Pregenerated sensors for D21S2088E (Homo sapiens)
Ensembl gene IDs: ENSG00000228592Ensembl transcript IDs: ENST00000262354.5, ENST00000653972.1, ENST00000654898.1, ENST00000655729.1, ENST00000656174.1, ENST00000661065.1, ENST00000664912.1, ENST00000665559.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGCATGATCACAAGGTGAAGTCCCACTACAGGCTGTCTGCAAGTTaGAGAGCAAGGAAGCCAGTAGCGGCTCAGTCCAAGTCCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QHDHKVKSHYRLSAS*RARKPVAAQSKSQN Trigger: GTTTTGGGACTTGGACTGAGCCGCTACTGGCTTCCTTGCTCTTCAACTTGCAGACAGCCTGTAGTGGGACTTCACCTTGTGATCATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262354.5 ENST00000654898.1 ENST00000655729.1 |
||
| CDS TCA 90 bp | GTCCTTCTTCACATGGTGGCAGGAGAGAGAAGAATGAGTACCCAGTaGAGCAGGAAGCCCCTTATAAAGCCATCAGGTCTCATGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: VLLHMVAGERRMSTQ*SRKPLIKPSGLMRT Trigger: AGTTCTCATGAGACCTGATGGCTTTATAAGGGGCTTCCTGCTTCACTGGGTACTCATTCTTCTCTCTCCTGCCACCATGTGAAGAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS TCA 90 bp | CTCACGTTTCATGGAACAGACAGATTATCTTCTTTGCGCTCTTCCTaGAGTCAACGGTTGAACAGCGGATTTGGAGCTCTCAAGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTFHGTDRLSSLRSS*SQRLNSGFGALKLP Trigger: GGGCAACTTGAGAGCTCCAAATCCGCTGTTCAACCGTTGACTTCAGGAAGAGCGCAAAGAAGATAATCTGTCTGTTCCATGAAACGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656174.1 |
||
| CDS TCA 90 bp | GAACAGACAGATTATCTTCTTTGCGCTCTTCCTGAAGTCAACGGTTaGACAGCGGATTTGGAGCTCTCAAGTTGCCCTTTTGTCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EQTDYLLCALPEVNG*TADLELSSCPFVPL Trigger: AAGAGGGACAAAAGGGCAACTTGAGAGCTCCAAATCCGCTGTTCAACCGTTGACTTCAGGAAGAGCGCAAAGAAGATAATCTGTCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656174.1 |
||
| CDS CCA 90 bp | TCCACATGGTTAGGGAAGCCACAGGAAACTTACAATTATGGTGGATaGGGAAACAAACATGTCCTTCTTCACATGGTGGCAGGAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: STWLGKPQETYNYGG*GNKHVLLHMVAGER Trigger: TCTCTCTCCTGCCACCATGTGAAGAAGGACATGTTTGTTTCCCCATCCACCATAATTGTAAGTTTCCTGTGGCTTCCCTAACCATGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS CCA 90 bp | CACTTCCACATGGTTAGGGAAGCCACAGGAAACTTACAATTATGGTaGATGGGGAAACAAACATGTCCTTCTTCACATGGTGGCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HFHMVREATGNLQLW*MGKQTCPSSHGGRR Trigger: TCTCCTGCCACCATGTGAAGAAGGACATGTTTGTTTCCCCATCCACCATAATTGTAAGTTTCCTGTGGCTTCCCTAACCATGTGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS CCA 90 bp | CAATCAATACCAATCTGCCAATGTGTGGGTGAACGGTTTTGTAAATaGTCCTCTGCTGCCCAGCTCACGTTTCATGGAACAGACAGATTA | + |
|
Preference number: 5 (lower is better) Translates to: QSIPICQCVGERFCK*SSAAQLTFHGTDRL Trigger: TAATCTGTCTGTTCCATGAAACGTGAGCTGGGCAGCAGAGGACCATTTACAAAACCGTTCACCCACACATTGGCAGATTGGTATTGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653972.1 ENST00000656174.1 ENST00000665559.1 |
||
| CDS GCA 90 bp | CTTCTTGCAGTTGTTACCAAAATACCAGGAGTTCAGTCTAGGTCCTaGTGTTCACTGCACAGAAAACCAATGACTGAGAGGATGAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LLAVVTKIPGVQSRS*CSLHRKPMTERMSI Trigger: AATGCTCATCCTCTCAGTCATTGGTTTTCTGTGCAGTGAACAGCAGGACCTAGACTGAACTCCTGGTATTTTGGTAACAACTGCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS TCA 90 bp | GCTTATAGTCTCAACCAAGCTAAAATAAAAATGTCAGCCGAGCTATaGTCTCATCAGAGAGTCTCAGCATTCAGTTCTAAGCTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AYSLNQAKIKMSAEL*SHQRVSAFSSKLTV Trigger: CACAGTGAGCTTAGAACTGAATGCTGAGACTCTCTGATGAGATCATAGCTCGGCTGACATTTTTATTTTAGCTTGGTTGAGACTATAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS TCA 90 bp | TTCCTTTTTAAGGTAAATCAAACAGCTACTGAGGCACTATTTACCTaGAATGGAGCAGCCTTTGCATGCAGTCTCAACTTCAAAGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FLFKVNQTATEALFT*NGAAFACSLNFKVN Trigger: GTTAACTTTGAAGTTGAGACTGCATGCAAAGGCTGCTCCATTTCAGGTAAATAGTGCCTCAGTAGCTGTTTGATTTACCTTAAAAAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS TCA 90 bp | CCTGCCTGTGTCCATACACTTAACAGTTATAAAATGTATCCTCACTaGAAACCTTCACTTAGCACTGCATTTATCAAACCCTATGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: PACVHTLNSYKMYPH*KPSLSTAFIKPYVL Trigger: AAGTACATAGGGTTTGATAAATGCAGTGCTAAGTGAAGGTTTTCAGTGAGGATACATTTTATAACTGTTAAGTGTATGGACACAGGCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654898.1 |
||
| CDS TCA 90 bp | TTTATTAGTTTTCAAAGTAGATGTCTCCTAGTCACTACCTACCTGTaGACCCGTCTCTACAGTAGTAGAAGTATGAATGGTACATCTATT | + |
|
Preference number: 5 (lower is better) Translates to: FISFQSRCLLVTTYL*TRLYSSRSMNGTSI Trigger: AATAGATGTACCATTCATACTTCTACTACTGTAGAGACGGGTTCACAGGTAGGTAGTGACTAGGAGACATCTACTTTGAAAACTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654898.1 |
||
| CDS CCA 90 bp | CAGAAGTTACAGTCTAAATTAATACACGGAGTTTATACATTGGTTTaGCCTAAGAAAAGGTGTGACATATTGAAGCAGAAGCTTACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QKLQSKLIHGVYTLV*PKKRCDILKQKLTG Trigger: ACCTGTAAGCTTCTGCTTCAATATGTCACACCTTTTCTTAGGCCAAACCAATGTATAAACTCCGTGTATTAATTTAGACTGTAACTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS TCA 72 bp | CACAAGGTGAAGTCCCACTACAGGCTGTCTGCAAGTTaGAGAGCAAGGAAGCCAGTAGCGGCTCAGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HKVKSHYRLSAS*RARKPVAAQSK Trigger: CTTGGACTGAGCCGCTACTGGCTTCCTTGCTCTTCAACTTGCAGACAGCCTGTAGTGGGACTTCACCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262354.5 ENST00000654898.1 ENST00000655729.1 |
||
| CDS TCA 72 bp | GTCAGCAGAAAAAGGGTTAGCTCTGGCTTGTGGATGTaGCTTCCTCCAGGCCCCTCAGGAAGAACAGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSRKRVSSGLWM*LPPGPSGRTVE Trigger: TTCTACTGTTCTTCCTGAGGGGCCTGGAGGAAGTCACATCCACAAGCCAGAGCTAACCCTTTTTCTGCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS CCA 72 bp | GCGCTCTTCCTGAAGTCAACGGTTGAACAGCGGATTTaGAGCTCTCAAGTTGCCCTTTTGTCCCTCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ALFLKSTVEQRI*SSQVALLSLFQ Trigger: TTGGAAGAGGGACAAAAGGGCAACTTGAGAGCTCCAAATCCGCTGTTCAACCGTTGACTTCAGGAAGAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656174.1 |
||
| CDS CCA 72 bp | ATCAGGCAGCTCATGTTTAAGACCCAGACTCCCGGCTaGCTTACAAGAAAGGGTTTTCAAAGCCGGGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: IRQLMFKTQTPG*LTRKGFQSRGK Trigger: TTTCCCCCGGCTTTGAAAACCCTTTCTTGTAAGCCAGCCGGGAGTCTGGGTCTTAAACATGAGCTGCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS CCA 72 bp | CCAATCTGCCAATGTGTGGGTGAACGGTTTTGTAAATaGTCCTCTGCTGCCCAGCTCACGTTTCATGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: PICQCVGERFCK*SSAAQLTFHGT Trigger: TGTTCCATGAAACGTGAGCTGGGCAGCAGAGGACCATTTACAAAACCGTTCACCCACACATTGGCAGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653972.1 ENST00000656174.1 ENST00000665559.1 |
||
| CDS TCA 72 bp | CATGGAACAGACAGATTATCTTCTTTGCGCTCTTCCTaGAGTCAACGGTTGAACAGCGGATTTGGAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HGTDRLSSLRSS*SQRLNSGFGAL Trigger: GAGAGCTCCAAATCCGCTGTTCAACCGTTGACTTCAGGAAGAGCGCAAAGAAGATAATCTGTCTGTTCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656174.1 |
||
| CDS GCA 72 bp | GAGCCCCTTGCAAACCGCTGGTGTAAGTTCAAAGAGTaGAAAGGACAAAGAACCTGGGGTCTGATGTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: EPLANRWCKFKE*KGQRTWGLMFK Trigger: TTTAAACATCAGACCCCAGGTTCTTTGTCCTTTGCACTCTTTGAACTTACACCAGCGGTTTGCAAGGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS TCA 72 bp | GATTATCTTCTTTGCGCTCTTCCTGAAGTCAACGGTTaGACAGCGGATTTGGAGCTCTCAAGTTGCCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DYLLCALPEVNG*TADLELSSCPF Trigger: AAAAGGGCAACTTGAGAGCTCCAAATCCGCTGTTCAACCGTTGACTTCAGGAAGAGCGCAAAGAAGATAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656174.1 |
||
| CDS TCA 72 bp | AAAGAAGGCTTTAATCAGGTGATGCAGCTGAGGAGATaGGAGATCAGTCTCGAACCCATCTTCCTGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: KEGFNQVMQLRR*EISLEPIFLTE Trigger: TTCAGTCAGGAAGATGGGTTCGAGACTGATCTCTCATCTCCTCAGCTGCATCACCTGATTAAAGCCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS GCA 72 bp | GTTGTTACCAAAATACCAGGAGTTCAGTCTAGGTCCTaGTGTTCACTGCACAGAAAACCAATGACTGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VVTKIPGVQSRS*CSLHRKPMTER Trigger: CCTCTCAGTCATTGGTTTTCTGTGCAGTGAACAGCAGGACCTAGACTGAACTCCTGGTATTTTGGTAACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS CCA 72 bp | TGGTGTAAGTTCAAAGAGTGCAAAGGACAAAGAACCTaGGGTCTGATGTTTAAAGGCAGGAAGCATCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WCKFKECKGQRT*GLMFKGRKHPA Trigger: TGCTGGATGCTTCCTGCCTTTAAACATCAGACCCCAGGTTCTTTGTCCTTTGCACTCTTTGAACTTACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS CCA 72 bp | TTAGGGAAGCCACAGGAAACTTACAATTATGGTGGATaGGGAAACAAACATGTCCTTCTTCACATGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGKPQETYNYGG*GNKHVLLHMVA Trigger: TGCCACCATGTGAAGAAGGACATGTTTGTTTCCCCATCCACCATAATTGTAAGTTTCCTGTGGCTTCCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS CAA 72 bp | AGTCAACGGTTGAACAGCGGATTTGGAGCTCTCAAGTaGCCCTTTTGTCCCTCTTCCAAGTGTAATTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SQRLNSGFGALK*PFCPSSKCNSF Trigger: AAATGAATTACACTTGGAAGAGGGACAAAAGGGCAACTTGAGAGCTCCAAATCCGCTGTTCAACCGTTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656174.1 |
||
| CDS TCA 72 bp | GCCCATGTGATGCATGCAGAAATCCAACAACACATTTaGGTGTTTGAACTTCCAGATTTGCTCTTCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AHVMHAEIQQHI*VFELPDLLFCH Trigger: ATGGCAGAAGAGCAAATCTGGAAGTTCAAACACTCAAATGTGTTGTTGGATTTCTGCATGCATCACATGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000262354.5 ENST00000653972.1 ENST00000654898.1 ENST00000655729.1 ENST00000656174.1 ENST00000661065.1 ENST00000664912.1 ENST00000665559.1 |
||
| CDS TCA 72 bp | AAGGTAAATCAAACAGCTACTGAGGCACTATTTACCTaGAATGGAGCAGCCTTTGCATGCAGTCTCAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: KVNQTATEALFT*NGAAFACSLNF Trigger: GAAGTTGAGACTGCATGCAAAGGCTGCTCCATTTCAGGTAAATAGTGCCTCAGTAGCTGTTTGATTTACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS CCA 72 bp | ATGGTTAGGGAAGCCACAGGAAACTTACAATTATGGTaGATGGGGAAACAAACATGTCCTTCTTCACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: MVREATGNLQLW*MGKQTCPSSHG Trigger: ACCATGTGAAGAAGGACATGTTTGTTTCCCCATCCACCATAATTGTAAGTTTCCTGTGGCTTCCCTAACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS TCA 72 bp | TTTCAAAGTAGATGTCTCCTAGTCACTACCTACCTGTaGACCCGTCTCTACAGTAGTAGAAGTATGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: FQSRCLLVTTYL*TRLYSSRSMNG Trigger: ACCATTCATACTTCTACTACTGTAGAGACGGGTTCACAGGTAGGTAGTGACTAGGAGACATCTACTTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654898.1 |
||
| CDS CCA 72 bp | TATAAGTTTGTCATCGTTAAGGAAACCAACAACAGATaGCACAACACCCAGAGACTAGTACCCGTGTTAATC | + |
|
Preference number: 6 (lower is better) Translates to: YKFVIVKETNNR*HNTQRLVPVLI Trigger: GATTAACACGGGTACTAGTCTCTGGGTGTTGTGCCATCTGTTGTTGGTTTCCTTAACGATGACAAACTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654898.1 |
||
| CDS GCA 72 bp | TGTTTAAATAGGCTAAGTTTTAAGGAGGCTTACTACTaGAGTACTGCTTTTGTAAGAGAGTGCCAAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLNRLSFKEAYY*STAFVRECQAA Trigger: AGCTGCTTGGCACTCTCTTACAAAAGCAGTACTGCAGTAGTAAGCCTCCTTAAAACTTAGCCTATTTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653972.1 |
||
| CDS CAA 72 bp | CTACTGAGGCACTATTTACCTGAAATGGAGCAGCCTTaGCATGCAGTCTCAACTTCAAAGTTAACAAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRHYLPEMEQP*HAVSTSKLTKK Trigger: TTTCTTTGTTAACTTTGAAGTTGAGACTGCATGCAAAGGCTGCTCCATTTCAGGTAAATAGTGCCTCAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262354.5 |
||
| CDS CAA 72 bp | GGGTTTAATAGTGTTTTGGTATCCACACTTCTATCATaGAGACACTATTCACCTTCTCTTACACCTCACCTA | + |
|
Preference number: 6 (lower is better) Translates to: GFNSVLVSTLLS*RHYSPSLTPHL Trigger: TAGGTGAGGTGTAAGAGAAGGTGAATAGTGTCTCAATGATAGAAGTGTGGATACCAAAACACTATTAAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS CAA 90 bp | GGAGTGCAGAAGTTACAGTCTAAATTAATACACGGAGTTTATACATaGGTTTGGCCTAAGAAAAGGTGTGACATATTGAAGCAGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GVQKLQSKLIHGVYT*VWPKKRCDILKQKL Trigger: AAGCTTCTGCTTCAATATGTCACACCTTTTCTTAGGCCAAACCAATGTATAAACTCCGTGTATTAATTTAGACTGTAACTTCTGCACTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS TCA 72 bp | CCTACCTGTGAACCCGTCTCTACAGTAGTAGAAGTATaGATGGTACATCTATTCAAACAAGAGAAATTACAT | + |
|
Preference number: 6 (lower is better) Translates to: PTCEPVSTVVEV*MVHLFKQEKLH Trigger: ATGTAATTTCTCTTGTTTGAATAGATGTACCATTCATACTTCTACTACTGTAGAGACGGGTTCACAGGTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654898.1 |
||
| CDS CAA 72 bp | CATAGTATATGCTTTAAAGATGGACTACTAGGCAATTaGACTCCTGCCTGTGTCCATACACTTAACAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HSICFKDGLLGN*TPACVHTLNSY Trigger: ATAACTGTTAAGTGTATGGACACAGGCAGGAGTCAAATTGCCTAGTAGTCCATCTTTAAAGCATATACTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654898.1 |
||
| CDS CAA 72 bp | AAGATCACTCAGAAAACAAAGTGTCACTCACAGGCTTaGATTCCCAATTATATACAGATAATTGGAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KITQKTKCHSQA*IPNYIQIIGAQ Trigger: CTGAGCTCCAATTATCTGTATATAATTGGGAATCAAAGCCTGTGAGTGACACTTTGTTTTCTGAGTGATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655729.1 |
||
| CDS TCA 72 bp | AAAACAACTATTGGTAAAAGCCTAAGTCAACAGGATTaGTACACAGGTTGTTTACATAAGCTATGTCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: KTTIGKSLSQQD*YTGCLHKLCLL Trigger: CAGTAGACATAGCTTATGTAAACAACCTGTGTATCAATCCTGTTGACTTAGGCTTTTACCAATAGTTGTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654898.1 |
||