RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAAM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100592

Ensembl transcript IDs: ENST00000360909.8, ENST00000395125.1, ENST00000553307.5, ENST00000553472.1, ENST00000553966.5, ENST00000554459.5, ENST00000555651.1, ENST00000556135.1, ENST00000556596.1, ENST00000557029.5, ENST00000557327.1, ENST00000557628.5

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAATGGCAAAGGAGGCCCACCAGGATGGCCATATCAAAGGAGGATaGTTAAAAGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTT +
Preference number: 1 (lower is better)
Translates to: EMAKEAHQDGHIKGG*LKGARGTATQTCSF
Trigger: AAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCTTTTAATCATCCTCCTTTGATATGGCCATCCTGGTGGGCCTCCTTTGCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CCA 90 bp AGCCAAGTCTCTATCTGCACCTTTAACATGGTGTTATTGCAGACCTaGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATTT +
Preference number: 1 (lower is better)
Translates to: SQVSICTFNMVLLQT*VNSGLGECNLCFVF
Trigger: AAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR GCA 90 bp TCCAATCTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTaGACCTTTAACATGGTGTTATTGCAGACCTGGGTTAACTCGGGA +
Preference number: 1 (lower is better)
Translates to: SNLPHLQAFLSQVSI*TFNMVLLQTWVNSG
Trigger: TCCCGAGTTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAGATTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR TCA 90 bp TGTATCCCCACACCAATGTCAGAAATTCAAAGCTGGTCCTATTACTaGTGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATT +
Preference number: 1 (lower is better)
Translates to: CIPTPMSEIQSWSYY*CDTSTSQCQLSKII
Trigger: AATGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACCAGCTTTGAATTTCTGACATTGGTGTGGGGATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGGGTTAACTCGGGATTaGGGGAGTGCAACCTCTGCT +
Preference number: 2 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVGLTRD*GSATSA
Trigger: AGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 90 bp GCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGGTGTTATaGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGC +
Preference number: 2 (lower is better)
Translates to: AFLSQVSICTFNMVL*QTWVNSGLGECNLC
Trigger: GCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR TCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAATAGTATTGTGCTTCTaGACAGTCATGGCGTTCGGG +
Preference number: 2 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVIVLCF*TVMAFG
Trigger: CCCGAACGCCATGACTGTTCAGAAGCACAATACTAT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAGCTTCTGAACAGTCATaGCGTTCGGGGAAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIASEQS*RSGKEN
Trigger: ATTTTCTTTCCCCGAACGCCATGACTGTTCAGAAGC...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 90 bp CAAAGGAGGATGATTAAAAGGGGCAAGAGGGACAGCTACACAAACTaGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAAC +
Preference number: 2 (lower is better)
Translates to: QRRMIKRGKRDSYTN*LLYVTFPPPVYSLN
Trigger: GTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCTTTTAATCATCCTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCCACACTCAATGTGAATaGATACACGAAAGGTTTTGG +
Preference number: 2 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVHTQCE*IHERFW
Trigger: CCAAAACCTTTCGTGTATGCATTCACATTGAGTGTG...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCAGCCAAGTCTCTATCTaGACCTTTAACATGGTGTTA +
Preference number: 2 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVSQVSI*TFNMVL
Trigger: TAACACCATGTTAAAGGTGCAGATAGAGACTTGGCT...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCAAAAATTGCCACTGTTTaGATTGCAAGGCAGTGTAAT +
Preference number: 2 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPKIATV*IARQCN
Trigger: ATTACACTGCCTTGCAATCCAAACAGTGGCAATTTT...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR TCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGTCCTATTACTGATGTaGTACATCAACATCACAATG +
Preference number: 2 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVVLLLM*YINITM
Trigger: CATTGTGATGTTGATGTATCACATCAGTAATAGGAC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR GCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGTCGGGATTGGGGGAGTaGAACCTCTGCTTTGTATTT +
Preference number: 2 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKSGLGE*NLCFVF
Trigger: AAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGA...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCAAAATTGCCACTGTTTaGATTGCAAGGCAGTGTAAT +
Preference number: 2 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVKIATV*IARQCN
Trigger: ATTACACTGCCTTGCAATCCAAACAGTGGCAATTTT...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCGTGTTATTGCAGACCTaGGTTAACTCGGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAVLLQT*VNSGLG
Trigger: CCCCAATCCCGAGTTAACCCAGGTCTGCAATAACAC...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 90 bp TGCACCTTTAACATGGTGTTATTGCAGACCTGGGTTAACTCGGGATaGGGGGAGTGCAACCTCTGCTTTGTATTTATGACTGTTTTATTT +
Preference number: 2 (lower is better)
Translates to: CTFNMVLLQTWVNSG*GECNLCFVFMTVLF
Trigger: AAATAAAACAGTCATAAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR GCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTGGGGAGTGCAACCTCTaGTTTGTATTTATGACTGTT +
Preference number: 2 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCGECNL*FVFMTV
Trigger: AACAGTCATAAATACAAAGCAGAGGTTGCACTCCCC...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAGCTTCTGAACAGTCATaGCGTTCGGGGAAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIASEQS*RSGKEN
Trigger: ATTTTCTTTCCCCGAACGCCATGACTGTTCAGAAGC...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR TCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGAGCTGGTCCTATTACTaGTGTGATACATCAACATCA +
Preference number: 2 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKSWSYY*CDTSTS
Trigger: TGATGTTGATGTATCACATCAGTAATAGGACCAGCT...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR TCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCATACAGTTCCAAAACTaGGCCAGACCAAATTTATCC +
Preference number: 2 (lower is better)
Translates to: FSTMAHGITCTQFSGKETIQFQN*ARPNLS
Trigger: GGATAAATTTGGTCTGGCTCAGTTTTGGAACTGTAT...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR GCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCTTAACATGGTGTTATTaGAGACCTGGGTTAACTCGG +
Preference number: 2 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQALTWCY*RPGLTR
Trigger: CCGAGTTAACCCAGGTCTGCAATAACACCATGTTAA...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR GCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTAGCCAAGTCTCTATCTaGACCTTTAACATGGTGTTA +
Preference number: 2 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCSQVSI*TFNMVL
Trigger: TAACACCATGTTAAAGGTGCAGATAGAGACTTGGCT...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGTTCAACAATGGCACATaGAATTACCTGCACACAGTT +
Preference number: 2 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKFNNGT*NYLHTV
Trigger: AACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAA...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 90 bp ACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCTTTTaGAGCCAAGTCTCTATCTGCACCTTTAACATGGTGTTATTGCAG +
Preference number: 2 (lower is better)
Translates to: TKPSLYSNLPHLQAF*SQVSICTFNMVLLQ
Trigger: CTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAGAGCCACACTCAATGTaGATGCATACACGAAAGGTT +
Preference number: 2 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSEPHSM*MHTRKV
Trigger: AACCTTTCGTGTATGCATTCACATTGAGTGTGGCTC...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCGTACAGTGCACACATTaGTATTCTATTCATCCCTTA +
Preference number: 2 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAVQCTH*YSIHPL
Trigger: TAAGGGATGAATAGAATACCAATGTGTGCACTGTAC...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR GCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCACACACTCAATGTGAATaGATACACGAAAGGTTTTGG +
Preference number: 2 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSHTQCE*IHERFW
Trigger: CCAAAACCTTTCGTGTATGCATTCACATTGAGTGTG...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR TCA 72 bp AAGGAGGCCCACCAGGATGGCCATATCAAAGGAGGATaGTTAAAAGGGGCAAGAGGGACAGCTACACAAACT +
Preference number: 3 (lower is better)
Translates to: KEAHQDGHIKGG*LKGARGTATQT
Trigger: AGTTTGTGTAGCTGTCCCTCTTGCCCCTTTTAATCATCCTCCTTTGATATGGCCATCCTGGTGGGCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR GCA 72 bp GCCAAGTCTCTATCTGCACCTTTAACATGGTGTTATTaGAGACCTGGGTTAACTCGGGATTGGGGGAGTGCA +
Preference number: 3 (lower is better)
Translates to: AKSLSAPLTWCY*RPGLTRDWGSA
Trigger: TGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CCA 72 bp TCTATCTGCACCTTTAACATGGTGTTATTGCAGACCTaGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: SICTFNMVLLQT*VNSGLGECNLC
Trigger: GCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCATCTTCTGTTTTGCCTTaGAATCTAGGGAATGTCTCT +
Preference number: 3 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPSSVLP*NLGNVS
Trigger: AGAGACATTCCCTAGATTCAAAGGCAAAACAGAAGA...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCATGTACAGTGCACACATaGGTATTCTATTCATCCCTT +
Preference number: 3 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPCTVHT*VFYSSL
Trigger: AAGGGATGAATAGAATACCAATGTGTGCACTGTACA...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR GCA 72 bp CCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTaGACCTTTAACATGGTGTTATTGCAGACCTGGGTT +
Preference number: 3 (lower is better)
Translates to: PHLQAFLSQVSI*TFNMVLLQTWV
Trigger: AACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAGCATCTCTGCTGATGTaGACATTTTGTGCATTCTTT +
Preference number: 3 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIASLLM*TFCAFF
Trigger: AAAGAATGCACAAAATGTCAACATCAGCAGAGATGC...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCCATCTCCAAGCCTTTTaGAGCCAAGTCTCTATCTGC +
Preference number: 3 (lower is better)
Translates to: FSTMAHGITCTQFSGKETHLQAF*SQVSIC
Trigger: GCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATG...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGGCATCTCTGCTGATGTaGACATTTTGTGCATTCTTT +
Preference number: 3 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMASLLM*TFCAFF
Trigger: AAAGAATGCACAAAATGTCAACATCAGCAGAGATGC...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR GCA 72 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTaGAACCTCTGCTTTGTATTTATGACTGTTTTATTT +
Preference number: 3 (lower is better)
Translates to: LLQTWVNSGLGE*NLCFVFMTVLF
Trigger: AAATAAAACAGTCATAAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTGTAAAACCACAGCTCTaGACAACTCTTAGAGCACTA +
Preference number: 3 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCVKPQL*TTLRAL
Trigger: TAGTGCTCTAAGAGTTGTCAAGAGCTGTGGTTTTAC...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATTGCCACTGTTTGGATaGCAAGGCAGTGTAATGAAA +
Preference number: 3 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIILPLFG*QGSVMK
Trigger: TTTCATTACACTGCCTTGCAATCCAAACAGTGGCAA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGTCTTCTGTTTTGCCTTaGAATCTAGGGAATGTCTCT +
Preference number: 3 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKSSVLP*NLGNVS
Trigger: AGAGACATTCCCTAGATTCAAAGGCAAAACAGAAGA...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTCTTGGCAGAGATAACTaGATGAAATCAGGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCLGRDN*MKSGEK
Trigger: TTTTTCCCCTGATTTCATCAAGTTATCTCTGCCAAG...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACTTGCCACTGTTTGGATaGCAAGGCAGTGTAATGAAA +
Preference number: 3 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNLPLFG*QGSVMK
Trigger: TTTCATTACACTGCCTTGCAATCCAAACAGTGGCAA...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR TCA 72 bp ACACCAATGTCAGAAATTCAAAGCTGGTCCTATTACTaGTGTGATACATCAACATCACAATGTCAGCTATCA +
Preference number: 3 (lower is better)
Translates to: TPMSEIQSWSYY*CDTSTSQCQLS
Trigger: TGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACCAGCTTTGAATTTCTGACATTGGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAAGACGGCCCTCCTGCTaGGCTCATGGAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVRRPSC*AHGAVL
Trigger: CAGCACAGCTCCATGAGCTCAGCAGGAGGGCCGTCT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCAAAGGGCCCTCCTGGTaGTCCAGGCGAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVKGPSW*SRRGST
Trigger: GGTGGACCCTCGCCTGGAGCACCAGGAGGGCCCTTT...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGCAGCCCCTGCATGCTaGAAAGGCGGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVAAPAC*KGGSAL
Trigger: GAGTGCAGAGCCGCCTTTCCAGCATGCAGGGGCTGC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR CCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAAGGAAAGGGCCCTCCTaGTGCTCCAGGCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIRKGPS*CSRRGS
Trigger: GGACCCTCGCCTGGAGCACCAGGAGGGCCCTTTCCT...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGAGGGAGGGGAGGCGGTaGAGGGGGAAGCATCCCACC +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMREGRR*RGKHPT
Trigger: GGTGGGATGCTTCCCCCTCCACCGCCTCCCCTCCCT...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACTGGAAAGGCGGCTCTaGACTCTGGGTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPLERRL*TLGTMG
Trigger: TCCCATTGTACCCAGAGTGCAGAGCCGCCTTTCCAG...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR GCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCAAGGGGGCATGGGCAATaGTGGTTCCATGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPRGHGQ*WFHGLK
Trigger: CTTCAGACCATGGAACCAGCATTGCCCATGCCCCCT...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGGGCATGGGCAATGCTaGTTCCATGGTCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVGHGQC*FHGLKR
Trigger: GCGCTTCAGACCATGGAACCAGCATTGCCCATGCCC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATACCTCCACAGGGGGCATaGGCAATGCTGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIPPQGA*AMLVPW
Trigger: CCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGG...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTAGGGAGGGGAGGCGGTaGAGGGGGAAGCATCCCACC +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCREGRR*RGKHPT
Trigger: GGTGGGATGCTTCCCCCTCCACCGCCTCCCCTCCCT...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAGGGTCCACCTGGGATTaGAGCACAGACGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLGSTWD*STDGPP
Trigger: AGGAGGGCCGTCTGTGCTTCAATCCCAGGTGGACCC...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAAAACAACATCCAGGGAATTGACACTGGCTACATGTAGCACCACAGCCACAGGCGGCTCTGCACTCTaGGTACAATGGGATCCGGTT +
Preference number: 4 (lower is better)
Translates to: TKTTSRELTLATCSTTATGGSAL*VQWDPV
Trigger: AACCGGATCCCATTGTACCCAGAGTGCAGAGCCGCC...TGTGGCTGTGGTGCTACATGTAGCCAGTGTCAATTCCCTGGATGTTGTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAAGCGGGTCCTTTCGCTaGCATACTTCTGGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVSGSFR*HTSGSA
Trigger: TGCACTACCAGAAGTATGCCAGCGAAAGGACCCGCT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACTTATCTCCGGGCTGTaGGGGCTGAGACTTCTGATA +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPLISGL*GLRLLI
Trigger: TATCAGAAGTCTCAGCCCCCACAGCCCGGAGATAAG...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACTCTGTGTTTGTCTGTaGGGTCCAGTTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVLCVCL*GPVHPP
Trigger: TGGTGGATGAACTGGACCTCACAGACAAACACAGAG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTCATGGAGCTGTGCTGTaGGGTCCGCCACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCHGAVL*GPPPAA
Trigger: AGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATG...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGAGACGGCCCTCCTGCTaGGCTCATGGAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKRRPSC*AHGAVL
Trigger: CAGCACAGCTCCATGAGCTCAGCAGGAGGGCCGTCT...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAGCAATGCTGGTTCCATaGTCTGAAGCGCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVAMLVP*SEAQSC
Trigger: GCAACTTTGCGCTTCAGACCATGGAACCAGCATTGC...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAGTGTTATTGCAGACCTaGGTTAACTCGGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVVLLQT*VNSGLG
Trigger: CCCCAATCCCGAGTTAACCCAGGTCTGCAATAACAC...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 72 bp AGCCAAGTCTCTATCTGCACCTTTAACATGGTGTTATaGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SQVSICTFNMVL*QTWVNSGLGEC
Trigger: GCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCCACCAGGAGGTGGCATaGTTGCCCCTAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETHQEVA*LPLREE
Trigger: CTCCTCCCTTAGGGGCAATCATGCCACCTCCTGGTG...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCGAGCTCATGGAGCTGTaGTGTGAGGTCCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETELMEL*CEVRHL
Trigger: CAGGTGGCGGACCTCACAGCACAGCTCCATGAGCTC...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGCCTCCACAGGGGGCATaGGCAATGCTGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKPPQGA*AMLVPW
Trigger: CCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGG...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAAGCGGGTCCTTTCGCTaGCATACTTCTGGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSISGSFR*HTSGSA
Trigger: TGCACTACCAGAAGTATGCCAGCGAAAGGACCCGCT...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTACTCCTGCTGAGCTCATaGAGCTGTGCTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLLLLSS*SCAVRS
Trigger: GGACCTCACAGCACAGCTCCATGAGCTCAGCAGGAG...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGGGAGGCCCACCAGGATaGCCATATCAAAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMGGPPG*PYQRRM
Trigger: CATCCTCCTTTGATATGGCCATCCTGGTGGGCCTCC...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACCCAAGAGAGAAAAGTaGCTACTTACACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVPKREK*LLTPAP
Trigger: TGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAGCTGGTTCCATGGTCTaGAGCGCAAAGTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIAGSMV*SAKLLS
Trigger: TGATAGCAACTTTGCGCTTCAGACCATGGAACCAGC...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AAAACAACATCCAGGGAATTGACACTGGCTACATGTAGCACCACAGCCACAACACTCTGTGTTTGTCTGTaGGGTCCAGTTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: KTTSRELTLATCSTTATTLCVCL*GPVHPP
Trigger: TGGTGGATGAACTGGACCTCACAGACAAACACAGAG...TGTTGTGGCTGTGGTGCTACATGTAGCCAGTGTCAATTCCCTGGATGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR TCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCAGGGCATTTGTGGGCTaGGGAATGCTTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVRAFVG*GMLFFF
Trigger: GAAGAAGAAAAGCATTCCTCAGCCCACAAATGCCCT...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCAGAGCCACACTCAATGTaGATGCATACACGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPEPHSM*MHTRKV
Trigger: AACCTTTCGTGTATGCATTCACATTGAGTGTGGCTC...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACATATCAAAGGAGGATaGTTAAAAGGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVHIKGG*LKGARG
Trigger: CCCTCTTGCCCCTTTTAATCATCCTCCTTTGATATG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAGAGCTCATGGAGCTGTaGTGTGAGGTCCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIELMEL*CEVRHL
Trigger: CAGGTGGCGGACCTCACAGCACAGCTCCATGAGCTC...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATCGATAGAAGGATGTTaGAATTCTGAGCTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVSIEGC*NSELSD
Trigger: GTCGGAGAGCTCAGAATTGCAACATCCTTCTATCGA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAACCACCTCCAGCAACTaGTTGAGGGCACCACTCCTA +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLTTSSN*LRAPLL
Trigger: TAGGAGTGGTGCCCTCAAGCAGTTGCTGGAGGTGGT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTGGCGGCTCTGCACTCTaGGTACAATGGGATCCGGTT +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCGGSAL*VQWDPV
Trigger: AACCGGATCCCATTGTACCCAGAGTGCAGAGCCGCC...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGTTCCAACATGTCCTTaGGCAGATCTTCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVVPTCP*ADLPVR
Trigger: ACGAACAGGAAGATCTGCCCAAGGACATGTTGGAAC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACTGCTGTCAGTCATCTaGTTGGTAATACGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPLLSVI*LVIRLR
Trigger: TCGCAAACGTATTACCAACCAGATGACTGACAGCAG...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAGCTTCTGAACAGTCATaGCGTTCGGGGAAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVASEQS*RSGKEN
Trigger: ATTTTCTTTCCCCGAACGCCATGACTGTTCAGAAGC...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCATCTGCACCTTTAACATaGTGTTATTGCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPSAPLT*CYCRPG
Trigger: CCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGA...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTTCGCAGCCGATACGTaGTTTCTGGGTGATCATTAT +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVFAADT*FLGDHY
Trigger: ATAATGATCACCCAGAAATCACGTATCGGCTGCGAA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCACATGGAGCTGTGCTGTaGGGTCCGCCACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSHGAVL*GPPPAA
Trigger: AGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATG...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAGGGTCCACCTGGGATTaGAGCACAGACGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSGSTWD*STDGPP
Trigger: AGGAGGGCCGTCTGTGCTTCAATCCCAGGTGGACCC...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAAGGGCATTTGTGGGCTaGGGAATGCTTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIRAFVG*GMLFFF
Trigger: GAAGAAGAAAAGCATTCCTCAGCCCACAAATGCCCT...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACTGCAAACTTCTTTTTaGAGTACAGCGATTGCAACC +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVLQTSF*STAIAT
Trigger: GGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGAGCCACACTCAATGTaGATGCATACACGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVEPHSM*MHTRKV
Trigger: AACCTTTCGTGTATGCATTCACATTGAGTGTGGCTC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAACGCTGAGCAGCCCCTaGATGCTGGAAAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSTLSSP*MLERRL
Trigger: GAGCCGCCTTTCCAGCATGCAGGGGCTGCTCAGCGT...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR GCA 90 bp AGCCACAACATAACACATTCAATCTGGTTTTCATATTACAAAGAGCTGTCCAATACGCTGAGCAGCCCCTaGATGCTGGAAAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SHNITHSIWFSYYKELSNTLSSP*MLERRL
Trigger: GAGCCGCCTTTCCAGCATGCAGGGGCTGCTCAGCGT...ATTGGACAGCTCTTTGTAATATGAAAACCAGATTGAATGTGTTATGTTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR GCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAACCTGCTGCTTGACTTaGTTATGCTCAGTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSITCCLT*LCSVVS
Trigger: GGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGT...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAAGGTCCGCCACCTGCTaGTTGACTTGCTTATGCTCA +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLRSATC*LTCLCS
Trigger: TGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTCGATAGAAGGATGTTaGAATTCTGAGCTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVSIEGC*NSELSD
Trigger: GTCGGAGAGCTCAGAATTGCAACATCCTTCTATCGA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCCATCTGGTTGTATTTTaGCAGCCTCTTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVHLVVF*QPLPQS
Trigger: ACTTTGGGGAAGAGGCTGGCAAAATACAACCAGATG...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATTAACATGGTGTTATTaGAGACCTGGGTTAACTCGG +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVLTWCY*RPGLTR
Trigger: CCGAGTTAACCCAGGTCTGCAATAACACCATGTTAA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAGGGCATGGGCAATGCTaGTTCCATGGTCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIGHGQC*FHGLKR
Trigger: GCGCTTCAGACCATGGAACCAGCATTGCCCATGCCC...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGAGCCTCCACAGGGGGCATaGGCAATGCTGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: IWFSYYKELSNSSGEMEEPPQGA*AMLVPW
Trigger: CCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGG...CTCTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATACTCCTGCTGAGCTCATaGAGCTGTGCTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIILLLSS*SCAVRS
Trigger: GGACCTCACAGCACAGCTCCATGAGCTCAGCAGGAG...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGCCAAAGAACTCATCTaGTTGTATTTTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVAKELI*LYFASL
Trigger: GAGGCTGGCAAAATACAACCAGATGAGTTCTTTGGC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTGGGTTAACTCGGGATTaGGGGAGTGCAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCGLTRD*GSATSA
Trigger: AGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCC...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACGATGTGACTAAACGCTaGGCAGCCCCTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNDVTKR*AAPACW
Trigger: CCAGCATGCAGGGGCTGCTCAGCGTTTAGTCACATC...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR TCA 90 bp ACAAAAACAACATCCAGGGAATTGACACTGGCTACATGTAGCACCACAGCCACATTCTATTTCTTGATGTaGCTAAACGCTGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TKTTSRELTLATCSTTATFYFLM*LNAEQP
Trigger: GGGCTGCTCAGCGTTTAGTCACATCAAGAAATAGAA...TGTGGCTGTGGTGCTACATGTAGCCAGTGTCAATTCCCTGGATGTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR TCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATCTGTGCTCAGACTCTaGGCAATTACATTAATACTC +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVSVLRL*AITLIL
Trigger: GAGTATTAATGTAATTGCTCAGAGTCTGAGCACAGA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCACACCAGGAGGTGGCATaGTTGCCCCTAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSHQEVA*LPLREE
Trigger: CTCCTCCCTTAGGGGCAATCATGCCACCTCCTGGTG...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCATTTACTTTCGCAGCTTaGGGAATATCTCGCAATTCT +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPFTFAA*GISRNS
Trigger: AGAATTGCGAGATATTCCTCAAGCTGCGAAAGTAAA...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATTTACTTTCGCAGCTTaGGGAATATCTCGCAATTCT +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVFTFAA*GISRNS
Trigger: AGAATTGCGAGATATTCCTCAAGCTGCGAAAGTAAA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCAAGCTGGTCCTATTACTaGTGTGATACATCAACATCA +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPSWSYY*CDTSTS
Trigger: TGATGTTGATGTATCACATCAGTAATAGGACCAGCT...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAAGTACTGAACAGTGTTaGCACTCCTCTTGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSISTEQC*HSSCKA
Trigger: TGCCTTACAAGAGGAGTGGCAACACTGTTCAGTACT...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAGTGAGGTCCGCCACCTaGTGCTTGACTTGCTTATGC +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIVRSAT*CLTCLC
Trigger: GCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCAC...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCGTGAGGTCCGCCACCTaGTGCTTGACTTGCTTATGC +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAVRSAT*CLTCLC
Trigger: GCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCAC...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTTGTGGGCTGAGGAATaGTTTTCTTCTTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVLWAEE*FSSSVL
Trigger: TAGCACTGAAGAAGAAAAGCATTCCTCAGCCCACAA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATTCTGCCACACGCTCTaGAAACTTCTTTTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVFCHTL*KLLFEV
Trigger: TACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAACCACCTCCAGCAACTaGTTGAGGGCACCACTCCTA +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIITTSSN*LRAPLL
Trigger: TAGGAGTGGTGCCCTCAAGCAGTTGCTGGAGGTGGT...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACCCAAAGTGCTTCACTaGTTTAGTAAACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVPKVLH*FSKQVF
Trigger: AAAGACCTGTTTACTAAAGCAGTGAAGCACTTTGGG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAGCCTCTTCCCCAAAGTaGTTCACTGCTTTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIASSPK*FTALVN
Trigger: GTTTACTAAAGCAGTGAAGCACTTTGGGGAAGAGGC...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAAAACAACATCCAGGGAATTGACACTGGCTACATGTAGCACCACAGCCACAGCACTCTGGGTACAATaGGATCCGGTTAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: TKTTSRELTLATCSTTATALWVQ*DPVKQF
Trigger: AAACTGTTTAACCGGATCCCATTGTACCCAGAGTGC...TGTGGCTGTGGTGCTACATGTAGCCAGTGTCAATTCCCTGGATGTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGAGTTTTCCAAAGGTGTaGAGTCAGGGTCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMSFPKV*SQGPVL
Trigger: AAGGACAGGACCCTGACTCCACACCTTTGGAAAACT...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCGGAACCTATCAGCCTTaGCCATCCGATCCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETGTYQP*PSDPVR
Trigger: ACGAACTGGATCGGATGGCCAAGGCTGATAGGTTCC...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAGTGTTATTGCAGACCTaGGTTAACTCGGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLVLLQT*VNSGLG
Trigger: CCCCAATCCCGAGTTAACCCAGGTCTGCAATAACAC...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATATCTGCACCTTTAACATaGTGTTATTGCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSISAPLT*CYCRPG
Trigger: CCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGA...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAGGAGGCCCACCAGGATaGCCATATCAAAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIGGPPG*PYQRRM
Trigger: CATCCTCCTTTGATATGGCCATCCTGGTGGGCCTCC...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGAACCAAAAATGGAAATaGCAAAGGAGGCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMNQKWK*QRRPTR
Trigger: CCTGGTGGGCCTCCTTTGCCATTTCCATTTTTGGTT...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 72 bp AACATGGTGTTATTGCAGACCTGGGTTAACTCGGGATaGGGGGAGTGCAACCTCTGCTTTGTATTTATGACT +
Preference number: 4 (lower is better)
Translates to: NMVLLQTWVNSG*GECNLCFVFMT
Trigger: AGTCATAAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAACACCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 72 bp CCCAATGAAGTACTGACAAAAACAACATCCAGGGAATaGACACTGGCTACATGTAGCACCACAGCCACAACA +
Preference number: 4 (lower is better)
Translates to: PNEVLTKTTSRE*TLATCSTTATT
Trigger: TGTTGTGGCTGTGGTGCTACATGTAGCCAGTGTCAATTCCCTGGATGTTGTTTTTGTCAGTACTTCATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR TCA 90 bp CTGTCCAATTCTAGTGGTGAAATGGAAGAGCAAATGGAATCAATGATTATTTTCGATGTGACTAAACGCTaGGCAGCCCCTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LSNSSGEMEEQMESMIIFDVTKR*AAPACW
Trigger: CCAGCATGCAGGGGCTGCTCAGCGTTTAGTCACATC...GAAAATAATCATTGATTCCATTTGCTCTTCCATTTCACCACTAGAATTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR TCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCGCTGGTTCCATGGTCTaGAGCGCAAAGTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETAGSMV*SAKLLS
Trigger: TGATAGCAACTTTGCGCTTCAGACCATGGAACCAGC...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTCTCTGTGTTTGTCTGTaGGGTCCAGTTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCLCVCL*GPVHPP
Trigger: TGGTGGATGAACTGGACCTCACAGACAAACACAGAG...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAGGCCATCCAAGTCGATaGATCTGGTTACAAACCTCA +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLGHPSR*IWLQTS
Trigger: TGAGGTTTGTAACCAGATTCATCGACTTGGATGGCC...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGAGTAGTAGCCAGTACTaGACAGTGTTGCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKSSSQY*TVLPLL
Trigger: GAGGAGTGGCAACACTGTTCAGTACTGGCTACTACT...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAAGGATGTTGCAATTCTaGGCTCTCCGACCATCAATC +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLRMLQF*ALRPSI
Trigger: GATTGATGGTCGGAGAGCTCAGAATTGCAACATCCT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTTCTTGTTTGGCTTCTaGCACAGCTTGAAGAAATTG +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVFLFGF*HSLKKL
Trigger: CAATTTCTTCAAGCTGTGTCAGAAGCCAAACAAGAA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAATAGTATTGTGCTTCTaGACAGTCATGGCGTTCGGG +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLIVLCF*TVMAFG
Trigger: CCCGAACGCCATGACTGTTCAGAAGCACAATACTAT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGAGAGGGGGCATGGGCAATaGTGGTTCCATGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IWFSYYKELSNSSGEMEERGHGQ*WFHGLK
Trigger: CTTCAGACCATGGAACCAGCATTGCCCATGCCCCCT...CTCTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR GCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAAGGTCCGCCACCTGCTaGTTGACTTGCTTATGCTCA +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIRSATC*LTCLCS
Trigger: TGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCT...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGCATCTGGTTGTATTTTaGCAGCCTCTTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMHLVVF*QPLPQS
Trigger: ACTTTGGGGAAGAGGCTGGCAAAATACAACCAGATG...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGTTGGTCTCTCTCTGCTaGTGTCAGTCATCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKLVSLC*CQSSGW
Trigger: CCAACCAGATGACTGACAGCAGCAGAGAGAGACCAA...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTTTGGTCTCTCTCTGCTaGTGTCAGTCATCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCLVSLC*CQSSGW
Trigger: CCAACCAGATGACTGACAGCAGCAGAGAGAGACCAA...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTCTTTCTTGGGGCCATaGCTGAATTCTGTTCTATTT +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVSFLGP*LNSVLF
Trigger: AAATAGAACAGAATTCAGCCATGGCCCCAAGAAAGA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TCAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGGGCATGGGCAATGCTaGTTCCATGGTCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SIWFSYYKELSNSSGEMEGHGQC*FHGLKR
Trigger: GCGCTTCAGACCATGGAACCAGCATTGCCCATGCCC...TTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCCTTATCTCCGGGCTGTaGGGGCTGAGACTTCTGATA +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQALISGL*GLRLLI
Trigger: TATCAGAAGTCTCAGCCCCCACAGCCCGGAGATAAG...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCATTTCGTTTTCTTGTTTaGCTTCTGACACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPFRFLV*LLTQLE
Trigger: TTCAAGCTGTGTCAGAAGCCAAACAAGAAAACGAAA...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAAAAATTGCCACTGTTTaGATTGCAAGGCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVKIATV*IARQCN
Trigger: ATTACACTGCCTTGCAATCCAAACAGTGGCAATTTT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 72 bp ATGATTAAAAGGGGCAAGAGGGACAGCTACACAAACTaGCTCCTTTATGTGACTTTCCCTCCACCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: MIKRGKRDSYTN*LLYVTFPPPVY
Trigger: ATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCTTTTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTATGTATTCGAGACTCTaGGGTCTCGTAGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCMYSRL*GLVVHG
Trigger: ACCATGGACTACGAGACCTCAGAGTCTCGAATACAT...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCAGTAGTAGCCAGTACTaGACAGTGTTGCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQASSSQY*TVLPLL
Trigger: GAGGAGTGGCAACACTGTTCAGTACTGGCTACTACT...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCCCTAAACACCTCTTCTaGGCCAGAACGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETPKHLF*ARTNCF
Trigger: GAAGCAATTCGTTCTGGCTCAGAAGAGGTGTTTAGG...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCACTTGCTCCTTTATGTaGCTTTCCCTCCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETTCSFM*LSLHLS
Trigger: AGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGT...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGACTTGCTCCTTTATGTaGCTTTCCCTCCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKTCSFM*LSLHLS
Trigger: AGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGT...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp CTGTCCAATTCTAGTGGTGAAATGGAAGAGCAAATGGAATCAATGATTATTTTCCTGGAAAGGCGGCTCTaGACTCTGGGTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: LSNSSGEMEEQMESMIIFLERRL*TLGTMG
Trigger: TCCCATTGTACCCAGAGTGCAGAGCCGCCTTTCCAG...GAAAATAATCATTGATTCCATTTGCTCTTCCATTTCACCACTAGAATTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR GCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGACCTTGGCTGAGCACTaGATTAATGAAGGACATGAT +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMTLAEH*INEGHD
Trigger: ATCATGTCCTTCATTAATGCAGTGCTCAGCCAAGGT...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCTCGGGATTGGGGGAGTaGAACCTCTGCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETSGLGE*NLCFVF
Trigger: AAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGA...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAAAACAACATCCAGGGAATTGACACTGGCTACATGTAGCACCACAGCCACATCTTTCTTGGGGCCATaGCTGAATTCTGTTCTATTT +
Preference number: 4 (lower is better)
Translates to: TKTTSRELTLATCSTTATSFLGP*LNSVLF
Trigger: AAATAGAACAGAATTCAGCCATGGCCCCAAGAAAGA...TGTGGCTGTGGTGCTACATGTAGCCAGTGTCAATTCCCTGGATGTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCGCAATGCTGGTTCCATaGTCTGAAGCGCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAAMLVP*SEAQSC
Trigger: GCAACTTTGCGCTTCAGACCATGGAACCAGCATTGC...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTTTCGTTTTCTTGTTTaGCTTCTGACACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVFRFLV*LLTQLE
Trigger: TTCAAGCTGTGTCAGAAGCCAAACAAGAAAACGAAA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGTACAGTGCACACATTaGTATTCTATTCATCCCTTA +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVVQCTH*YSIHPL
Trigger: TAAGGGATGAATAGAATACCAATGTGTGCACTGTAC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAGGGTTAACTCGGGATTaGGGGAGTGCAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSGLTRD*GSATSA
Trigger: AGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCC...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTAACCAAAAATGGAAATaGCAAAGGAGGCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCNQKWK*QRRPTR
Trigger: CCTGGTGGGCCTCCTTTGCCATTTCCATTTTTGGTT...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATATTCAACAATGGCACATaGAATTACCTGCACACAGTT +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIFNNGT*NYLHTV
Trigger: AACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAA...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGTACGTGATTTCTGGGTaGTCATTATTTCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMYVISG*SLFRKQ
Trigger: CTGTTTCCGAAATAATGATCACCCAGAAATCACGTA...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAATGTATTCGAGACTCTaGGGTCTCGTAGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIMYSRL*GLVVHG
Trigger: ACCATGGACTACGAGACCTCAGAGTCTCGAATACAT...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGCCTTTATACAGCCAATaGGAGAAGTATGTATTCGAG +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMPLYSQ*EKYVFE
Trigger: CTCGAATACATACTTCTCTCATTGGCTGTATAAAGG...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAAGGATGTTGCAATTCTaGGCTCTCCGACCATCAATC +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIRMLQF*ALRPSI
Trigger: GATTGATGGTCGGAGAGCTCAGAATTGCAACATCCT...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAGTCCTATTACTGATGTaGTACATCAACATCACAATG +
Preference number: 4 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIVLLLM*YINITM
Trigger: CATTGTGATGTTGATGTATCACATCAGTAATAGGAC...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGCATATCAAAGGAGGATaGTTAAAAGGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKHIKGG*LKGARG
Trigger: CCCTCTTGCCCCTTTTAATCATCCTCCTTTGATATG...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGTCTGAAGCGCAAAGTTaGTATCATTTCGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKSEAQS*YHFAAD
Trigger: ATCGGCTGCGAAATGATAGCAACTTTGCGCTTCAGA...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATCTTGAATCCATATaGATTCCCTCTTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVYLESI*IPSLTF
Trigger: AAAGGTCAAAGAGGGAATGCATATGGATTCAAGATA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCATGATTCCTGTACAGTaGACACATTGGTATTCTATT +
Preference number: 4 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVMIPVQ*THWYSI
Trigger: AATAGAATACCAATGTGTGCACTGTACAGGAATCAT...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAGGGGAGTGCAACCTCTaGTTTGTATTTATGACTGTT +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLGECNL*FVFMTV
Trigger: AACAGTCATAAATACAAAGCAGAGGTTGCACTCCCC...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATCGGGATTGGGGGAGTaGAACCTCTGCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIISGLGE*NLCFVF
Trigger: AAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTATTAACATGGTGTTATTaGAGACCTGGGTTAACTCGG +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLLTWCY*RPGLTR
Trigger: CCGAGTTAACCCAGGTCTGCAATAACACCATGTTAA...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGAGCCAAGTCTCTATCTaGACCTTTAACATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMSQVSI*TFNMVL
Trigger: TAACACCATGTTAAAGGTGCAGATAGAGACTTGGCT...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAGCATCTGCTTCTTTCTaGTTGGAGTTACTGTTCACA +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLASASF*LELLFT
Trigger: TGTGAACAGTAACTCCAAGCAGAAAGAAGCAGATGC...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395125.1
CDS-3UTR CCA 90 bp CAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGGCAATGCTGGTTCCATaGTCTGAAGCGCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: QSGFHITKSCPILVVKWKAMLVP*SEAQSC
Trigger: GCAACTTTGCGCTTCAGACCATGGAACCAGCATTGC...CTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCAGTTTTCCAAAGGTGTaGAGTCAGGGTCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQASFPKV*SQGPVL
Trigger: AAGGACAGGACCCTGACTCCACACCTTTGGAAAACT...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAGGAACCTATCAGCCTTaGCCATCCGATCCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSGTYQP*PSDPVR
Trigger: ACGAACTGGATCGGATGGCCAAGGCTGATAGGTTCC...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATTCTATTTCTTGATGTaGCTAAACGCTGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIFYFLM*LNAEQP
Trigger: GGGCTGCTCAGCGTTTAGTCACATCAAGAAATAGAA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR TCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATCTTGGGGCCATGGCTaGATTCTGTTCTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIISWGHG*ILFYFL
Trigger: CAAGAAATAGAACAGAATTCAGCCATGGCCCCAAGA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR TCA 90 bp CATTCAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGCTGGTTCCATGGTCTaGAGCGCAAAGTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: HSIWFSYYKELSNSSGEMAGSMV*SAKLLS
Trigger: TGATAGCAACTTTGCGCTTCAGACCATGGAACCAGC...CATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGATTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR TCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAAGCTGGTCCTATTACTaGTGTGATACATCAACATCA +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLSWSYY*CDTSTS
Trigger: TGATGTTGATGTATCACATCAGTAATAGGACCAGCT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGAGCAACATCCAGGGAATTaGCACTGGCTACATGTAGCA +
Preference number: 4 (lower is better)
Translates to: IWFSYYKELSNSSGEMEEQHPGN*HWLHVA
Trigger: TGCTACATGTAGCCAGTGTCAATTCCCTGGATGTTG...CTCTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR GCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCACCTTGGCTGAGCACTaGATTAATGAAGGACATGAT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETTLAEH*INEGHD
Trigger: ATCATGTCCTTCATTAATGCAGTGCTCAGCCAAGGT...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGTTGTGGGCTGAGGAATaGTTTTCTTCTTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKLWAEE*FSSSVL
Trigger: TAGCACTGAAGAAGAAAAGCATTCCTCAGCCCACAA...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTTTTAGGTTTCACTTCTaGCACACGCTCTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCFRFHF*HTLCKL
Trigger: AAGTTTGCAGAGCGTGTGGCAGAAGTGAAACCTAAA...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCGGGGAGTGCAACCTCTaGTTTGTATTTATGACTGTT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETGECNL*FVFMTV
Trigger: AACAGTCATAAATACAAAGCAGAGGTTGCACTCCCC...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTGTCATCAATGGCATCTaGTTCTTTCTGCTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCVINGI*FFLLGV
Trigger: AACTCCAAGCAGAAAGAAGCAGATGCCATTGATGAC...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395125.1
CDS-3UTR CCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGATTTCAGGGCATTTGTaGGCTGAGGAATGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKISGHL*AEECFS
Trigger: AGAAAAGCATTCCTCAGCCCACAAATGCCCTGAAAT...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp CAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGTTCGCAGCCGATACGTaGTTTCTGGGTGATCATTAT +
Preference number: 4 (lower is better)
Translates to: QSGFHITKSCPILVVKWKFAADT*FLGDHY
Trigger: ATAATGATCACCCAGAAATCACGTATCGGCTGCGAA...CTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAGGCCATCCAAGTCGATaGATCTGGTTACAAACCTCA +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSGHPSR*IWLQTS
Trigger: TGAGGTTTGTAACCAGATTCATCGACTTGGATGGCC...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCTGGTCTTTAGAAAGTTaGGGATACATGATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETWSLES*GYMIGH
Trigger: ATGGCCTATCATGTATCCTCAACTTTCTAAAGACCA...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGCCTTTATACAGCCAATaGGAGAAGTATGTATTCGAG +
Preference number: 4 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKPLYSQ*EKYVFE
Trigger: CTCGAATACATACTTCTCTCATTGGCTGTATAAAGG...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTTTCTTGTTTGGCTTCTaGCACAGCTTGAAGAAATTG +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCFLFGF*HSLKKL
Trigger: CAATTTCTTCAAGCTGTGTCAGAAGCCAAACAAGAA...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAATAGTATTGTGCTTCTaGACAGTCATGGCGTTCGGG +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSIVLCF*TVMAFG
Trigger: CCCGAACGCCATGACTGTTCAGAAGCACAATACTAT...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp CAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGAGCCCAATGAAGTACTaGCAAAAACAACATCCAGGG +
Preference number: 4 (lower is better)
Translates to: QSGFHITKSCPILVVKWKSPMKY*QKQHPG
Trigger: CCCTGGATGTTGTTTTTGTCAGTACTTCATTGGGCT...CTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR GCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAACCTGCTGCTTGACTTaGTTATGCTCAGTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSTCCLT*LCSVVS
Trigger: GGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGT...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCTTTAGGTTTCACTTCTaGCACACGCTCTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAFRFHF*HTLCKL
Trigger: AAGTTTGCAGAGCGTGTGGCAGAAGTGAAACCTAAA...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACGCCTCTTCCCCAAAGTaGTTCACTGCTTTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNASSPK*FTALVN
Trigger: GTTTACTAAAGCAGTGAAGCACTTTGGGGAAGAGGC...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTCACACTCAATGTGAATaGATACACGAAAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCHTQCE*IHERFW
Trigger: CCAAAACCTTTCGTGTATGCATTCACATTGAGTGTG...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCAGCCAAGTCTCTATCTaGACCTTTAACATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETSQVSI*TFNMVL
Trigger: TAACACCATGTTAAAGGTGCAGATAGAGACTTGGCT...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTTCTTTCTTGGGGCCATaGCTGAATTCTGTTCTATTT +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCSFLGP*LNSVLF
Trigger: AAATAGAACAGAATTCAGCCATGGCCCCAAGAAAGA...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCGGTTACAAACCTCATTaGTTTTGTCCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAGYKPH*FCPQCC
Trigger: ACAGCACTGAGGACAAAACCAATGAGGTTTGTAACC...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAATTTCAGGGCATTTGTaGGCTGAGGAATGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIISGHL*AEECFS
Trigger: AGAAAAGCATTCCTCAGCCCACAAATGCCCTGAAAT...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCTTCAACAATGGCACATaGAATTACCTGCACACAGTT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETFNNGT*NYLHTV
Trigger: AACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAA...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
3UTR CAA 72 bp TCATTATATTCCAATCTTCCTCATCTCCAAGCCTTTTaGAGCCAAGTCTCTATCTGCACCTTTAACATGGTG +
Preference number: 4 (lower is better)
Translates to: SLYSNLPHLQAF*SQVSICTFNMV
Trigger: CACCATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAGATTGGAATATAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATACGTGATTTCTGGGTaGTCATTATTTCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIYVISG*SLFRKQ
Trigger: CTGTTTCCGAAATAATGATCACCCAGAAATCACGTA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATTCGCAGCCGATACGTaGTTTCTGGGTGATCATTAT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSFAADT*FLGDHY
Trigger: ATAATGATCACCCAGAAATCACGTATCGGCTGCGAA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCTGGTCTTTAGAAAGTTaGGGATACATGATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAWSLES*GYMIGH
Trigger: ATGGCCTATCATGTATCCTCAACTTTCTAAAGACCA...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACCTGCAAACTTCTTTTTaGAGTACAGCGATTGCAACC +
Preference number: 4 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNLQTSF*STAIAT
Trigger: GGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAG...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAAGTACTGAACAGTGTTaGCACTCCTCTTGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSSTEQC*HSSCKA
Trigger: TGCCTTACAAGAGGAGTGGCAACACTGTTCAGTACT...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAATGATTCCTGTACAGTaGACACATTGGTATTCTATT +
Preference number: 4 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLMIPVQ*THWYSI
Trigger: AATAGAATACCAATGTGTGCACTGTACAGGAATCAT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAGCACTCTGGGTACAATaGGATCCGGTTAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSALWVQ*DPVKQF
Trigger: AAACTGTTTAACCGGATCCCATTGTACCCAGAGTGC...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR CCA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCCCGATACGTGATTTCTaGGTGATCATTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAPIRDF*VIIISE
Trigger: TTCCGAAATAATGATCACCCAGAAATCACGTATCGG...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAGCCAAAGAACTCATCTaGTTGTATTTTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSAKELI*LYFASL
Trigger: GAGGCTGGCAAAATACAACCAGATGAGTTCTTTGGC...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACATACAGTTCCAAAACTaGGCCAGACCAAATTTATCC +
Preference number: 4 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNIQFQN*ARPNLS
Trigger: GGATAAATTTGGTCTGGCTCAGTTTTGGAACTGTAT...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACCCGATACGTGATTTCTaGGTGATCATTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNPIRDF*VIIISE
Trigger: TTCCGAAATAATGATCACCCAGAAATCACGTATCGG...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp ATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGAGCCGATACGTGATTTCTaGGTGATCATTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: IWFSYYKELSNSSGEMEEPIRDF*VIIISE
Trigger: TTCCGAAATAATGATCACCCAGAAATCACGTATCGG...CTCTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CCA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTTGTCCTTTGTCATTCTaGATAACTATCTGCTGTATA +
Preference number: 4 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCCPLSF*ITICCI
Trigger: TATACAGCAGATAGTTATCCAGAATGACAAAGGACA...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCTGTTTTTGTCGATGCTaGATTTTGTGTCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: FSTMAHGITCTQFSGKETCFCRC*ILCQQF
Trigger: AAATTGCTGACACAAAATCCAGCATCGACAAAAACA...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp AGCCACAACATAACACATTCAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTACGTGATTTCTGGGTaGTCATTATTTCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: SHNITHSIWFSYYKELSNYVISG*SLFRKQ
Trigger: CTGTTTCCGAAATAATGATCACCCAGAAATCACGTA...ATTGGACAGCTCTTTGTAATATGAAAACCAGATTGAATGTGTTATGTTGTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR TCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATCTGTGCTCAGACTCTaGGCAATTACATTAATACTC +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSSVLRL*AITLIL
Trigger: GAGTATTAATGTAATTGCTCAGAGTCTGAGCACAGA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR TCA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACGTCCTATTACTGATGTaGTACATCAACATCACAATG +
Preference number: 4 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNVLLLM*YINITM
Trigger: CATTGTGATGTTGATGTATCACATCAGTAATAGGAC...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATTCTGCCACACGCTCTaGAAACTTCTTTTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSFCHTL*KLLFEV
Trigger: TACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCACCCAAAGTGCTTCACTaGTTTAGTAAACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSPKVLH*FSKQVF
Trigger: AAAGACCTGTTTACTAAAGCAGTGAAGCACTTTGGG...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACTGTCCTTTGTCATTCTaGATAACTATCTGCTGTATA +
Preference number: 4 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNCPLSF*ITICCI
Trigger: TATACAGCAGATAGTTATCCAGAATGACAAAGGACA...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCAAAAATTGCCACTGTTTaGATTGCAAGGCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSKIATV*IARQCN
Trigger: ATTACACTGCCTTGCAATCCAAACAGTGGCAATTTT...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR GCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATATCTTGAATCCATATaGATTCCCTCTTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSYLESI*IPSLTF
Trigger: AAAGGTCAAAGAGGGAATGCATATGGATTCAAGATA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CCA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATGTTTTTGTCGATGCTaGATTTTGTGTCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSCFCRC*ILCQQF
Trigger: AAATTGCTGACACAAAATCCAGCATCGACAAAAACA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 90 bp GCAGCCCCTGCATGCTGGAAAGGCGGCTCTGCACTCTGGGTACAATaGGATCCGGTTAAACAGTTTCCTTCACAGCCGCTCGTAGGTTAC +
Preference number: 5 (lower is better)
Translates to: AAPACWKGGSALWVQ*DPVKQFPSQPLVGY
Trigger: GTAACCTACGAGCGGCTGTGAAGGAAACTGTTTAACCGGATCCCATTGTACCCAGAGTGCAGAGCCGCCTTTCCAGCATGCAGGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000556596.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAAGGGTCCACCTGGGATaGAAGCACAGACGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVRVHLG*KHRRPS
Trigger: GGAGGGCCGTCTGTGCTTCAATCCCAGGTGGACCCT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 90 bp ACTGAACATGACATCCAGCTCCTCCACAGGGGGCATGGGCAATGCTaGTTCCATGGTCTGAAGCGCAAAGTTGCTATCATTTCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: TEHDIQLLHRGHGQC*FHGLKRKVAIISQP
Trigger: CGGCTGCGAAATGATAGCAACTTTGCGCTTCAGACCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGGAGCTGGATGTCATGTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS GCA 90 bp TTCACTGAACATGACATCCAGCTCCTCCACAGGGGGCATGGGCAATaGTGGTTCCATGGTCTGAAGCGCAAAGTTGCTATCATTTCGCAG +
Preference number: 5 (lower is better)
Translates to: FTEHDIQLLHRGHGQ*WFHGLKRKVAIISQ
Trigger: CTGCGAAATGATAGCAACTTTGCGCTTCAGACCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGGAGCTGGATGTCATGTTCAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS-3UTR CAA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGAGGGTCCACCTGGGATaGAAGCACAGACGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMRVHLG*KHRRPS
Trigger: GGAGGGCCGTCTGTGCTTCAATCCCAGGTGGACCCT...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAAGGAACCTATCAGCCTaGGCCATCCGATCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVRNLSA*AIRSSS
Trigger: CGAACTGGATCGGATGGCCAAGGCTGATAGGTTCCT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 90 bp CACTCCTCTTGTAAGGCATTTGGAGGCAGTGGTGCAGGATGGACATaGAATGCGGGTAAGCTTCACTATGTGTCAGCCTCTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: HSSCKAFGGSGAGWT*NAGKLHYVSASSWS
Trigger: TGACCAGGAAGAGGCTGACACATAGTGAAGCTTACCCGCATTTCATGTCCATCCTGCACCACTGCCTCCAAATGCCTTACAAGAGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 90 bp GACTATGTGTCATCTGCCTGCCCCATGACCTCAGCCTTGGCCACATaGCTTGTGGTACCAGTCTCTACAGAAGAAGGATGCCTCCTTATA +
Preference number: 5 (lower is better)
Translates to: DYVSSACPMTSALAT*LVVPVSTEEGCLLI
Trigger: TATAAGGAGGCATCCTTCTTCTGTAGAGACTGGTACCACAAGTCATGTGGCCAAGGCTGAGGTCATGGGGCAGGCAGATGACACATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS TCA 90 bp TCGGGCAGTTTAGACCAGTTGAAGGATTTCAGGGCATTTGTGGGCTaGGGAATGCTTTTCTTCTTCAGTGCTAGGCCCATTGGAGCACCA +
Preference number: 5 (lower is better)
Translates to: SGSLDQLKDFRAFVG*GMLFFFSARPIGAP
Trigger: TGGTGCTCCAATGGGCCTAGCACTGAAGAAGAAAAGCATTCCTCAGCCCACAAATGCCCTGAAATCCTTCAACTGGTCTAAACTGCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCGCCTGCAGAACCTTCTaGTGGCCCCCGGGAACCAGG +
Preference number: 5 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAACRTF*WPPGTR
Trigger: CCTGGTTCCCGGGGGCCACAAGAAGGTTCTGCAGGC...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACACCTGCTGCTTGACTaGCTTATGCTCAGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVHLLLD*LMLSSL
Trigger: GAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 90 bp TGTGATGAACTGGCTGACAACAGACACAAACTTATCTCCGGGCTGTaGGGGCTGAGACTTCTGATATTCCAGCTCTTTACTTTCGCAGCT +
Preference number: 5 (lower is better)
Translates to: CDELADNRHKLISGL*GLRLLIFQLFTFAA
Trigger: AGCTGCGAAAGTAAAGAGCTGGAATATCAGAAGTCTCAGCCCCCACAGCCCGGAGATAAGTTTGTGTCTGTTGTCAGCCAGTTCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553966.5
CDS-3UTR CAA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCAATGGCTTCTCTGTGTTaGTCTGTGAGGTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPMASLC*SVRSSS
Trigger: TGAACTGGACCTCACAGACAAACACAGAGAAGCCAT...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACGCCTGCAGAACCTTCTaGTGGCCCCCGGGAACCAGG +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNACRTF*WPPGTR
Trigger: CCTGGTTCCCGGGGGCCACAAGAAGGTTCTGCAGGC...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAACTGTTCCTTCCAGTTaGTTCTCGGGCAGTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVTVPSS*FSGSLD
Trigger: GTCTAAACTGCCCGAGAACAAACTGGAAGGAACAGT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTGTTCCAACATGTCCTaGGGCAGATCTTCCTGTTCG +
Preference number: 5 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVCSNMS*GRSSCS
Trigger: CGAACAGGAAGATCTGCCCAAGGACATGTTGGAACA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTAACGTTCCCTTTCACGTaGTTCTTTGAGCTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVTFPFT*FFELSF
Trigger: GAAGCTCAGCTCAAAGAACAACGTGAAAGGGAACGT...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACATCTCCAAGCCTTTTaGAGCCAAGTCTCTATCTGC +
Preference number: 5 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPHLQAF*SQVSIC
Trigger: GCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATG...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS GCA 90 bp TTATACTCTAGTGCCCCTGCCCTTCCTCCCACCATGCCAAAGCCATaGCCATGTGCACACGCATATTTGCAAATAGCAATTTACCAACAA +
Preference number: 5 (lower is better)
Translates to: LYSSAPALPPTMPKP*PCAHAYLQIAIYQQ
Trigger: TTGTTGGTAAATTGCTATTTGCAAATATGCGTGTGCACATGGGCATGGCTTTGGCATGGTGGGAGGAAGGGCAGGGGCACTAGAGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS GCA 90 bp AATTCTGGAAATCAGGTCCAGGGTCCCACCCAGAAGCCAACAGACTaGATTTTGTTCACCACTGCCCTAGAACTTTTGCCAAATAAGTCC +
Preference number: 5 (lower is better)
Translates to: NSGNQVQGPTQKPTD*ILFTTALELLPNKS
Trigger: GGACTTATTTGGCAAAAGTTCTAGGGCAGTGGTGAACAAAATGCAGTCTGTTGGCTTCTGGGTGGGACCCTGGACCTGATTTCCAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS GCA 90 bp ATTTTCTCCACTTTTCCAGACTTGACTTCAGTTGGTGTTGACAACTaGTTGCCAAGCAAACCCACTTGTGTGAGCTCCTCCATGGGCTAC +
Preference number: 5 (lower is better)
Translates to: IFSTFPDLTSVGVDN*LPSKPTCVSSSMGY
Trigger: GTAGCCCATGGAGGAGCTCACACAAGTGGGTTTGCTTGGCAAGCAGTTGTCAACACCAACTGAAGTCAAGTCTGGAAAAGTGGAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS CCA 90 bp TGTGATGAACTGGCTGACAACAGACACAAACTTATCTCCGGGCTGTaGGGGCTGAGACTTCTGATATTCCAGCTCCTTAAACACAGGAAA +
Preference number: 5 (lower is better)
Translates to: CDELADNRHKLISGL*GLRLLIFQLLKHRK
Trigger: TTTCCTGTGTTTAAGGAGCTGGAATATCAGAAGTCTCAGCCCCCACAGCCCGGAGATAAGTTTGTGTCTGTTGTCAGCCAGTTCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS-3UTR CAA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCAGGATTTCAGGGCATTaGTGGGCTGAGGAATGCTTT +
Preference number: 5 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVRISGH*WAEECF
Trigger: AAAGCATTCCTCAGCCCACAAATGCCCTGAAATCCT...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAAGGAACCTATCAGCCTaGGCCATCCGATCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLRNLSA*AIRSSS
Trigger: CGAACTGGATCGGATGGCCAAGGCTGATAGGTTCCT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 90 bp GTGTGGCCATGTGATCTGCACTGGCCAATGAAATGTGGGCACAAGTaGCACCTGTTATTTCCAAGCATAAGCTTAGAGCCTATGAATGGT +
Preference number: 5 (lower is better)
Translates to: VWPCDLHWPMKCGHK*HLLFPSISLEPMNG
Trigger: ACCATTCATAGGCTCTAAGCTTATGCTTGGAAATAACAGGTGTCACTTGTGCCCACATTTCATTGGCCAGTGCAGATCACATGGCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS TCA 90 bp AGCAGAGATTTTCTCCACTTTTCCAGACTTGACTTCAGTTGGTGTTaGCAACTGCTTGCCAAGCAAACCCACTTGTGTGAGCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: SRDFLHFSRLDFSWC*QLLAKQTHLCELLH
Trigger: ATGGAGGAGCTCACACAAGTGGGTTTGCTTGGCAAGCAGTTGTCAACACCAACTGAAGTCAAGTCTGGAAAAGTGGAGAAAATCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS GCA 90 bp AGCTCATGGAGCTGTGCTGTGAGGTCCGCCACCTGCTGCTTGACTTaGTTATGCTCAGTAGTCTCCTTTTCAAGTTTCTCTTTCATTTTA +
Preference number: 5 (lower is better)
Translates to: SSWSCAVRSATCCLT*LCSVVSFSSFSFIL
Trigger: TAAAATGAAAGAGAAACTTGAAAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 90 bp CAAGTGACACCTGTTATTTCCAAGCATAAGCTTAGAGCCTATGAATaGTTTGCCAGGTTTGCCTTTCCTCCTCCACCCTTCCTGGGTATA +
Preference number: 5 (lower is better)
Translates to: QVTPVISKHKLRAYE*FARFAFPPPPFLGI
Trigger: TATACCCAGGAAGGGTGGAGGAGGAAAGGCAAACCTGGCAAACCATTCATAGGCTCTAAGCTTATGCTTGGAAATAACAGGTGTCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACAAACCTCATTGGTTTaGTCCTCAGTGCTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVQTSLV*SSVLSL
Trigger: TAAAGACAGCACTGAGGACAAAACCAATGAGGTTTG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTGGTTACAAACCTCATaGGTTTTGTCCTCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVWLQTS*VLSSVL
Trigger: CAGCACTGAGGACAAAACCAATGAGGTTTGTAACCA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTCAGGGTCCTGTCCTTaGTCATTCTGGATAACTATC +
Preference number: 5 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVSGSCP*SFWITI
Trigger: GATAGTTATCCAGAATGACAAAGGACAGGACCCTGA...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATTCTTTCTGCTGTCTTaGATAGGCAGAGAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVFFLLS*IGREGS
Trigger: AGAACCTTCTCTGCCTATCAAAGACAGCAGAAAGAA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360909.8
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTACAGCGATTGCAACCTTaGCTGATAGTGATTAATTCG +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVQRLQP*LIVINS
Trigger: CGAATTAATCACTATCAGCAAAGGTTGCAATCGCTG...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATGGGTTAACTCGGGATaGGGGGAGTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIWVNSG*GECNLC
Trigger: GCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCATTTAACATGGTGTTATaGCAGACCTGGGTTAACTCG +
Preference number: 5 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPFNMVL*QTWVNS
Trigger: CGAGTTAACCCAGGTCTGCAATAACACCATGTTAAA...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AGGGGCAAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCAGACAGCTACACAAACTaGCTCCTTTATGTGACTTTC +
Preference number: 5 (lower is better)
Translates to: RGKRDSYTNLLLYVTFPPDSYTN*LLYVTF
Trigger: GAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTC...TGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGCCTCTTGTAAGGCATTaGGAGGCAGTGGTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKPLVRH*EAVVQD
Trigger: ATCCTGCACCACTGCCTCCAAATGCCTTACAAGAGG...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATCTTCTGTTTTGCCTTaGAATCTAGGGAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVSSVLP*NLGNVS
Trigger: AGAGACATTCCCTAGATTCAAAGGCAAAACAGAAGA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AAGAGGGACAGCTACACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCGTAAAACCACAGCTCTaGACAACTCTTAGAGCACTA +
Preference number: 5 (lower is better)
Translates to: KRDSYTNLLLYVTFPPPVVKPQL*TTLRAL
Trigger: TAGTGCTCTAAGAGTTGTCAAGAGCTGTGGTTTTAC...GACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACTGGGTTAACTCGGGATaGGGGGAGTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNWVNSG*GECNLC
Trigger: GCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCA...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 90 bp GAGATCTTCACAAGCAGGAGCGTAGTCATCACAGTTTATCAGTTCTaGCTCAGCTCTACCACTGATTTGGTTCTTAACCATGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: EIFTSRSVVITVYQF*LSSTTDLVLNHGML
Trigger: CAACATGCCATGGTTAAGAACCAAATCAGTGGTAGAGCTGAGTCAGAACTGATAAACTGTGATGACTACGCTCCTGCTTGTGAAGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS TCA 90 bp AGGAAGGGCAACTTAAGATGCAGTACTGCCACATATTTGAAGAACTaGAGGTCTAAATCCCTCCACCCACTTAAAGCACAAGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: RKGNLRCSTATYLKN*RSKSLHPLKAQAKH
Trigger: GTGCTTTGCTTGTGCTTTAAGTGGGTGGAGGGATTTAGACCTTCAGTTCTTCAAATATGTGGCAGTACTGCATCTTAAGTTGCCCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS GCA 90 bp TGGAGCTGTGCTGTGAGGTCCGCCACCTGCTGCTTGACTTGCTTATaGTCAGTAGTCTCCTTTTCAAGTTTCTCTTTCATTTTATTTAAG +
Preference number: 5 (lower is better)
Translates to: WSCAVRSATCCLTCL*SVVSFSSFSFILFK
Trigger: CTTAAATAAAATGAAAGAGAAACTTGAAAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS GCA 90 bp GGGGGCAGGTTCTGGCTTTCTATTTCAAACTTCCTTGTTAACACCTaGAACAGAGTTCTTCATGCAGTGGAGATCAAAGAAGGAAGAGAT +
Preference number: 5 (lower is better)
Translates to: GGRFWLSISNFLVNT*NRVLHAVEIKEGRD
Trigger: ATCTCTTCCTTCTTTGATCTCCACTGCATGAAGAACTCTGTTGCAGGTGTTAACAAGGAAGTTTGAAATAGAAAGCCAGAACCTGCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS-3UTR CAA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGTCAGGGTCCTGTCCTTaGTCATTCTGGATAACTATC +
Preference number: 5 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMSGSCP*SFWITI
Trigger: GATAGTTATCCAGAATGACAAAGGACAGGACCCTGA...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCCACCTGCTGCTTGACTaGCTTATGCTCAGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: FSTMAHGITCTQFSGKETHLLLD*LMLSSL
Trigger: GAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTG...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATCCGCCACCTGCTGCTaGACTTGCTTATGCTCAGTA +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIISATCC*TCLCSV
Trigger: TACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTATTGCAGACCTGGGTTAACTCGGGATTGGGGGAGTGCAACCTCTGCTTTGTATGGTTGGTAATACGTTaGCGATTCCGTTTCAATTTA +
Preference number: 5 (lower is better)
Translates to: LLQTWVNSGLGECNLCFVWLVIR*RFRFNL
Trigger: TAAATTGAAACGGAATCGCAAACGTATTACCAACCA...TACAAAGCAGAGGTTGCACTCCCCCAATCCCGAGTTAACCCAGGTCTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAGTAAAACCACAGCTCTaGACAACTCTTAGAGCACTA +
Preference number: 5 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIVKPQL*TTLRAL
Trigger: TAGTGCTCTAAGAGTTGTCAAGAGCTGTGGTTTTAC...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 90 bp CCTTGGGCAGATCTTCCTGTTCGTCCATTGTTAGAATTGCCCGTTTaGTTTCGTCATTGGATAATTTCAACCTCGATAGAAGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: PWADLPVRPLLELPV*FRHWIISTSIEGCC
Trigger: GCAACATCCTTCTATCGAGGTTGAAATTATCCAATGACGAAATCAAACGGGCAATTCTAACAATGGACGAACAGGAAGATCTGCCCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS-3UTR CAA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCATGGCTTCTCTGTGTTaGTCTGTGAGGTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: FSTMAHGITCTQFSGKETMASLC*SVRSSS
Trigger: TGAACTGGACCTCACAGACAAACACAGAGAAGCCAT...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATATCTGAGTTGCACTTTTaGTGTCTATGTGAACCAGTT +
Preference number: 5 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSISELHF*CLCEPV
Trigger: AACTGGTTCACATAGACACAAAAAGTGCAACTCAGA...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACCCTCTTGTAAGGCATTaGGAGGCAGTGGTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNPLVRH*EAVVQD
Trigger: ATCCTGCACCACTGCCTCCAAATGCCTTACAAGAGG...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTAGGATTTCAGGGCATTaGTGGGCTGAGGAATGCTTT +
Preference number: 5 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCRISGH*WAEECF
Trigger: AAAGCATTCCTCAGCCCACAAATGCCCTGAAATCCT...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTACTGTTCCTTCCAGTTaGTTCTCGGGCAGTTTAGAC +
Preference number: 5 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCTVPSS*FSGSLD
Trigger: GTCTAAACTGCCCGAGAACAAACTGGAAGGAACAGT...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS GCA 90 bp AGAACGAATTGCTTCCACTTTAGGTTTCACTTCTGCCACACGCTCTaGAAACTTCTTTTTGAAGTACAGCGATTGCAACCTTTGCTGATA +
Preference number: 5 (lower is better)
Translates to: RTNCFHFRFHFCHTL*KLLFEVQRLQPLLI
Trigger: TATCAGCAAAGGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAAGTGAAACCTAAAGTGGAAGCAATTCGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS-3UTR CAA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATCCGCCACCTGCTGCTaGACTTGCTTATGCTCAGTA +
Preference number: 5 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSSATCC*TCLCSV
Trigger: TACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTGGCAGTTTAGACCAGTaGAAGGATTTCAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCGSLDQ*KDFRAF
Trigger: AAATGCCCTGAAATCCTTCAACTGGTCTAAACTGCC...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GCAACAGGACAAACTACTCTCTCCACAGGAAACCCAACCACAACAGGATCAATAGTTAGAATTGCCCGTTaGATTTCGTCATTGGATAAT +
Preference number: 5 (lower is better)
Translates to: ATGQTTLSTGNPTTTGSIVRIAR*ISSLDN
Trigger: ATTATCCAATGACGAAATCAAACGGGCAATTCTAAC...TATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACTGTTCCAACATGTCCTaGGGCAGATCTTCCTGTTCG +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNCSNMS*GRSSCS
Trigger: CGAACAGGAAGATCTGCCCAAGGACATGTTGGAACA...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTACAGCGATTGCAACCTTaGCTGATAGTGATTAATTCG +
Preference number: 5 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLQRLQP*LIVINS
Trigger: CGAATTAATCACTATCAGCAAAGGTTGCAATCGCTG...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCACGTTCCCTTTCACGTaGTTCTTTGAGCTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQATFPFT*FFELSF
Trigger: GAAGCTCAGCTCAAAGAACAACGTGAAAGGGAACGT...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTCTGTCAGTCATCTGGTaGGTAATACGTTTGCGATTC +
Preference number: 5 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCLSVIW*VIRLRF
Trigger: GAATCGCAAACGTATTACCAACCAGATGACTGACAG...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTATTGCCACTGTTTGGATaGCAAGGCAGTGTAATGAAA +
Preference number: 5 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLLPLFG*QGSVMK
Trigger: TTTCATTACACTGCCTTGCAATCCAAACAGTGGCAA...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAGACAGCTACACAAACTaGCTCCTTTATGTGACTTTC +
Preference number: 5 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLDSYTN*LLYVTF
Trigger: GAAAGTCACATAAAGGAGCAAGTTTGTGTAGCTGTC...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 90 bp AGCGCAAAGTTGCTATCATTTCGCAGCCGATACGTGATTTCTGGGTaGTCATTATTTCGGAAACAGCAAAAGATGAATGAAATACCTCGT +
Preference number: 5 (lower is better)
Translates to: SAKLLSFRSRYVISG*SLFRKQQKMNEIPR
Trigger: ACGAGGTATTTCATTCATCTTTTGCTGTTTCCGAAATAATGATCACCCAGAAATCACGTATCGGCTGCGAAATGATAGCAACTTTGCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS CCA 90 bp AAGTTTTCCAAAGGTGTGGAGTCAGGGTCCTGTCCTTTGTCATTCTaGATAACTATCTGCTGTATAATTCTATCTAGTAGTAGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: KFSKGVESGSCPLSF*ITICCIILSSSSQY
Trigger: GTACTGGCTACTACTAGATAGAATTATACAGCAGATAGTTATCCAGAATGACAAAGGACAGGACCCTGACTCCACACCTTTGGAAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCGGCAGTTTAGACCAGTaGAAGGATTTCAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAGSLDQ*KDFRAF
Trigger: AAATGCCCTGAAATCCTTCAACTGGTCTAAACTGCC...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGGTTAGAATTGCCCGTTaGATTTCGTCATTGGATAAT +
Preference number: 5 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMVRIAR*ISSLDN
Trigger: ATTATCCAATGACGAAATCAAACGGGCAATTCTAAC...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGGTTTACTTTCGCAGCTaGAGGAATATCTCGCAATTC +
Preference number: 5 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKVYFRS*RNISQF
Trigger: GAATTGCGAGATATTCCTCAAGCTGCGAAAGTAAAC...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGAAAGAACTCATCTGGTaGTATTTTGCCAGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKKELIW*YFASLF
Trigger: GAAGAGGCTGGCAAAATACAACCAGATGAGTTCTTT...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp CTTCCTCATCTCCAAGCCTTTTTGAGCCAAGTCTCTATCTGCACCTTTAACATGTGGTTGGTAATACGTTaGCGATTCCGTTTCAATTTA +
Preference number: 5 (lower is better)
Translates to: LPHLQAFLSQVSICTFNMWLVIR*RFRFNL
Trigger: TAAATTGAAACGGAATCGCAAACGTATTACCAACCA...CATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTATGTACAGTGCACACATaGGTATTCTATTCATCCCTT +
Preference number: 5 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLCTVHT*VFYSSL
Trigger: AAGGGATGAATAGAATACCAATGTGTGCACTGTACA...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACCATCTCCAAGCCTTTTaGAGCCAAGTCTCTATCTGC +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNHLQAF*SQVSIC
Trigger: GCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATG...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp CAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAGACAACATCCAGGGAATaGACACTGGCTACATGTAGC +
Preference number: 5 (lower is better)
Translates to: QSGFHITKSCPILVVKWKTTSRE*TLATCS
Trigger: GCTACATGTAGCCAGTGTCAATTCCCTGGATGTTGT...CTTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS GCA 90 bp AGTGAAAACTCATCAATTATGGAGCTGGCACTGATTGGAAGAAATTaGCATGATTCCAGTACTTTAGCTTGGAAAGTGAGTGTATCTGTG +
Preference number: 5 (lower is better)
Translates to: SENSSIMELALIGRN*HDSSTLAWKVSVSV
Trigger: CACAGATACACTCACTTTCCAAGCTAAAGTACTGGAATCATGGCAATTTCTTCCAATCAGTGCCAGCTCCATAATTGATGAGTTTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CCA 90 bp TATACCTTCTTCATAATGGATCTCCTTCTACTACTGTCAGATCTTTaGGGGGCAGGTTCTGGCTTTCTATTTCAAACTTCCTTGTTAACA +
Preference number: 5 (lower is better)
Translates to: YTFFIMDLLLLLSDL*GAGSGFLFQTSLLT
Trigger: TGTTAACAAGGAAGTTTGAAATAGAAAGCCAGAACCTGCCCCCCAAAGATCTGACAGTAGTAGAAGGAGATCCATTATGAAGAAGGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS-3UTR CAA 90 bp TCAATCTGGTTTTCATATTACAAAGAGCTGTCCAATTCTAGTGGTGAAATGGAAATGGCTTCTCTGTGTTaGTCTGTGAGGTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: SIWFSYYKELSNSSGEMEMASLC*SVRSSS
Trigger: TGAACTGGACCTCACAGACAAACACAGAGAAGCCAT...TTCCATTTCACCACTAGAATTGGACAGCTCTTTGTAATATGAAAACCAGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556135.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATACAAACCTCATTGGTTTaGTCCTCAGTGCTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIQTSLV*SSVLSL
Trigger: TAAAGACAGCACTGAGGACAAAACCAATGAGGTTTG...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATTTGAAGTACAGCGATaGCAACCTTTGCTGATAGTG +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIFEVQR*QPLLIV
Trigger: CACTATCAGCAAAGGTTGCAATCGCTGTACTTCAAA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGTCTGCAAACTTCTTTTaGAAGTACAGCGATTGCAAC +
Preference number: 5 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKSANFF*KYSDCN
Trigger: GTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGA...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCAAAGAACTCATCTGGTaGTATTTTGCCAGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQAKELIW*YFASLF
Trigger: GAAGAGGCTGGCAAAATACAACCAGATGAGTTCTTT...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGCAGTGTAATGAAACGTTCTAGTCACTTTAGAGGGCTGCTAATGAGCTTTCTAAATTTAGAAAGGTCTTaGTCAAACACTTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: GSVMKRSSHFRGLLMSFLNLERS*SNTSPE
Trigger: CTCAGGAGAAGTGTTTGACAAAGACCTTTCTAAATT...TAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGCTTGGCAGAGATAACTaGATGAAATCAGGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKLGRDN*MKSGEK
Trigger: TTTTTCCCCTGATTTCATCAAGTTATCTCTGCCAAG...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATTTAACATGGTGTTATaGCAGACCTGGGTTAACTCG +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIFNMVL*QTWVNS
Trigger: CGAGTTAACCCAGGTCTGCAATAACACCATGTTAAA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCTATCTAACAACAGTCTaGCACCTAAAGACTAAGTGG +
Preference number: 5 (lower is better)
Translates to: FSTMAHGITCTQFSGKETYLTTV*HLKTKW
Trigger: CCACTTAGTCTTTAGGTGCAAGACTGTTGTTAGATA...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 90 bp AAATTAAGTTTTGTGATTGGTCTCTCTCTGCTGCTGTCAGTCATCTaGTTGGTAATACGTTTGCGATTCCGTTTCAATTTAGAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: KLSFVIGLSLLLSVI*LVIRLRFRFNLERS
Trigger: AGACCTTTCTAAATTGAAACGGAATCGCAAACGTATTACCAACCAGATGACTGACAGCAGCAGAGAGAGACCAATCACAAAACTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATCCTGGTCCTTTTTCTaGCTACAGTATATTTGCCAT +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIISWSFF*LQYICH
Trigger: ATGGCAAATATACTGTAGCAAGAAAAAGGACCAGGA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATGGTTACAAACCTCATaGGTTTTGTCCTCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSWLQTS*VLSSVL
Trigger: CAGCACTGAGGACAAAACCAATGAGGTTTGTAACCA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATCTGAGTTGCACTTTTaGTGTCTATGTGAACCAGTT +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIISELHF*CLCEPV
Trigger: AACTGGTTCACATAGACACAAAAAGTGCAACTCAGA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGCGTTTGATTTCGTCATaGGATAATTTCAACCTCGAT +
Preference number: 5 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKRLISS*DNFNLD
Trigger: ATCGAGGTTGAAATTATCCAATGACGAAATCAAACG...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACTTTGAAGTACAGCGATaGCAACCTTTGCTGATAGTG +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNFEVQR*QPLLIV
Trigger: CACTATCAGCAAAGGTTGCAATCGCTGTACTTCAAA...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACGTTTACTTTCGCAGCTaGAGGAATATCTCGCAATTC +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNVYFRS*RNISQF
Trigger: GAATTGCGAGATATTCCTCAAGCTGCGAAAGTAAAC...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ACAAACTTGCTCCTTTATGTGACTTTCCCTCCACCTGTCTATTCCTTAAACTGTAAGGTACTTATTTCTTaGTCCAGCTCAGTCATGTTT +
Preference number: 5 (lower is better)
Translates to: TNLLLYVTFPPPVYSLNCKVLIS*SSSVMF
Trigger: AAACATGACTGAGCTGGACAAAGAAATAAGTACCTT...ACAGTTTAAGGAATAGACAGGTGGAGGGAAAGTCACATAAAGGAGCAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp AATACACACCCAAGAGAGAAAAGTGGCTACTTACACCAGCACCAATCTAAAAAGAAGGTACTTATTTCTTaGTCCAGCTCAGTCATGTTT +
Preference number: 5 (lower is better)
Translates to: NTHPREKSGYLHQHQSKKKVLIS*SSSVMF
Trigger: AAACATGACTGAGCTGGACAAAGAAATAAGTACCTT...CTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp TTTTCAACAATGGCACATGGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCAATTTAGAAAGGTCTTaGTCAAACACTTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: FSTMAHGITCTQFSGKETNLERS*SNTSPE
Trigger: CTCAGGAGAAGTGTTTGACAAAGACCTTTCTAAATT...GGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCACTGTCAGTCATCTGGTaGGTAATACGTTTGCGATTC +
Preference number: 5 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSLSVIW*VIRLRF
Trigger: GAATCGCAAACGTATTACCAACCAGATGACTGACAG...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCCTTGGCAGAGATAACTaGATGAAATCAGGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQALGRDN*MKSGEK
Trigger: TTTTTCCCCTGATTTCATCAAGTTATCTCTGCCAAG...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATAGCATCTCTGCTGATGTaGACATTTTGTGCATTCTTT +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIIASLLM*TFCAFF
Trigger: AAAGAATGCACAAAATGTCAACATCAGCAGAGATGC...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp ATTTCACAGCTTTCACATAGCACAGATAACTCGCCATCTGTGCTAAGCATTATATGTACAGTGCACACATaGGTATTCTATTCATCCCTT +
Preference number: 5 (lower is better)
Translates to: ISQLSHSTDNSPSVLSIICTVHT*VFYSSL
Trigger: AAGGGATGAATAGAATACCAATGTGTGCACTGTACA...TATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGAAAGCTGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 90 bp TTCTGCTTTATAAATGAATTCTGGTCTATAAGAGTTGGAGTGACATaGTCAGTTCAGATATTAACCAAGGAGAACACTAACGCAGCTTAC +
Preference number: 5 (lower is better)
Translates to: FCFINEFWSIRVGVT*SVQILTKENTNAAY
Trigger: GTAAGCTGCGTTAGTGTTCTCCTTGGTTAATATCTGAACTGACCATGTCACTCCAACTCTTATAGACCAGAATTCATTTATAAAGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS-3UTR CAA 90 bp GTATCCTTTAGTCCAGACCTATATTTACAGAAAATGCAGCTTGTCCTACAAAACTCCTGGTCCTTTTTCTaGCTACAGTATATTTGCCAT +
Preference number: 5 (lower is better)
Translates to: VSFSPDLYLQKMQLVLQNSWSFF*LQYICH
Trigger: ATGGCAAATATACTGTAGCAAGAAAAAGGACCAGGA...GTTTTGTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GTTAAGGAACAGACAAAACCATCATTATATTCCAATCTTCCTCATCTCCAAGCCCGTTTGATTTCGTCATaGGATAATTTCAACCTCGAT +
Preference number: 5 (lower is better)
Translates to: VKEQTKPSLYSNLPHLQARLISS*DNFNLD
Trigger: ATCGAGGTTGAAATTATCCAATGACGAAATCAAACG...GGCTTGGAGATGAGGAAGATTGGAATATAATGATGGTTTTGTCTGTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATCTGCTTCTTTCTGCTaGGAGTTACTGTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSSASFC*ELLFTK
Trigger: CTTTGTGAACAGTAACTCCAAGCAGAAAGAAGCAGA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395125.1
CDS-3UTR CAA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATCTGCAAACTTCTTTTaGAAGTACAGCGATTGCAAC +
Preference number: 5 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSSANFF*KYSDCN
Trigger: GTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATCTTCTGTTTTGCCTTaGAATCTAGGGAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSSSVLP*NLGNVS
Trigger: AGAGACATTCCCTAGATTCAAAGGCAAAACAGAAGA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS-3UTR CAA 90 bp GGTCCTATTACTGATGTGATACATCAACATCACAATGTCAGCTATCAAAAATCATATCTAACAACAGTCTaGCACCTAAAGACTAAGTGG +
Preference number: 5 (lower is better)
Translates to: GPITDVIHQHHNVSYQKSYLTTV*HLKTKW
Trigger: CCACTTAGTCTTTAGGTGCAAGACTGTTGTTAGATA...TGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 90 bp AACCTCTCTCATATTGGCTTATCTTTCTGCTTTATAAATGAATTCTaGTCTATAAGAGTTGGAGTGACATGGTCAGTTCAGATATTAACC +
Preference number: 5 (lower is better)
Translates to: NLSHIGLSFCFINEF*SIRVGVTWSVQILT
Trigger: GGTTAATATCTGAACTGACCATGTCACTCCAACTCTTATAGACCAGAATTCATTTATAAAGCAGAAAGATAAGCCAATATGAGAGAGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS TCA 72 bp CCCTCCTGGTGCTCCAGGCGAGGGTCCACCTGGGATTaGAGCACAGACGGCCCTCCTGCTGAGCTCATGGAG +
Preference number: 6 (lower is better)
Translates to: PSWCSRRGSTWD*STDGPPAELME
Trigger: CTCCATGAGCTCAGCAGGAGGGCCGTCTGTGCTTCAATCCCAGGTGGACCCTCGCCTGGAGCACCAGGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 72 bp TCAGTGCTAGGCCCATTGGAGCACCAGGAGGTGGCATaGTTGCCCCTAAGGGAGGAGGCCCTGGGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SVLGPLEHQEVA*LPLREEALGEE
Trigger: CTCCTCCCCCAGGGCCTCCTCCCTTAGGGGCAATCATGCCACCTCCTGGTGCTCCAATGGGCCTAGCACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 72 bp GGGATTGAAGCACAGACGGCCCTCCTGCTGAGCTCATaGAGCTGTGCTGTGAGGTCCGCCACCTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: GIEAQTALLLSS*SCAVRSATCCL
Trigger: CAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATGAGCTCAGCAGGAGGGCCGTCTGTGCTTCAATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS GCA 72 bp AGCACAGACGGCCCTCCTGCTGAGCTCATGGAGCTGTaGTGTGAGGTCCGCCACCTGCTGCTTGACTTGCTT +
Preference number: 6 (lower is better)
Translates to: STDGPPAELMEL*CEVRHLLLDLL
Trigger: AAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATGAGCTCAGCAGGAGGGCCGTCTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 72 bp GCTCCTCCACAGGGGGCATGGGCAATGCTGGTTCCATaGTCTGAAGCGCAAAGTTGCTATCATTTCGCAGCC +
Preference number: 6 (lower is better)
Translates to: APPQGAWAMLVP*SEAQSCYHFAA
Trigger: GGCTGCGAAATGATAGCAACTTTGCGCTTCAGACCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS TCA 72 bp AGCTCCTCCATGGGCTACACCTGGTCAGTAGCATGCTaGAGCACTGTGGAGGGCACGTGGCTAAGAGGAAAA +
Preference number: 6 (lower is better)
Translates to: SSSMGYTWSVAC*STVEGTWLRGK
Trigger: TTTTCCTCTTAGCCACGTGCCCTCCACAGTGCTTCAGCATGCTACTGACCAGGTGTAGCCCATGGAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS GCA 72 bp CATGACATCCAGCTCCTCCACAGGGGGCATGGGCAATaGTGGTTCCATGGTCTGAAGCGCAAAGTTGCTATC +
Preference number: 6 (lower is better)
Translates to: HDIQLLHRGHGQ*WFHGLKRKVAI
Trigger: GATAGCAACTTTGCGCTTCAGACCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGGAGCTGGATGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS CCA 72 bp GCATGCTGGAAAGGCGGCTCTGCACTCTGGGTACAATaGGATCCGGTTAAACAGTTTCCTTCACAGCCGCTC +
Preference number: 6 (lower is better)
Translates to: ACWKGGSALWVQ*DPVKQFPSQPL
Trigger: GAGCGGCTGTGAAGGAAACTGTTTAACCGGATCCCATTGTACCCAGAGTGCAGAGCCGCCTTTCCAGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000556596.1
CDS CCA 72 bp GCAGCCCCTGCATGCTGGAAAGGCGGCTCTGCACTCTaGGTACAATGGGATCCGGTTAAACAGTTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: AAPACWKGGSAL*VQWDPVKQFPS
Trigger: TGAAGGAAACTGTTTAACCGGATCCCATTGTACCCAGAGTGCAGAGCCGCCTTTCCAGCATGCAGGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000556596.1
CDS GCA 72 bp CTGAGCTCATGGAGCTGTGCTGTGAGGTCCGCCACCTaGTGCTTGACTTGCTTATGCTCAGTAGTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: LSSWSCAVRSAT*CLTCLCSVVSF
Trigger: AAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATGAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CCA 72 bp GACATCCAGCTCCTCCACAGGGGGCATGGGCAATGCTaGTTCCATGGTCTGAAGCGCAAAGTTGCTATCATT +
Preference number: 6 (lower is better)
Translates to: DIQLLHRGHGQC*FHGLKRKVAII
Trigger: AATGATAGCAACTTTGCGCTTCAGACCATGGAACCAGCATTGCCCATGCCCCCTGTGGAGGAGCTGGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS GCA 72 bp AGCTCATGGAGCTGTGCTGTGAGGTCCGCCACCTGCTaGTTGACTTGCTTATGCTCAGTAGTCTCCTTTTCA +
Preference number: 6 (lower is better)
Translates to: SSWSCAVRSATC*LTCLCSVVSFS
Trigger: TGAAAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CAA 90 bp CTGCTGAGCTCATGGAGCTGTGCTGTGAGGTCCGCCACCTGCTGCTaGACTTGCTTATGCTCAGTAGTCTCCTTTTCAAGTTTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: LLSSWSCAVRSATCC*TCLCSVVSFSSFSF
Trigger: GAAAGAGAAACTTGAAAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATGAGCTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS GCA 72 bp AATCAGGTCCAGGGTCCCACCCAGAAGCCAACAGACTaGATTTTGTTCACCACTGCCCTAGAACTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: NQVQGPTQKPTD*ILFTTALELLP
Trigger: TGGCAAAAGTTCTAGGGCAGTGGTGAACAAAATGCAGTCTGTTGGCTTCTGGGTGGGACCCTGGACCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS CAA 72 bp GAGCTGTGCTGTGAGGTCCGCCACCTGCTGCTTGACTaGCTTATGCTCAGTAGTCTCCTTTTCAAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: ELCCEVRHLLLD*LMLSSLLFKFL
Trigger: GAGAAACTTGAAAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CAA 90 bp TTCTCCACTTTTCCAGACTTGACTTCAGTTGGTGTTGACAACTGCTaGCCAAGCAAACCCACTTGTGTGAGCTCCTCCATGGGCTACACC +
Preference number: 6 (lower is better)
Translates to: FSTFPDLTSVGVDNC*PSKPTCVSSSMGYT
Trigger: GGTGTAGCCCATGGAGGAGCTCACACAAGTGGGTTTGCTTGGCAAGCAGTTGTCAACACCAACTGAAGTCAAGTCTGGAAAAGTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS GCA 72 bp AGCTGTGCTGTGAGGTCCGCCACCTGCTGCTTGACTTaGTTATGCTCAGTAGTCTCCTTTTCAAGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SCAVRSATCCLT*LCSVVSFSSFS
Trigger: AGAGAAACTTGAAAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS GCA 72 bp CACAGTAGACACACAGCACAGCAAGCAATAAGCCTCTaGTGTTGCAACCACTGGGGTTTTGCTATCACAGCA +
Preference number: 6 (lower is better)
Translates to: HSRHTAQQAISL*CCNHWGFAITA
Trigger: TGCTGTGATAGCAAAACCCCAGTGGTTGCAACAGCAGAGGCTTATTGCTTGCTGTGCTGTGTGTCTACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS GCA 72 bp GTACCAGTCTCTACAGAAGAAGGATGCCTCCTTATATaGAAACTCAGGTGTGGCCATGTGATCTGCACTGGC +
Preference number: 6 (lower is better)
Translates to: VPVSTEEGCLLI*KLRCGHVICTG
Trigger: GCCAGTGCAGATCACATGGCCACACCTGAGTTTGCATATAAGGAGGCATCCTTCTTCTGTAGAGACTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CCA 72 bp CTGGCTGACAACAGACACAAACTTATCTCCGGGCTGTaGGGGCTGAGACTTCTGATATTCCAGCTCCTTAAA +
Preference number: 6 (lower is better)
Translates to: LADNRHKLISGL*GLRLLIFQLLK
Trigger: TTTAAGGAGCTGGAATATCAGAAGTCTCAGCCCCCACAGCCCGGAGATAAGTTTGTGTCTGTTGTCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CCA 72 bp CTGGCTGACAACAGACACAAACTTATCTCCGGGCTGTaGGGGCTGAGACTTCTGATATTCCAGCTCTTTACT +
Preference number: 6 (lower is better)
Translates to: LADNRHKLISGL*GLRLLIFQLFT
Trigger: AGTAAAGAGCTGGAATATCAGAAGTCTCAGCCCCCACAGCCCGGAGATAAGTTTGTGTCTGTTGTCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553966.5
CDS CAA 72 bp GTCCAGGGTCCCACCCAGAAGCCAACAGACTGCATTTaGTTCACCACTGCCCTAGAACTTTTGCCAAATAAG +
Preference number: 6 (lower is better)
Translates to: VQGPTQKPTDCI*FTTALELLPNK
Trigger: CTTATTTGGCAAAAGTTCTAGGGCAGTGGTGAACAAAATGCAGTCTGTTGGCTTCTGGGTGGGACCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS CAA 90 bp GGAAATCAGGTCCAGGGTCCCACCCAGAAGCCAACAGACTGCATTTaGTTCACCACTGCCCTAGAACTTTTGCCAAATAAGTCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: GNQVQGPTQKPTDCI*FTTALELLPNKSSF
Trigger: AAAGGAGGACTTATTTGGCAAAAGTTCTAGGGCAGTGGTGAACAAAATGCAGTCTGTTGGCTTCTGGGTGGGACCCTGGACCTGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS TCA 72 bp CAACTGCTTGAGGGCACCACTCCTAAACACCTCTTCTaGGCCAGAACGAATTGCTTCCACTTTAGGTTTCAC +
Preference number: 6 (lower is better)
Translates to: QLLEGTTPKHLF*ARTNCFHFRFH
Trigger: GTGAAACCTAAAGTGGAAGCAATTCGTTCTGGCTCAGAAGAGGTGTTTAGGAGTGGTGCCCTCAAGCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS TCA 72 bp CTCATTTTACGTTCCCTTTCACGTTGTTCTTTGAGCTaGGCTTCCATGCGAGCTCGACGTTCTTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LILRSLSRCSLS*ASMRARRSSSS
Trigger: GGAGGAAGAAGAACGTCGAGCTCGCATGGAAGCTCAGCTCAAAGAACAACGTGAAAGGGAACGTAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS GCA 72 bp TGCCCTTCCTCCCACCATGCCAAAGCCATGCCCATGTaGACACGCATATTTGCAAATAGCAATTTACCAACA +
Preference number: 6 (lower is better)
Translates to: CPSSHHAKAMPM*TRIFANSNLPT
Trigger: TGTTGGTAAATTGCTATTTGCAAATATGCGTGTGCACATGGGCATGGCTTTGGCATGGTGGGAGGAAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS GCA 72 bp ACTTTTCCAGACTTGACTTCAGTTGGTGTTGACAACTaGTTGCCAAGCAAACCCACTTGTGTGAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TFPDLTSVGVDN*LPSKPTCVSSS
Trigger: GGAGGAGCTCACACAAGTGGGTTTGCTTGGCAAGCAGTTGTCAACACCAACTGAAGTCAAGTCTGGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS CAA 72 bp TTTCCAGACTTGACTTCAGTTGGTGTTGACAACTGCTaGCCAAGCAAACCCACTTGTGTGAGCTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: FPDLTSVGVDNC*PSKPTCVSSSM
Trigger: CATGGAGGAGCTCACACAAGTGGGTTTGCTTGGCAAGCAGTTGTCAACACCAACTGAAGTCAAGTCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS CAA 90 bp GAGCTCATGGAGCTGTGCTGTGAGGTCCGCCACCTGCTGCTTGACTaGCTTATGCTCAGTAGTCTCCTTTTCAAGTTTCTCTTTCATTTT +
Preference number: 6 (lower is better)
Translates to: ELMELCCEVRHLLLD*LMLSSLLFKFLFHF
Trigger: AAAATGAAAGAGAAACTTGAAAAGGAGACTACTGAGCATAAGCAAGTCAAGCAGCAGGTGGCGGACCTCACAGCACAGCTCCATGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 72 bp AAACTCAGGTGTGGCCATGTGATCTGCACTGGCCAATaGAATGTGGGCACAAGTGACACCTGTTATTTCCAA +
Preference number: 6 (lower is better)
Translates to: KLRCGHVICTGQ*NVGTSDTCYFQ
Trigger: TTGGAAATAACAGGTGTCACTTGTGCCCACATTTCATTGGCCAGTGCAGATCACATGGCCACACCTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CCA 72 bp CAGTTTATCAGTTCTGACTCAGCTCTACCACTGATTTaGTTCTTAACCATGGCATGTTGCTCTGGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: QFISSDSALPLI*FLTMACCSGPQ
Trigger: CTGAGGCCCAGAGCAACATGCCATGGTTAAGAACCAAATCAGTGGTAGAGCTGAGTCAGAACTGATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CCA 72 bp CCTGTTATTTCCAAGCATAAGCTTAGAGCCTATGAATaGTTTGCCAGGTTTGCCTTTCCTCCTCCACCCTTC +
Preference number: 6 (lower is better)
Translates to: PVISKHKLRAYE*FARFAFPPPPF
Trigger: GAAGGGTGGAGGAGGAAAGGCAAACCTGGCAAACCATTCATAGGCTCTAAGCTTATGCTTGGAAATAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CAA 72 bp TTATTTCCAAGCATAAGCTTAGAGCCTATGAATGGTTaGCCAGGTTTGCCTTTCCTCCTCCACCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: LFPSISLEPMNG*PGLPFLLHPSW
Trigger: CCAGGAAGGGTGGAGGAGGAAAGGCAAACCTGGCAAACCATTCATAGGCTCTAAGCTTATGCTTGGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CAA 72 bp GAAACCCTGCCTGTCAATGCATCATTATTGCCCTTCTaGATTGCTGTCTTGGTAGATGATTCACTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: ETLPVNASLLPF*IAVLVDDSLPL
Trigger: GAGGGGCAGTGAATCATCTACCAAGACAGCAATCAAGAAGGGCAATAATGATGCATTGACAGGCAGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CAA 90 bp TTTAAGTGGGAAACCCTGCCTGTCAATGCATCATTATTGCCCTTCTaGATTGCTGTCTTGGTAGATGATTCACTGCCCCTCCCTAGAAGA +
Preference number: 6 (lower is better)
Translates to: FKWETLPVNASLLPF*IAVLVDDSLPLPRR
Trigger: TCTTCTAGGGAGGGGCAGTGAATCATCTACCAAGACAGCAATCAAGAAGGGCAATAATGATGCATTGACAGGCAGGGTTTCCCACTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CAA 90 bp CTTCCTTCTCTAAAGCCAGCAGAGATTTTCTCCACTTTTCCAGACTaGACTTCAGTTGGTGTTGACAACTGCTTGCCAAGCAAACCCACT +
Preference number: 6 (lower is better)
Translates to: LPSLKPAEIFSTFPD*TSVGVDNCLPSKPT
Trigger: AGTGGGTTTGCTTGGCAAGCAGTTGTCAACACCAACTGAAGTCAAGTCTGGAAAAGTGGAGAAAATCTCTGCTGGCTTTAGAGAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS TCA 72 bp TTAGACCAGTTGAAGGATTTCAGGGCATTTGTGGGCTaGGGAATGCTTTTCTTCTTCAGTGCTAGGCCCATT +
Preference number: 6 (lower is better)
Translates to: LDQLKDFRAFVG*GMLFFFSARPI
Trigger: AATGGGCCTAGCACTGAAGAAGAAAAGCATTCCTCAGCCCACAAATGCCCTGAAATCCTTCAACTGGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS TCA 72 bp GGGTGCAGACATAAAGGTGAATGGGGGCCATTTCACTaGAAAGGAAAAGTCCATGTCAAACCAAACCAACTC +
Preference number: 6 (lower is better)
Translates to: GCRHKGEWGPFH*KGKVHVKPNQL
Trigger: GAGTTGGTTTGGTTTGACATGGACTTTTCCTTTTCAGTGAAATGGCCCCCATTCACCTTTATGTCTGCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS TCA 72 bp TGTGATCTGCACTGGCCAATGAAATGTGGGCACAAGTaGCACCTGTTATTTCCAAGCATAAGCTTAGAGCCT +
Preference number: 6 (lower is better)
Translates to: CDLHWPMKCGHK*HLLFPSISLEP
Trigger: AGGCTCTAAGCTTATGCTTGGAAATAACAGGTGTCACTTGTGCCCACATTTCATTGGCCAGTGCAGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS TCA 72 bp TTTCTCCACTTTTCCAGACTTGACTTCAGTTGGTGTTaGCAACTGCTTGCCAAGCAAACCCACTTGTGTGAG +
Preference number: 6 (lower is better)
Translates to: FLHFSRLDFSWC*QLLAKQTHLCE
Trigger: CTCACACAAGTGGGTTTGCTTGGCAAGCAGTTGTCAACACCAACTGAAGTCAAGTCTGGAAAAGTGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557327.1
CDS GCA 72 bp GCCAGAACGAATTGCTTCCACTTTAGGTTTCACTTCTaGCACACGCTCTGCAAACTTCTTTTTGAAGTACAG +
Preference number: 6 (lower is better)
Translates to: ARTNCFHFRFHF*HTLCKLLFEVQ
Trigger: CTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAAGTGAAACCTAAAGTGGAAGCAATTCGTTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS CCA 72 bp ACAGAAAACCAAACACCAGGTGTTCTCACTAATAAGTaGGAGCTGAATGATGAGAACACATGGACACATGGG +
Preference number: 6 (lower is better)
Translates to: TENQTPGVLTNK*ELNDENTWTHG
Trigger: CCCATGTGTCCATGTGTTCTCATCATTCAGCTCCCACTTATTAGTGAGAACACCTGGTGTTTGGTTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CAA 90 bp CTTCCTCCCACCATGCCAAAGCCATGCCCATGTGCACACGCATATTaGCAAATAGCAATTTACCAACAATCTAAGTACTTGATCTATGTG +
Preference number: 6 (lower is better)
Translates to: LPPTMPKPCPCAHAY*QIAIYQQSKYLIYV
Trigger: CACATAGATCAAGTACTTAGATTGTTGGTAAATTGCTATTTGCAAATATGCGTGTGCACATGGGCATGGCTTTGGCATGGTGGGAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS TCA 72 bp GAAGCGCAAAGTTGCTATCATTTCGCAGCCGATACGTaGTTTCTGGGTGATCATTATTTCGGAAACAGCAAA +
Preference number: 6 (lower is better)
Translates to: EAQSCYHFAADT*FLGDHYFGNSK
Trigger: TTTGCTGTTTCCGAAATAATGATCACCCAGAAATCACGTATCGGCTGCGAAATGATAGCAACTTTGCGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS TCA 72 bp GTTTCACTTCTGCCACACGCTCTGCAAACTTCTTTTTaGAGTACAGCGATTGCAACCTTTGCTGATAGTGAT +
Preference number: 6 (lower is better)
Translates to: VSLLPHALQTSF*STAIATFADSD
Trigger: ATCACTATCAGCAAAGGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAAGTGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS TCA 72 bp ACAAGCAGGAGCGTAGTCATCACAGTTTATCAGTTCTaGCTCAGCTCTACCACTGATTTGGTTCTTAACCAT +
Preference number: 6 (lower is better)
Translates to: TSRSVVITVYQF*LSSTTDLVLNH
Trigger: ATGGTTAAGAACCAAATCAGTGGTAGAGCTGAGTCAGAACTGATAAACTGTGATGACTACGCTCCTGCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS GCA 72 bp CGTCATTGGATAATTTCAACCTCGATAGAAGGATGTTaGAATTCTGAGCTCTCCGACCATCAATCACCGAAA +
Preference number: 6 (lower is better)
Translates to: RHWIISTSIEGC*NSELSDHQSPK
Trigger: TTTCGGTGATTGATGGTCGGAGAGCTCAGAATTGCAACATCCTTCTATCGAGGTTGAAATTATCCAATGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS GCA 72 bp TCATCTGGTTGTATTTTGCCAGCCTCTTCCCCAAAGTaGTTCACTGCTTTAGTAAACAGGTCTTTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SSGCILPASSPK*FTALVNRSLAS
Trigger: AGAAGCTAAAGACCTGTTTACTAAAGCAGTGAAGCACTTTGGGGAAGAGGCTGGCAAAATACAACCAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553472.1
ENST00000553966.5
ENST00000555651.1
ENST00000557029.5
ENST00000557628.5
CDS CCA 72 bp TCCATTACAAATGAGATCATGTCCTTTACAGGAACATaGATGGAGCTGGAAGCCGTTATCCTCAGCAAACTA +
Preference number: 6 (lower is better)
Translates to: SITNEIMSFTGT*MELEAVILSKL
Trigger: TAGTTTGCTGAGGATAACGGCTTCCAGCTCCATCCATGTTCCTGTAAAGGACATGATCTCATTTGTAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CAA 72 bp AAATCCCTCCACCCACTTAAAGCACAAGCAAAGCACTaGGATGTAGTAATACTACCCTCTTCTAACTCTTCC +
Preference number: 6 (lower is better)
Translates to: KSLHPLKAQAKH*DVVILPSSNSS
Trigger: GGAAGAGTTAGAAGAGGGTAGTATTACTACATCCAAGTGCTTTGCTTGTGCTTTAAGTGGGTGGAGGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS CAA 90 bp TCCTTGGGCAGATCTTCCTGTTCGTCCATTGTTAGAATTGCCCGTTaGATTTCGTCATTGGATAATTTCAACCTCGATAGAAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: SLGRSSCSSIVRIAR*ISSLDNFNLDRRML
Trigger: CAACATCCTTCTATCGAGGTTGAAATTATCCAATGACGAAATCAAACGGGCAATTCTAACAATGGACGAACAGGAAGATCTGCCCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS CAA 90 bp CACTTCTGCCACACGCTCTGCAAACTTCTTTTTGAAGTACAGCGATaGCAACCTTTGCTGATAGTGATTAATTCGGCTCATCTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: HFCHTLCKLLFEVQR*QPLLIVINSAHLKK
Trigger: CTTTTTGAGATGAGCCGAATTAATCACTATCAGCAAAGGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS TCA 72 bp GATAATTTCAACCTCGATAGAAGGATGTTGCAATTCTaGGCTCTCCGACCATCAATCACCGAAAGCTCTTTA +
Preference number: 6 (lower is better)
Translates to: DNFNLDRRMLQF*ALRPSITESSL
Trigger: TAAAGAGCTTTCGGTGATTGATGGTCGGAGAGCTCAGAATTGCAACATCCTTCTATCGAGGTTGAAATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS CCA 72 bp TTTGTGATTGGTCTCTCTCTGCTGCTGTCAGTCATCTaGTTGGTAATACGTTTGCGATTCCGTTTCAATTTA +
Preference number: 6 (lower is better)
Translates to: FVIGLSLLLSVI*LVIRLRFRFNL
Trigger: TAAATTGAAACGGAATCGCAAACGTATTACCAACCAGATGACTGACAGCAGCAGAGAGAGACCAATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS CAA 72 bp CGACCATCAATCACCGAAAGCTCTTTAACTTTAAGTTaGGAACTCAGAGTGTCATCAATGGCATCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RPSITESSLTLS*ELRVSSMASAS
Trigger: AGAAGCAGATGCCATTGATGACACTCTGAGTTCCAAACTTAAAGTTAAAGAGCTTTCGGTGATTGATGGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS CAA 72 bp TCAGGAACAAATTTCAAGAGCTGTTCCAACATGTCCTaGGGCAGATCTTCCTGTTCGTCCATTGTTAGAATT +
Preference number: 6 (lower is better)
Translates to: SGTNFKSCSNMS*GRSSCSSIVRI
Trigger: AATTCTAACAATGGACGAACAGGAAGATCTGCCCAAGGACATGTTGGAACAGCTCTTGAAATTTGTTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553966.5
ENST00000554459.5
CDS CAA 72 bp CACACGCTCTGCAAACTTCTTTTTGAAGTACAGCGATaGCAACCTTTGCTGATAGTGATTAATTCGGCTCAT +
Preference number: 6 (lower is better)
Translates to: HTLCKLLFEVQR*QPLLIVINSAH
Trigger: ATGAGCCGAATTAATCACTATCAGCAAAGGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553966.5
ENST00000554459.5
CDS CAA 72 bp TCTCTGCTGCTGTCAGTCATCTGGTTGGTAATACGTTaGCGATTCCGTTTCAATTTAGAAAGGTCTTTGTCA +
Preference number: 6 (lower is better)
Translates to: SLLLSVIWLVIR*RFRFNLERSLS
Trigger: TGACAAAGACCTTTCTAAATTGAAACGGAATCGCAAACGTATTACCAACCAGATGACTGACAGCAGCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS CAA 72 bp ATTGACTTAAACTGGATTCTCCCTTATTTTCTTGCATaGGCAGAGATCTTCACAAGCAGGAGCGTAGTCATC +
Preference number: 6 (lower is better)
Translates to: IDLNWILPYFLA*AEIFTSRSVVI
Trigger: GATGACTACGCTCCTGCTTGTGAAGATCTCTGCCAATGCAAGAAAATAAGGGAGAATCCAGTTTAAGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CAA 72 bp ACCATGCCAAAGCCATGCCCATGTGCACACGCATATTaGCAAATAGCAATTTACCAACAATCTAAGTACTTG +
Preference number: 6 (lower is better)
Translates to: TMPKPCPCAHAY*QIAIYQQSKYL
Trigger: CAAGTACTTAGATTGTTGGTAAATTGCTATTTGCAAATATGCGTGTGCACATGGGCATGGCTTTGGCATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CAA 90 bp ATTGGTCTCTCTCTGCTGCTGTCAGTCATCTGGTTGGTAATACGTTaGCGATTCCGTTTCAATTTAGAAAGGTCTTTGTCAAACACTTCT +
Preference number: 6 (lower is better)
Translates to: IGLSLLLSVIWLVIR*RFRFNLERSLSNTS
Trigger: AGAAGTGTTTGACAAAGACCTTTCTAAATTGAAACGGAATCGCAAACGTATTACCAACCAGATGACTGACAGCAGCAGAGAGAGACCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS CAA 90 bp TCCAAATGCCACACGCTCTGCAAACTTCTTTTTGAAGTACAGCGATaGCAACCTTTGCTGATAGTGATTAATTCGGCTCATCTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: SKCHTLCKLLFEVQR*QPLLIVINSAHLKK
Trigger: CTTTTTGAGATGAGCCGAATTAATCACTATCAGCAAAGGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCATTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553966.5
CDS CAA 90 bp TGGTTGGTAATACGTTTGCGATTCCGTTTCAATTTAGAAAGGTCTTaGTCAAACACTTCTCCTGAGCGTAAAGCTGAAACAAGGTCATCA +
Preference number: 6 (lower is better)
Translates to: WLVIRLRFRFNLERS*SNTSPERKAETRSS
Trigger: TGATGACCTTGTTTCAGCTTTACGCTCAGGAGAAGTGTTTGACAAAGACCTTTCTAAATTGAAACGGAATCGCAAACGTATTACCAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS CAA 90 bp TTAAGTTTTGTGATTGGTCTCTCTCTGCTGCTGTCAGTCATCTGGTaGGTAATACGTTTGCGATTCCGTTTCAATTTAGAAAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LSFVIGLSLLLSVIW*VIRLRFRFNLERSL
Trigger: CAAAGACCTTTCTAAATTGAAACGGAATCGCAAACGTATTACCAACCAGATGACTGACAGCAGCAGAGAGAGACCAATCACAAAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS TCA 72 bp AACTTAAGATGCAGTACTGCCACATATTTGAAGAACTaGAGGTCTAAATCCCTCCACCCACTTAAAGCACAA +
Preference number: 6 (lower is better)
Translates to: NLRCSTATYLKN*RSKSLHPLKAQ
Trigger: TTGTGCTTTAAGTGGGTGGAGGGATTTAGACCTTCAGTTCTTCAAATATGTGGCAGTACTGCATCTTAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS TCA 72 bp AATTTCCAAATGCCACACGCTCTGCAAACTTCTTTTTaGAGTACAGCGATTGCAACCTTTGCTGATAGTGAT +
Preference number: 6 (lower is better)
Translates to: NFQMPHALQTSF*STAIATFADSD
Trigger: ATCACTATCAGCAAAGGTTGCAATCGCTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCATTTGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553966.5
CDS CAA 72 bp AAGTTTTCCAAAGGTGTGGAGTCAGGGTCCTGTCCTTaGTCATTCTGGATAACTATCTGCTGTATAATTCTA +
Preference number: 6 (lower is better)
Translates to: KFSKGVESGSCP*SFWITICCIIL
Trigger: TAGAATTATACAGCAGATAGTTATCCAGAATGACAAAGGACAGGACCCTGACTCCACACCTTTGGAAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CAA 90 bp TGTATACCAATTGACTTAAACTGGATTCTCCCTTATTTTCTTGCATaGGCAGAGATCTTCACAAGCAGGAGCGTAGTCATCACAGTTTAT +
Preference number: 6 (lower is better)
Translates to: CIPIDLNWILPYFLA*AEIFTSRSVVITVY
Trigger: ATAAACTGTGATGACTACGCTCCTGCTTGTGAAGATCTCTGCCAATGCAAGAAAATAAGGGAGAATCCAGTTTAAGTCAATTGGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS TCA 72 bp TTGCTATCATTTCGCAGCCGATACGTGATTTCTGGGTaGTCATTATTTCGGAAACAGCAAAAGATGAATGAA +
Preference number: 6 (lower is better)
Translates to: LLSFRSRYVISG*SLFRKQQKMNE
Trigger: TTCATTCATCTTTTGCTGTTTCCGAAATAATGATCACCCAGAAATCACGTATCGGCTGCGAAATGATAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS TCA 72 bp GATCTTCCTGTTCGTCCATTGTTAGAATTGCCCGTTTaGTTTCGTCATTGGATAATTTCAACCTCGATAGAA +
Preference number: 6 (lower is better)
Translates to: DLPVRPLLELPV*FRHWIISTSIE
Trigger: TTCTATCGAGGTTGAAATTATCCAATGACGAAATCAAACGGGCAATTCTAACAATGGACGAACAGGAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS TCA 72 bp TCTTTGTCCAGCTCAGTCATGTTTACTTTCGCAGCTTaGGGAATATCTCGCAATTCTTCATTTAGATTGAGA +
Preference number: 6 (lower is better)
Translates to: SLSSSVMFTFAA*GISRNSSFRLR
Trigger: TCTCAATCTAAATGAAGAATTGCGAGATATTCCTCAAGCTGCGAAAGTAAACATGACTGAGCTGGACAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000557029.5
ENST00000557628.5
CDS CCA 72 bp AAAGTTGCTATCATTTCGCAGCCGATACGTGATTTCTaGGTGATCATTATTTCGGAAACAGCAAAAGATGAA +
Preference number: 6 (lower is better)
Translates to: KVAIISQPIRDF*VIIISETAKDE
Trigger: TTCATCTTTTGCTGTTTCCGAAATAATGATCACCCAGAAATCACGTATCGGCTGCGAAATGATAGCAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000556135.1
ENST00000556596.1
CDS CAA 72 bp TCGTCCATTGTTAGAATTGCCCGTTTGATTTCGTCATaGGATAATTTCAACCTCGATAGAAGGATGTTGCAA +
Preference number: 6 (lower is better)
Translates to: SSIVRIARLISS*DNFNLDRRMLQ
Trigger: TTGCAACATCCTTCTATCGAGGTTGAAATTATCCAATGACGAAATCAAACGGGCAATTCTAACAATGGACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS CAA 72 bp AGATCTTCCTGTTCGTCCATTGTTAGAATTGCCCGTTaGATTTCGTCATTGGATAATTTCAACCTCGATAGA +
Preference number: 6 (lower is better)
Translates to: RSSCSSIVRIAR*ISSLDNFNLDR
Trigger: TCTATCGAGGTTGAAATTATCCAATGACGAAATCAAACGGGCAATTCTAACAATGGACGAACAGGAAGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000554459.5
CDS CAA 72 bp ATACGTTTGCGATTCCGTTTCAATTTAGAAAGGTCTTaGTCAAACACTTCTCCTGAGCGTAAAGCTGAAACA +
Preference number: 6 (lower is better)
Translates to: IRLRFRFNLERS*SNTSPERKAET
Trigger: TGTTTCAGCTTTACGCTCAGGAGAAGTGTTTGACAAAGACCTTTCTAAATTGAAACGGAATCGCAAACGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360909.8
ENST00000395125.1
ENST00000553307.5
ENST00000553966.5
ENST00000555651.1
CDS TCA 72 bp AGACTTCTGATATTCCAGCTCTTTACTTTCGCAGCTTaGGGAATATCTCGCAATTCTTCATTTAGATTGAGA +
Preference number: 6 (lower is better)
Translates to: RLLIFQLFTFAA*GISRNSSFRLR
Trigger: TCTCAATCTAAATGAAGAATTGCGAGATATTCCTCAAGCTGCGAAAGTAAAGAGCTGGAATATCAGAAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553966.5
CDS CAA 72 bp GGTTTTTGTGAACAGGCCTGTAGGGGAATTAGTCTCTaGTTAATTATCCATATTTCCATTATCACAGCAATG +
Preference number: 6 (lower is better)
Translates to: GFCEQACRGISL*LIIHISIITAM
Trigger: CATTGCTGTGATAATGGAAATATGGATAATTAACAAGAGACTAATTCCCCTACAGGCCTGTTCACAAAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CAA 90 bp TACCATATTGGTTTTTGTGAACAGGCCTGTAGGGGAATTAGTCTCTaGTTAATTATCCATATTTCCATTATCACAGCAATGAACGCAGAT +
Preference number: 6 (lower is better)
Translates to: YHIGFCEQACRGISL*LIIHISIITAMNAD
Trigger: ATCTGCGTTCATTGCTGTGATAATGGAAATATGGATAATTAACAAGAGACTAATTCCCCTACAGGCCTGTTCACAAAAACCAATATGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CAA 90 bp TTAATATTAAAGTTTTCCAAAGGTGTGGAGTCAGGGTCCTGTCCTTaGTCATTCTGGATAACTATCTGCTGTATAATTCTATCTAGTAGT +
Preference number: 6 (lower is better)
Translates to: LILKFSKGVESGSCP*SFWITICCIILSSS
Trigger: ACTACTAGATAGAATTATACAGCAGATAGTTATCCAGAATGACAAAGGACAGGACCCTGACTCCACACCTTTGGAAAACTTTAATATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360909.8
ENST00000395125.1
CDS CAA 90 bp GCACACGCATATTTGCAAATAGCAATTTACCAACAATCTAAGTACTaGATCTATGTGATTTCTCTTTCAGGCTTTAGAAAGCAAGCAGAT +
Preference number: 6 (lower is better)
Translates to: AHAYLQIAIYQQSKY*IYVISLSGFRKQAD
Trigger: ATCTGCTTGCTTTCTAAAGCCTGAAAGAGAAATCACATAGATCAAGTACTTAGATTGTTGGTAAATTGCTATTTGCAAATATGCGTGTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1
CDS CCA 72 bp ATAAATGAATTCTGGTCTATAAGAGTTGGAGTGACATaGTCAGTTCAGATATTAACCAAGGAGAACACTAAC +
Preference number: 6 (lower is better)
Translates to: INEFWSIRVGVT*SVQILTKENTN
Trigger: GTTAGTGTTCTCCTTGGTTAATATCTGAACTGACCATGTCACTCCAACTCTTATAGACCAGAATTCATTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556596.1
CDS TCA 72 bp GATGCACATTCTTATTTAAAGTTCACAACATCCCTATaGGTGAGGGATCACTATTCCCATTATACAAACATA +
Preference number: 6 (lower is better)
Translates to: DAHSYLKFTTSL*VRDHYSHYTNI
Trigger: TATGTTTGTATAATGGGAATAGTGATCCCTCACTCATAGGGATGTTGTGAACTTTAAATAAGAATGTGCATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555651.1