTaGTCATCCATCTTCAAGATGGCCTGCCGGATCTCC +
Preference number: 6 (lower is better)
Translates to: RSCSSMSLARSS*SSIFKMACRIS
Trigger: GGAGATCCGGCAGGCCATCTTGAAGATGGATGAGCAGGAGGACCTTGCTAAGGACATGCTGGAGCAGCTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000496787.1
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS GCA 72 bp TGGCCAGAGGGGTCAGAGAGGGCACCTTCTTCTTGCTaGAGTAGATCTGCCATTTCTTCTCAGGGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: WPEGSERAPSSC*SRSAISSQGAV
Trigger: CACTGCCCCCTGAGAAGAAATGGCAGATCTACTGCAGCAAGAAGAAGGTGCCCTCTCTGACCCCTCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405961.3
ENST00000475489.5
CDS GCA 72 bp CAGATACTGCCCTGTTTGTTCTGCAGCCGCGGGAAATaGTTAGGGGCTGAGATCATGCTGCTCCATGGCCTG +
Preference number: 6 (lower is better)
Translates to: QILPCLFCSRGK*LGAEIMLLHGL
Trigger: CAGGCCATGGAGCAGCATGATCTCAGCCCCTAAGCATTTCCCGCGGCTGCAGAACAAACAGGGCAGTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 72 bp ATGAGTGAGGTGTGGATGCGGCTCTCACAGGTGGCGTaGTCCATGCTCCGGAGGAAATTTAGCAGACAGGTC +
Preference number: 6 (lower is better)
Translates to: MSEVWMRLSQVA*SMLRRKFSRQV
Trigger: GACCTGTCTGCTAAATTTCCTCCGGAGCATGGACCACGCCACCTGTGAGAGCCGCATCCACACCTCACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000632657.1
ENST00000633794.1
CDS CAA 72 bp CCAGACACCACTGCTGCCCTGAACAATTTGACTGACTaGTACTGTGAGCCTCAGGCAGGGCTGGGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: PDTTAALNNLTD*YCEPQAGLGER
Trigger: TCTCTCCCCCAGCCCTGCCTGAGGCTCACAGTACAAGTCAGTCAAATTGTTCAGGGCAGCAGTGGTGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405961.3
CDS CAA 90 bp CAGTGGAGCCCAGCTCTTTCTGCAACCAACAAGTCAAGTGGACAGTaGAGGTGTGGGTTCCCTAATCCTCCTCTTACCCGCCCCGCAAGA +
Preference number: 6 (lower is better)
Translates to: QWSPALSATNKSSGQ*RCGFPNPPLTRPAR
Trigger: TCTTGCGGGGCGGGTAAGAGGAGGATTAGGGAACCCACACCTCAACTGTCCACTTGACTTGTTGGTTGCAGAAAGAGCTGGGCTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496787.1
ENST00000631498.1
CDS TCA 72 bp GATCCAATTCATCCACCAGCTCTGCAAAGCGGATGTTaGGCTCCTCTGCGTTCGGGATGGGGCTGGAGAACT +
Preference number: 6 (lower is better)
Translates to: DPIHPPALQSGC*APLRSGWGWRT
Trigger: AGTTCTCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAATTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS GCA 72 bp GCTGTGCTGTTAGCGCAGATACTGCCCTGTTTGTTCTaGAGCCGCGGGAAATGCTTAGGGGCTGAGATCATG +
Preference number: 6 (lower is better)
Translates to: AVLLAQILPCLF*SRGKCLGAEIM
Trigger: CATGATCTCAGCCCCTAAGCATTTCCCGCGGCTGCAGAACAAACAGGGCAGTATCTGCGCTAACAGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 72 bp GCTTCCACTTTGGGCTTTGCCTCAGCCAGCCGCTCCTaGAATTTCTTCTTGAAGAAGAGGGCTTGCAGTCGC +
Preference number: 6 (lower is better)
Translates to: ASTLGFASASRS*NFFLKKRACSR
Trigger: GCGACTGCAAGCCCTCTTCTTCAAGAAGAAATTCCAGGAGCGGCTGGCTGAGGCAAAGCCCAAAGTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 72 bp AGATCCAATTCATCCACCAGCTCTGCAAAGCGGATGTaGAGCTCCTCTGCGTTCGGGATGGGGCTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: RSNSSTSSAKRM*SSSAFGMGLEN
Trigger: GTTCTCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAATTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp ACAGAAGCTGTGCTGTTAGCGCAGATACTGCCCTGTTaGTTCTGCAGCCGCGGGAAATGCTTAGGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: TEAVLLAQILPC*FCSRGKCLGAE
Trigger: CTCAGCCCCTAAGCATTTCCCGCGGCTGCAGAACAAACAGGGCAGTATCTGCGCTAACAGCACAGCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp AGCATCTCTCCCAGGGTAGGTGTTCTGACCGTGAGCTaGCTGGCACAGCAAACCCACTTTGTACATCCACAT +
Preference number: 6 (lower is better)
Translates to: SISPRVGVLTVS*LAQQTHFVHPH
Trigger: ATGTGGATGTACAAAGTGGGTTTGCTGTGCCAGGCAGCTCACGGTCAGAACACCTACCCTGGGAGAGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491083.2
CDS GCA 72 bp TGGGAGGTCCCTCTTGCACAACTTCAGGGGCCGCCTTaGATGGTTATCTTTGTGAATTGTGTCGTGCCTACC +
Preference number: 6 (lower is better)
Translates to: WEVPLAQLQGPP*MVIFVNCVVPT
Trigger: GGTAGGCACGACACAATTCACAAAGATAACCATGCAAGGCGGCCCCTGAAGTTGTGCAAGAGGGACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 72 bp CGATGTAATAGTCAGGCCAGCTGGTTGCCAGCTTGTTaGGGTCCTCCTGCTCCTTCTTCTTGCTGCAGTAGA +
Preference number: 6 (lower is better)
Translates to: RCNSQASWLPAC*GPPAPSSCCSR
Trigger: TCTACTGCAGCAAGAAGAAGGAGCAGGAGGACCCCAACAAGCTGGCAACCAGCTGGCCTGACTATTACATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS CCA 72 bp CACTCTTGGTGTCGATGTGGACCATGTCAAACCTCCTaGCTAGCTCCAGGTCATCCTCATTCCGCACCATCT +
Preference number: 6 (lower is better)
Translates to: HSWCRCGPCQTS*LAPGHPHSAPS
Trigger: AGATGGTGCGGAATGAGGATGACCTGGAGCTAGCCAGGAGGTTTGACATGGTCCACATCGACACCAAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS CCA 72 bp GCAGAAGGGAGGAGATCAAGTCCAATTAAGCCCCACTaGAGCTCAGCATACCCCTTTCTAGGGAGGGCCATA +
Preference number: 6 (lower is better)
Translates to: AEGRRSSPIKPH*SSAYPFLGRAI
Trigger: TATGGCCCTCCCTAGAAAGGGGTATGCTGAGCTCCAGTGGGGCTTAATTGGACTTGATCTCCTCCCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475489.5
CDS CAA 72 bp TGTCTAGTGTGCTGTTCTTCCTCTGGGAGGTCCCTCTaGCACAACTTCAGGGGCCGCCTTGCATGGTTATCT +
Preference number: 6 (lower is better)
Translates to: CLVCCSSSGRSL*HNFRGRLAWLS
Trigger: AGATAACCATGCAAGGCGGCCCCTGAAGTTGTGCAAGAGGGACCTCCCAGAGGAAGAACAGCACACTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CAA 72 bp AGGAGGAGAGGGCTGAGTTCCCAACAGGTGTGGCCTTaGCATCTTTACTCCTGTCGCCTCCACTACCTAGAA +
Preference number: 6 (lower is better)
Translates to: RRRGLSSQQVWP*HLYSCRLHYLE
Trigger: TTCTAGGTAGTGGAGGCGACAGGAGTAAAGATGCAAAGGCCACACCTGTTGGGAACTCAGCCCTCTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CAA 90 bp TTGTCAGTGAGATCCAATTCATCCACCAGCTCTGCAAAGCGGATGTaGAGCTCCTCTGCGTTCGGGATGGGGCTGGAGAACTCCATGAAC +
Preference number: 6 (lower is better)
Translates to: LSVRSNSSTSSAKRM*SSSAFGMGLENSMN
Trigger: GTTCATGGAGTTCTCCAGCCCCATCCCGAACGCAGAGGAGCTCAACATCCGCTTTGCAGAGCTGGTGGATGAATTGGATCTCACTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000405961.3
ENST00000475489.5
ENST00000491083.2
ENST00000494405.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 90 bp GTTCTTCCTCTGGGAGGTCCCTCTTGCACAACTTCAGGGGCCGCCTaGCATGGTTATCTTTGTGAATTGTGTCGTGCCTACCCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: VLPLGGPSCTTSGAA*HGYLCELCRAYPVC
Trigger: ACACACAGGGTAGGCACGACACAATTCACAAAGATAACCATGCAAGGCGGCCCCTGAAGTTGTGCAAGAGGGACCTCCCAGAGGAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS TCA 72 bp ACAGGGCTGGCATGTAATAAACATCAGGTGAATGCATaGGCATGCCAAGGCAGCAAGAGCCACCCCATGCCA +
Preference number: 6 (lower is better)
Translates to: TGLACNKHQVNA*ACQGSKSHPMP
Trigger: TGGCATGGGGTGGCTCTTGCTGCCTTGGCATGCTCATGCATTCACCTGATGTTTATTACATGCCAGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405961.3
ENST00000475489.5
CDS TCA 72 bp CAGCTCTTTCTGCAACCAACAAGTCAAGTGGACAGTTaGGGTGTGGGTTCCCTAATCCTCCTCTTACCCGCC +
Preference number: 6 (lower is better)
Translates to: QLFLQPTSQVDS*GVGSLILLLPA
Trigger: GGCGGGTAAGAGGAGGATTAGGGAACCCACACCTCAACTGTCCACTTGACTTGTTGGTTGCAGAAAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496787.1
ENST00000631498.1
CDS TCA 72 bp CTTCATTCTCAGAACACAGAATCGCTCTCAGTCTTCTaGCAGCGCCTCAGCTCCCACACAGCTGTCCCAATC +
Preference number: 6 (lower is better)
Translates to: LHSQNTESLSVF*QRLSSHTAVPI
Trigger: GATTGGGACAGCTGTGTGGGAGCTGAGGCGCTGTCAGAAGACTGAGAGCGATTCTGTGTTCTGAGAATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp CCACTGCTGCCAGGGGTCTATTTGATTACCTCCCTCTaGTACATTTCTTCTTTCTCTTTGGGGGCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: PLLPGVYLITSL*YISSFSLGALS
Trigger: GGAGAGGGCCCCCAAAGAGAAAGAAGAAATGTAGCAGAGGGAGGTAATCAAATAGACCCCTGGCAGCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp GCAAGGTCCTCCTGCTCATCCATCTTCAAGATGGCCTaGCGGATCTCCTCGTTAGAAAGCTTCAACCTAAGG +
Preference number: 6 (lower is better)
Translates to: ARSSCSSIFKMA*RISSLESFNLR
Trigger: CCTTAGGTTGAAGCTTTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATGAGCAGGAGGACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp CTCAGCCTTTGGGGCTTGGTCTACATGGTTGAGCAGTaGTTCAGTGCTGCTTTATCATCGTGCTCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: LSLWGLVYMVEQ*FSAALSSCSSC
Trigger: ACAGCTGGAGCACGATGATAAAGCAGCACTGAAGCACTGCTCAACCATGTAGACCAAGCCCCAAAGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS GCA 72 bp TTGCATCTTTACTCCTGTCGCCTCCACTACCTAGAATaGCCCATCTGCTCTCTCCACCCAATCAGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: LHLYSCRLHYLE*PICSLHPIRSV
Trigger: GACAGACCTGATTGGGTGGAGAGAGCAGATGGGGCATTCTAGGTAGTGGAGGCGACAGGAGTAAAGATGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CAA 72 bp CCAGCTCTTTCTGCAACCAACAAGTCAAGTGGACAGTaGAGGTGTGGGTTCCCTAATCCTCCTCTTACCCGC +
Preference number: 6 (lower is better)
Translates to: PALSATNKSSGQ*RCGFPNPPLTR
Trigger: GCGGGTAAGAGGAGGATTAGGGAACCCACACCTCAACTGTCCACTTGACTTGTTGGTTGCAGAAAGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496787.1
ENST00000631498.1
CDS CAA 90 bp TGCCTCAGCCAGCCGCTCCTGGAATTTCTTCTTGAAGAAGAGGGCTaGCAGTCGCTGCTGGTAGTGGTCAATCCTGCTCATTTCATAGAG +
Preference number: 6 (lower is better)
Translates to: CLSQPLLEFLLEEEG*QSLLVVVNPAHFIE
Trigger: CTCTATGAAATGAGCAGGATTGACCACTACCAGCAGCGACTGCAAGCCCTCTTCTTCAAGAAGAAATTCCAGGAGCGGCTGGCTGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000631498.1
ENST00000633794.1
CDS CAA 90 bp GGTAAGACAGTAGACCTAGAAGCCTTCTCCTCATTCCAGGAGACATaGACCTCCACTGCTGCCAGGGGTCTATTTGATTACCTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: GKTVDLEAFSSFQET*TSTAARGLFDYLPL
Trigger: CAGAGGGAGGTAATCAAATAGACCCCTGGCAGCAGTGGAGGTCAATGTCTCCTGGAATGAGGAGAAGGCTTCTAGGTCTACTGTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CAA 90 bp TCTTGCACAACTTCAGGGGCCGCCTTGCATGGTTATCTTTGTGAATaGTGTCGTGCCTACCCTGTGTGTCCTTACAGGAAAGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SCTTSGAALHGYLCE*CRAYPVCPYRKGSP
Trigger: AGGAGAGCCTTTCCTGTAAGGACACACAGGGTAGGCACGACACAATTCACAAAGATAACCATGCAAGGCGGCCCCTGAAGTTGTGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS TCA 72 bp CACCTAGAACAGGGCTGGCATGTAATAAACATCAGGTaGATGCATGAGCATGCCAAGGCAGCAAGAGCCACC +
Preference number: 6 (lower is better)
Translates to: HLEQGWHVINIR*MHEHAKAARAT
Trigger: GGTGGCTCTTGCTGCCTTGGCATGCTCATGCATTCACCTGATGTTTATTACATGCCAGCCCTGTTCTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405961.3
ENST00000475489.5
CDS TCA 72 bp CACAACTTCAGGGGCCGCCTTGCATGGTTATCTTTGTaGATTGTGTCGTGCCTACCCTGTGTGTCCTTACAG +
Preference number: 6 (lower is better)
Translates to: HNFRGRLAWLSL*IVSCLPCVSLQ
Trigger: CTGTAAGGACACACAGGGTAGGCACGACACAATTCACAAAGATAACCATGCAAGGCGGCCCCTGAAGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp GCAAGGTCCTCCTGCTCATCCATCTTCAAGATGGCCTaGCGGATCTCCTCGTTAGAAAGCTTCAACTTGGAA +
Preference number: 6 (lower is better)
Translates to: ARSSCSSIFKMA*RISSLESFNLE
Trigger: TTCCAAGTTGAAGCTTTCTAACGAGGAGATCCGGCAGGCCATCTTGAAGATGGATGAGCAGGAGGACCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000496787.1
ENST00000538976.5
ENST00000633794.1
CDS GCA 72 bp TACTCCTGTCGCCTCCACTACCTAGAATGCCCCATCTaGTCTCTCCACCCAATCAGGTCTGTCCAATTTACT +
Preference number: 6 (lower is better)
Translates to: YSCRLHYLECPI*SLHPIRSVQFT
Trigger: AGTAAATTGGACAGACCTGATTGGGTGGAGAGAGCAGATGGGGCATTCTAGGTAGTGGAGGCGACAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS GCA 72 bp GCTCACAAGCTCCATGTGTTCTTTCCGGAACTTCTCTaGCTGGTCTCGCCACTGTTTCACTTCATTCTCGTT +
Preference number: 6 (lower is better)
Translates to: AHKLHVFFPELL*LVSPLFHFILV
Trigger: AACGAGAATGAAGTGAAACAGTGGCGAGACCAGGCAGAGAAGTTCCGGAAAGAACACATGGAGCTTGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS GCA 72 bp GAAATACCTGCATGTCATCAATCTCATTCCATACGGTaGCAGGGACACGCTCCTCATTCAGCTTCACCCAGT +
Preference number: 6 (lower is better)
Translates to: EIPACHQSHSIR*QGHAPHSASPS
Trigger: ACTGGGTGAAGCTGAATGAGGAGCGTGTCCCTGGCACCGTATGGAATGAGATTGATGACATGCAGGTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000538976.5
ENST00000633794.1
CDS CCA 72 bp GAAAGCTTCAACTTGGAAAGAAGGATGATGCAGTTTTaGGCCCTCCGGCCATCAATGACCGACAGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: ESFNLERRMMQF*ALRPSMTDSSL
Trigger: CAAAGAGCTGTCGGTCATTGATGGCCGGAGGGCCCAAAACTGCATCATCCTTCTTTCCAAGTTGAAGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000496787.1
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp ACTTCAGGGGCCGCCTTGCATGGTTATCTTTGTGAATaGTGTCGTGCCTACCCTGTGTGTCCTTACAGGAAA +
Preference number: 6 (lower is better)
Translates to: TSGAALHGYLCE*CRAYPVCPYRK
Trigger: TTTCCTGTAAGGACACACAGGGTAGGCACGACACAATTCACAAAGATAACCATGCAAGGCGGCCCCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp GATTATCGGCAAGCCACTAAGAGGGCAATTTCCTGCTaGCTTCATTCTCAGAACACAGAATCGCTCTCAGTC +
Preference number: 6 (lower is better)
Translates to: DYRQATKRAISC*LHSQNTESLSV
Trigger: GACTGAGAGCGATTCTGTGTTCTGAGAATGAAGGCAGCAGGAAATTGCCCTCTTAGTGGCTTGCCGATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS GCA 72 bp CAGGATTATCGGCAAGCCACTAAGAGGGCAATTTCCTaGTGCCTTCATTCTCAGAACACAGAATCGCTCTCA +
Preference number: 6 (lower is better)
Translates to: QDYRQATKRAIS*CLHSQNTESLS
Trigger: TGAGAGCGATTCTGTGTTCTGAGAATGAAGGCAGCAGGAAATTGCCCTCTTAGTGGCTTGCCGATAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS CCA 72 bp ACAAGCTCCATGTGTTCTTTCCGGAACTTCTCTGCCTaGTCTCGCCACTGTTTCACTTCATTCTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: TSSMCSFRNFSA*SRHCFTSFSLM
Trigger: CATCAACGAGAATGAAGTGAAACAGTGGCGAGACCAGGCAGAGAAGTTCCGGAAAGAACACATGGAGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp TTCTCGTTGATGAGCATGTTGACGATGTTCTTGACATaGAAGTTCTCCAAGGGAGCCAGGTCAGGGTCCACA +
Preference number: 6 (lower is better)
Translates to: FSLMSMLTMFLT*KFSKGARSGST
Trigger: TGTGGACCCTGACCTGGCTCCCTTGGAGAACTTCAATGTCAAGAACATCGTCAACATGCTCATCAACGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp TTGATTACCTCCCTCTGCTACATTTCTTCTTTCTCTTaGGGGGCCCTCTCCCATACCACCCTGTATGAATGG +
Preference number: 6 (lower is better)
Translates to: LITSLCYISSFS*GALSHTTLYEW
Trigger: CCATTCATACAGGGTGGTATGGGAGAGGGCCCCCAAAGAGAAAGAAGAAATGTAGCAGAGGGAGGTAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS TCA 72 bp GGGGCGTCAGCAGACAGATGCCCTAGGTCCTCATTGTaGTCATGTTCGAGGTTTATCTCAAACTTTCATCTT +
Preference number: 6 (lower is better)
Translates to: GASADRCPRSSL*SCSRFISNFHL
Trigger: AAGATGAAAGTTTGAGATAAACCTCGAACATGATCACAATGAGGACCTAGGGCATCTGTCTGCTGACGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405961.3
CDS TCA 72 bp GGAAATTTAGCAGACAGGTCAAGCCCTCCAGCTCAATaGAGCGGGTCACAAACCTACAAATCAGAGCCATTA +
Preference number: 6 (lower is better)
Translates to: GNLADRSSPPAQ*SGSQTYKSEPL
Trigger: TAATGGCTCTGATTTGTAGGTTTGTGACCCGCTTCATTGAGCTGGAGGGCTTGACCTGTCTGCTAAATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS GCA 72 bp ATGGTTGAGCAGTGCTTCAGTGCTGCTTTATCATCGTaGTCCAGCTGTTTACAGCTCATATGTATTCCCTGC +
Preference number: 6 (lower is better)
Translates to: MVEQCFSAALSS*SSCLQLICIPC
Trigger: GCAGGGAATACATATGAGCTGTAAACAGCTGGAGCACGATGATAAAGCAGCACTGAAGCACTGCTCAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CAA 72 bp TGTTTGTCCAGGATGGCATTTTCATGTTGCCGGAGCTaGTCAATCACAGGCTGTATACCCAGCATCAGGAAT +
Preference number: 6 (lower is better)
Translates to: CLSRMAFSCCRS*SITGCIPSIRN
Trigger: ATTCCTGATGCTGGGTATACAGCCTGTGATTGACAAGCTCCGGCAACATGAAAATGCCATCCTGGACAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS CAA 72 bp ACTTCATTCTCGTTGATGAGCATGTTGACGATGTTCTaGACATTGAAGTTCTCCAAGGGAGCCAGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: TSFSLMSMLTMF*TLKFSKGARSG
Trigger: CCCTGACCTGGCTCCCTTGGAGAACTTCAATGTCAAGAACATCGTCAACATGCTCATCAACGAGAATGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS TCA 72 bp GAACTCGATCTGGAAGCTCCAGAAAGTTGTGTTTACTaGGGCAGAGAAAAGCAAGTGCCCTTGAATTTGCTC +
Preference number: 6 (lower is better)
Translates to: ELDLEAPESCVY*GREKQVPLNLL
Trigger: GAGCAAATTCAAGGGCACTTGCTTTTCTCTGCCTCAGTAAACACAACTTTCTGGAGCTTCCAGATCGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631498.1
CDS TCA 72 bp ATCTCAGCAATTGCACTCAATTCAGTAATTCTTGACTaGGCCCCTATCATGAGCCAGGTGTTGAGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: ISAIALNSVILD*APIMSQVLRLE
Trigger: CTCCAACCTCAACACCTGGCTCATGATAGGGGCTCAGTCAAGAATTACTGAATTGAGTGCAATTGCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CAA 90 bp AAGTCTAAATGTTTGTCCAGGATGGCATTTTCATGTTGCCGGAGCTaGTCAATCACAGGCTGTATACCCAGCATCAGGAATTCATACCGT +
Preference number: 6 (lower is better)
Translates to: KSKCLSRMAFSCCRS*SITGCIPSIRNSYR
Trigger: ACGGTATGAATTCCTGATGCTGGGTATACAGCCTGTGATTGACAAGCTCCGGCAACATGAAAATGCCATCCTGGACAAACATTTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274867.9
ENST00000398904.6
ENST00000491083.2
ENST00000538976.5
ENST00000633794.1
CDS TCA 72 bp TTTCCAGGTTCCTGCAACTCTGAAATGGTGTATATTTaGATCCTCCAATGTTACAAGGTCAGTCTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: FPGSCNSEMVYI*ILQCYKVSLAQ
Trigger: CTGAGCCAGACTGACCTTGTAACATTGGAGGATTCAAATATACACCATTTCAGAGTTGCAGGAACCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475489.5
CDS TCA 72 bp GCCATCAAACTCTTTAGTCCTTTGTATACATTGTCCTaGTCTTTACCAAAACCTAGATGCTGGCCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: AIKLFSPLYTLS*SLPKPRCWPKL
Trigger: GAGCTTGGGCCAGCATCTAGGTTTTGGTAAAGATCAGGACAATGTATACAAAGGACTAAAGAGTTTGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491083.2
CDS TCA 72 bp TGTGCTAAGACACTTCATATTTACTGTTCATCTCACTaGTACTTCTCTGGGCAGGTCAGGGAAAGAAAAGAG +
Preference number: 6 (lower is better)
Translates to: CAKTLHIYCSSH*YFSGQVRERKE
Trigger: CTCTTTTCTTTCCCTGACCTGCCCAGAGAAGTATCAGTGAGATGAACAGTAAATATGAAGTGTCTTAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632657.1
CDS CAA 72 bp CAAACTTTCATCTTCTCTTTTTACAGACGAAGAAACTaGAGGCTCAGAAGGACGCTAGGTATGAACCTAGGA +
Preference number: 6 (lower is better)
Translates to: QTFIFSFYRRRN*RLRRTLGMNLG
Trigger: TCCTAGGTTCATACCTAGCGTCCTTCTGAGCCTCAAGTTTCTTCGTCTGTAAAAAGAGAAGATGAAAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405961.3
CDS CAA 90 bp GGTTTATCTCAAACTTTCATCTTCTCTTTTTACAGACGAAGAAACTaGAGGCTCAGAAGGACGCTAGGTATGAACCTAGGAACTCAAACC +
Preference number: 6 (lower is better)
Translates to: GLSQTFIFSFYRRRN*RLRRTLGMNLGTQT
Trigger: GGTTTGAGTTCCTAGGTTCATACCTAGCGTCCTTCTGAGCCTCAAGTTTCTTCGTCTGTAAAAAGAGAAGATGAAAGTTTGAGATAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405961.3