RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for D2HGDH (Homo sapiens)

Ensembl gene IDs: ENSG00000180902

Ensembl transcript IDs: ENST00000321264.9, ENST00000400769.6, ENST00000403782.5, ENST00000417686.1, ENST00000432449.1, ENST00000436747.5, ENST00000437164.1, ENST00000454048.1, ENST00000463932.1, ENST00000467427.5, ENST00000470343.5, ENST00000473126.1, ENST00000486953.5, ENST00000496252.5

Found 613 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTaGCAGCAGCAGGAGTGGCCGTCAGGCCTGGCTGGGCAGCGTCTT +
Preference number: 1 (lower is better)
Translates to: ATPPPESHPPTPSGP*QQQEWPSGLAGQRL
Trigger: AAGACGCTGCCCAGCCAGGCCTGACGGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR GCA 90 bp GAGGCGAGTGACTCCTGTCTGAGACCTGGAGTGCGAAGAGCAGGATaGGGCAGCCGGGCTGGCCTCGGGCTCCCAGGACCACAGGCGGGC +
Preference number: 1 (lower is better)
Translates to: EASDSCLRPGVRRAG*GSRAGLGLPGPQAG
Trigger: GCCCGCCTGTGGTCCTGGGAGCCCGAGGCCAGCCCGGCTGCCGCATCCTGCTCTTCGCACTCCAGGTCTCAGACAGGAGTCACTCGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 90 bp GTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGG +
Preference number: 1 (lower is better)
Translates to: VHPAASPSPSAAQGS*RAETHSAVALVRAG
Trigger: CCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR TCA 90 bp CGGCTTAGACGTGGGCGTGGCACGAAGAGGCGAGTGACTCCTGTCTaGGACCTGGAGTGCGAAGAGCAGGATGCGGCAGCCGGGCTGGCC +
Preference number: 1 (lower is better)
Translates to: RLRRGRGTKRRVTPV*DLECEEQDAAAGLA
Trigger: GGCCAGCCCGGCTGCCGCATCCTGCTCTTCGCACTCCAGGTCTCAGACAGGAGTCACTCGCCTCTTCGTGCCACGCCCACGTCTAAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp GTCCAGCAGGGCCTTGAGCTGCTGCATGAGCTGCAGGGCCCCCGGTaGCTTGCTGTAGCCCAGGACGTCCCTCTTCCTGAAGCCCACTCC +
Preference number: 1 (lower is better)
Translates to: VQQGLELLHELQGPR*LAVAQDVPLPEAHS
Trigger: GGAGTGGGCTTCAGGAAGAGGGACGTCCTGGGCTACAGCAAGCCACCGGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCTGCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR CCA 90 bp TCCACGACAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTaGGACACCTCACAGAAGGGGGACAGCCATGACGGAAGGGGGAGG +
Preference number: 1 (lower is better)
Translates to: STTAPSTLGLRQSGG*DTSQKGDSHDGRGR
Trigger: CCTCCCCCTTCCGTCATGGCTGTCCCCCTTCTGTGAGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTGTCGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp GGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGGCGCGCAGGTCAGTCACGATGTCGT +
Preference number: 1 (lower is better)
Translates to: GAGYHLQGGHSPPRA*RAGRGGRAGQSRCR
Trigger: ACGACATCGTGACTGACCTGCGCGCCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACCTGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp GGGCAGCTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTaGCGGGGCCCTCGCCCGCAGCACCGCACGTTCTTTGTAGGAGCA +
Preference number: 1 (lower is better)
Translates to: GQLTSRNTLCSGPCP*RGPRPQHRTFFVGA
Trigger: TGCTCCTACAAAGAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR GCA 90 bp GAGCACCTCAAGGCCTGTGACCCGAGCACCATGTCGGGGTGTGGCTaGAGACGCGTAGAGGGCTGGGGTGTGGGAGGTGGTGGTGGTGTT +
Preference number: 1 (lower is better)
Translates to: EHLKACDPSTMSGCG*RRVEGWGVGGGGGV
Trigger: AACACCACCACCACCTCCCACACCCCAGCCCTCTACGCGTCTGCAGCCACACCCCGACATGGTGCTCGGGTCACAGGCCTTGAGGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp CTGCACTCAGGACCTCATCCAACAGGCGTGTTAGTGCTCCAGGGTTaGTGGGGGCTACCAGTGAGGCCGCTGCCCTGGGGAAGCCGACCC +
Preference number: 1 (lower is better)
Translates to: LHSGPHPTGVLVLQG*WGLPVRPLPWGSRP
Trigger: GGGTCGGCTTCCCCAGGGCAGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGATGAGGTCCTGAGTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 90 bp AAGGTCTCACAGGCGCAGAGGCTGGGGGCAGACACCTGCACTGGGTaGCACAGGAGCACCTCAAGGCCTGTGACCCGAGCACCATGTCGG +
Preference number: 1 (lower is better)
Translates to: KVSQAQRLGADTCTG*HRSTSRPVTRAPCR
Trigger: CCGACATGGTGCTCGGGTCACAGGCCTTGAGGTGCTCCTGTGTCACCCAGTGCAGGTGTCTGCCCCCAGCCTCTGCGCCTGTGAGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp CACTCAGGACCTCATCCAACAGGCGTGTTAGTGCTCCAGGGTTGGTaGGGGCTACCAGTGAGGCCGCTGCCCTGGGGAAGCCGACCCTCA +
Preference number: 1 (lower is better)
Translates to: HSGPHPTGVLVLQGW*GLPVRPLPWGSRPS
Trigger: TGAGGGTCGGCTTCCCCAGGGCAGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGATGAGGTCCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 90 bp CCTGTTCCACCCGGCTTAGACGTGGGCGTGGCACGAAGAGGCGAGTaGCTCCTGTCTGAGACCTGGAGTGCGAAGAGCAGGATGCGGCAG +
Preference number: 1 (lower is better)
Translates to: PVPPGLDVGVARRGE*LLSETWSAKSRMRQ
Trigger: CTGCCGCATCCTGCTCTTCGCACTCCAGGTCTCAGACAGGAGTCACTCGCCTCTTCGTGCCACGCCCACGTCTAAGCCGGGTGGAACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp AGAGAAGGTCTCACAGGCGCAGAGGCTGGGGGCAGACACCTGCACTaGGTGACACAGGAGCACCTCAAGGCCTGTGACCCGAGCACCATG +
Preference number: 1 (lower is better)
Translates to: REGLTGAEAGGRHLH*VTQEHLKACDPSTM
Trigger: CATGGTGCTCGGGTCACAGGCCTTGAGGTGCTCCTGTGTCACCCAGTGCAGGTGTCTGCCCCCAGCCTCTGCGCCTGTGAGACCTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp GGGGCTACCAGTGAGGCCGCTGCCCTGGGGAAGCCGACCCTCAAGTaGAAAGATGGAAAGGAACTGAGTGGAGATGTCTGCAGGCGGGCA +
Preference number: 1 (lower is better)
Translates to: GATSEAAALGKPTLK*KDGKELSGDVCRRA
Trigger: TGCCCGCCTGCAGACATCTCCACTCAGTTCCTTTCCATCTTTGCACTTGAGGGTCGGCTTCCCCAGGGCAGCGGCCTCACTGGTAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTaGCCAGGGCAGCTGACGAGCAGAAACACACTCTGCAGTGGCCCT +
Preference number: 1 (lower is better)
Translates to: DRMRCASSCIAQPIR*PGQLTSRNTLCSGP
Trigger: AGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR TCA 90 bp CCAGGTGGAGATGGCGCCCGACCAGCTGCATGCACACAGCATCCATaGACTCGAATGCAGACAGGATCTCACCCAGCATCCCCTTGCAGG +
Preference number: 1 (lower is better)
Translates to: PGGDGARPAACTQHP*TRMQTGSHPASPCR
Trigger: CCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp GCAGACAGGATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCTAGTGTCACCACCAGC +
Preference number: 1 (lower is better)
Translates to: ADRISPSIPLQVLKV*RTSAKPGQPSVTTS
Trigger: GCTGGTGGTGACACTAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp CTCTCTTGCACCGGGCTGGCCAGGTGGAGATGGCGCCCGACCAGCTaGATGCACACAGCATCCATGAACTCGAATGCAGACAGGATCTCA +
Preference number: 1 (lower is better)
Translates to: LSCTGLARWRWRPTS*MHTASMNSNADRIS
Trigger: TGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 90 bp CAGGAAGTGGCCCAGCTTCTCAGCGTCATGGCCTGCGTTGGAGCCTaGAGTCTCGATGAGGACGTAAAACGGACTCTCTTGCACCGGGCT +
Preference number: 1 (lower is better)
Translates to: QEVAQLLSVMACVGA*SLDEDVKRTLLHRA
Trigger: AGCCCGGTGCAAGAGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCTGGGCCACTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp CACACAGGTGACGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTGCCCTC +
Preference number: 1 (lower is better)
Translates to: HTGDEESHVHSPGLG*TQDGHRGDDPQSAL
Trigger: GAGGGCACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGTCACCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp AGGAGGGGAAGGCGCCGAAGAACCACACAGCACCTGAGACGGCAGTaGGACTCAGAGGGGGCGTATCTTGGGAATTCTGCAAACACAGAG +
Preference number: 1 (lower is better)
Translates to: RRGRRRRTTQHLRRQ*DSEGAYLGNSANTE
Trigger: CTCTGTGTTTGCAGAATTCCCAAGATACGCCCCCTCTGAGTCCCACTGCCGTCTCAGGTGCTGTGTGGTTCTTCGGCGCCTTCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp ATGGCGCCCGACCAGCTGCATGCACACAGCATCCATGAACTCGAATaGAGACAGGATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGT +
Preference number: 1 (lower is better)
Translates to: MAPDQLHAHSIHELE*RQDLTQHPLAGAEG
Trigger: ACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp CGCACGTTCTTTGTAGGAGCAGAACCCGAAACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCCAGCTGGCAGCCCTCTAGAAGATGT +
Preference number: 1 (lower is better)
Translates to: RTFFVGAEPETQSTA*PDNCLPSWQPSRRC
Trigger: ACATCTTCTAGAGGGCTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTGCTCCTACAAAGAACGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR GCA 90 bp CCTAGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTaGTTCGAACTTCCATTGTGGAGATCTGTAGACTCAGCTACTCGG +
Preference number: 1 (lower is better)
Translates to: PRAQTDRPVVCVAFA*FELPLWRSVDSATR
Trigger: CCGAGTAGCTGAGTCTACAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp GTGCCCACCTTTCAGGGCGAGACAGGGAGGCAATGCAAAGGCATGTaGATATCAGAGAAGAATTTTCCAGAGAGAAGGTCTCACAGGCGC +
Preference number: 1 (lower is better)
Translates to: VPTFQGETGRQCKGM*ISEKNFPERRSHRR
Trigger: GCGCCTGTGAGACCTTCTCTCTGGAAAATTCTTCTCTGATATCCACATGCCTTTGCATTGCCTCCCTGTCTCGCCCTGAAAGGTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 90 bp GAAGCAGAACCGGGCCAAATCCTAGGGCTCAGACAGATCGGCCTGTaGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCCATTGTGGAGAT +
Preference number: 1 (lower is better)
Translates to: EAEPGQILGLRQIGL*FAWLLLASNFHCGD
Trigger: ATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGGATTTGGCCCGGTTCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 90 bp AGAACCGGGCCAAATCCTAGGGCTCAGACAGATCGGCCTGTGGTTTaGGTGGCTTTTGCTTGCTTCGAACTTCCATTGTGGAGATCTGTA +
Preference number: 1 (lower is better)
Translates to: RTGPNPRAQTDRPVV*VAFACFELPLWRSV
Trigger: TACAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGGATTTGGCCCGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCGGGCCCCCGGTGGCTTaGTGTAGCCCAGGACGTCCC +
Preference number: 2 (lower is better)
Translates to: QSHRNTPAREPPADPQWAGPPVA*CSPGRP
Trigger: GGGACGTCCTGGGCTACAGCAAGCCACCGGGGGCCC...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCGGGGCCCTGGAGAGCTaGACCGAGCCCACGAGCACG +
Preference number: 2 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSGALES*TEPTST
Trigger: CGTGCTCGTGGGCTCGGTCCAGCTCTCCAGGGCCCC...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACCGATCACGGCCCACGTaGTCCTGCCCGTGCCCCCGC +
Preference number: 2 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHRSRPT*SCPCPR
Trigger: GCGGGGGCACGGGCAGGACCACGTGGGCCGTGATCG...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGCGCTGACGCTGCCCTaGTGCCCGGCCGTCCACTCG +
Preference number: 2 (lower is better)
Translates to: SVLRADAALLPGRPLVHVALTLP*CPAVHS
Trigger: CGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGC...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGCCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWPADPQ*ALAAAG
Trigger: TCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGG...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCGCCGTCAGGCCTGGCTaGGCAGCGTCTTGTAGGGGT +
Preference number: 2 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSAVRPG*AASCRG
Trigger: ACCCCTACAAGACGCTGCCCAGCCAGGCCTGACGGC...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR TCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTGGGCCACCACGCAAGTaGGACCCACCCCGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: HSAVALVRAGALARSTARGPPRK*DPPRFH
Trigger: GTGGAAGCGGGGTGGGTCTCACTTGCGTGGTGGCCC...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACAGGGCGTCCACGGCCTaGGGGACCCGGCTCCATTCA +
Preference number: 2 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHRASTA*GTRLHS
Trigger: TGAATGGAGCCGGGTCCCTCAGGCCGTGGACGCCCT...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTCCAGGAGCGAGGGGCTaGAGGCCTCCGCCGTCACAT +
Preference number: 2 (lower is better)
Translates to: HSAVALVRAGALARSTARPGARG*RPPPSH
Trigger: ATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGG...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR GCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCGTCCCTTCAACCAGGTaGCTGGTCCCCTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSVPSTR*LVPCPL
Trigger: CAGTGGGCAGGGGACCAGGCACCTGGTTGAAGGGAC...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCCCCGCTGCCCACGCATaGCCGGGGAACGAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFPAAHA*PGNEQQ
Trigger: TTGCTGCTCGTTCCCCGGGCATGCGTGGGCAGCGGG...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp CGAGGCGGGCGCGCAGGTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGACGGTGGGCGGGCCGTaGAGGAGGAGGGACACGGCG +
Preference number: 2 (lower is better)
Translates to: RGGRAGQSRCRRAAPQGGTVGGP*RRRDTA
Trigger: CGCCGTGTCCCTCCTCCTCCACGGCCCGCCCACCGT...CCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGCCCGCCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR TCA 90 bp TCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGACGTCCCTCTTCCTaGAGCCCACTCCGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: SLRATATPPPESHPPTPSGRPSS*SPLRAP
Trigger: CGGAGCACGGAGTGGGCTTCAGGAAGAGGGACGTCC...ACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR GCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCCCACCACCCAGCGCCTaGTCCCCAGGCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPPPPSA*SPGRSR
Trigger: CCTGCTGCGGCCTGGGGAGCAGGCGCTGGGTGGTGG...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCACCACCCAGCGCCTaGTCCCCAGGCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPPPPSA*SPGRSR
Trigger: CCTGCTGCGGCCTGGGGAGCAGGCGCTGGGTGGTGG...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: SRAAALRSSRQPTITAHVSPPRA*RAGRGG
Trigger: CCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCT...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCGTCCACTCGTACACGTaGGGCTCCAGGGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFVHSYT*GSRAAR
Trigger: CCTGGCTGCCCTGGAGCCCCACGTGTACGAGTGGAC...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR TCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCGGGCCACCACGCAAGTaGGACCCACCCCGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSGPPRK*DPPRFH
Trigger: GTGGAAGCGGGGTGGGTCTCACTTGCGTGGTGGCCC...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp CCACGACAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTGGGACACCTGGCCTGGACGCTCCCTaGACCAGGGTGGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PRQHRAPWDSGNQAAGTPGLDAP*TRVGQG
Trigger: ACCCTGCCCCACCCTGGTTCAGGGAGCGTCCAGGCC...AGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTGTCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp CACCAGGCCGGAGCCCAGCGCGTGCTCCAGGAAGTGGCCCAGCTTCTCAGCGTCCTGACGCTGCCCTGCTaGCCGGCCGTCCACTCGTAC +
Preference number: 2 (lower is better)
Translates to: HQAGAQRVLQEVAQLLSVLTLPC*PAVHSY
Trigger: GTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAG...GACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGCGCTGGGCTCCGGCCTGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCCCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPPADPQ*ALAAAG
Trigger: TCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGG...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: FSRAAALRSSRQPTITAHSPPRA*RAGRGG
Trigger: CCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCT...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR TCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCGGGCCACCACGCAAGTaGGACCCACCCCGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPGPPRK*DPPRFH
Trigger: GTGGAAGCGGGGTGGGTCTCACTTGCGTGGTGGCCC...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGGGCCACCACGCAAGTaGGACCCACCCCGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHGPPRK*DPPRFH
Trigger: GTGGAAGCGGGGTGGGTCTCACTTGCGTGGTGGCCC...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCCAGGAGCGAGGGGCTaGAGGCCTCCGCCGTCACAT +
Preference number: 2 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHPGARG*RPPPSH
Trigger: ATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGG...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR TCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTGCAGCTTCAGGTCATaGCACGGCACAGAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: QSHRNTPAREPPADPQWACSFRS*HGTEWQ
Trigger: TTGCCACTCTGTGCCGTGTCATGACCTGAAGCTGCA...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTCCCGCTGCCCACGCATaGCCGGGGAACGAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SAQVLSATHDHGPRGPARPAAHA*PGNEQQ
Trigger: TTGCTGCTCGTTCCCCGGGCATGCGTGGGCAGCGGG...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACAGATGTGCATCCAGCTaGATCGCCCAGCCCATCCGC +
Preference number: 2 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHRCASS*IAQPIR
Trigger: GCGGATGGGCTGGGCGATGCAGCTGGATGCACATCT...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCTGGCAGCAGCAGGAGTaGCCGTCAGGCCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPWQQQE*PSGLAG
Trigger: CCCAGCCAGGCCTGACGGCCACTCCTGCTGCTGCCA...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR GCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCCTGAAGCCCACTCCGTaGTCCGCGCTGACGCTGCCC +
Preference number: 2 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPLKPTP*SALTLP
Trigger: GGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTTCAG...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTGCCGTCAGGCCTGGCTaGGCAGCGTCTTGTAGGGGT +
Preference number: 2 (lower is better)
Translates to: SAQVLSATHDHGPRGPARAVRPG*AASCRG
Trigger: ACCCCTACAAGACGCTGCCCAGCCAGGCCTGACGGC...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGGTGTTGGAGGGTCTaGCGGTGGGGACTGGGCATC +
Preference number: 2 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSWCWRV*RWGLGI
Trigger: GATGCCCAGTCCCCACCGCCAGACCCTCCAACACCA...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTGTGAGGCCGCTGCCCTaGGGAAGCCGACCCTCAAGT +
Preference number: 2 (lower is better)
Translates to: SAQVLSATHDHGPRGPARVRPLP*GSRPSS
Trigger: ACTTGAGGGTCGGCTTCCCCAGGGCAGCGGCCTCAC...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CAA 90 bp CTGCCCAGGGCAGCTGACGAGCAGAAACACACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCTTTGT +
Preference number: 2 (lower is better)
Translates to: LPRAADEQKHTLQWP*SVPGPSPAAPHVLC
Trigger: ACAAAGAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp CTGGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCGGAGCCCAGCGCGTGCTCTCCCCTTGCAGGTGCTaGAGGTCTGCAGAACCTCAG +
Preference number: 2 (lower is better)
Translates to: LVGGHGPIGHQAGAQRVLSPCRC*RSAEPQ
Trigger: CTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGA...GAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp CTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCGCTGCCCACGCATaGCCGGGGAACGAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LHSAEPQRSGPLGNPRSRPAAHA*PGNEQQ
Trigger: TTGCTGCTCGTTCCCCGGGCATGCGTGGGCAGCGGG...CCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: QSHRNTPAREPPADPQWATQSTA*PDNCLP
Trigger: GGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGT...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCAGCAGAAACACACTCTaGAGTGGCCCTTGTCCGTGC +
Preference number: 2 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFSRNTL*SGPCPC
Trigger: GCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCT...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp ACAGCCATGACGGAAGGGGGAGGCGCCCACCTGCAGCTTCAGGTCATGACACGGGTGCGAAGAGCAGGATaGGGCAGCCGGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: TAMTEGGGAHLQLQVMTRVRRAG*GSRAGL
Trigger: GAGGCCAGCCCGGCTGCCGCATCCTGCTCTTCGCAC...CCGTGTCATGACCTGAAGCTGCAGGTGGGCGCCTCCCCCTTCCGTCATGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCAACTGTCTTCCCAGCTaGCAGCCCTCTAGAAGATGT +
Preference number: 2 (lower is better)
Translates to: QSHRNTPAREPPADPQWANCLPS*QPSRRC
Trigger: ACATCTTCTAGAGGGCTGCCAGCTGGGAAGACAGTT...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR CAA 90 bp CCTGCACTCAGGACCTCATCCAACAGGCGTGTTAGTGCTCCAGGGTaGGTGGGGGCTACCAGTGAGGCCGCTGCCCTGGGGAAGCCGACC +
Preference number: 2 (lower is better)
Translates to: PALRTSSNRRVSAPG*VGATSEAAALGKPT
Trigger: GGTCGGCTTCCCCAGGGCAGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGATGAGGTCCTGAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR TCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCGCACGAAGAGGCGAGTaGCTCCTGTCTGAGACCTGG +
Preference number: 2 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPARRGE*LLSETW
Trigger: CCAGGTCTCAGACAGGAGTCACTCGCCTCTTCGTGC...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR TCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACATCAATCCCAGACAGTaGATGTCCCAGGCTCCACGA +
Preference number: 2 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHINPRQ*MSQAPR
Trigger: TCGTGGAGCCTGGGACATTCACTGTCTGGGATTGAT...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp ACAGCCATGACGGAAGGGGGAGGCGCCCACCTGCAGCTTCAGGTCATGACACGGAGCTGCTGCATGAGCTaGAGGGCCCCCGGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: TAMTEGGGAHLQLQVMTRSCCMS*RAPGGL
Trigger: CAAGCCACCGGGGGCCCTGCAGCTCATGCAGCAGCT...CCGTGTCATGACCTGAAGCTGCAGGTGGGCGCCTCCCCCTTCCGTCATGGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp TCCAACAGGCGTGTTAGTGCTCCAGGGTTGGTGGGGGCTACCAGTGAGGCCGCTCTGCAGGGCCCCCGGTaGCTTGCTGTAGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SNRRVSAPGLVGATSEAALQGPR*LAVAQD
Trigger: GTCCTGGGCTACAGCAAGCCACCGGGGGCCCTGCAG...AGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR TCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCT +
Preference number: 2 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRAAQGS*RAETHS
Trigger: AGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGC...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCTCCGCCGTCACATTaGGGTGCAGGTTACCATCTC +
Preference number: 2 (lower is better)
Translates to: RAAALRSSRQPTITAHVVPPPSH*GAGYHL
Trigger: GAGATGGTAACCTGCACCTCAATGTGACGGCGGAGG...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR TCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGCGAGTGACTCCTGTCTaGGACCTGGAGTGCGAAGAG +
Preference number: 2 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTRVTPV*DLECEE
Trigger: CTCTTCGCACTCCAGGTCTCAGACAGGAGTCACTCG...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGCCGTCACATTGAGGTaGAGGTTACCATCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: SVLRADAALLPGRPLVHVAVTLR*RLPSPR
Trigger: CCTTGGAGATGGTAACCTGCACCTCAATGTGACGGC...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR GCA 90 bp TCCAACAGGCGTGTTAGTGCTCCAGGGTTGGTGGGGGCTACCAGTGAGGCCGCTAGGGCCTTGAGCTGCTaGATGAGCTGCAGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: SNRRVSAPGLVGATSEAARALSC*MSCRAP
Trigger: GGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCT...AGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp CGGACTCTCTTGCACCGGGCTGGCCAGGTGGAGATGGCGCCCGACCAGCTGCATAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGT +
Preference number: 2 (lower is better)
Translates to: RTLLHRAGQVEMAPDQLHSPGLG*TQDGHR
Trigger: ACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCT...ATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGAGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp CACCAGGCCGGAGCCCAGCGCGTGCTCCAGGAAGTGGCCCAGCTTCTCAGCGTCTGGAAAGGAACTGAGTaGAGATGTCTGCAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: HQAGAQRVLQEVAQLLSVWKGTE*RCLQAG
Trigger: GCCCGCCTGCAGACATCTCCACTCAGTTCCTTTCCA...GACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGCGCTGGGCTCCGGCCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGAGACAGATCGGCCTGTaGTTTGCGTGGCTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWRQIGL*FAWLLL
Trigger: AAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCT...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR TCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCACATTCATGACAGAATaGGATGTGCATCCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFTFMTE*DVHPAA
Trigger: TGCAGCTGGATGCACATCTCATTCTGTCATGAATGT...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTTACTGGACATTCATaGCAGAATGAGATGTGCATC +
Preference number: 2 (lower is better)
Translates to: QSHRNTPAREPPADPQWAFTGHS*QNEMCI
Trigger: GATGCACATCTCATTCTGTCATGAATGTCCAGTAAA...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp CTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCTCCGCCGTCACATTaGGGTGCAGGTTACCATCTC +
Preference number: 2 (lower is better)
Translates to: LHSAEPQRSGPLGNPRSRPPPSH*GAGYHL
Trigger: GAGATGGTAACCTGCACCTCAATGTGACGGCGGAGG...CCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGCATCTTGCTCAGAGTaGGCAGGAATCCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: FSRAAALRSSRQPTITAHASCSE*AGIPRK
Trigger: CTTCCTGGGGATTCCTGCCCACTCTGAGCAAGATGC...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp CTGGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCGGAGCCCAGCGCGTGCTCAGAGGGGGCGTATCTTaGGAATTCTGCAAACACAGA +
Preference number: 2 (lower is better)
Translates to: LVGGHGPIGHQAGAQRVLRGGVS*EFCKHR
Trigger: TCTGTGTTTGCAGAATTCCCAAGATACGCCCCCTCT...GAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCCTGACGCTGCCCTGCTaGCCGGCCGTCCACTCGTAC +
Preference number: 2 (lower is better)
Translates to: QNPKLRAQLALITVFPAGLTLPC*PAVHSY
Trigger: GTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAG...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCCGATCACGGCCCACGTaGTCCTGCCCGTGCCCCCGC +
Preference number: 2 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPRSRPT*SCPCPR
Trigger: GCGGGGGCACGGGCAGGACCACGTGGGCCGTGATCG...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTACCGGGCTGGCCAGGTaGAGATGGCGCCCGACCAGC +
Preference number: 2 (lower is better)
Translates to: RAQTDRPVVCVAFACFELTGLAR*RWRPTS
Trigger: GCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGT...AAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CAA 90 bp GGCGGCACACAGGTGACGAGGAAAGCCACGTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: GGTQVTRKATFTALG*GGHKMDTVVMIPKV
Trigger: CACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGTCACCTGTGTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCCCACCACCCAGCGCCTaGTCCCCAGGCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPPPPSA*SPGRSR
Trigger: CCTGCTGCGGCCTGGGGAGCAGGCGCTGGGTGGTGG...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGAGCAGAAACACACTCTaGAGTGGCCCTTGTCCGTGC +
Preference number: 2 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGSRNTL*SGPCPC
Trigger: GCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCT...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGGGCCTTGAGCTGCTaGATGAGCTGCAGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: QNPKLRAQLALITVFPAGRALSC*MSCRAP
Trigger: GGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCT...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCTGCAGGGCCCCCGGTaGCTTGCTGTAGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LDIHDRMRCASSCIAQPILQGPR*LAVAQD
Trigger: GTCCTGGGCTACAGCAAGCCACCGGGGGCCCTGCAG...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR GCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCGTCCCTTCAACCAGGTaGCTGGTCCCCTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: QNPKLRAQLALITVFPAGVPSTR*LVPCPL
Trigger: CAGTGGGCAGGGGACCAGGCACCTGGTTGAAGGGAC...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp TCTGAGGAGGAGCAGACGGTGCTGGTGGCTGAAGCAGAACCGGGCCAAATCCTAGGGGACTGGGCATCTTaGTCAGAGTGGGCAGGAATC +
Preference number: 2 (lower is better)
Translates to: SEEEQTVLVAEAEPGQILGDWAS*SEWAGI
Trigger: GATTCCTGCCCACTCTGAGCAAGATGCCCAGTCCCC...TAGGATTTGGCCCGGTTCTGCTTCAGCCACCAGCACCGTCTGCTCCTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCCCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPPADPQ*ALAAAG
Trigger: TCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGG...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp GTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGAGAGGTCGTACTTGTAGCGTGCTCCAGGAAGTaGCCCAGCTTCTCAGCGTCA +
Preference number: 2 (lower is better)
Translates to: VSHDVVEPLHREGEVVLVACSRK*PSFSAS
Trigger: TGACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGC...TACAAGTACGACCTCTCCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR TCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCT +
Preference number: 2 (lower is better)
Translates to: LDIHDRMRCASSCIAQPIAAQGS*RAETHS
Trigger: AGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGC...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR TCA 90 bp ATGCACACAGCATCCATGAACTCGAATGCAGACAGGATCTCACCCAGCATCCCCGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCT +
Preference number: 2 (lower is better)
Translates to: MHTASMNSNADRISPSIPAAQGS*RAETHS
Trigger: AGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGC...GGGGATGCTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAATGTCGGGGTGTGGCTaGAGACGCGTAGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPMSGCG*RRVEGW
Trigger: CCAGCCCTCTACGCGTCTGCAGCCACACCCCGACAT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTTCTGGCGGTGGGGACTaGGCATCTTGCTCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: RAQTDRPVVCVAFACFELSGGGD*ASCSEW
Trigger: CCACTCTGAGCAAGATGCCCAGTCCCCACCGCCAGA...AAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACACCATGTCGGGGTGTaGCTGCAGACGCGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPHHVGV*LQTRRG
Trigger: CCCTCTACGCGTCTGCAGCCACACCCCGACATGGTG...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CAA 90 bp GATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCCATaGTGGAGATCTGTAGACTCAGCTACTCGGGAGGCTGAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: DRPVVCVAFACFELP*WRSVDSATREAEAG
Trigger: TCCCGCCTCAGCCTCCCGAGTAGCTGAGTCTACAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAGAAGTGGGACAAGAGTaGCTCGTCGGAAGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPEVGQE*LVGSRP
Trigger: GGGGCGACTTCCGACGAGGCACTCTTGTCCCACTTC...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCAAACACACTCTGCAGTaGCCCTTGTCCGTGCCGGGG +
Preference number: 2 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPKHTLQ*PLSVPG
Trigger: CCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCGGCAGACACCTGCACTaGGTGACACAGGAGCACCTC +
Preference number: 2 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPGRHLH*VTQEHL
Trigger: GAGGTGCTCCTGTGTCACCCAGTGCAGGTGTCTGCC...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCCCGCTGCCCACGCATaGCCGGGGAACGAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: RFLLDIHDRMRCASSCIAPAAHA*PGNEQQ
Trigger: TTGCTGCTCGTTCCCCGGGCATGCGTGGGCAGCGGG...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR GCA 90 bp AGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCACTCAGGTCTTCCCTaGACTCAGGACCTCATCCAA +
Preference number: 2 (lower is better)
Translates to: RAQTDRPVVCVAFACFELHSGLP*TQDLIQ
Trigger: TTGGATGAGGTCCTGAGTGCAGGGAAGACCTGAGTG...AAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGAACTGTCTTCCCAGCTaGCAGCCCTCTAGAAGATGT +
Preference number: 2 (lower is better)
Translates to: EPETQSTACPDNCLPSWQNCLPS*QPSRRC
Trigger: ACATCTTCTAGAGGGCTGCCAGCTGGGAAGACAGTT...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGCCACGTTCACAGCCCTaGGCTTGGGTGGACACAAGA +
Preference number: 2 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQPRSQP*AWVDTR
Trigger: TCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGG...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp ATGCACACAGCATCCATGAACTCGAATGCAGACAGGATCTCACCCAGCATCCCCACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: MHTASMNSNADRISPSIPTQSTA*PDNCLP
Trigger: GGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGT...GGGGATGCTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR GCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCAAGCCGACCCTCAAGTaGAAAGATGGAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPKPTLK*KDGKEL
Trigger: CAGTTCCTTTCCATCTTTGCACTTGAGGGTCGGCTT...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR TCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCTTTACTGGACATTCATaGCAGAATGAGATGTGCATC +
Preference number: 2 (lower is better)
Translates to: QNPKLRAQLALITVFPAGFTGHS*QNEMCI
Trigger: GATGCACATCTCATTCTGTCATGAATGTCCAGTAAA...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCAATGCAAAGGCATGTaGATATCAGAGAAGAATTTT +
Preference number: 2 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCQCKGM*ISEKNF
Trigger: AAAATTCTTCTCTGATATCCACATGCCTTTGCATTG...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp TCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTaGTCCTGCCCGTGCCCCCGCTGCCCACGCCCCCTG +
Preference number: 3 (lower is better)
Translates to: SGPLGNPRSRPT*SCPCPRCPRPL
Trigger: CAGGGGGCGTGGGCAGCGGGGGCACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR CCA 72 bp AACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGAGTGGCCGTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: NTPAREPPADPQ*ALAAAGVAVRP
Trigger: AGGCCTGACGGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR-3UTR CAA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTGACCCCCAGTGGGCCTaGGCAGCAGCAGGAGTGGCC +
Preference number: 3 (lower is better)
Translates to: HSAVALVRAGALARSTARDPQWA*AAAGVA
Trigger: GGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTC...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CAA 90 bp CTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGGGCTCGACCCCCAGTGGGCCTaGGCAGCAGCAGGAGTGGCC +
Preference number: 3 (lower is better)
Translates to: LRADAALLPGRPLVHVGLDPQWA*AAAGVA
Trigger: GGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTC...GAGCCCCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR GCA 72 bp AAGCCCACTCCGTGCTCCGCGCTGACGCTGCCCTGCTaGCCGGCCGTCCACTCGTACACGTGGGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: KPTPCSALTLPC*PAVHSYTWGSR
Trigger: CCTGGAGCCCCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR GCA 72 bp CTGAAGCCCACTCCGTGCTCCGCGCTGACGCTGCCCTaGTGCCCGGCCGTCCACTCGTACACGTGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: LKPTPCSALTLP*CPAVHSYTWGS
Trigger: GGAGCCCCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
3UTR GCA 72 bp GTGGAGATGTCTGCAGGCGGGCAGCCCCAGAGACGCTaGAGCAGGAGGGGGCCCGTGCCCACCTTTCAGGGC +
Preference number: 3 (lower is better)
Translates to: VEMSAGGQPQRR*SRRGPVPTFQG
Trigger: GCCCTGAAAGGTGGGCACGGGCCCCCTCCTGCTGCAGCGTCTCTGGGGCTGCCCGCCTGCAGACATCTCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CAA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGACCCCCAGTGGGCCTaGGCAGCAGCAGGAGTGGCC +
Preference number: 3 (lower is better)
Translates to: SRAAALRSSRQPTITAHVDPQWA*AAAGVA
Trigger: GGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTC...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CAA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRTLQWP*SVPGPS
Trigger: CGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGT...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CAA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGGTTAGTGCTCCAGGGTaGGTGGGGGCTACCAGTGAG +
Preference number: 3 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWVSAPG*VGATSE
Trigger: CTCACTGGTAGCCCCCACCAACCCTGGAGCACTAAC...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp CCCAGGGCAGCTGACGAGCAGAAACACACTCTGCAGTaGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCA +
Preference number: 3 (lower is better)
Translates to: PRAADEQKHTLQ*PLSVPGPSPAA
Trigger: TGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR-3UTR CAA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGAC +
Preference number: 3 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWFTALG*GGHKMD
Trigger: GTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAA...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 72 bp AGGCGGCTGGGACACCTCACAGAAGGGGGACAGCCATaGCGGAAGGGGGAGGCGCCCACCTGCAGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: RRLGHLTEGGQP*RKGEAPTCSFR
Trigger: CCTGAAGCTGCAGGTGGGCGCCTCCCCCTTCCGTCATGGCTGTCCCCCTTCTGTGAGGTGTCCCAGCCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp TACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGGCGCGCAGGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: YHLQGGHSPPRA*RAGRGGRAGQS
Trigger: TGACTGACCTGCGCGCCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp AAGGCCTGTGACCCGAGCACCATGTCGGGGTGTGGCTaGAGACGCGTAGAGGGCTGGGGTGTGGGAGGTGGT +
Preference number: 3 (lower is better)
Translates to: KACDPSTMSGCG*RRVEGWGVGGG
Trigger: ACCACCTCCCACACCCCAGCCCTCTACGCGTCTGCAGCCACACCCCGACATGGTGCTCGGGTCACAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CAA 90 bp CGAGGCGGGCGCGCAGGTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGGCCTCCGCCGTCACATaGAGGTGCAGGTTACCATCT +
Preference number: 3 (lower is better)
Translates to: RGGRAGQSRCRRAAPQGGASAVT*RCRLPS
Trigger: AGATGGTAACCTGCACCTCAATGTGACGGCGGAGGC...CCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGCCCGCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 72 bp CGTGGGCGTGGCACGAAGAGGCGAGTGACTCCTGTCTaGGACCTGGAGTGCGAAGAGCAGGATGCGGCAGCC +
Preference number: 3 (lower is better)
Translates to: RGRGTKRRVTPV*DLECEEQDAAA
Trigger: GGCTGCCGCATCCTGCTCTTCGCACTCCAGGTCTCAGACAGGAGTCACTCGCCTCTTCGTGCCACGCCCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 72 bp CCTGCACTGGGTGACACAGGAGCACCTCAAGGCCTGTaGCCCGAGCACCATGTCGGGGTGTGGCTGCAGACG +
Preference number: 3 (lower is better)
Translates to: PALGDTGAPQGL*PEHHVGVWLQT
Trigger: CGTCTGCAGCCACACCCCGACATGGTGCTCGGGTCACAGGCCTTGAGGTGCTCCTGTGTCACCCAGTGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp ACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTaGCGGGGCCCTCGCCCGCAGCACCGCACGTTCTTT +
Preference number: 3 (lower is better)
Translates to: TSRNTLCSGPCP*RGPRPQHRTFF
Trigger: AAAGAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR CCA 72 bp CCTCATCCAACAGGCGTGTTAGTGCTCCAGGGTTGGTaGGGGCTACCAGTGAGGCCGCTGCCCTGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: PHPTGVLVLQGW*GLPVRPLPWGS
Trigger: GCTTCCCCAGGGCAGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGATGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp GGACCTCATCCAACAGGCGTGTTAGTGCTCCAGGGTTaGTGGGGGCTACCAGTGAGGCCGCTGCCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: GPHPTGVLVLQG*WGLPVRPLPWG
Trigger: TCCCCAGGGCAGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGATGAGGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp CCAGCCTGGGTGAGAGCGAGACCCTTGACTTTCCTCTaGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCG +
Preference number: 3 (lower is better)
Translates to: PAWVRARPLTFL*SVAMVPSVTRP
Trigger: CGGCCTGGTGACCGATGGGACCATGGCCACCGACCAGAGGAAAGTCAAGGGTCTCGCTCTCACCCAGGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CAA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGAGCAACAGGCAGCCTTaGGGAATGGCTGCATTTCTC +
Preference number: 3 (lower is better)
Translates to: SVLRADAALLPGRPLVHVSNRQP*GMAAFL
Trigger: GAGAAATGCAGCCATTCCCAAAGGCTGCCTGTTGCT...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CAA 90 bp CAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTGGGACACCTCACAGATCACCCAGCATCCCCTaGCAGGTGCTGAAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: QHRAPWDSGNQAAGTPHRSPSIP*QVLKVC
Trigger: GCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGA...TCTGTGAGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 72 bp CCCGGCTTAGACGTGGGCGTGGCACGAAGAGGCGAGTaGCTCCTGTCTGAGACCTGGAGTGCGAAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: PGLDVGVARRGE*LLSETWSAKSR
Trigger: CCTGCTCTTCGCACTCCAGGTCTCAGACAGGAGTCACTCGCCTCTTCGTGCCACGCCCACGTCTAAGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp CAGGGTTGGTGGGGGCTACCAGTGAGGCCGCTGCCCTaGGGAAGCCGACCCTCAAGTGCAAAGATGGAAAGG +
Preference number: 3 (lower is better)
Translates to: QGWWGLPVRPLP*GSRPSSAKMER
Trigger: CCTTTCCATCTTTGCACTTGAGGGTCGGCTTCCCCAGGGCAGCGGCCTCACTGGTAGCCCCCACCAACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp AACGGACTCTCTTGCACCGGGCTGGCCAGGTGGAGATaGCGCCCGACCAGCTGCATGCACACAGCATCCATG +
Preference number: 3 (lower is better)
Translates to: NGLSCTGLARWR*RPTSCMHTASM
Trigger: CATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGAGTCCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp AGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTaGCCAGGGCAGCTGACGAGCAGAAACACACTCTGC +
Preference number: 3 (lower is better)
Translates to: RCASSCIAQPIR*PGQLTSRNTLC
Trigger: GCAGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR GCA 72 bp ACCGGGCTGGCCAGGTGGAGATGGCGCCCGACCAGCTaGATGCACACAGCATCCATGAACTCGAATGCAGAC +
Preference number: 3 (lower is better)
Translates to: TGLARWRWRPTS*MHTASMNSNAD
Trigger: GTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp GCGTGCTCCAGGAAGTGGCCCAGCTTCTCAGCGTCATaGCCTGCGTTGGAGCCTGAAGTCTCGATGAGGACG +
Preference number: 3 (lower is better)
Translates to: ACSRKWPSFSAS*PALEPEVSMRT
Trigger: CGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp GCATCTTGCTCAGAGTGGGCAGGAATCCCCAGGAAGTaGGACAAGAGTGCCTCGTCGGAAGTCGCCCCAGCT +
Preference number: 3 (lower is better)
Translates to: ASCSEWAGIPRK*DKSASSEVAPA
Trigger: AGCTGGGGCGACTTCCGACGAGGCACTCTTGTCCCACTTCCTGGGGATTCCTGCCCACTCTGAGCAAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CAA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPTLQWP*SVPGPS
Trigger: CGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGT...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR TCA 72 bp CAGCGTCATGGCCTGCGTTGGAGCCTGAAGTCTCGATaGGGACGTAAAACGGACTCTCTTGCACCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: QRHGLRWSLKSR*GRKTDSLAPGW
Trigger: CCAGCCCGGTGCAAGAGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp AGGCGCCGAAGAACCACACAGCACCTGAGACGGCAGTaGGACTCAGAGGGGGCGTATCTTGGGAATTCTGCA +
Preference number: 3 (lower is better)
Translates to: RRRRTTQHLRRQ*DSEGAYLGNSA
Trigger: TGCAGAATTCCCAAGATACGCCCCCTCTGAGTCCCACTGCCGTCTCAGGTGCTGTGTGGTTCTTCGGCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR-3UTR CAA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCGTAAAACGGACTCTCTaGCACCGGGCTGGCCAGGTG +
Preference number: 3 (lower is better)
Translates to: QNPKLRAQLALITVFPAGVKRTL*HRAGQV
Trigger: CACCTGGCCAGCCCGGTGCAAGAGAGTCCGTTTTAC...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 72 bp GATGGCGCCCGACCAGCTGCATGCACACAGCATCCATaGACTCGAATGCAGACAGGATCTCACCCAGCATCC +
Preference number: 3 (lower is better)
Translates to: DGARPAACTQHP*TRMQTGSHPAS
Trigger: GGATGCTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp AGTGAGGCCGCTGCCCTGGGGAAGCCGACCCTCAAGTaGAAAGATGGAAAGGAACTGAGTGGAGATGTCTGC +
Preference number: 3 (lower is better)
Translates to: SEAAALGKPTLK*KDGKELSGDVC
Trigger: GCAGACATCTCCACTCAGTTCCTTTCCATCTTTGCACTTGAGGGTCGGCTTCCCCAGGGCAGCGGCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp ATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCTAGTGTC +
Preference number: 3 (lower is better)
Translates to: ISPSIPLQVLKV*RTSAKPGQPSV
Trigger: GACACTAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp GACGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAA +
Preference number: 3 (lower is better)
Translates to: DEESHVHSPGLG*TQDGHRGDDPQ
Trigger: TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR TCA 72 bp GCCCAGCTTCTCAGCGTCATGGCCTGCGTTGGAGCCTaGAGTCTCGATGAGGACGTAAAACGGACTCTCTTG +
Preference number: 3 (lower is better)
Translates to: AQLLSVMACVGA*SLDEDVKRTLL
Trigger: CAAGAGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp GACCAGCTGCATGCACACAGCATCCATGAACTCGAATaGAGACAGGATCTCACCCAGCATCCCCTTGCAGGT +
Preference number: 3 (lower is better)
Translates to: DQLHAHSIHELE*RQDLTQHPLAG
Trigger: ACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp CCGGGCCAAATCCTAGGGCTCAGACAGATCGGCCTGTaGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCCAT +
Preference number: 3 (lower is better)
Translates to: PGQILGLRQIGL*FAWLLLASNFH
Trigger: ATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGGATTTGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp TTTGTAGGAGCAGAACCCGAAACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCCAGCTGGCAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: FVGAEPETQSTA*PDNCLPSWQPS
Trigger: AGAGGGCTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTGCTCCTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR GCA 72 bp GGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTaGTTGCTTCGAACTTCCATTGTGGAGATCTGTAGA +
Preference number: 3 (lower is better)
Translates to: GSDRSACGLRGF*LLRTSIVEICR
Trigger: TCTACAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp GTTTGCGTGGCTTTTGCTTGCTTCGAACTTCCATTGTaGAGATCTGTAGACTCAGCTACTCGGGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: VCVAFACFELPL*RSVDSATREAE
Trigger: CTCAGCCTCCCGAGTAGCTGAGTCTACAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CCA 72 bp ATCCTAGGGCTCAGACAGATCGGCCTGTGGTTTGCGTaGCTTTTGCTTGCTTCGAACTTCCATTGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: ILGLRQIGLWFA*LLLASNFHCGD
Trigger: ATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp ACACAGAGCCAGCAACAGGCAGCCTTTGGGAATGGCTaGATTTCTCTTAACACAATCAGCACTCAGGTCTTC +
Preference number: 3 (lower is better)
Translates to: TQSQQQAAFGNG*ISLNTISTQVF
Trigger: GAAGACCTGAGTGCTGATTGTGTTAAGAGAAATGCAGCCATTCCCAAAGGCTGCCTGTTGCTGGCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR GCA 72 bp CAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTaGTTCGAACTTCCATTGTGGAGATCTGTAGACTCA +
Preference number: 3 (lower is better)
Translates to: QTDRPVVCVAFA*FELPLWRSVDS
Trigger: TGAGTCTACAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp TCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGCGCTTCCGGGTCCGTaGCGACCCCGCCGGGCACGA +
Preference number: 4 (lower is better)
Translates to: SLRATATPPPESHPPTPSALPGP*RPRRAR
Trigger: TCGTGCCCGGCGGGGTCGTCACGGACCCGGAAGCGC...ACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCGAAGGGGGACAGCCATaGCGGAAGGGGGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWAEGGQP*RKGEAP
Trigger: GGGCGCCTCCCCCTTCCGTCATGGCTGTCCCCCTTC...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCGCCCAGCCCATCCGCTaGCCAGGGCAGCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSAQPIR*PGQLTS
Trigger: GCTCGTCAGCTGCCCTGGGCAGCGGATGGGCTGGGC...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCCCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSPADPQ*ALAAAG
Trigger: TCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGG...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CTGGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCGGAGCCCAGCGCGTGCTCGCGCTTCCGGGTCCGTaGCGACCCCGCCGGGCACGA +
Preference number: 4 (lower is better)
Translates to: LVGGHGPIGHQAGAQRVLALPGP*RPRRAR
Trigger: TCGTGCCCGGCGGGGTCGTCACGGACCCGGAAGCGC...GAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACGCGCTGACGCTGCCCTaGTGCCCGGCCGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADALTLP*CPAVHS
Trigger: CGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGC...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCCTGAAGCCCACTCCGTaGTCCGCGCTGACGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWALKPTP*SALTLP
Trigger: GGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTTCAG...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACCCACCACCCAGCGCCTaGTCCCCAGGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHPPPSA*SPGRSR
Trigger: CCTGCTGCGGCCTGGGGAGCAGGCGCTGGGTGGTGG...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGCCCAGCCCATCCGCTaGCCAGGGCAGCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLAQPIR*PGQLTS
Trigger: GCTCGTCAGCTGCCCTGGGCAGCGGATGGGCTGGGC...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTCGGGCTCCTCCTTGGTaGGGGGCCGGTACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HSAVALVRAGALARSTARRAPPW*GAGTQG
Trigger: GCCCTGAGTACCGGCCCCCCACCAAGGAGGAGCCCG...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp TCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTACCGGGCTGGCCAGGTaGAGATGGCGCCCGACCAGC +
Preference number: 4 (lower is better)
Translates to: SLRATATPPPESHPPTPSTGLAR*RWRPTS
Trigger: GCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGT...ACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCCCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFPADPQ*ALAAAG
Trigger: TCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGG...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTTCCACGTTGGGAGCCTaGAGCGCTTCCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLSTLGA*SASGSV
Trigger: CACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGA...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGGCGCTGACGCTGCCCTaGTGCCCGGCCGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPALTLP*CPAVHS
Trigger: CGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGC...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTAGCTGCTGCATGAGCTaGAGGGCCCCCGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RATATPPPESHPPTPSGPSCCMS*RAPGGL
Trigger: CAAGCCACCGGGGGCCCTGCAGCTCATGCAGCAGCT...AGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCAAGGGCCTTGAGCTGCTaGATGAGCTGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RNTPAREPPADPQWALAARALSC*MSCRAP
Trigger: GGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCT...TGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTGTGCGAAGAGCAGGATaGGGCAGCCGGGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HSAVALVRAGALARSTARVRRAG*GSRAGL
Trigger: GAGGCCAGCCCGGCTGCCGCATCCTGCTCTTCGCAC...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSSPPRA*RAGRGG
Trigger: CCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCT...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCTGGCAGCAGCAGGAGTaGCCGTCAGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFWQQQE*PSGLAG
Trigger: CCCAGCCAGGCCTGACGGCCACTCCTGCTGCTGCCA...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACTGGCAGCAGCAGGAGTaGCCGTCAGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADWQQQE*PSGLAG
Trigger: CCCAGCCAGGCCTGACGGCCACTCCTGCTGCTGCCA...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACTGGCAGCAGCAGGAGTaGCCGTCAGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHWQQQE*PSGLAG
Trigger: CCCAGCCAGGCCTGACGGCCACTCCTGCTGCTGCCA...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCAGTGAGGCCGCTGCCCTaGGGAAGCCGACCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: RNTPAREPPADPQWALAAVRPLP*GSRPSS
Trigger: ACTTGAGGGTCGGCTTCCCCAGGGCAGCGGCCTCAC...TGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCGCTGACGCTGCCCTaGTGCCCGGCCGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPALTLP*CPAVHS
Trigger: CGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGC...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCCACCACCCAGCGCCTaGTCCCCAGGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHPPPSA*SPGRSR
Trigger: CCTGCTGCGGCCTGGGGAGCAGGCGCTGGGTGGTGG...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCACCACCCAGCGCCTaGTCCCCAGGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVPPPSA*SPGRSR
Trigger: CCTGCTGCGGCCTGGGGAGCAGGCGCTGGGTGGTGG...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTAGTGGCCCTTGTCCGTaGCGGGGCCCTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPSGPCP*RGPRPQ
Trigger: CTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACT...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGAGTGGCCCTTGTCCGTaGCGGGGCCCTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVSGPCP*RGPRPQ
Trigger: CTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACT...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGAGTGGCCCTTGTCCGTaGCGGGGCCCTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTSGPCP*RGPRPQ
Trigger: CTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACT...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCAGATGTGCATCCAGCTaGATCGCCCAGCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWARCASS*IAQPIR
Trigger: GCGGATGGGCTGGGCGATGCAGCTGGATGCACATCT...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCGAAGTGGGACAAGAGTaGCTCGTCGGAAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWAEVGQE*LVGSRP
Trigger: GGGGCGACTTCCGACGAGGCACTCTTGTCCCACTTC...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCGCCAGGTTCCTCTCGTaGCAGTGCCTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWAARFLS*QCLRMW
Trigger: CCACATCCTCAGGCACTGCCACGAGAGGAACCTGGC...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTGCAGGCCTCCAGCGTTaGTTGCCACGTTTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RATATPPPESHPPTPSGPAGLQR*LPRFPR
Trigger: TCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGC...AGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp TCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTCTGGCCAGGTGGAGATaGCGCCCGACCAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: SLRATATPPPESHPPTPSLARWR*RPTSCM
Trigger: CATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAG...ACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCTGGCCAGGTGGAGATaGCGCCCGACCAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADLARWR*RPTSCM
Trigger: CATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAG...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHSPPRA*RAGRGG
Trigger: CCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCT...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCCACCTGAGACGGCAGTaGGACTCAGAGGGGGCGTAT +
Preference number: 4 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSHLRRQ*DSEGAY
Trigger: ATACGCCCCCTCTGAGTCCCACTGCCGTCTCAGGTG...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTACACGCTGTGGAAGCTaGGGACCCGGTTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: HSAVALVRAGALARSTARTRCGS*GPGSCG
Trigger: CCCGCATGAACCGGGTCCTCAGCTTCCACAGCGTGT...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCGCCTGCGTTGGAGCCTaGAGTCTCGATGAGGACGTA +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWAACVGA*SLDEDV
Trigger: TACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGC...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCCAGGAGCGAGGGGCTaGAGGCCTCCGCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSPGARG*RPPPSH
Trigger: ATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGG...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCAGCGTCTTGTAGGGGTTaGGGATGCCCTTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RNTPAREPPADPQWALAAASCRG*GCPWGP
Trigger: TGGACCCCAAGGGCATCCTCAACCCCTACAAGACGC...TGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGGGGCCACCACGCAAGTaGGACCCACCCCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPGPPRK*DPPRFH
Trigger: GTGGAAGCGGGGTGGGTCTCACTTGCGTGGTGGCCC...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCCCCGCCGGGCACGATaGGCTCAAAGGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHPRRAR*AQRRPG
Trigger: ACCTGGCCGCCTTTGAGCGCATCGTGCCCGGCGGGG...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCGCCCGACCAGCTaGATGCACACAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: RATATPPPESHPPTPSGPWRPTS*MHTASM
Trigger: CATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCA...AGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCTGAAGCCCACTCCGTaGTCCGCGCTGACGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPLKPTP*SALTLP
Trigger: GGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTTCAG...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCGGGCCCCCGGTGGCTTaGTGTAGCCCAGGACGTCCC +
Preference number: 4 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPGPPVA*CSPGRP
Trigger: GGGACGTCCTGGGCTACAGCAAGCCACCGGGGGCCC...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCGGAGCCCAGCGCGTGCTCAGCTGCTGCATGAGCTaGAGGGCCCCCGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LVGGHGPIGHQAGAQRVLSCCMS*RAPGGL
Trigger: CAAGCCACCGGGGGCCCTGCAGCTCATGCAGCAGCT...GAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACAGCAGGGCCTTGAGCTaGTGCATGAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADSRALS*CMSCRA
Trigger: GGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCTGCT...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTCCCTTCAACCAGGTaGCTGGTCCCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHVPSTR*LVPCPL
Trigger: CAGTGGGCAGGGGACCAGGCACCTGGTTGAAGGGAC...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCACCACCCAGCGCCTaGTCCCCAGGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRPPPSA*SPGRSR
Trigger: CCTGCTGCGGCCTGGGGAGCAGGCGCTGGGTGGTGG...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCAGTGGCCCTTGTCCGTaGCGGGGCCCTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRSGPCP*RGPRPQ
Trigger: CTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACT...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTATGTCGGGGTGTGGCTaGAGACGCGTAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLRATATPPPESHPPTPSMSGCG*RRVEGW
Trigger: CCAGCCCTCTACGCGTCTGCAGCCACACCCCGACAT...ACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTCGGGCTCCTCCTTGGTaGGGGGCCGGTACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QQSRSAQVLSATHDHGPRRAPPW*GAGTQG
Trigger: GCCCTGAGTACCGGCCCCCCACCAAGGAGGAGCCCG...ACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACGCAACCAGTCCACGTTaGGAGCCTGCAGCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADATSPR*EPAALP
Trigger: CGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGC...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTCTCCTCCGACGTCCGTaGCCTCAGCAGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: HSAVALVRAGALARSTARLLRRP*PQQHLA
Trigger: AGCAAGGTGCTGCTGAGGCCACGGACGTCGGAGGAG...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCACAGTGCCTGAGGATGTaGGACACCTCCTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: RNTPAREPPADPQWALAAQCLRM*DTSSDV
Trigger: GACGTCGGAGGAGGTGTCCCACATCCTCAGGCACTG...TGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTCAGTGCCTGAGGATGTaGGACACCTCCTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLQCLRM*DTSSDV
Trigger: GACGTCGGAGGAGGTGTCCCACATCCTCAGGCACTG...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCAGGACGCAGCCCGCCTaGCAAACCAGAATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSRTQPA*QTRIPD
Trigger: GTCTGGAATTCTGGTTTGCCAGGCGGGCTGCGTCCT...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
CDS-3UTR CCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGCAGGCCTCCAGCGTTaGTTGCCACGTTTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHAGLQR*LPRFPR
Trigger: TCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGC...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp ACAAGGGCTGGCTATGGGAACGACACCCGGGGACAGGGGGCACACCACACGGGGACCGGGCTGGCCAGGTaGAGATGGCGCCCGACCAGC +
Preference number: 4 (lower is better)
Translates to: TRAGYGNDTRGQGAHHTGTGLAR*RWRPTS
Trigger: GCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGT...CCCCGTGTGGTGTGCCCCCTGTCCCCGGGTGTCGTTCCCATAGCCAGCCCTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCGATCACGGCCCACGTaGTCCTGCCCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRRSRPT*SCPCPR
Trigger: GCGGGGGCACGGGCAGGACCACGTGGGCCGTGATCG...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCCCCTTGACTTTCCTCTaGTCGGTGGCCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSPLTFL*SVAMVP
Trigger: TGGGACCATGGCCACCGACCAGAGGAAAGTCAAGGG...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTTGCCCTCCGACCCGATaGACAGCTGCTTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLCPPTR*TAASGH
Trigger: ATGACCTGAAGCAGCTGTTCATCGGGTCGGAGGGCA...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTTCCCCTTGCAGGTGCTaGAGGTCTGCAGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLSPCRC*RSAEPQ
Trigger: CTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGA...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGCCTGCGTTGGAGCCTaGAGTCTCGATGAGGACGTA +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLACVGA*SLDEDV
Trigger: TACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGC...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CCACGACAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTGGGACACCTCCAGGAGCGAGGGGCTaGAGGCCTCCGCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: PRQHRAPWDSGNQAAGTPPGARG*RPPPSH
Trigger: ATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGG...AGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTGTCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CGAGGCGGGCGCGCAGGTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGGGACGTCCCTCTTCCTaGAGCCCACTCCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGGRAGQSRCRRAAPQGGGRPSS*SPLRAP
Trigger: CGGAGCACGGAGTGGGCTTCAGGAAGAGGGACGTCC...CCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGCCCGCCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTAGGGCGTCCACGGCCTaGGGGACCCGGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPRASTA*GTRLHS
Trigger: TGAATGGAGCCGGGTCCCTCAGGCCGTGGACGCCCT...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGGACGGTGCTGGTGGCTaGAGCAGAACCGGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWDGAGG*SRTGPN
Trigger: ATTTGGCCCGGTTCTGCTTCAGCCACCAGCACCGTC...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGTCCACGTTGGGAGCCTaGAGCGCTTCCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPSTLGA*SASGSV
Trigger: CACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGA...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTCAAAGACGGGGACGCTaGCACCCACCATGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: HSAVALVRAGALARSTARQRRGR*HPPCLC
Trigger: ACACAGGCATGGTGGGTGGCAGCGTCCCCGTCTTTG...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGCAAAGACGGGGACGCTaGCACCCACCATGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWQRRGR*HPPCLC
Trigger: ACACAGGCATGGTGGGTGGCAGCGTCCCCGTCTTTG...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp CACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTGCCTCCAGCGTTGGTTaGCACGTTTCCCCCGATGTG +
Preference number: 4 (lower is better)
Translates to: HSAVALVRAGALARSTARASSVG*HVSPDV
Trigger: CACATCGGGGGAAACGTGGCAACCAACGCTGGAGGC...ACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTCTGAAGCCCACTCCGTaGTCCGCGCTGACGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QQSRSAQVLSATHDHGPRLKPTP*SALTLP
Trigger: GGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTTCAG...ACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAGCACCTCAAGGCCTGTGACCCGAGCACCATGTCGGGGTGTGGCTGCAGACGCGGGCCCCCGGTGGCTTaGTGTAGCCCAGGACGTCCC +
Preference number: 4 (lower is better)
Translates to: EHLKACDPSTMSGCGCRRGPPVA*CSPGRP
Trigger: GGGACGTCCTGGGCTACAGCAAGCCACCGGGGGCCC...GCGTCTGCAGCCACACCCCGACATGGTGCTCGGGTCACAGGCCTTGAGGTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCGGAGCCCAGCGCGTGCTCGTCCCTTCAACCAGGTaGCTGGTCCCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LVGGHGPIGHQAGAQRVLVPSTR*LVPCPL
Trigger: CAGTGGGCAGGGGACCAGGCACCTGGTTGAAGGGAC...GAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCCGCTGCCCACGCATaGCCGGGGAACGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVPAAHA*PGNEQQ
Trigger: TTGCTGCTCGTTCCCCGGGCATGCGTGGGCAGCGGG...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCGCCCAGCCCATCCGCTaGCCAGGGCAGCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPAQPIR*PGQLTS
Trigger: GCTCGTCAGCTGCCCTGGGCAGCGGATGGGCTGGGC...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGACGTTTCCCCCGATGTaGCAGCTGCCCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWTFPPM*QLPLAP
Trigger: AGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGT...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCACGTTTCCCCCGATGTaGCAGCTGCCCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFTFPPM*QLPLAP
Trigger: AGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGT...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCAGCTTCTCAGCGTCATaGCCTGCGTTGGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PQHPRPRATRRPPVGLGSSFSAS*PALEPE
Trigger: TTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCT...GCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CGAGGCGGGCGCGCAGGTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGGTCCACTCGTACACGTaGGGCTCCAGGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGGRAGQSRCRRAAPQGGVHSYT*GSRAAR
Trigger: CCTGGCTGCCCTGGAGCCCCACGTGTACGAGTGGAC...CCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGCCCGCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCATGGCAGCAGCAGGAGTaGCCGTCAGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPWQQQE*PSGLAG
Trigger: CCCAGCCAGGCCTGACGGCCACTCCTGCTGCTGCCA...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR CAA 72 bp GCAGCTGACGAGCAGAAACACACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCAC +
Preference number: 4 (lower is better)
Translates to: AADEQKHTLQWP*SVPGPSPAAPH
Trigger: GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGGGCTCTGCCCTCCGACCCGATaGACAGCTGCTTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LRADAALLPGRPLVHVGLCPPTR*TAASGH
Trigger: ATGACCTGAAGCAGCTGTTCATCGGGTCGGAGGGCA...GAGCCCCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR TCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCTCCCCTTGCAGGTGCTaGAGGTCTGCAGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFSPCRC*RSAEPQ
Trigger: CTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGA...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACCCAGGAGCGAGGGGCTaGAGGCCTCCGCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: FSRAAALRSSRQPTITAHPGARG*RPPPSH
Trigger: ATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGG...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGGGACGTCCCTCTTCCTaGAGCCCACTCCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTGRPSS*SPLRAP
Trigger: CGGAGCACGGAGTGGGCTTCAGGAAGAGGGACGTCC...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGGACGTCCCTCTTCCTaGAGCCCACTCCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVGRPSS*SPLRAP
Trigger: CGGAGCACGGAGTGGGCTTCAGGAAGAGGGACGTCC...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCACCTCAAGGCCTGTGACCCGAGCACCATGTCGGGGTGTGGCTGCAGACGCGGGCCACCACGCAAGTaGGACCCACCCCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EHLKACDPSTMSGCGCRRGPPRK*DPPRFH
Trigger: GTGGAAGCGGGGTGGGTCTCACTTGCGTGGTGGCCC...GCGTCTGCAGCCACACCCCGACATGGTGCTCGGGTCACAGGCCTTGAGGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCAGGGCGTCCACGGCCTaGGGGACCCGGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPRASTA*GTRLHS
Trigger: TGAATGGAGCCGGGTCCCTCAGGCCGTGGACGCCCT...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCT +
Preference number: 4 (lower is better)
Translates to: SVLRADAALLPGRPLVHVAAQGS*RAETHS
Trigger: AGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGC...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGCCCCGATGTGGCAGCTaGCCTTGGCTCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVLRADAALLPGRPLVHVPRCGS*PWLLSP
Trigger: TGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGG...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGGGCAGTCCAGGACAGTaGCGTCGGCCAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPGSPGQ*RRPAPL
Trigger: AAGTGGTGCTGGCCGACGGCACTGTCCTGGACTGCC...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCCTGACGCTGCCCTGCTaGCCGGCCGTCCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPLTLPC*PAVHSY
Trigger: GTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAG...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGGCCGAGGGGCCCCCGGTGGCTTaGTGTAGCCCAGGACGTCCC +
Preference number: 4 (lower is better)
Translates to: VTISKVAIAHHVLGVRAEGPPVA*CSPGRP
Trigger: GGGACGTCCTGGGCTACAGCAAGCCACCGGGGGCCC...CTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTAGCTGCTGCATGAGCTaGAGGGCCCCCGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPSCCMS*RAPGGL
Trigger: CAAGCCACCGGGGGCCCTGCAGCTCATGCAGCAGCT...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTAGCTGCTGCATGAGCTaGAGGGCCCCCGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARSCCMS*RAPGGL
Trigger: CAAGCCACCGGGGGCCCTGCAGCTCATGCAGCAGCT...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACAGGGCCTTGAGCTGCTaGATGAGCTGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHRALSC*MSCRAP
Trigger: GGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCT...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTAGGGCCTTGAGCTGCTaGATGAGCTGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARRALSC*MSCRAP
Trigger: GGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCT...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCGTCCCTTCAACCAGGTaGCTGGTCCCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSVPSTR*LVPCPL
Trigger: CAGTGGGCAGGGGACCAGGCACCTGGTTGAAGGGAC...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTAGCAGAAACACACTCTaGAGTGGCCCTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RATATPPPESHPPTPSGPSRNTL*SGPCPC
Trigger: GCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCT...AGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCACGTTCACAGCCCTaGGCTTGGGTGGACACAAGA +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADPRSQP*AWVDTR
Trigger: TCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGG...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACAACCTCAGCAAAGCCTaGGCAGCCGAGGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHNLSKA*AAEESH
Trigger: GTGGCTTTCCTCGGCTGCCCAGGCTTTGCTGAGGTT...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGCTGGCCAGGTGGAGATaGCGCCCGACCAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTLARWR*RPTSCM
Trigger: CATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAG...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTTCTCTTGCACCGGGCTaGCCAGGTGGAGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARSLAPG*PGGDGA
Trigger: GGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGA...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACAGCACCGAGCACCCTaGGACTCCGGCAATCAGGCG +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPQHRAP*DSGNQA
Trigger: CGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTG...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGTCTGGCGGTGGGGACTaGGCATCTTGCTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SVLRADAALLPGRPLVHVSGGGD*ASCSEW
Trigger: CCACTCTGAGCAAGATGCCCAGTCCCCACCGCCAGA...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACCATGTCGGGGTGTaGCTGCAGACGCGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPHHVGV*LQTRRG
Trigger: CCCTCTACGCGTCTGCAGCCACACCCCGACATGGTG...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGTCTCGTGGCAGTGCCTaGGGATGTGGGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPSRGSA*GCGTPP
Trigger: AGGAGGTGTCCCACATCCTCAGGCACTGCCACGAGA...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCAGCCTGAAGTCTCGATaGGGACGTAAAACGGACTCT +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWASLKSR*GRKTDS
Trigger: AGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCT...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCGGGCCCACAGCATCTTaGCTTTCCTCTGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSGPTAS*LSSGRW
Trigger: CCACCGACCAGAGGAAAGTCAAGATGCTGTGGGCCC...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS-3UTR TCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCGGACGTCCCTCTTCCTaGAGCCCACTCCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPGRPSS*SPLRAP
Trigger: CGGAGCACGGAGTGGGCTTCAGGAAGAGGGACGTCC...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCT +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPAAQGS*RAETHS
Trigger: AGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGC...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACTGCAGCTTCAGGTCATaGCACGGCACAGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADCSFRS*HGTEWQ
Trigger: TTGCCACTCTGTGCCGTGTCATGACCTGAAGCTGCA...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CGAGGCGGGCGCGCAGGTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGGACACCTGCACTGGGTaGCACAGGAGCACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RGGRAGQSRCRRAAPQGGDTCTG*HRSTSR
Trigger: CCTTGAGGTGCTCCTGTGTCACCCAGTGCAGGTGTC...CCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGCCCGCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGCCTCAGCAGCACCTTaGTACAGCCTCGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVASAAP*YSLAAS
Trigger: GGACGCTGCGAGGCTGTAGCAAGGTGCTGCTGAGGC...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTGCCTCAGCAGCACCTTaGTACAGCCTCGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARASAAP*YSLAAS
Trigger: GGACGCTGCGAGGCTGTAGCAAGGTGCTGCTGAGGC...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCCACCATGCCTGTGTTaGCCCCCTGTGGGTTCACGG +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHPPCLC*PPVGSR
Trigger: CCGTGAACCCACAGGGGGGCAACACAGGCATGGTGG...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCCCACCATGCCTGTGTTaGCCCCCTGTGGGTTCACGG +
Preference number: 4 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPPPCLC*PPVGSR
Trigger: CCGTGAACCCACAGGGGGGCAACACAGGCATGGTGG...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCACCATGCCTGTGTTaGCCCCCTGTGGGTTCACGG +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVPPCLC*PPVGSR
Trigger: CCGTGAACCCACAGGGGGGCAACACAGGCATGGTGG...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGGCAGTCCAGGACAGTaGCGTCGGCCAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHGSPGQ*RRPAPL
Trigger: AAGTGGTGCTGGCCGACGGCACTGTCCTGGACTGCC...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGGGGCCCCCGGTGGCTTaGTGTAGCCCAGGACGTCCC +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGGPPVA*CSPGRP
Trigger: GGGACGTCCTGGGCTACAGCAAGCCACCGGGGGCCC...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGAGCAGGGCCTTGAGCTaGTGCATGAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTSRALS*CMSCRA
Trigger: GGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCTGCT...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGTCCCTTCAACCAGGTaGCTGGTCCCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPVPSTR*LVPCPL
Trigger: CAGTGGGCAGGGGACCAGGCACCTGGTTGAAGGGAC...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACAGCAGAAACACACTCTaGAGTGGCCCTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RLIPQSHRNTPAREPPADSRNTL*SGPCPC
Trigger: GCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCT...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGGGGACTGGGCATCTTaGTCAGAGTGGGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: SVLRADAALLPGRPLVHVGDWAS*SEWAGI
Trigger: GATTCCTGCCCACTCTGAGCAAGATGCCCAGTCCCC...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGCAACCAGTCCACGTTaGGAGCCTGCAGCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVATSPR*EPAALP
Trigger: CGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGC...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGCAGGCCTCCAGCGTTaGTTGCCACGTTTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVAGLQR*LPRFPR
Trigger: TCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGC...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGGCCGAGCTGCAGGGCCCCCGGTaGCTTGCTGTAGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VTISKVAIAHHVLGVRAELQGPR*LAVAQD
Trigger: GTCCTGGGCTACAGCAAGCCACCGGGGGCCCTGCAG...CTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCGCCGTCAGGCCTGGCTaGGCAGCGTCTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPAVRPG*AASCRG
Trigger: ACCCCTACAAGACGCTGCCCAGCCAGGCCTGACGGC...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGCCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGPADPQ*ALAAAG
Trigger: TCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGG...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTAGCAGACGGTGCTGGTaGCTGAAGCAGAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPSRRCW*LKQNRA
Trigger: GGCCCGGTTCTGCTTCAGCCACCAGCACCGTCTGCT...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGGGCAGACACCTGCACTaGGTGACACAGGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPGRHLH*VTQEHL
Trigger: GAGGTGCTCCTGTGTCACCCAGTGCAGGTGTCTGCC...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACACGCTGTGGAAGCTaGGGACCCGGTTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPTRCGS*GPGSCG
Trigger: CCCGCATGAACCGGGTCCTCAGCTTCCACAGCGTGT...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCACACGCTGTGGAAGCTaGGGACCCGGTTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRTRCGS*GPGSCG
Trigger: CCCGCATGAACCGGGTCCTCAGCTTCCACAGCGTGT...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCATGCACACAGCATCCATaGACTCGAATGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: RNTPAREPPADPQWALAACTQHP*TRMQTG
Trigger: TCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCA...TGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCCTCCGCCGTCACATTaGGGTGCAGGTTACCATCTC +
Preference number: 4 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSPPPSH*GAGYHL
Trigger: GAGATGGTAACCTGCACCTCAATGTGACGGCGGAGG...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGCGTCTTGTAGGGGTTaGGGATGCCCTTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPASCRG*GCPWGP
Trigger: TGGACCCCAAGGGCATCCTCAACCCCTACAAGACGC...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTGCGTCTTGTAGGGGTTaGGGATGCCCTTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARASCRG*GCPWGP
Trigger: TGGACCCCAAGGGCATCCTCAACCCCTACAAGACGC...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGGGGCCACCACGCAAGTaGGACCCACCCCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGGPPRK*DPPRFH
Trigger: GTGGAAGCGGGGTGGGTCTCACTTGCGTGGTGGCCC...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTAAGATGGAAAGGAACTaGGTGGAGATGTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLKMERN*VEMSAG
Trigger: GCCTGCAGACATCTCCACTCAGTTCCTTTCCATCTT...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCGAACCACACAGCACCTaGGACGGCAGTGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVEPHST*DGSGTQ
Trigger: CTGAGTCCCACTGCCGTCTCAGGTGCTGTGTGGTTC...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTCAAAGACGGGGACGCTaGCACCCACCATGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARQRRGR*HPPCLC
Trigger: ACACAGGCATGGTGGGTGGCAGCGTCCCCGTCTTTG...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGCCTCCAGCGTTGGTTaGCACGTTTCCCCCGATGTG +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVASSVG*HVSPDV
Trigger: CACATCGGGGGAAACGTGGCAACCAACGCTGGAGGC...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCGGCAGTCCAGGACAGTaGCGTCGGCCAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRGSPGQ*RRPAPL
Trigger: AAGTGGTGCTGGCCGACGGCACTGTCCTGGACTGCC...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGCGCCCGACCAGCTaGATGCACACAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTWRPTS*MHTASM
Trigger: CATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCA...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCGCCGTCACATTGAGGTaGAGGTTACCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFAVTLR*RLPSPR
Trigger: CCTTGGAGATGGTAACCTGCACCTCAATGTGACGGC...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CACGGGGTTAGGGCAGCAGCATGTTCTGTATCTTCACCAGGTGAGGCTCCGACCGCGCTGACGCTGCCCTaGTGCCCGGCCGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: HGVRAAACSVSSPGEAPTALTLP*CPAVHS
Trigger: CGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGC...GGTCGGAGCCTCACCTGGTGAAGATACAGAACATGCTGCTGCCCTAACCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp GGCAGCCAGGAGCGAGGGGCTGAAGGCCTCCGCCGTCACATTGAGGTGCAGGTTAGCAGGGCCTTGAGCTaGTGCATGAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSQERGAEGLRRHIEVQVSRALS*CMSCRA
Trigger: GGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCTGCT...AACCTGCACCTCAATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGCCCGCTGCCCACGCATaGCCGGGGAACGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGPAAHA*PGNEQQ
Trigger: TTGCTGCTCGTTCCCCGGGCATGCGTGGGCAGCGGG...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLTQSTA*PDNCLP
Trigger: GGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGT...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTAGATGTGCATCCAGCTaGATCGCCCAGCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPRCASS*IAQPIR
Trigger: GCGGATGGGCTGGGCGATGCAGCTGGATGCACATCT...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGCCTCCGCCGTCACATTGAGGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCAGGGCAGGGAGCCGCTaGCTGCGCGCCCACGATCAC +
Preference number: 4 (lower is better)
Translates to: GLRRHIEVQVTISKVAIARAGSR*LRAHDH
Trigger: GTGATCGTGGGCGCGCAGCCAGCGGCTCCCTGCCCT...GGCTATGGCCACCTTGGAGATGGTAACCTGCACCTCAATGTGACGGCGGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCCTCCTCCGACGTCCGTaGCCTCAGCAGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPLLRRP*PQQHLA
Trigger: AGCAAGGTGCTGCTGAGGCCACGGACGTCGGAGGAG...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTCAGTGCCTGAGGATGTaGGACACCTCCTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARQCLRM*DTSSDV
Trigger: GACGTCGGAGGAGGTGTCCCACATCCTCAGGCACTG...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAACGTTTCCCCCGATGTaGCAGCTGCCCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPTFPPM*QLPLAP
Trigger: AGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGT...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGT +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPSPGLG*TQDGHR
Trigger: ACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCT...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCCACGTTCACAGCCCTaGGCTTGGGTGGACACAAGA +
Preference number: 4 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSPRSQP*AWVDTR
Trigger: TCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGG...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCGCGTGCTCCAGGAAGTaGCCCAGCTTCTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVACSRK*PSFSAS
Trigger: TGACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGC...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp TCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTATCTTGACTTTCCTCTaGTCGGTGGCCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLRATATPPPESHPPTPSILTFL*SVAMVP
Trigger: TGGGACCATGGCCACCGACCAGAGGAAAGTCAAGAT...ACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS-3UTR CCA 90 bp CACAGCCCTGGGCTTGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAAAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: HSPGLGWTQDGHRGDDPQSPPRA*RAGRGG
Trigger: CCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCT...TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CACGGGGTTAGGGCAGCAGCATGTTCTGTATCTTCACCAGGTGAGGCTCCGACCACGGTGGGCGGGCCGTaGAGGAGGAGGGACACGGCG +
Preference number: 4 (lower is better)
Translates to: HGVRAAACSVSSPGEAPTTVGGP*RRRDTA
Trigger: CGCCGTGTCCCTCCTCCTCCACGGCCCGCCCACCGT...GGTCGGAGCCTCACCTGGTGAAGATACAGAACATGCTGCTGCCCTAACCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCTGGAGGGTCTGGCGGTaGGGACTGGGCATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPWRVWR*GLGILL
Trigger: GAGCAAGATGCCCAGTCCCCACCGCCAGACCCTCCA...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCTGGTGTTGGAGGGTCTaGCGGTGGGGACTGGGCATC +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRWCWRV*RWGLGI
Trigger: GATGCCCAGTCCCCACCGCCAGACCCTCCAACACCA...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
3UTR CAA 72 bp AGGACCTCATCCAACAGGCGTGTTAGTGCTCCAGGGTaGGTGGGGGCTACCAGTGAGGCCGCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTSSNRRVSAPG*VGATSEAAALG
Trigger: CCCCAGGGCAGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGATGAGGTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp ACAAGGGCTGGCTATGGGAACGACACCCGGGGACAGGGGGCACACCACACGGGGGGGCAGTGGAGAGGATaGTCTCGTCAAAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: TRAGYGNDTRGQGAHHTGGQWRG*SRQRRG
Trigger: TCCCCGTCTTTGACGAGATCATCCTCTCCACTGCCC...CCCCGTGTGGTGTGCCCCCTGTCCCCGGGTGTCGTTCCCATAGCCAGCCCTTGT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACTGCCCTCCGACCCGATaGACAGCTGCTTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHCPPTR*TAASGH
Trigger: ATGACCTGAAGCAGCTGTTCATCGGGTCGGAGGGCA...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGTGCCCTCCGACCCGATaGACAGCTGCTTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVCPPTR*TAASGH
Trigger: ATGACCTGAAGCAGCTGTTCATCGGGTCGGAGGGCA...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCCTCCGCCGTCACATTaGGGTGCAGGTTACCATCTC +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHPPPSH*GAGYHL
Trigger: GAGATGGTAACCTGCACCTCAATGTGACGGCGGAGG...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCT +
Preference number: 4 (lower is better)
Translates to: FSRAAALRSSRQPTITAHAAQGS*RAETHS
Trigger: AGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGC...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCACATTCATGACAGAATaGGATGTGCATCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QSHRNTPAREPPADPQWATFMTE*DVHPAA
Trigger: TGCAGCTGGATGCACATCTCATTCTGTCATGAATGT...GGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CACAGCCCTGGGCTTGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAAGGCCTGGACGCTCCCTaGACCAGGGTGGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: HSPGLGWTQDGHRGDDPQGLDAP*TRVGQG
Trigger: ACCCTGCCCCACCCTGGTTCAGGGAGCGTCCAGGCC...TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTCGAGTGACTCCTGTCTaGGACCTGGAGTGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: QQSRSAQVLSATHDHGPRRVTPV*DLECEE
Trigger: CTCTTCGCACTCCAGGTCTCAGACAGGAGTCACTCG...ACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTGGGACACCTCACAGATGTATCTTCACCAGGTaGGGCTCCGACCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: QHRAPWDSGNQAAGTPHRCIFTR*GSDPGQ
Trigger: CTGTCCGGGGTCGGAGCCTCACCTGGTGAAGATACA...TCTGTGAGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGAAGGCGGCCAGGTCCTaGTTAGACACCGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTKAARS*LDTVEN
Trigger: GTTCTCCACGGTGTCTAAGCAGGACCTGGCCGCCTT...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCCCGATGTGGCAGCTaGCCTTGGCTCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRPRCGS*PWLLSP
Trigger: TGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGG...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCTGGACCGAGCCCACGAGCACGAGGGACACCAGGACCATCCTCACAGGGCCTGCCTCCAGCGTTGGTTaGCACGTTTCCCCCGATGTG +
Preference number: 4 (lower is better)
Translates to: SWTEPTSTRDTRTILTGPASSVG*HVSPDV
Trigger: CACATCGGGGGAAACGTGGCAACCAACGCTGGAGGC...AGGCCCTGTGAGGATGGTCCTGGTGTCCCTCGTGCTCGTGGGCTCGGTCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp ACAGCCATGACGGAAGGGGGAGGCGCCCACCTGCAGCTTCAGGTCATGACACGGGCAACCAGTCCACGTTaGGAGCCTGCAGCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: TAMTEGGGAHLQLQVMTRATSPR*EPAALP
Trigger: CGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGC...CCGTGTCATGACCTGAAGCTGCAGGTGGGCGCCTCCCCCTTCCGTCATGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCTGGACCGAGCCCACGAGCACGAGGGACACCAGGACCATCCTCACAGGGCCTCAGTGCCTGAGGATGTaGGACACCTCCTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: SWTEPTSTRDTRTILTGPQCLRM*DTSSDV
Trigger: GACGTCGGAGGAGGTGTCCCACATCCTCAGGCACTG...AGGCCCTGTGAGGATGGTCCTGGTGTCCCTCGTGCTCGTGGGCTCGGTCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTGGGACACCTCACAGAGCCAGGTTCCTCTCGTaGCAGTGCCTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QHRAPWDSGNQAAGTPHRARFLS*QCLRMW
Trigger: CCACATCCTCAGGCACTGCCACGAGAGGAACCTGGC...TCTGTGAGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACAGGACGCAGCCCGCCTaGCAAACCAGAATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHRTQPA*QTRIPD
Trigger: GTCTGGAATTCTGGTTTGCCAGGCGGGCTGCGTCCT...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
CDS-3UTR CCA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGT +
Preference number: 4 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPSPGLG*TQDGHR
Trigger: ACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCT...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGT +
Preference number: 4 (lower is better)
Translates to: SAQVLSATHDHGPRGPARSPGLG*TQDGHR
Trigger: ACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCT...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAAACCTCAGCAAAGCCTaGGCAGCCGAGGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPNLSKA*AAEESH
Trigger: GTGGCTTTCCTCGGCTGCCCAGGCTTTGCTGAGGTT...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS-3UTR CCA 90 bp GGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGTCTCTTGCACCGGGCTaGCCAGGTGGAGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: GAGYHLQGGHSPPRAWRASLAPG*PGGDGA
Trigger: GGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGA...CGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTCTTTCCTCTGGTCGGTaGCCATGGTCCCATCGGTCA +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPLSSGR*PWSHRS
Trigger: TGACCGATGGGACCATGGCCACCGACCAGAGGAAAG...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGTCCACTCGTACACGTaGGGCTCCAGGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAGYHLQGGHSPPRAWRAVHSYT*GSRAAR
Trigger: CCTGGCTGCCCTGGAGCCCCACGTGTACGAGTGGAC...CGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACAAACACACTCTGCAGTaGCCCTTGTCCGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FSRAAALRSSRQPTITAHKHTLQ*PLSVPG
Trigger: CCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCTGGACCGAGCCCACGAGCACGAGGGACACCAGGACCATCCTCACAGGGCCTGACAAGGGCTGGCTATaGGAACGACACCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: SWTEPTSTRDTRTILTGPDKGWL*ERHPGT
Trigger: TGTCCCCGGGTGTCGTTCCCATAGCCAGCCCTTGTC...AGGCCCTGTGAGGATGGTCCTGGTGTCCCTCGTGCTCGTGGGCTCGGTCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GAATCCCCAGGAAGTGGGACAAGAGTGCCTCGTCGGAAGTCGCCCCAGCTGCAGACACGCTGTGGAAGCTaGGGACCCGGTTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: ESPGSGTRVPRRKSPQLQTRCGS*GPGSCG
Trigger: CCCGCATGAACCGGGTCCTCAGCTTCCACAGCGTGT...CTGCAGCTGGGGCGACTTCCGACGAGGCACTCTTGTCCCACTTCCTGGGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CACCAGGCCGGAGCCCAGCGCGTGCTCCAGGAAGTGGCCCAGCTTCTCAGCGTCGACAGTCCCATGCAGTaGGCCATATCGAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: HQAGAQRVLQEVAQLLSVDSPMQ*AISKKP
Trigger: CGGTTTCTTCGATATGGCTCACTGCATGGGACTGTC...GACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGCGCTGGGCTCCGGCCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCTCCCCTTGCAGGTGCTaGAGGTCTGCAGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPSPCRC*RSAEPQ
Trigger: CTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGA...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CTGGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCGGAGCCCAGCGCGTGCTCAGCCTGAAGTCTCGATaGGGACGTAAAACGGACTCT +
Preference number: 4 (lower is better)
Translates to: LVGGHGPIGHQAGAQRVLSLKSR*GRKTDS
Trigger: AGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCT...GAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSQVLKV*RTSAKP
Trigger: AGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTG...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAAGCAGAAACACACTCTaGAGTGGCCCTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPSRNTL*SGPCPC
Trigger: GCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCT...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCGCCTCAGCAGCACCTTaGTACAGCCCACGATCACGT +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPASAAP*YSPRSR
Trigger: ACGTGATCGTGGGCTGTAGCAAGGTGCTGCTGAGGC...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403782.5
CDS-3UTR CCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCATTCCAGACACGCTGTaGAAGCTGAGGACCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVIPDTL*KLRTRF
Trigger: GAACCGGGTCCTCAGCTTCCACAGCGTGTCTGGAAT...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGATTCCAGACACGCTGTaGAAGCTGAGGACCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTIPDTL*KLRTRF
Trigger: GAACCGGGTCCTCAGCTTCCACAGCGTGTCTGGAAT...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
CDS-3UTR CCA 90 bp CCACCTGCAGCTTCAGGTCATGACACGGCACAGAGTGGCAAGGGCCAGGGAAGGGCAGGCCTCCAGCGTTaGTTGCCACGTTTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PPAASGHDTAQSGKGQGRAGLQR*LPRFPR
Trigger: TCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGC...CCTTCCCTGGCCCTTGCCACTCTGTGCCGTGTCATGACCTGAAGCTGCAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACTCACAGCCCTGGGCTTaGGTGGACACAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHSQPWA*VDTRWT
Trigger: TGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGA...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCTCACAGCCCTGGGCTTaGGTGGACACAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVSQPWA*VDTRWT
Trigger: TGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGA...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCTTTCCTCTGGTCGGTaGCCATGGTCCCATCGGTCA +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRLSSGR*PWSHRS
Trigger: TGACCGATGGGACCATGGCCACCGACCAGAGGAAAG...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGCGATCACGGCCCACGTaGTCCTGCCCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQRSRPT*SCPCPR
Trigger: GCGGGGGCACGGGCAGGACCACGTGGGCCGTGATCG...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGAAACACACTCTGCAGTaGCCCTTGTCCGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LHSAEPQRSGPLGNPRSRKHTLQ*PLSVPG
Trigger: CCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT...CCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACTCCTGTCTGAGACCTaGAGTGCGAAGAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPLLSET*SAKSRM
Trigger: CATCCTGCTCTTCGCACTCCAGGTCTCAGACAGGAG...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGCATCTTGCTCAGAGTaGGCAGGAATCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPASCSE*AGIPRK
Trigger: CTTCCTGGGGATTCCTGCCCACTCTGAGCAAGATGC...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACTTAGTGCTCCAGGGTTaGTGGGGGCTACCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSRAAALRSSRQPTITAHLVLQG*WGLPVR
Trigger: CCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAA...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGACAGTCCCATGCAGTaGGCCATATCGAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPDSPMQ*AISKKP
Trigger: CGGTTTCTTCGATATGGCTCACTGCATGGGACTGTC...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGAGAGGTCGTACTTGTAAGGGCGTCCACGGCCTaGGGGACCCGGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: VSHDVVEPLHREGEVVLVRASTA*GTRLHS
Trigger: TGAATGGAGCCGGGTCCCTCAGGCCGTGGACGCCCT...TACAAGTACGACCTCTCCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACATCAATCCCAGACAGTaGATGTCCCAGGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHINPRQ*MSQAPR
Trigger: TCGTGGAGCCTGGGACATTCACTGTCTGGGATTGAT...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CCACCTGCAGCTTCAGGTCATGACACGGCACAGAGTGGCAAGGGCCAGGGAAGGGCACGAAGAGGCGAGTaGCTCCTGTCTGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: PPAASGHDTAQSGKGQGRARRGE*LLSETW
Trigger: CCAGGTCTCAGACAGGAGTCACTCGCCTCTTCGTGC...CCTTCCCTGGCCCTTGCCACTCTGTGCCGTGTCATGACCTGAAGCTGCAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp GTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGGCCGAGAAGGCGGCCAGGTCCTaGTTAGACACCGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VTISKVAIAHHVLGVRAEKAARS*LDTVEN
Trigger: GTTCTCCACGGTGTCTAAGCAGGACCTGGCCGCCTT...CTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGCCCCGCCGGGCACGATaGGCTCAAAGGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQPRRAR*AQRRPG
Trigger: ACCTGGCCGCCTTTGAGCGCATCGTGCCCGGCGGGG...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp CCACCTGCAGCTTCAGGTCATGACACGGCACAGAGTGGCAAGGGCCAGGGAAGGCCCCGATGTGGCAGCTaGCCTTGGCTCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PPAASGHDTAQSGKGQGRPRCGS*PWLLSP
Trigger: TGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGG...CCTTCCCTGGCCCTTGCCACTCTGTGCCGTGTCATGACCTGAAGCTGCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGGCCTCCAGCGTTGGTTaGCACGTTTCCCCCGATGTG +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGASSVG*HVSPDV
Trigger: CACATCGGGGGAAACGTGGCAACCAACGCTGGAGGC...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCCCAGGACAGTCCCATaGAGTGAGCCATATCGAAGA +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHPRTVP*SEPYRR
Trigger: TCTTCGATATGGCTCACTGCATGGGACTGTCCTGGG...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGTGGCGCCCGACCAGCTaGATGCACACAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGWRPTS*MHTASM
Trigger: CATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCA...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGCCGTCACATTGAGGTaGAGGTTACCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVAVTLR*RLPSPR
Trigger: CCTTGGAGATGGTAACCTGCACCTCAATGTGACGGC...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GTCAGTCACGATGTCGTAGAGCCGCTCCACAGGGAGGGAGAGGTCGTACTTGTACTGAAGCCCACTCCGTaGTCCGCGCTGACGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSHDVVEPLHREGEVVLVLKPTP*SALTLP
Trigger: GGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTTCAG...TACAAGTACGACCTCTCCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGAGATGTGCATCCAGCTaGATCGCCCAGCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGRCASS*IAQPIR
Trigger: GCGGATGGGCTGGGCGATGCAGCTGGATGCACATCT...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGCAGCCCCAGAGACGCTaGAGCAGGAGGGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQQPQRR*SRRGPV
Trigger: CACGGGCCCCCTCCTGCTGCAGCGTCTCTGGGGCTG...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACCACTCAGGTCTTCCCTaGACTCAGGACCTCATCCAA +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHHSGLP*TQDLIQ
Trigger: TTGGATGAGGTCCTGAGTGCAGGGAAGACCTGAGTG...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTGCCTTTGGGAATGGCTaGATTTCTCTTAACACAATC +
Preference number: 4 (lower is better)
Translates to: RATATPPPESHPPTPSGPAFGNG*ISLNTI
Trigger: GATTGTGTTAAGAGAAATGCAGCCATTCCCAAAGGC...AGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGGTTTGCGTGGCTTTTaGTTGCTTCGAACTTCCATT +
Preference number: 4 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHGLRGF*LLRTSI
Trigger: AATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACC...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCAGGGCAGGGAGCCGCTaGCTGCGCGCCCACGATCAC +
Preference number: 4 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCRAGSR*LRAHDH
Trigger: GTGATCGTGGGCGCGCAGCCAGCGGCTCCCTGCCCT...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGGCCAGGTTCCTCTCGTaGCAGTGCCTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGARFLS*QCLRMW
Trigger: CCACATCCTCAGGCACTGCCACGAGAGGAACCTGGC...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCTCACAGCCCTGGGCTTaGGTGGACACAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPSQPWA*VDTRWT
Trigger: TGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGA...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCACCGGGCTGGCCAGGTaGAGATGGCGCCCGACCAGC +
Preference number: 4 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCTGLAR*RWRPTS
Trigger: GCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGT...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGCCCGCCGACCCCCAGTaGGCCTTGGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQPADPQ*ALAAAG
Trigger: TCCTGCTGCTGCCAAGGCCCACTGGGGGTCGGCGGG...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGATCACGGCCCACGTaGTCCTGCCCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPIRSRPT*SCPCPR
Trigger: GCGGGGGCACGGGCAGGACCACGTGGGCCGTGATCG...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGAAACACACTCTGCAGTaGCCCTTGTCCGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGKHTLQ*PLSVPG
Trigger: CCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAATCCCCAGGAAGTGGGACAAGAGTGCCTCGTCGGAAGTCGCCCCAGCTGCAGGAGTCACACAGGCAGTaGGGACAACAGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ESPGSGTRVPRRKSPQLQESHRQ*GQQQGP
Trigger: TGGGCCCTGCTGTTGTCCCCACTGCCTGTGTGACTC...CTGCAGCTGGGGCGACTTCCGACGAGGCACTCTTGTCCCACTTCCTGGGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCGGGGCCCTGGAGAGCTaGACCGAGCCCACGAGCACG +
Preference number: 4 (lower is better)
Translates to: QNPKLRAQLALITVFPAGGALES*TEPTST
Trigger: CGTGCTCGTGGGCTCGGTCCAGCTCTCCAGGGCCCC...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGGCCTGTGGTTTGCGTaGCTTTTGCTTGCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPGLWFA*LLLASN
Trigger: GTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCC...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGGGGCAGTGGAGAGGATaGTCTCGTCAAAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGGQWRG*SRQRRG
Trigger: TCCCCGTCTTTGACGAGATCATCCTCTCCACTGCCC...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGCCTGCGTTGGAGCCTaGAGTCTCGATGAGGACGTA +
Preference number: 4 (lower is better)
Translates to: GAGYHLQGGHSPPRAWRAACVGA*SLDEDV
Trigger: TACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGC...CGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGCCTCCGCCGTCACATTaGGGTGCAGGTTACCATCTC +
Preference number: 4 (lower is better)
Translates to: GAGYHLQGGHSPPRAWRAPPPSH*GAGYHL
Trigger: GAGATGGTAACCTGCACCTCAATGTGACGGCGGAGG...CGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR TCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGCCAGGAGCGAGGGGCTaGAGGCCTCCGCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQPGARG*RPPPSH
Trigger: ATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGG...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGGGCGTCCACGGCCTaGGGGACCCGGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: QNPKLRAQLALITVFPAGRASTA*GTRLHS
Trigger: TGAATGGAGCCGGGTCCCTCAGGCCGTGGACGCCCT...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CACGGGGTTAGGGCAGCAGCATGTTCTGTATCTTCACCAGGTGAGGCTCCGACCGCCTCAGCAGCACCTTaGTACAGCCTCGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: HGVRAAACSVSSPGEAPTASAAP*YSLAAS
Trigger: GGACGCTGCGAGGCTGTAGCAAGGTGCTGCTGAGGC...GGTCGGAGCCTCACCTGGTGAAGATACAGAACATGCTGCTGCCCTAACCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCCCCAGGACAGTCCCATaGAGTGAGCCATATCGAAGA +
Preference number: 4 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPPRTVP*SEPYRR
Trigger: TCTTCGATATGGCTCACTGCATGGGACTGTCCTGGG...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACCCCAGGACAGTCCCATaGAGTGAGCCATATCGAAGA +
Preference number: 4 (lower is better)
Translates to: FSRAAALRSSRQPTITAHPRTVP*SEPYRR
Trigger: TCTTCGATATGGCTCACTGCATGGGACTGTCCTGGG...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGATCCATGAACTCGAATaGAGACAGGATCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPIHELE*RQDLTQ
Trigger: CTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGAT...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCTGACGCTGCCCTGCTaGCCGGCCGTCCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCLTLPC*PAVHSY
Trigger: GTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAG...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGCCCGCTGCCCACGCATaGCCGGGGAACGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQPAAHA*PGNEQQ
Trigger: TTGCTGCTCGTTCCCCGGGCATGCGTGGGCAGCGGG...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SRAAALRSSRQPTITAHVTQSTA*PDNCLP
Trigger: GGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGT...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SRSAQVLSATHDHGPRGPTQSTA*PDNCLP
Trigger: GGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGT...AGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CACAGCCCTGGGCTTGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAACTGAGTGGAGATGTCTaGAGGCGGGCAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HSPGLGWTQDGHRGDDPQLSGDV*RRAAPE
Trigger: CTCTGGGGCTGCCCGCCTGCAGACATCTCCACTCAG...TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGCCACGTTCACAGCCCTaGGCTTGGGTGGACACAAGA +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGPRSQP*AWVDTR
Trigger: TCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGG...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGGCCGAAGCTTCTCAGCGTCATaGCCTGCGTTGGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GYHLQGGHSPPRAWRAGRSFSAS*PALEPE
Trigger: TTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCT...TCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGCTTTCCTCTGGTCGGTaGCCATGGTCCCATCGGTCA +
Preference number: 4 (lower is better)
Translates to: GAGYHLQGGHSPPRAWRALSSGR*PWSHRS
Trigger: TGACCGATGGGACCATGGCCACCGACCAGAGGAAAG...CGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCCTGCAGGGCCCCCGGTaGCTTGCTGTAGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QNPKLRAQLALITVFPAGLQGPR*LAVAQD
Trigger: GTCCTGGGCTACAGCAAGCCACCGGGGGCCCTGCAG...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACGATCACGGCCCACGTaGTCCTGCCCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPRSRPT*SCPCPR
Trigger: GCGGGGGCACGGGCAGGACCACGTGGGCCGTGATCG...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACAACTGTCTTCCCAGCTaGCAGCCCTCTAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHNCLPS*QPSRRC
Trigger: ACATCTTCTAGAGGGCTGCCAGCTGGGAAGACAGTT...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAATGCGGCAGCCGGGCTaGCCTCGGGCTCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPMRQPG*PRAPRT
Trigger: GGTCCTGGGAGCCCGAGGCCAGCCCGGCTGCCGCAT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGCAACAGGCAGCCTTTaGGAATGGCTGCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPATGSL*EWLHFS
Trigger: AGAGAAATGCAGCCATTCCCAAAGGCTGCCTGTTGC...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCGTGTGGCTCCAACCCTaGAATCAATCCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRVWLQP*NQSQTV
Trigger: CACTGTCTGGGATTGATTCCAGGGTTGGAGCCACAC...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGACATTCATGACAGAATaGGATGTGCATCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPTFMTE*DVHPAA
Trigger: TGCAGCTGGATGCACATCTCATTCTGTCATGAATGT...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGTTCTTTACTGGACATTCATaGCAGAATGAGATGTGCATC +
Preference number: 4 (lower is better)
Translates to: LCSGPCPCRGPRPQHRTFFTGHS*QNEMCI
Trigger: GATGCACATCTCATTCTGTCATGAATGTCCAGTAAA...GAACGTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGTCCACGTTGGGAGCCTaGAGCGCTTCCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQSTLGA*SASGSV
Trigger: CACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGA...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp AGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCATCCATGAACTCGAATaGAGACAGGATCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: RAAALRSSRQPTITAHVVIHELE*RQDLTQ
Trigger: CTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGAT...GACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGGCCGTCACATTGAGGTaGAGGTTACCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LHSAEPQRSGPLGNPRSRAVTLR*RLPSPR
Trigger: CCTTGGAGATGGTAACCTGCACCTCAATGTGACGGC...CCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCTGACGCTGCCCTGCTaGCCGGCCGTCCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPILTLPC*PAVHSY
Trigger: GTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAG...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCTGACGCTGCCCTGCTaGCCGGCCGTCCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: RAQTDRPVVCVAFACFELLTLPC*PAVHSY
Trigger: GTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAG...AAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CACAGCCCTGGGCTTGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAAAGATGTGCATCCAGCTaGATCGCCCAGCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: HSPGLGWTQDGHRGDDPQRCASS*IAQPIR
Trigger: GCGGATGGGCTGGGCGATGCAGCTGGATGCACATCT...TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CCACGACAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTGGGACACCTTGCGTGGCTTTTGCTTaGTTCGAACTTCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: PRQHRAPWDSGNQAAGTPCVAFA*FELPLW
Trigger: CCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCA...AGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTGTCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp TCCAACAGGCGTGTTAGTGCTCCAGGGTTGGTGGGGGCTACCAGTGAGGCCGCTTCACAGCCCTGGGCTTaGGTGGACACAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: SNRRVSAPGLVGATSEAASQPWA*VDTRWT
Trigger: TGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGA...AGCGGCCTCACTGGTAGCCCCCACCAACCCTGGAGCACTAACACGCCTGTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCGTCCACTCGTACACGTaGGGCTCCAGGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCVHSYT*GSRAAR
Trigger: CCTGGCTGCCCTGGAGCCCCACGTGTACGAGTGGAC...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCGTCCACTCGTACACGTaGGGCTCCAGGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QNPKLRAQLALITVFPAGVHSYT*GSRAAR
Trigger: CCTGGCTGCCCTGGAGCCCCACGTGTACGAGTGGAC...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGGCCGTCAGGCCTGGCTaGGCAGCGTCTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQAVRPG*AASCRG
Trigger: ACCCCTACAAGACGCTGCCCAGCCAGGCCTGACGGC...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAATCCCCAGGAAGTGGGACAAGAGTGCCTCGTCGGAAGTCGCCCCAGCTGCAGTGGAAAGGAACTGAGTaGAGATGTCTGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ESPGSGTRVPRRKSPQLQWKGTE*RCLQAG
Trigger: GCCCGCCTGCAGACATCTCCACTCAGTTCCTTTCCA...CTGCAGCTGGGGCGACTTCCGACGAGGCACTCTTGTCCCACTTCCTGGGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTAGAGGGGGCGTATCTTaGGAATTCTGCAAACACAGA +
Preference number: 4 (lower is better)
Translates to: QQSRSAQVLSATHDHGPRRGGVS*EFCKHR
Trigger: TCTGTGTTTGCAGAATTCCCAAGATACGCCCCCTCT...ACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGGACAGTCCCATGCAGTaGGCCATATCGAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGDSPMQ*AISKKP
Trigger: CGGTTTCTTCGATATGGCTCACTGCATGGGACTGTC...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CGGACTCTCTTGCACCGGGCTGGCCAGGTGGAGATGGCGCCCGACCAGCTGCATACATTCATGACAGAATaGGATGTGCATCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTLLHRAGQVEMAPDQLHTFMTE*DVHPAA
Trigger: TGCAGCTGGATGCACATCTCATTCTGTCATGAATGT...ATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGAGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCGCCCAGCCCATCCGCTaGCCAGGGCAGCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPAQPIR*PGQLTS
Trigger: GCTCGTCAGCTGCCCTGGGCAGCGGATGGGCTGGGC...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCCTGCAGGGCCCCCGGTaGCTTGCTGTAGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPLQGPR*LAVAQD
Trigger: GTCCTGGGCTACAGCAAGCCACCGGGGGCCCTGCAG...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTGCCGTCAGGCCTGGCTaGGCAGCGTCTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RAQTDRPVVCVAFACFELAVRPG*AASCRG
Trigger: ACCCCTACAAGACGCTGCCCAGCCAGGCCTGACGGC...AAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCGGCAATCAGGCGGCTaGGACACCTCACAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCRQSGG*DTSQKG
Trigger: CCCCTTCTGTGAGGTGTCCCAGCCGCCTGATTGCCG...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCGCGCTTCCGGGTCCGTaGCGACCCCGCCGGGCACGA +
Preference number: 4 (lower is better)
Translates to: RFLLDIHDRMRCASSCIAALPGP*RPRRAR
Trigger: TCGTGCCCGGCGGGGTCGTCACGGACCCGGAAGCGC...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR TCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGTGCACACAGCATCCATaGACTCGAATGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGCTQHP*TRMQTG
Trigger: TCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCA...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGGGGCCCACAGCATCTTaGCTTTCCTCTGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQGPTAS*LSSGRW
Trigger: CCACCGACCAGAGGAAAGTCAAGATGCTGTGGGCCC...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS-3UTR TCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGACAGCATCTAGAGGATaGGACGAGATGAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGTASRG*DEMRQG
Trigger: CCCTTGTCTCATCTCGTCTCATCCTCTAGATGCTGT...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCCACCATGCCTGTGTTaGCCCCCTGTGGGTTCACGG +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPIPPCLC*PPVGSR
Trigger: CCGTGAACCCACAGGGGGGCAACACAGGCATGGTGG...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGCCTCCGCCGTCACATTGAGGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCCCCAGGACAGTCCCATaGAGTGAGCCATATCGAAGA +
Preference number: 4 (lower is better)
Translates to: GLRRHIEVQVTISKVAIAPRTVP*SEPYRR
Trigger: TCTTCGATATGGCTCACTGCATGGGACTGTCCTGGG...GGCTATGGCCACCTTGGAGATGGTAACCTGCACCTCAATGTGACGGCGGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAAGGGCCTTGAGCTGCTaGATGAGCTGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPRALSC*MSCRAP
Trigger: GGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGTGTGGCAGCTGCCCTTaGCTCCTAAGTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: EPETQSTACPDNCLPSWQCGSCP*LLSPAA
Trigger: TGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACA...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCTCTCTTGCACCGGGCTaGCCAGGTGGAGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPSLAPG*PGGDGA
Trigger: GGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGA...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCGCGTGCTCCAGGAAGTaGCCCAGCTTCTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCACSRK*PSFSAS
Trigger: TGACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGC...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCCTGCAGGGCCCCCGGTaGCTTGCTGTAGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPLQGPR*LAVAQD
Trigger: GTCCTGGGCTACAGCAAGCCACCGGGGGCCCTGCAG...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCTCTCGTGGCAGTGCCTaGGGATGTGGGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPISRGSA*GCGTPP
Trigger: AGGAGGTGTCCCACATCCTCAGGCACTGCCACGAGA...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCGGGCAGTGGAGAGGATaGTCTCGTCAAAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: QNPKLRAQLALITVFPAGGQWRG*SRQRRG
Trigger: TCCCCGTCTTTGACGAGATCATCCTCTCCACTGCCC...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAAGCAGGGCCTTGAGCTaGTGCATGAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPSRALS*CMSCRA
Trigger: GGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCTGCT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGAAGCCGACCCTCAAGTaGAAAGATGGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGKPTLK*KDGKEL
Trigger: CAGTTCCTTTCCATCTTTGCACTTGAGGGTCGGCTT...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCTGTGGCAGCTGCCCTTaGCTCCTAAGTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPICGSCP*LLSPAA
Trigger: TGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACA...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGGCCGTCAGGCCTGGCTaGGCAGCGTCTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQAVRPG*AASCRG
Trigger: ACCCCTACAAGACGCTGCCCAGCCAGGCCTGACGGC...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCAAACACACTCTGCAGTaGCCCTTGTCCGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPIKHTLQ*PLSVPG
Trigger: CCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCCATTGCCGCCAGACACGCTGTaGAAGCTGAGGACCCGGTTC +
Preference number: 4 (lower is better)
Translates to: QTDRPVVCVAFACFELPLPPDTL*KLRTRF
Trigger: GAACCGGGTCCTCAGCTTCCACAGCGTGTCTGGCGG...CAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp CTGGTCGGTGGCCATGGTCCCATCGGTCACCAGGCCGGAGCCCAGCGCGTGCTCCAATGCAAAGGCATGTaGATATCAGAGAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: LVGGHGPIGHQAGAQRVLQCKGM*ISEKNF
Trigger: AAAATTCTTCTCTGATATCCACATGCCTTTGCATTG...GAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGCGAGGGGCTGAAGGCCTCCGCCGTCACATTGAGGTGCAGGTTTTCGAACTTCCATTGTaGAGATCTGTAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSQERGAEGLRRHIEVQVFELPL*RSVDSA
Trigger: AGCTGAGTCTACAGATCTCCACAATGGAAGTTCGAA...AACCTGCACCTCAATGTGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAGCGTCTTGTAGGGGTTaGGGATGCCCTTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPASCRG*GCPWGP
Trigger: TGGACCCCAAGGGCATCCTCAACCCCTACAAGACGC...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACTTTACTGGACATTCATaGCAGAATGAGATGTGCATC +
Preference number: 4 (lower is better)
Translates to: FSRAAALRSSRQPTITAHFTGHS*QNEMCI
Trigger: GATGCACATCTCATTCTGTCATGAATGTCCAGTAAA...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCCAAAGACGGGGACGCTaGCACCCACCATGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPQRRGR*HPPCLC
Trigger: ACACAGGCATGGTGGGTGGCAGCGTCCCCGTCTTTG...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCCCCCGATGTGGCAGCTaGCCTTGGCTCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPPRCGS*PWLLSP
Trigger: TGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGG...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp GGCCTCCGCCGTCACATTGAGGTGCAGGTTACCATCTCCAAGGTGGCCATAGCCGAGACAGGGAGGCAATaGAAAGGCATGTGGATATCA +
Preference number: 4 (lower is better)
Translates to: GLRRHIEVQVTISKVAIAETGRQ*KGMWIS
Trigger: TGATATCCACATGCCTTTGCATTGCCTCCCTGTCTC...GGCTATGGCCACCTTGGAGATGGTAACCTGCACCTCAATGTGACGGCGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CCA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCAGGGCAGGGAGCCGCTaGCTGCGCGCCCACGATCAC +
Preference number: 4 (lower is better)
Translates to: RFLLDIHDRMRCASSCIARAGSR*LRAHDH
Trigger: GTGATCGTGGGCGCGCAGCCAGCGGCTCCCTGCCCT...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CCA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGCTCCTCCGACGTCCGTaGCCTCAGCAGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQLLRRP*PQQHLA
Trigger: AGCAAGGTGCTGCTGAGGCCACGGACGTCGGAGGAG...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCTGTGGCAGCTGCCCTTaGCTCCTAAGTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPCGSCP*LLSPAA
Trigger: TGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACA...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp TCTGAGGAGGAGCAGACGGTGCTGGTGGCTGAAGCAGAACCGGGCCAAATCCTAAGACAGATCGGCCTGTaGTTTGCGTGGCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SEEEQTVLVAEAEPGQILRQIGL*FAWLLL
Trigger: AAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCT...TAGGATTTGGCCCGGTTCTGCTTCAGCCACCAGCACCGTCTGCTCCTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGGCTGCCCAGGGCAGCTaGCGAGCAGAAACACACTCT +
Preference number: 4 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQAAQGS*RAETHS
Trigger: AGAGTGTGTTTCTGCTCGTCAGCTGCCCTGGGCAGC...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAAGGACGCAGCCCGCCTaGCAAACCAGAATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPRTQPA*QTRIPD
Trigger: GTCTGGAATTCTGGTTTGCCAGGCGGGCTGCGTCCT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
CDS-3UTR CCA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTGTGGCAGCTGCCCTTaGCTCCTAAGTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQCGSCP*LLSPAA
Trigger: TGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACA...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCACGTTTCCCCCGATGTaGCAGCTGCCCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPTFPPM*QLPLAP
Trigger: AGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGT...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR CAA 72 bp AACTCGAATGCAGACAGGATCTCACCCAGCATCCCCTaGCAGGTGCTGAAGGTCTGCAGAACCTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NSNADRISPSIP*QVLKVCRTSAK
Trigger: CTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGCATTCGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCGGGCAGTGGAGAGGATaGTCTCGTCAAAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPGQWRG*SRQRRG
Trigger: TCCCCGTCTTTGACGAGATCATCCTCTCCACTGCCC...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGAAGGCGGCCAGGTCCTaGTTAGACACCGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQKAARS*LDTVEN
Trigger: GTTCTCCACGGTGTCTAAGCAGGACCTGGCCGCCTT...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR GCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAAGCAGAAACACACTCTaGAGTGGCCCTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPSRNTL*SGPCPC
Trigger: GCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATTCCAGACACGCTGTaGAAGCTGAGGACCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPIPDTL*KLRTRF
Trigger: GAACCGGGTCCTCAGCTTCCACAGCGTGTCTGGAAT...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
CDS-3UTR CCA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGT +
Preference number: 4 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQSPGLG*TQDGHR
Trigger: ACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCT...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAACTGTCTTCCCAGCTaGCAGCCCTCTAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: QNPKLRAQLALITVFPAGNCLPS*QPSRRC
Trigger: ACATCTTCTAGAGGGCTGCCAGCTGGGAAGACAGTT...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAGACAGTCCCATGCAGTaGGCCATATCGAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPDSPMQ*AISKKP
Trigger: CGGTTTCTTCGATATGGCTCACTGCATGGGACTGTC...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCGGCAGTCCAGGACAGTaGCGTCGGCCAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: RFLLDIHDRMRCASSCIAGSPGQ*RRPAPL
Trigger: AAGTGGTGCTGGCCGACGGCACTGTCCTGGACTGCC...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp ATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCATCCATGAACTCGAATaGAGACAGGATCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: IHDRMRCASSCIAQPIRCIHELE*RQDLTQ
Trigger: CTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGAT...GCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp CAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCCATTGGCCGTCACATTGAGGTaGAGGTTACCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QTDRPVVCVAFACFELPLAVTLR*RLPSPR
Trigger: CCTTGGAGATGGTAACCTGCACCTCAATGTGACGGC...CAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR GCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCACTCAGAGCACAGCTTaGCCTGATAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPITQSTA*PDNCLP
Trigger: GGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGT...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCAGCTTCTCAGCGTCATaGCCTGCGTTGGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPSFSAS*PALEPE
Trigger: TTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCT...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCTGCACACAGCATCCATaGACTCGAATGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPCTQHP*TRMQTG
Trigger: TCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCA...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAAGCCTGAAGTCTCGATaGGGACGTAAAACGGACTCT +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPSLKSR*GRKTDS
Trigger: AGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCGCGTGCTCCAGGAAGTaGCCCAGCTTCTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: RFLLDIHDRMRCASSCIAACSRK*PSFSAS
Trigger: TGACGCTGAGAAGCTGGGCCACTTCCTGGAGCACGC...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCATCTTGACTTTCCTCTaGTCGGTGGCCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPILTFL*SVAMVP
Trigger: TGGGACCATGGCCACCGACCAGAGGAAAGTCAAGAT...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS-3UTR CCA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAAACTGTCTTCCCAGCTaGCAGCCCTCTAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPNCLPS*QPSRRC
Trigger: ACATCTTCTAGAGGGCTGCCAGCTGGGAAGACAGTT...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
3UTR CAA 72 bp GTGGTTTGCGTGGCTTTTGCTTGCTTCGAACTTCCATaGTGGAGATCTGTAGACTCAGCTACTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VVCVAFACFELP*WRSVDSATREA
Trigger: AGCCTCCCGAGTAGCTGAGTCTACAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR TCA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCACATTCATGACAGAATaGGATGTGCATCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LDIHDRMRCASSCIAQPITFMTE*DVHPAA
Trigger: TGCAGCTGGATGCACATCTCATTCTGTCATGAATGT...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR GCA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RFLLDIHDRMRCASSCIAQVLKV*RTSAKP
Trigger: AGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTG...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCTTTACTGGACATTCATaGCAGAATGAGATGTGCATC +
Preference number: 4 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPFTGHS*QNEMCI
Trigger: GATGCACATCTCATTCTGTCATGAATGTCCAGTAAA...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CCA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCAACTGTCTTCCCAGCTaGCAGCCCTCTAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: RFLLDIHDRMRCASSCIANCLPS*QPSRRC
Trigger: ACATCTTCTAGAGGGCTGCCAGCTGGGAAGACAGTT...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR TCA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCTTTACTGGACATTCATaGCAGAATGAGATGTGCATC +
Preference number: 4 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPFTGHS*QNEMCI
Trigger: GATGCACATCTCATTCTGTCATGAATGTCCAGTAAA...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp GAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTCGCAACCAGTCCACGTaGGGAGCCTGCAGCGCTTCC +
Preference number: 5 (lower is better)
Translates to: EPPQHPRPRATRRPPVGLRNQST*GACSAS
Trigger: GGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCG...AAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS TCA 90 bp TCCGCAACCAGTCCACGTTGGGAGCCTGCAGCGCTTCCGGGTCCGTaGCGACCCCGCCGGGCACGATGCGCTCAAAGGCGGCCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: SATSPRWEPAALPGP*RPRRARCAQRRPGP
Trigger: AGGACCTGGCCGCCTTTGAGCGCATCGTGCCCGGCGGGGTCGTCACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
ENST00000463932.1
CDS GCA 90 bp TTGCTACAGCCTCGCAGCGTCCGCAACCAGTCCACGTTGGGAGCCTaGAGCGCTTCCGGGTCCGTGACGACCCCGCCGGGCACGATGCGC +
Preference number: 5 (lower is better)
Translates to: LLQPRSVRNQSTLGA*SASGSVTTPPGTMR
Trigger: GCGCATCGTGCCCGGCGGGGTCGTCACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCGGACGCTGCGAGGCTGTAGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS GCA 90 bp CCTGTCTCTACTCGCAGCGTCCGCAACCAGTCCACGTTGGGAGCCTaGAGCGCTTCCGGGTCCGTGACGACCCCGCCGGGCACGATGCGC +
Preference number: 5 (lower is better)
Translates to: PVSTRSVRNQSTLGA*SASGSVTTPPGTMR
Trigger: GCGCATCGTGCCCGGCGGGGTCGTCACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCGGACGCTGCGAGTAGAGACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463932.1
CDS-3UTR CAA 90 bp CGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTTGGCAGCAGTAAAACGGACTCTCTaGCACCGGGCTGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RNTPAREPPADPQWALAAVKRTL*HRAGQV
Trigger: CACCTGGCCAGCCCGGTGCAAGAGAGTCCGTTTTAC...TGCTGCCAAGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp AGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCCCGTGACCCCCAGTGGGCCTaGGCAGCAGCAGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: SAQVLSATHDHGPRGPARDPQWA*AAAGVA
Trigger: GGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTC...ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCGACCCCCAGTGGGCCTaGGCAGCAGCAGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPDPQWA*AAAGVA
Trigger: GGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTC...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CGGACTCTCTTGCACCGGGCTGGCCAGGTGGAGATGGCGCCCGACCAGCTGCATGACCCCCAGTGGGCCTaGGCAGCAGCAGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: RTLLHRAGQVEMAPDQLHDPQWA*AAAGVA
Trigger: GGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTC...ATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGAGAGTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CAA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHTLQWP*SVPGPS
Trigger: CGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGT...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SRAAALRSSRQPTITAHVTLQWP*SVPGPS
Trigger: CGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGT...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp AGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACCCCCAGTGGGCCTGTTAGTGCTCCAGGGTaGGTGGGGGCTACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RATATPPPESHPPTPSGPVSAPG*VGATSE
Trigger: CTCACTGGTAGCCCCCACCAACCCTGGAGCACTAAC...AGGCCCACTGGGGGTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CAA 90 bp AAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCGCAACCAGTCCACGTaGGGAGCCTGCAGCGCTTCC +
Preference number: 5 (lower is better)
Translates to: KHTLQWPLSVPGPSPAAPRNQST*GACSAS
Trigger: GGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCG...CGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CAA 90 bp TCCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGGCCTCCAGCGTTGGTaGCCACGTTTCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: SVLRADAALLPGRPLVHVGLQRW*PRFPRC
Trigger: ACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCC...CACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CAA 90 bp AGGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCCGCAGGCCTCCAGCGTaGGTTGCCACGTTTCCCCCG +
Preference number: 5 (lower is better)
Translates to: RDPAPFSRAAALRSSRQPRRPPA*VATFPP
Trigger: CGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCG...GGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CGGCTCATCCCTCAGAGCCACCGCAACACCCCCGCCCGAGAGCCACCCGCCGACGCGTCATGGCCTGCGTaGGAGCCTGAAGTCTCGATG +
Preference number: 5 (lower is better)
Translates to: RLIPQSHRNTPAREPPADASWPA*EPEVSM
Trigger: CATCGAGACTTCAGGCTCCAACGCAGGCCATGACGC...GTCGGCGGGTGGCTCTCGGGCGGGGGTGTTGCGGTGGCTCTGAGGGATGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS CCA 90 bp TCCAGAGAGAAGGTCTCACAGGCGCAGAGGCTGGGGGCAGACACCTaGAGTGCGAAGAGCAGGATGCGGCAGCCGGGCTGGCCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: SREKVSQAQRLGADT*SAKSRMRQPGWPRA
Trigger: AGCCCGAGGCCAGCCCGGCTGCCGCATCCTGCTCTTCGCACTCCAGGTGTCTGCCCCCAGCCTCTGCGCCTGTGAGACCTTCTCTCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496252.5
CDS-3UTR CAA 90 bp TCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGCGCAACCAGTCCACGTaGGGAGCCTGCAGCGCTTCC +
Preference number: 5 (lower is better)
Translates to: SAEPQRSGPLGNPRSRPTRNQST*GACSAS
Trigger: GGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCG...CGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CAA 90 bp GAGCACCTCAAGGCCTGTGACCCGAGCACCATGTCGGGGTGTGGCTGCAGACGCCGCAGGCCTCCAGCGTaGGTTGCCACGTTTCCCCCG +
Preference number: 5 (lower is better)
Translates to: EHLKACDPSTMSGCGCRRRRPPA*VATFPP
Trigger: CGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCG...GCGTCTGCAGCCACACCCCGACATGGTGCTCGGGTCACAGGCCTTGAGGTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CAA 90 bp CACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCCCGCAGCACCGCACGCCTCCGCCGTCACATaGAGGTGCAGGTTACCATCT +
Preference number: 5 (lower is better)
Translates to: HTLQWPLSVPGPSPAAPHASAVT*RCRLPS
Trigger: AGATGGTAACCTGCACCTCAATGTGACGGCGGAGGC...GTGCGGTGCTGCGGGCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp AGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGATGTGGCAGCTGCCCTaGGCTCCTAAGTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SRAAALRSSRQPTITAHVMWQLP*APKSSG
Trigger: GCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACAT...CACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp GTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGGCCGAGCGCAGGCCTCCAGCGTaGGTTGCCACGTTTCCCCCG +
Preference number: 5 (lower is better)
Translates to: VTISKVAIAHHVLGVRAERRPPA*VATFPP
Trigger: CGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCG...CTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CAA 90 bp GACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCCGCTGCCCAGGGACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: DRMRCASSCIAQPIRCPGTLQWP*SVPGPS
Trigger: CGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGT...CCCTGGGCAGCGGATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS GCA 90 bp TGGGTGGGTGAGCTGGGCAGCCACGAGGAGCACGAGGACTGGCACTaGAACAAACAGCCCAGGGTTTGCCTGGCAGGTGCACGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: WVGELGSHEEHEDWH*NKQPRVCLAGARLV
Trigger: CACCAGGCGTGCACCTGCCAGGCAAACCCTGGGCTGTTTGTTGCAGTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS-3UTR CAA 90 bp CTGACGAGCAGAAACACACTCTGCAGTGGCCCTTGTCCGTGCCGGGGCCCTCGCGGCCTCCAGCGTTGGTaGCCACGTTTCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: LTSRNTLCSGPCPCRGPRGLQRW*PRFPRC
Trigger: ACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCC...GCGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGTGTGTTTCTGCTCGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCATCACCCAGCATCCCCTaGCAGGTGCTGAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPSPSIP*QVLKVC
Trigger: GCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGA...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCAGCGTCATGGCCTGCGTaGGAGCCTGAAGTCTCGATG +
Preference number: 5 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPASWPA*EPEVSM
Trigger: CATCGAGACTTCAGGCTCCAACGCAGGCCATGACGC...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CCGTGCTCCGCGCTGACGCTGCCCTGCTGCCCGGCCGTCCACTCGTACACGTGGAGCAACAGGCAGCCTTaGGGAATGGCTGCATTTCTC +
Preference number: 5 (lower is better)
Translates to: PCSALTLPCCPAVHSYTWSNRQP*GMAAFL
Trigger: GAGAAATGCAGCCATTCCCAAAGGCTGCCTGTTGCT...CCACGTGTACGAGTGGACGGCCGGGCAGCAGGGCAGCGTCAGCGCGGAGCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS CCA 90 bp CTCATGTGGGTGGGTGAGCTGGGCAGCCACGAGGAGCACGAGGACTaGCACTGCAACAAACAGCCCAGGGTTTGCCTGGCAGGTGCACGC +
Preference number: 5 (lower is better)
Translates to: LMWVGELGSHEEHED*HCNKQPRVCLAGAR
Trigger: GCGTGCACCTGCCAGGCAAACCCTGGGCTGTTTGTTGCAGTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS-3UTR CAA 90 bp CATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCTCACCCAGCATCCCCTaGCAGGTGCTGAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: HSAEPQRSGPLGNPRSRPSPSIP*QVLKVC
Trigger: GCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGA...GGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CCACGACAGCACCGAGCACCCTGGGACTCCGGCAATCAGGCGGCTGGGACACCTGCCTCCGCCGTCACATaGAGGTGCAGGTTACCATCT +
Preference number: 5 (lower is better)
Translates to: PRQHRAPWDSGNQAAGTPASAVT*RCRLPS
Trigger: AGATGGTAACCTGCACCTCAATGTGACGGCGGAGGC...AGGTGTCCCAGCCGCCTGATTGCCGGAGTCCCAGGGTGCTCGGTGCTGTCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS-3UTR CAA 90 bp GGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGTGAGAGCGAGACCCTaGACTTTCCTCTGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: GPGSIQQSRSAQVLSATHVRARP*TFLWSV
Trigger: CACCGACCAGAGGAAAGTCAAGGGTCTCGCTCTCAC...GTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS CCA 90 bp CCACCCAAGTCCCCCTTCAAAGCAGCAACATCAGCCCGACTCATGTaGGTGGGTGAGCTGGGCAGCCACGAGGAGCACGAGGACTGGCAC +
Preference number: 5 (lower is better)
Translates to: PPKSPFKAATSARLM*VGELGSHEEHEDWH
Trigger: GTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTGCTTTGAAGGGGGACTTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS-3UTR CAA 90 bp TTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGAC +
Preference number: 5 (lower is better)
Translates to: FSRAAALRSSRQPTITAHFTALG*GGHKMD
Trigger: GTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAA...GTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS CCA 90 bp GCCTGGGCAGCCGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: AWAAEESHVHSPGLG*TQDGHRGDDPQSAL
Trigger: GAGGGCACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGGCTGCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS CCA 90 bp CGGGCTCCCAGGACCACAGGCGGGCGGCACACAGGTGACTGCAGTTaGAGTGGGATCAGAGCAGAACACAGAAAACCGAGGAAAGCCACG +
Preference number: 5 (lower is better)
Translates to: RAPRTTGGRHTGDCS*SGIRAEHRKPRKAT
Trigger: CGTGGCTTTCCTCGGTTTTCTGTGTTCTGCTCTGATCCCACTCCAACTGCAGTCACCTGTGTGCCGCCCGCCTGTGGTCCTGGGAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417686.1
CDS CCA 90 bp CCAAGTCCCCCTTCAAAGCAGCAACATCAGCCCGACTCATGTGGGTaGGTGAGCTGGGCAGCCACGAGGAGCACGAGGACTGGCACTGCA +
Preference number: 5 (lower is better)
Translates to: PSPPSKQQHQPDSCG*VSWAATRSTRTGTA
Trigger: TGCAGTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTGCTTTGAAGGGGGACTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS-3UTR CAA 90 bp GGTTACCATCTCCAAGGTGGCCATAGCCCACCACGTGCTTGGCGTGCGGGCCGAGCCTCCGCCGTCACATaGAGGTGCAGGTTACCATCT +
Preference number: 5 (lower is better)
Translates to: GYHLQGGHSPPRAWRAGRASAVT*RCRLPS
Trigger: AGATGGTAACCTGCACCTCAATGTGACGGCGGAGGC...TCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400769.6
ENST00000436747.5
CDS-3UTR CAA 90 bp GGGACCCGGCTCCATTCAGCAGAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACAGAGGGGGCGTATCTaGGGAATTCTGCAAACACAG +
Preference number: 5 (lower is better)
Translates to: GTRLHSAEPQRSGPLGNPQRGRI*GILQTQ
Trigger: CTGTGTTTGCAGAATTCCCAAGATACGCCCCCTCTG...TGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTCTGCTGAATGGAGCCGGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS TCA 90 bp GTCCCCCTTCAAAGCAGCAACATCAGCCCGACTCATGTGGGTGGGTaGGCTGGGCAGCCACGAGGAGCACGAGGACTGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: VPLQSSNISPTHVGG*AGQPRGARGLALQQ
Trigger: TTGTTGCAGTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTGCTTTGAAGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS CCA 90 bp AGAAACCGCAGGCCTCCAGCGTTGGTTGCCACGTTTCCCCCGATGTaGCAGCTGCCCTTGGCTCCTAAGTCCAGCGGCATGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: RNRRPPALVATFPPM*QLPLAPKSSGMMKS
Trigger: GGACTTCATCATGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS GCA 90 bp GCAGACAGGATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCGAGGAAAGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: ADRISPSIPLQVLKV*RTSAKPGQPRKATF
Trigger: GAACGTGGCTTTCCTCGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS GCA 90 bp GCAGACAGGATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCTGGAGTGCGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: ADRISPSIPLQVLKV*RTSAKPGQPGVRRA
Trigger: TGCTCTTCGCACTCCAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432449.1
CDS GCA 90 bp GCAGACAGGATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCAGACACGCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: ADRISPSIPLQVLKV*RTSAKPGQPDTLWK
Trigger: CTTCCACAGCGTGTCTGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437164.1
CDS GCA 90 bp GCAGACAGGATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCTGAAACGGGTCACAGC +
Preference number: 5 (lower is better)
Translates to: ADRISPSIPLQVLKV*RTSAKPGQPETGHS
Trigger: GCTGTGACCCGTTTCAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470343.5
ENST00000473126.1
CDS GCA 90 bp GCAGACAGGATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCTTTCAGGGCGAGACAG +
Preference number: 5 (lower is better)
Translates to: ADRISPSIPLQVLKV*RTSAKPGQPFRARQ
Trigger: CTGTCTCGCCCTGAAAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGATCCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000496252.5
CDS CCA 90 bp TCCCATGCAGTGAGCCATATCGAAGAAACCGCAGGCCTCCAGCGTTaGTTGCCACGTTTCCCCCGATGTGGCAGCTGCCCTTGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SHAVSHIEETAGLQR*LPRFPRCGSCPWLL
Trigger: TAGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCACTGCATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CCA 90 bp GCCCACAGCATCGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: AHSIEESHVHSPGLG*TQDGHRGDDPQSAL
Trigger: GAGGGCACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGATGCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400769.6
CDS CCA 90 bp CCTTCAAAGCAGCAACATCAGCCCGACTCATGTGGGTGGGTGAGCTaGGCAGCCACGAGGAGCACGAGGACTGGCACTGCAACAAACAGC +
Preference number: 5 (lower is better)
Translates to: PSKQQHQPDSCGWVS*AATRSTRTGTATNS
Trigger: GCTGTTTGTTGCAGTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTGCTTTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS-3UTR CAA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCGACCCCCAGTGGGCCTaGGCAGCAGCAGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPDPQWA*AAAGVA
Trigger: GGCCACTCCTGCTGCTGCCAAGGCCCACTGGGGGTC...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp GAGCCGCAGCGCTCAGGTCCTCTCGGCAACCCACGATCACGGCCCACGTGGTCCTGCTTCGAACTTCCATaGTGGAGATCTGTAGACTCA +
Preference number: 5 (lower is better)
Translates to: EPQRSGPLGNPRSRPTWSCFELP*WRSVDS
Trigger: TGAGTCTACAGATCTCCACAATGGAAGTTCGAAGCA...GGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAGCGCTGCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS GCA 90 bp AGATCTTGCACCGGGCTGGCCAGGTGGAGATGGCGCCCGACCAGCTaGATGCACACAGCATCCATGAACTCGAATGCAGACAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: RSCTGLARWRWRPTS*MHTASMNSNADRIS
Trigger: TGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS CCA 90 bp CATCCCCTTGCAGGTGCTGAAGGTCTGCAGAACCTCAGCAAAGCCTaGGCAGCCTTTCAGGGCGAGACAGGGAGGCAATGCAAAGGCATG +
Preference number: 5 (lower is better)
Translates to: HPLAGAEGLQNLSKA*AAFQGETGRQCKGM
Trigger: CATGCCTTTGCATTGCCTCCCTGTCTCGCCCTGAAAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000496252.5
CDS-3UTR CAA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCATGTGGCAGCTGCCCTaGGCTCCTAAGTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: QNPKLRAQLALITVFPAGMWQLP*APKSSG
Trigger: GCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACAT...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp GAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCAGGGCCTCCAGCGTTGGTaGCCACGTTTCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: EPETQSTACPDNCLPSWQGLQRW*PRFPRC
Trigger: ACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCC...CTGCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS TCA 90 bp CAGGAAGTGGCCCAGCTTCTCAGCGTCATGGCCTGCGTTGGAGCCTaGAGTCTCGATGAGGACGTAAAACGGACTCTCAGACACGCTGTG +
Preference number: 5 (lower is better)
Translates to: QEVAQLLSVMACVGA*SLDEDVKRTLRHAV
Trigger: CACAGCGTGTCTGAGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCTGGGCCACTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454048.1
CDS GCA 90 bp CCTAGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTaGTTCGAACTTCCATTGTGGAGATCTTGCACCGGGCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRAQTDRPVVCVAFA*FELPLWRSCTGLAR
Trigger: CCTGGCCAGCCCGGTGCAAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS CCA 90 bp ACACAGAAAACCGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: TQKTEESHVHSPGLG*TQDGHRGDDPQSAL
Trigger: GAGGGCACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGGTTTTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417686.1
CDS-3UTR CAA 90 bp TTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCGGCCTCCAGCGTTGGTaGCCACGTTTCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: LLDIHDRMRCASSCIAQPGLQRW*PRFPRC
Trigger: ACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCC...GGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CAGAACCCGAAACTCAGAGCACAGCTTGCCCTGATAACTGTCTTCCCAGCTGGCGCCTCCGCCGTCACATaGAGGTGCAGGTTACCATCT +
Preference number: 5 (lower is better)
Translates to: QNPKLRAQLALITVFPAGASAVT*RCRLPS
Trigger: AGATGGTAACCTGCACCTCAATGTGACGGCGGAGGC...GCCAGCTGGGAAGACAGTTATCAGGGCAAGCTGTGCTCTGAGTTTCGGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CCACCTGCAGCTTCAGGTCATGACACGGCACAGAGTGGCAAGGGCCAGGGAAGGTTGCGTGGCTTTTGCTaGCTTCGAACTTCCATTGTG +
Preference number: 5 (lower is better)
Translates to: PPAASGHDTAQSGKGQGRLRGFC*LRTSIV
Trigger: CACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAA...CCTTCCCTGGCCCTTGCCACTCTGTGCCGTGTCATGACCTGAAGCTGCAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS CCA 90 bp CCGGGCCAAATCCTAGGGCTCAGACAGATCGGCCTGTGGTTTGCGTaGCTTTTGCTTGCTTCGAACTTCCATTGTGGAGATCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: PGQILGLRQIGLWFA*LLLASNFHCGDLAP
Trigger: CGGTGCAAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGGATTTGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS-3UTR CAA 90 bp CTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCCAGCCCATCTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGAC +
Preference number: 5 (lower is better)
Translates to: LDIHDRMRCASSCIAQPIFTALG*GGHKMD
Trigger: GTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAA...GATGGGCTGGGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp GGCAGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCAGCGTCATGGCCTGCGTaGGAGCCTGAAGTCTCGATG +
Preference number: 5 (lower is better)
Translates to: GSPLEDVGNDTFLSRHKPASWPA*EPEVSM
Trigger: CATCGAGACTTCAGGCTCCAACGCAGGCCATGACGC...TGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCACTCTGCAGTGGCCCTaGTCCGTGCCGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: RFLLDIHDRMRCASSCIATLQWP*SVPGPS
Trigger: CGAGGGCCCCGGCACGGACAAGGGCCACTGCAGAGT...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCGTAAAACGGACTCTCTaGCACCGGGCTGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPVKRTL*HRAGQV
Trigger: CACCTGGCCAGCCCGGTGCAAGAGAGTCCGTTTTAC...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS GCA 90 bp AGAACCGGGCCAAATCCTAGGGCTCAGACAGATCGGCCTGTGGTTTaGGTGGCTTTTGCTTGCTTCGAACTTCCATTGTGGAGATCTTGC +
Preference number: 5 (lower is better)
Translates to: RTGPNPRAQTDRPVV*VAFACFELPLWRSC
Trigger: GCAAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGGATTTGGCCCGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS CCA 90 bp TGGGCAGCCTTTCAGGGCGAGACAGGGAGGCAATGCAAAGGCATGTaGATATCAGAGAAGAATTTTCCAGAGAGAAGGTCTCACAGGCGC +
Preference number: 5 (lower is better)
Translates to: WAAFQGETGRQCKGM*ISEKNFPERRSHRR
Trigger: GCGCCTGTGAGACCTTCTCTCTGGAAAATTCTTCTCTGATATCCACATGCCTTTGCATTGCCTCCCTGTCTCGCCCTGAAAGGCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000496252.5
CDS-3UTR CAA 90 bp AGCCCTCTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGAC +
Preference number: 5 (lower is better)
Translates to: SPLEDVGNDTFLSRHKPQFTALG*GGHKMD
Trigger: GTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAA...CTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp ATGCACACAGCATCCATGAACTCGAATGCAGACAGGATCTCACCCAGCATCCCCAGATCGGCCTGTGGTTaGCGTGGCTTTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: MHTASMNSNADRISPSIPRSACG*RGFCLL
Trigger: AAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCT...GGGGATGCTGGGTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS GCA 90 bp CTCAGCAAAGCCTGGGCAGCCTTTCAGGGCGAGACAGGGAGGCAATaGAAAGGCATGTGGATATCAGAGAAGAATTTTCCAGAGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LSKAWAAFQGETGRQ*KGMWISEKNFPERR
Trigger: CCTTCTCTCTGGAAAATTCTTCTCTGATATCCACATGCCTTTGCATTGCCTCCCTGTCTCGCCCTGAAAGGCTGCCCAGGCTTTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000496252.5
CDS-3UTR CAA 90 bp AGATTTTTACTGGACATTCATGACAGAATGAGATGTGCATCCAGCTGCATCGCCTCACCCAGCATCCCCTaGCAGGTGCTGAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RFLLDIHDRMRCASSCIASPSIP*QVLKVC
Trigger: GCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGA...GGCGATGCAGCTGGATGCACATCTCATTCTGTCATGAATGTCCAGTAAAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000403782.5
ENST00000436747.5
CDS-3UTR CAA 90 bp CTAGAAGATGTGGGAAATGACACATTCCTGTCCAGACACAAGCCACAGTCACCCTGGTTTGCGTGGCTTTaGCTTGCTTCGAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: LEDVGNDTFLSRHKPQSPWFAWL*LASNFH
Trigger: ATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCA...GGGTGACTGTGGCTTGTGTCTGGACAGGAATGTGTCATTTCCCACATCTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436747.5
CDS CAA 90 bp AGCAGCACCTTGCTACAGCCTCGCAGCGTCCGCAACCAGTCCACGTaGGGAGCCTGCAGCGCTTCCGGGTCCGTGACGACCCCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: SSTLLQPRSVRNQST*GACSASGSVTTPPG
Trigger: GCCCGGCGGGGTCGTCACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCGGACGCTGCGAGGCTGTAGCAAGGTGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS CCA 72 bp GGTTACCATCAAGGTGGCCATAGCCCACCACGTGCTTaGCGTGCGGGCCGAGGCGGGCGCGCAGGTCAGTCA +
Preference number: 6 (lower is better)
Translates to: GYHQGGHSPPRA*RAGRGGRAGQS
Trigger: TGACTGACCTGCGCGCCCGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGATGGTAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486953.5
CDS CCA 72 bp AAGGTCTCACAGGCGCAGAGGCTGGGGGCAGACACCTaGAGTGCGAAGAGCAGGATGCGGCAGCCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: KVSQAQRLGADT*SAKSRMRQPGW
Trigger: CCAGCCCGGCTGCCGCATCCTGCTCTTCGCACTCCAGGTGTCTGCCCCCAGCCTCTGCGCCTGTGAGACCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496252.5
CDS CAA 72 bp TTGCTACAGCCTCGCAGCGTCCGCAACCAGTCCACGTaGGGAGCCTGCAGCGCTTCCGGGTCCGTGACGACC +
Preference number: 6 (lower is better)
Translates to: LLQPRSVRNQST*GACSASGSVTT
Trigger: GGTCGTCACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCGGACGCTGCGAGGCTGTAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS CAA 72 bp CCTGTCTCTACTCGCAGCGTCCGCAACCAGTCCACGTaGGGAGCCTGCAGCGCTTCCGGGTCCGTGACGACC +
Preference number: 6 (lower is better)
Translates to: PVSTRSVRNQST*GACSASGSVTT
Trigger: GGTCGTCACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGCGGACGCTGCGAGTAGAGACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463932.1
CDS GCA 72 bp TGTCCTTCCTCAGGGAGGTCAGGCAGTCCAGGACAGTaGCGTCGGCCAGCACCACTTCCAGGCCCAGGACAG +
Preference number: 6 (lower is better)
Translates to: CPSSGRSGSPGQ*RRPAPLPGPGQ
Trigger: CTGTCCTGGGCCTGGAAGTGGTGCTGGCCGACGGCACTGTCCTGGACTGCCTGACCTCCCTGAGGAAGGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CCA 72 bp GTGCCTGAGGATGTGGGACACCTCCTCCGACGTCCGTaGCCTCAGCAGCACCTTGCTACAGCCTCGCAGCGT +
Preference number: 6 (lower is better)
Translates to: VPEDVGHLLRRP*PQQHLATASQR
Trigger: ACGCTGCGAGGCTGTAGCAAGGTGCTGCTGAGGCCACGGACGTCGGAGGAGGTGTCCCACATCCTCAGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000436747.5
CDS GCA 72 bp GAGCTGGGCAGCCACGAGGAGCACGAGGACTGGCACTaGAACAAACAGCCCAGGGTTTGCCTGGCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: ELGSHEEHEDWH*NKQPRVCLAGA
Trigger: TGCACCTGCCAGGCAAACCCTGGGCTGTTTGTTGCAGTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS CCA 72 bp AGGCCTCCAGCGTTGGTTGCCACGTTTCCCCCGATGTaGCAGCTGCCCTTGGCTCCTAAGTCCAGCGGCATG +
Preference number: 6 (lower is better)
Translates to: RPPALVATFPPM*QLPLAPKSSGM
Trigger: CATGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CCA 72 bp GTGCCTGAGGATGTGGGACACCTCCTCCGACGTCCGTaGCCTCAGCAGCACCTTGCTACAGCCCACGATCAC +
Preference number: 6 (lower is better)
Translates to: VPEDVGHLLRRP*PQQHLATAHDH
Trigger: GTGATCGTGGGCTGTAGCAAGGTGCTGCTGAGGCCACGGACGTCGGAGGAGGTGTCCCACATCCTCAGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403782.5
CDS CCA 72 bp CAGCAACATCAGCCCGACTCATGTGGGTGGGTGAGCTaGGCAGCCACGAGGAGCACGAGGACTGGCACTGCA +
Preference number: 6 (lower is better)
Translates to: QQHQPDSCGWVS*AATRSTRTGTA
Trigger: TGCAGTGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS TCA 72 bp CAAAGCAGCAACATCAGCCCGACTCATGTGGGTGGGTaGGCTGGGCAGCCACGAGGAGCACGAGGACTGGCA +
Preference number: 6 (lower is better)
Translates to: QSSNISPTHVGG*AGQPRGARGLA
Trigger: TGCCAGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS GCA 72 bp GCCATATCGAAGAAACCGCAGGCCTCCAGCGTTGGTTaGCACGTTTCCCCCGATGTGGCAGCTGCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: AISKKPQASSVG*HVSPDVAAALG
Trigger: GCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CCA 72 bp TCCCCCTTCAAAGCAGCAACATCAGCCCGACTCATGTaGGTGGGTGAGCTGGGCAGCCACGAGGAGCACGAG +
Preference number: 6 (lower is better)
Translates to: SPFKAATSARLM*VGELGSHEEHE
Trigger: CTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTGCTTTGAAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS CCA 72 bp TTGTGGAGATCTTGCACCGGGCTGGCCAGGTGGAGATaGCGCCCGACCAGCTGCATGCACACAGCATCCATG +
Preference number: 6 (lower is better)
Translates to: LWRSCTGLARWR*RPTSCMHTASM
Trigger: CATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGATCTCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS CCA 72 bp CTTCCATTGTGGAGATCTTGCACCGGGCTGGCCAGGTaGAGATGGCGCCCGACCAGCTGCATGCACACAGCA +
Preference number: 6 (lower is better)
Translates to: LPLWRSCTGLAR*RWRPTSCMHTA
Trigger: TGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCTGGCCAGCCCGGTGCAAGATCTCCACAATGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS CAA 90 bp CCTCCAGCGTTGGTTGCCACGTTTCCCCCGATGTGGCAGCTGCCCTaGGCTCCTAAGTCCAGCGGCATGATGAAGTCCCGTTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: PPALVATFPPMWQLP*APKSSGMMKSRSST
Trigger: TGTGGAGGAACGGGACTTCATCATGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CAA 90 bp GTCCCATGCAGTGAGCCATATCGAAGAAACCGCAGGCCTCCAGCGTaGGTTGCCACGTTTCCCCCGATGTGGCAGCTGCCCTTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: VPCSEPYRRNRRPPA*VATFPPMWQLPLAP
Trigger: AGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCACTGCATGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CCA 72 bp GTGAGCCATATCGAAGAAACCGCAGGCCTCCAGCGTTaGTTGCCACGTTTCCCCCGATGTGGCAGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: VSHIEETAGLQR*LPRFPRCGSCP
Trigger: AGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CCA 72 bp CCTTCAAAGCAGCAACATCAGCCCGACTCATGTGGGTaGGTGAGCTGGGCAGCCACGAGGAGCACGAGGACT +
Preference number: 6 (lower is better)
Translates to: PSKQQHQPDSCG*VSWAATRSTRT
Trigger: AGTCCTCGTGCTCCTCGTGGCTGCCCAGCTCACCCACCCACATGAGTCGGGCTGATGTTGCTGCTTTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470343.5
CDS CCA 72 bp GCAGGTGCTGAAGGTCTGCAGAACCTCAGCAAAGCCTaGGCAGCCTTTCAGGGCGAGACAGGGAGGCAATGC +
Preference number: 6 (lower is better)
Translates to: AGAEGLQNLSKA*AAFQGETGRQC
Trigger: GCATTGCCTCCCTGTCTCGCCCTGAAAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000496252.5
CDS CAA 72 bp AGCCATATCGAAGAAACCGCAGGCCTCCAGCGTTGGTaGCCACGTTTCCCCCGATGTGGCAGCTGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: SHIEETAGLQRW*PRFPRCGSCPW
Trigger: CCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CAA 72 bp AGTGAGCCATATCGAAGAAACCGCAGGCCTCCAGCGTaGGTTGCCACGTTTCCCCCGATGTGGCAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SEPYRRNRRPPA*VATFPPMWQLP
Trigger: GGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CAA 90 bp GCAAAGCCTGGGCAGCCGAGGAAAGCCACGTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTG +
Preference number: 6 (lower is better)
Translates to: AKPGQPRKATFTALG*GGHKMDTVVMIPKV
Trigger: CACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGGCTGCCCAGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS GCA 72 bp ATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCAGACACG +
Preference number: 6 (lower is better)
Translates to: ISPSIPLQVLKV*RTSAKPGQPDT
Trigger: CGTGTCTGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437164.1
CDS CCA 72 bp GCCGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAA +
Preference number: 6 (lower is better)
Translates to: AEESHVHSPGLG*TQDGHRGDDPQ
Trigger: TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS CCA 72 bp AGGACCACAGGCGGGCGGCACACAGGTGACTGCAGTTaGAGTGGGATCAGAGCAGAACACAGAAAACCGAGG +
Preference number: 6 (lower is better)
Translates to: RTTGGRHTGDCS*SGIRAEHRKPR
Trigger: CCTCGGTTTTCTGTGTTCTGCTCTGATCCCACTCCAACTGCAGTCACCTGTGTGCCGCCCGCCTGTGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417686.1
CDS CAA 72 bp TTGGTTGCCACGTTTCCCCCGATGTGGCAGCTGCCCTaGGCTCCTAAGTCCAGCGGCATGATGAAGTCCCGT +
Preference number: 6 (lower is better)
Translates to: LVATFPPMWQLP*APKSSGMMKSR
Trigger: ACGGGACTTCATCATGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CAA 90 bp CATGCAGTGAGCCATATCGAAGAAACCGCAGGCCTCCAGCGTTGGTaGCCACGTTTCCCCCGATGTGGCAGCTGCCCTTGGCTCCTAAGT +
Preference number: 6 (lower is better)
Translates to: HAVSHIEETAGLQRW*PRFPRCGSCPWLLS
Trigger: ACTTAGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCACTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321264.9
ENST00000400769.6
ENST00000403782.5
ENST00000417686.1
ENST00000436747.5
CDS CAA 90 bp TCAGGGCCCACAGCATCGAGGAAAGCCACGTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTG +
Preference number: 6 (lower is better)
Translates to: SGPTASRKATFTALG*GGHKMDTVVMIPKV
Trigger: CACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGATGCTGTGGGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400769.6
CDS GCA 72 bp ATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCGAGGAAA +
Preference number: 6 (lower is better)
Translates to: ISPSIPLQVLKV*RTSAKPGQPRK
Trigger: TTTCCTCGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321264.9
ENST00000403782.5
CDS GCA 72 bp ATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCTGAAACG +
Preference number: 6 (lower is better)
Translates to: ISPSIPLQVLKV*RTSAKPGQPET
Trigger: CGTTTCAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470343.5
ENST00000473126.1
CDS GCA 72 bp ATCTCACCCAGCATCCCCTTGCAGGTGCTGAAGGTCTaGAGAACCTCAGCAAAGCCTGGGCAGCCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: ISPSIPLQVLKV*RTSAKPGQPFR
Trigger: CCTGAAAGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGGGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000496252.5
CDS CCA 72 bp ACCGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAA +
Preference number: 6 (lower is better)
Translates to: TEESHVHSPGLG*TQDGHRGDDPQ
Trigger: TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417686.1
CDS TCA 72 bp CAGCGTCATGGCCTGCGTTGGAGCCTGAAGTCTCGATaGGGACGTAAAACGGACTCTCAGACACGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: QRHGLRWSLKSR*GRKTDSQTRCG
Trigger: TCCACAGCGTGTCTGAGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454048.1
CDS TCA 72 bp GCCCAGCTTCTCAGCGTCATGGCCTGCGTTGGAGCCTaGAGTCTCGATGAGGACGTAAAACGGACTCTCAGA +
Preference number: 6 (lower is better)
Translates to: AQLLSVMACVGA*SLDEDVKRTLR
Trigger: TCTGAGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGACGCTGAGAAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454048.1
CDS CCA 72 bp ATCGAGGAAAGCCACGTTCACAGCCCTGGGCTTGGGTaGACACAAGATGGACACCGTGGTGATGATCCCCAA +
Preference number: 6 (lower is better)
Translates to: IEESHVHSPGLG*TQDGHRGDDPQ
Trigger: TTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400769.6
CDS CAA 90 bp GCAGAACACAGAAAACCGAGGAAAGCCACGTTCACAGCCCTGGGCTaGGGTGGACACAAGATGGACACCGTGGTGATGATCCCCAAAGTG +
Preference number: 6 (lower is better)
Translates to: AEHRKPRKATFTALG*GGHKMDTVVMIPKV
Trigger: CACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAACGTGGCTTTCCTCGGTTTTCTGTGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417686.1
CDS CAA 90 bp CAAATCCTAGGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTaGCTTGCTTCGAACTTCCATTGTGGAGATCTTGCACCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: QILGLRQIGLWFAWL*LASNFHCGDLAPGW
Trigger: CCAGCCCGGTGCAAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCCTAGGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS GCA 72 bp CAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTGCTTaGTTCGAACTTCCATTGTGGAGATCTTGCACCGGG +
Preference number: 6 (lower is better)
Translates to: QTDRPVVCVAFA*FELPLWRSCTG
Trigger: CCCGGTGCAAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS GCA 72 bp GGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTTaGTTGCTTCGAACTTCCATTGTGGAGATCTTGCAC +
Preference number: 6 (lower is better)
Translates to: GSDRSACGLRGF*LLRTSIVEILH
Trigger: GTGCAAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5
CDS CAA 72 bp GGGCTCAGACAGATCGGCCTGTGGTTTGCGTGGCTTTaGCTTGCTTCGAACTTCCATTGTGGAGATCTTGCA +
Preference number: 6 (lower is better)
Translates to: GLRQIGLWFAWL*LASNFHCGDLA
Trigger: TGCAAGATCTCCACAATGGAAGTTCGAAGCAAGCAAAAGCCACGCAAACCACAGGCCGATCTGTCTGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467427.5
ENST00000486953.5