RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYTH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000008256

Ensembl transcript IDs: ENST00000350796.8, ENST00000396741.3, ENST00000466543.1, ENST00000478541.1, ENST00000481329.1, ENST00000482460.1, ENST00000488964.5, ENST00000491641.5, ENST00000495176.5

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCTGGCTGTGGCCAGTCTTGGGTGCCGGGCCAGCCTGAGGGGTaGGCACCGCCGGAGCCGGCCGTCAGTGTGTGGTCTGGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: RAGCGQSWVPGQPEG*APPEPAVSVWSGWG
Trigger: CCCCCACCCAGACCACACACTGACGGCCGGCTCCGGCGGTGCCCACCCCTCAGGCTGGCCCGGCACCCAAGACTGGCCACAGCCAGCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp CTTGTCCGAGCACAACATGCTGACAGAGCTGGCTGTGGCCAGTCTTaGGTGCCGGGCCAGCCTGAGGGGTGGGCACCGCCGGAGCCGGCC +
Preference number: 1 (lower is better)
Translates to: LVRAQHADRAGCGQS*VPGQPEGWAPPEPA
Trigger: GGCCGGCTCCGGCGGTGCCCACCCCTCAGGCTGGCCCGGCACCCAAGACTGGCCACAGCCAGCTCTGTCAGCATGTTGTGCTCGGACAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp ACCGGCCCGGGTCGGCCCAAGCACACAATGCCCCCGGTCCAGCCCTaGGCCCTCTCTGTAGGTGGGGCCCAGATCCAGCCTTCCTTGAGC +
Preference number: 1 (lower is better)
Translates to: TGPGRPKHTMPPVQP*ALSVGGAQIQPSLS
Trigger: GCTCAAGGAAGGCTGGATCTGGGCCCCACCTACAGAGAGGGCTCAGGGCTGGACCGGGGGCATTGTGTGCTTGGGCCGACCCGGGCCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp CAAGCACACAATGCCCCCGGTCCAGCCCTGAGCCCTCTCTGTAGGTaGGGCCCAGATCCAGCCTTCCTTGAGCGGAGCACTGGGCACCTC +
Preference number: 1 (lower is better)
Translates to: QAHNAPGPALSPLCR*GPDPAFLERSTGHL
Trigger: GAGGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCTGGGCCCCACCTACAGAGAGGGCTCAGGGCTGGACCGGGGGCATTGTGTGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp CAGCGGAAGCTGCTGTCCTGGCTTCTCCCCCTAGGGGCGCCGGGATaGTCGCAGGAAGGAAATGCTTCTGGACATGCGCAGCCGACCATG +
Preference number: 1 (lower is better)
Translates to: QRKLLSWLLPLGAPG*SQEGNASGHAQPTM
Trigger: CATGGTCGGCTGCGCATGTCCAGAAGCATTTCCTTCCTGCGACCATCCCGGCGCCCCTAGGGGGAGAAGCCAGGACAGCAGCTTCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp GTACGAATGAGGCTCCCGTCTGTGGAATCCGTCCCGTGTCTGCTGTaGAGACAGCGGAAGCTGCTGTCCTGGCTTCTCCCCCTAGGGGCG +
Preference number: 1 (lower is better)
Translates to: VRMRLPSVESVPCLL*RQRKLLSWLLPLGA
Trigger: CGCCCCTAGGGGGAGAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGGGAGCCTCATTCGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp TGCAGGACAGGGGTTTCTGGCCTCGGACCCCTCTGCAGTCTAGTGTaGCTTAAAGCTACATCAAGGTCAGCCGCAGGGAGGCGAAGGGCC +
Preference number: 1 (lower is better)
Translates to: CRTGVSGLGPLCSLV*LKATSRSAAGRRRA
Trigger: GGCCCTTCGCCTCCCTGCGGCTGACCTTGATGTAGCTTTAAGTCACACTAGACTGCAGAGGGGTCCGAGGCCAGAAACCCCTGTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 90 bp AACAGATGTGTCCTGTTTCAGGGCCGTCCTGGTAGCGGCTGGCCCTaGGCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAA +
Preference number: 1 (lower is better)
Translates to: NRCVLFQGRPGSGWP*AVTDPEFSGPGLPQ
Trigger: TTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGCGCAGGGCCAGCCGCTACCAGGACGGCCCTGAAACAGGACACATCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp GCATGGCTCCCAGGTGCCCACCACCTGGCGAAGCTCATTCACAGATaGCAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: AWLPGAHHLAKLIHR*QQRGSLIIWRLLPA
Trigger: AGCAGGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGCTTCGCCAGGTGGTGGGCACCTGGGAGCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTaGAGATTCAAGGTGTGTGTGCCTATGCAGGTGGGGCAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: LDWAFCTGVQMPSRG*RFKVCVPMQVGQEE
Trigger: CTCTTCCTGCCCCACCTGCATAGGCACACACACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp TGCCCTCCAGAGGGTGCAGATTCAAGGTGTGTGTGCCTATGCAGGTaGGGCAGGAAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAAC +
Preference number: 1 (lower is better)
Translates to: CPPEGADSRCVCLCR*GRKRKSIEEKPATN
Trigger: GTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTTCCTGCCCCACCTGCATAGGCACACACACCTTGAATCTGCACCCTCTGGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp ACCACCTGGCGAAGCTCATTCACAGATGACAGCAAAGGGGGAGCTTaGTCATCTGGCGACTCCTTCCTGCTGCTTCTCCCAACACCCAAA +
Preference number: 1 (lower is better)
Translates to: TTWRSSFTDDSKGGA*SSGDSFLLLLPTPK
Trigger: TTTGGGTGTTGGGAGAAGCAGCAGGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGCTTCGCCAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 90 bp CAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGTGTGTaGCTATGCAGGTGGGGCAGGAAGAGGAAGTCCATAGAGGAAAAG +
Preference number: 1 (lower is better)
Translates to: QEYRCPPEGADSRCV*LCRWGRKRKSIEEK
Trigger: CTTTTCCTCTATGGACTTCCTCTTCCTGCCCCACCTGCATAGGCACACACACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp CAGTGGCTTTCTAGAACGGTTAATACTGCCCCGAGTGAATGCGTTTaGCATGGTACGAATGAGGCTCCCGTCTGTGGAATCCGTCCCGTG +
Preference number: 1 (lower is better)
Translates to: QWLSRTVNTAPSECV*HGTNEAPVCGIRPV
Trigger: CACGGGACGGATTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAGTATTAACCGTTCTAGAAAGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp ACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATaGTGGTCGCACAGCCTTCATGCTAATACTGTCCTAACACAGCCT +
Preference number: 1 (lower is better)
Translates to: TQSFLDQACLKDQQA*WSHSLHANTVLTQP
Trigger: AGGCTGTGTTAGGACAGTATTAGCATGAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 90 bp CTGAGGTTTTGTCTCTGGACTGGGCATTTTGCACAGGAGTACAGATaGCCTCCAGAGGGTGCAGATTCAAGGTGTGTGTGCCTATGCAGG +
Preference number: 1 (lower is better)
Translates to: LRFCLWTGHFAQEYR*PPEGADSRCVCLCR
Trigger: CCTGCATAGGCACACACACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAACCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp GCTCGGCCTCCACTTCAAGGCAACTCAAAGAACAGTCTCCGCTGCTaGGAAGGAAACCTAGGTGCACAAAGTCTGAGGTTTTGTCTCTGG +
Preference number: 1 (lower is better)
Translates to: ARPPLQGNSKNSLRC*EGNLGAQSLRFCLW
Trigger: CCAGAGACAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCTCAGCAGCGGAGACTGTTCTTTGAGTTGCCTTGAAGTGGAGGCCGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp AGAAGGAAACCTAGGTGCACAAAGTCTGAGGTTTTGTCTCTGGACTaGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGA +
Preference number: 1 (lower is better)
Translates to: RRKPRCTKSEVLSLD*AFCTGVQMPSRGCR
Trigger: TCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp AACACCCAAAACAGAAAGCTCTGCATCCCCAGGTCACACCTGGGTTaGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACA +
Preference number: 1 (lower is better)
Translates to: NTQNRKLCIPRSHLG*SEEGNSLSEHNMLT
Trigger: TGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCCAGGTGTGACCTGGGGATGCAGAGCTTTCTGTTTTGGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp TTTGAGGTATCAGTAACAAAGCCTAAGAACGTGGGAATGAAAGTCTaGTGCAGGACAGGGGTTTCTGGCCTCGGACCCCTCTGCAGTCTA +
Preference number: 1 (lower is better)
Translates to: FEVSVTKPKNVGMKV*CRTGVSGLGPLCSL
Trigger: TAGACTGCAGAGGGGTCCGAGGCCAGAAACCCCTGTCCTGCATCAGACTTTCATTCCCACGTTCTTAGGCTTTGTTACTGATACCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 90 bp CGCTGCCATGTGTGTGCATCTAAACAAAACATCAGCAGTTTCACGTaGCTCAGCGTATGGACCATCTGTGTCCAGGGAAAAGGCTGTTTC +
Preference number: 1 (lower is better)
Translates to: RCHVCASKQNISSFT*LSVWTICVQGKGCF
Trigger: GAAACAGCCTTTTCCCTGGACACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGCACACACATGGCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 90 bp ATAAAACAGTGGCTTTCTAGAACGGTTAATACTGCCCCGAGTGAATaGGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAATCCGT +
Preference number: 1 (lower is better)
Translates to: IKQWLSRTVNTAPSE*VWHGTNEAPVCGIR
Trigger: ACGGATTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAGTATTAACCGTTCTAGAAAGCCACTGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 90 bp AGGCAACTCAAAGAACAGTCTCCGCTGCTGAGAAGGAAACCTAGGTaGACAAAGTCTGAGGTTTTGTCTCTGGACTGGGCATTTTGCACA +
Preference number: 1 (lower is better)
Translates to: RQLKEQSPLLRRKPR*TKSEVLSLDWAFCT
Trigger: TGTGCAAAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCTCAGCAGCGGAGACTGTTCTTTGAGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 90 bp GGAGGCCAGAGTTGCATATCTACCAGTCAGGCATTTCAAGAACGCTaGCTTGCCTTTCTCAGAACTAAAACTTCCGATTTGAGGTATCAG +
Preference number: 1 (lower is better)
Translates to: GGQSCISTSQAFQER*LAFLRTKTSDLRYQ
Trigger: CTGATACCTCAAATCGGAAGTTTTAGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAAATGCCTGACTGGTAGATATGCAACTCTGGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 90 bp AATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCTaGCATGTGTGTGCATCTAAACAAAACATCAGCAGTTTCACGTGG +
Preference number: 1 (lower is better)
Translates to: NMVKSRSNLLTCMKR*HVCASKQNISSFTW
Trigger: CCACGTGAAACTGCTGATGTTTTGTTTAGATGCACACACATGGCAGCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAATGCGCAGCCGACCATaGCCCCAGCCACGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPMRSRP*PQPRQE
Trigger: CTCCTGCCGTGGCTGGGGTCATGGTCGGCTGCGCAT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCACACGGCACGAGGCCTTaGGGATACCACCTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPHGTRP*GYHLGH
Trigger: GTGGCCCAGGTGGTATCCCCAAGGCCTCGTGCCGTG...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCGGGCGACTGCCTCCCTaGCACGCCTTCCGCGGAGGG +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRGRLPP*HAFRGG
Trigger: CCCTCCGCGGAAGGCGTGGCAGGGAGGCAGTCGCCC...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAGTCCCGTGTCTGCTGTaGAGACAGCGGAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPVPCLL*RQRKLL
Trigger: CAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGAC...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCGGGCGACTGCCTCCCTaGCACGCCTTCCGCGGAGGG +
Preference number: 2 (lower is better)
Translates to: FWTRPASRISRHDGRTAFGRLPP*HAFRGG
Trigger: CCCTCCGCGGAAGGCGTGGCAGGGAGGCAGTCGCCC...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTGCACCGCAGGGCGACTaGCTCCCTGCCACGCCTTCC +
Preference number: 2 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSAPQGD*LPATPS
Trigger: GGAAGGCGTGGCAGGGAGGCAGTCGCCCTGCGGTGC...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCCCCCCGGTCCAGCCCTaGGCCCTCTCTGTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: FWTRPASRISRHDGRTAFPPVQP*ALSVGG
Trigger: CCCACCTACAGAGAGGGCTCAGGGCTGGACCGGGGG...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAAAATGCTTCTGGACATaGGCAGCCGACCATGACCCC +
Preference number: 2 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPKCFWT*AADHDP
Trigger: GGGGTCATGGTCGGCTGCGCATGTCCAGAAGCATTT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCGTCCCGTGTCTGCTGTaGAGACAGCGGAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTVPCLL*RQRKLL
Trigger: CAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGAC...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCGCCAAAAAGCCTGGTTaGAGGGAGGCCTCATGGGAG +
Preference number: 2 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTAKKPG*REASWE
Trigger: CTCCCATGAGGCCTCCCTTCAACCAGGCTTTTTGGC...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCCCACCGGCGTCTATCTaGGTTCTCTACGTGCCGGGC +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRPPASI*VLYVPG
Trigger: GCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGG...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCACATCCACAGCAACCTaGCAACCTCCCAGGCGGGCG +
Preference number: 2 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGTSTAT*QPPRRA
Trigger: CGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGT...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCAAATGCTTCTGGACATaGGCAGCCGACCATGACCCC +
Preference number: 2 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTKCFWT*AADHDP
Trigger: GGGGTCATGGTCGGCTGCGCATGTCCAGAAGCATTT...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTCTGGGTTCTCTACGTaGCGGGCCTCTGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVESGFST*RASAPQ
Trigger: CTGGGGTGCAGAGGCCCGGCACGTAGAGAACCCAGA...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCCTCGAGGATCAGTCTaGGCCACGGTACGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFPRGSV*ATVRSG
Trigger: TCCAGAGCGTACCGTGGCCCAGACTGATCCTCGAGG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCCCTCGAGGATCAGTCTaGGCCACGGTACGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRPRGSV*ATVRSG
Trigger: TCCAGAGCGTACCGTGGCCCAGACTGATCCTCGAGG...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTGCCAAAAAGCCTGGTTaGAGGGAGGCCTCATGGGAG +
Preference number: 2 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSAKKPG*REASWE
Trigger: CTCCCATGAGGCCTCCCTTCAACCAGGCTTTTTGGC...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGGGCGGGCGTGGAGTTTaGCCAGTTCCACCACCGGCG +
Preference number: 2 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVGGRGV*PVPPPA
Trigger: CGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCC...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTCTTGGGGATACCACCTaGGCCACGGTATGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSLGDTT*ATVCSG
Trigger: TCCAGAGCATACCGTGGCCCAGGTGGTATCCCCAAG...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGCTAGGGGCGCCGGGATaGTCGCAGGAAGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVELGAPG*SQEGNA
Trigger: AGCATTTCCTTCCTGCGACCATCCCGGCGCCCCTAG...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCCCGGCCGTCAGTGTGTaGTCTGGGTGGGGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: AHSQMTAKGELDHLATPSPAVSV*SGWGSR
Trigger: CCTGGACCCCCACCCAGACCACACACTGACGGCCGG...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCCCCGCGGTGTCTTTCTaGTGGGGTTGGGTCTTTTAC +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRPAVSF*WGWVFY
Trigger: GTAAAAGACCCAACCCCAGCAGAAAGACACCGCGGG...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTGTGGCCAGTCTTGGGTaGCGGGCCAGCCTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAVASLG*RASLRG
Trigger: ACCCCTCAGGCTGGCCCGGCACCCAAGACTGGCCAC...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCACGTGGCTCAGCGTATaGACCATCTGTGTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRTWLSV*TICVQG
Trigger: TCCCTGGACACAGATGGTCCATACGCTGAGCCACGT...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCATCAGCAGTTTCACGTaGCTCAGCGTATGGACCATC +
Preference number: 2 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTISSFT*LSVWTI
Trigger: GATGGTCCATACGCTGAGCCACGTGAAACTGCTGAT...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCCCTCCCAGGCGGGCGTaGAGTTTGACCAGTTCCACC +
Preference number: 2 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFPPRRA*SLTSST
Trigger: GGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGG...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCGTGTGCCTATGCAGGTaGGGCAGGAAGAGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGVCLCR*GRKRKS
Trigger: GGACTTCCTCTTCCTGCCCCACCTGCATAGGCACAC...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCCGGCCGTCAGTGTGTaGTCTGGGTGGGGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAPAVSV*SGWGSR
Trigger: CCTGGACCCCCACCCAGACCACACACTGACGGCCGG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCTTGGCATGGTACGAATaGGGCTCCCGTCTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRLAWYE*GSRLWN
Trigger: ATTCCACAGACGGGAGCCTCATTCGTACCATGCCAA...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCCTGACAGGGCAGGGCTaGACGCTGCCCCCGTGCCGG +
Preference number: 2 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRLTGQG*TLPPCR
Trigger: CCGGCACGGGGGCAGCGTGCAGCCCTGCCCTGTCAG...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCCAGGTGCCCACCACCTaGCGAAGCTCATTCACAGAT +
Preference number: 2 (lower is better)
Translates to: FWTRPASRISRHDGRTAFQVPTT*RSSFTD
Trigger: ATCTGTGAATGAGCTTCGCCAGGTGGTGGGCACCTG...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp CTGCCCCGAGTGAATGCGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAAGTCGCAGGAAGGAAATaGTTCTGGACATGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: LPRVNAFGMVRMRLPSVEVAGRK*FWTCAA
Trigger: GGCTGCGCATGTCCAGAAGCATTTCCTTCCTGCGAC...TTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTAATCCGTCCCGTGTCTaGTGTGGAGACAGCGGAAGC +
Preference number: 2 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFNPSRV*CGDSGS
Trigger: GCTTCCGCTGTCTCCACAGCAGACACGGGACGGATT...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCACTGCCCCGAGTGAATaGGTTTGGCATGGTACGAAT +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRTAPSE*VWHGTN
Trigger: ATTCGTACCATGCCAAACGCATTCACTCGGGGCAGT...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACTGACAGGGCAGGGCTaGACGCTGCCCCCGTGCCGG +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPLTGQG*TLPPCR
Trigger: CCGGCACGGGGGCAGCGTGCAGCCCTGCCCTGTCAG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCGGAAGGAAATGCTTCTaGACATGCGCAGCCGACCAT +
Preference number: 2 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGGRKCF*TCAADH
Trigger: ATGGTCGGCTGCGCATGTCCAGAAGCATTTCCTTCC...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCATCAGCAGTTTCACGTaGCTCAGCGTATGGACCATC +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRISSFT*LSVWTI
Trigger: GATGGTCCATACGCTGAGCCACGTGAAACTGCTGAT...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTACCTCCCAGGCGGGCGTaGAGTTTGACCAGTTCCACC +
Preference number: 2 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVPPRRA*SLTSST
Trigger: GGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGG...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCAAGCTCATTCACAGATaGCAGCAAAGGGGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGKLIHR*QQRGSL
Trigger: CAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGCTT...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCGTCGCAGGAAGGAAATaGTTCTGGACATGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFVAGRK*FWTCAA
Trigger: GGCTGCGCATGTCCAGAAGCATTTCCTTCCTGCGAC...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCACTGCCCCGAGTGAATaGGTTTGGCATGGTACGAAT +
Preference number: 2 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGTAPSE*VWHGTN
Trigger: ATTCGTACCATGCCAAACGCATTCACTCGGGGCAGT...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCAGCCCTCCCCTTGGGTaGTGTGTAGATGGATATTTT +
Preference number: 2 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRSPPLG*CVDGYF
Trigger: AAAATATCCATCTACACAGCACCCAAGGGGAGGGCT...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCACTGGAGGCCAGAGTTaGATATCTACCAGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGTGGQS*ISTSQA
Trigger: TGCCTGACTGGTAGATATGCAACTCTGGCCTCCAGT...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCTCTTTCTGCTGGGGTTaGGTCTTTTACCTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFSFCWG*VFYLGL
Trigger: AAGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGA...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCCCGAGTGAATGCGTTTaGCATGGTACGAATGAGGCT +
Preference number: 2 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGPSECV*HGTNEA
Trigger: AGCCTCATTCGTACCATGCCAAACGCATTCACTCGG...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAAGCCCTCTCTGTAGGTaGGGCCCAGATCCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVSPLCR*GPDPAF
Trigger: GAAGGCTGGATCTGGGCCCCACCTACAGAGAGGGCT...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAAATCCGTCCCGTGTCTaGTGTGGAGACAGCGGAAGC +
Preference number: 2 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVNPSRV*CGDSGS
Trigger: GCTTCCGCTGTCTCCACAGCAGACACGGGACGGATT...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCGGAAGGAAATGCTTCTaGACATGCGCAGCCGACCAT +
Preference number: 2 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFGRKCF*TCAADH
Trigger: ATGGTCGGCTGCGCATGTCCAGAAGCATTTCCTTCC...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCCCCAGCCCTCCCCTTaGGTGCTGTGTAGATGGATA +
Preference number: 2 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAPQPSP*VLCRWI
Trigger: TATCCATCTACACAGCACCCAAGGGGAGGGCTGGGG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGACACGGCGCACTACATaGGGTGAGACTGTTTTTAGT +
Preference number: 2 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVETRRTT*GETVFS
Trigger: ACTAAAAACAGTCTCACCCCATGTAGTGCGCCGTGT...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCTTGGCATGGTACGAATaGGGCTCCCGTCTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: AHSQMTAKGELDHLATPSLAWYE*GSRLWN
Trigger: ATTCCACAGACGGGAGCCTCATTCGTACCATGCCAA...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 90 bp TCTCCGCTGCTGAGAAGGAAACCTAGGTGCACAAAGTCTGAGGTTTaGTCTCTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: SPLLRRKPRCTKSEV*SLDWAFCTGVQMPS
Trigger: GGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCTCAGCAGCGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 90 bp CAACACCCAAAACAGAAAGCTCTGCATCCCCAGGTCACACCTGGGTaGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGAC +
Preference number: 2 (lower is better)
Translates to: QHPKQKALHPQVTPG*VRRRKQLVRAQHAD
Trigger: GTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCCAGGTGTGACCTGGGGATGCAGAGCTTTCTGTTTTGGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCTCTTTCTGCTGGGGTTaGGTCTTTTACCTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFSFCWG*VFYLGL
Trigger: AAGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGA...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTGCGGTGTCTTTCTGCTaGGGTTGGGTCTTTTACCTG +
Preference number: 2 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAAVSFC*GWVFYL
Trigger: CAGGTAAAAGACCCAACCCCAGCAGAAAGACACCGC...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTTCATGGGAGTCACCCTaGAGCCCCCAAGTGCCATGG +
Preference number: 2 (lower is better)
Translates to: ASKQNISSFTWLSVWTICSWESP*SPQVPW
Trigger: CCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGA...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAACCACAGCCTCTGCATaGCTCCCAGGTGCCCACCAC +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPTTASA*LPGAHH
Trigger: GTGGTGGGCACCTGGGAGCCATGCAGAGGCTGTGGT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACTAGGGGCGCCGGGATaGTCGCAGGAAGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPLGAPG*SQEGNA
Trigger: AGCATTTCCTTCCTGCGACCATCCCGGCGCCCCTAG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCATCATGGGAGTCACCCTaGAGCCCCCAAGTGCCATGG +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPSWESP*SPQVPW
Trigger: CCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGA...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 90 bp CATGCTAATACTGTCCTAACACAGCCTGGAGCTAGGCGATTTCCTTaGACCACAAAGTACCTGGAGTCTAACTCAGCACCACAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: HANTVLTQPGARRFP*TTKYLESNSAPQPL
Trigger: CAGAGGCTGTGGTGCTGAGTTAGACTCCAGGTACTTTGTGGTCAAAGGAAATCGCCTAGCTCCAGGCTGTGTTAGGACAGTATTAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCGCATTTCAAGAACGCTaGCTTGCCTTTCTCAGAACT +
Preference number: 2 (lower is better)
Translates to: AHSQMTAKGELDHLATPSAFQER*LAFLRT
Trigger: AGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAAATGC...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTTGCTTAAAGTATTTGTaGGGCCAAAAAGCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFCLKYL*GQKAWL
Trigger: CAACCAGGCTTTTTGGCCCCACAAATACTTTAAGCA...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCTGCTTAAAGTATTTGTaGGGCCAAAAAGCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFCLKYL*GQKAWL
Trigger: CAACCAGGCTTTTTGGCCCCACAAATACTTTAAGCA...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCGTTTTGTCTCTGGACTaGGCATTTTGCACAGGAGTA +
Preference number: 2 (lower is better)
Translates to: AHSQMTAKGELDHLATPSVLSLD*AFCTGV
Trigger: TACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAAC...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACCCGCGGTGTCTTTCTaGTGGGGTTGGGTCTTTTAC +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPPAVSF*WGWVFY
Trigger: GTAAAAGACCCAACCCCAGCAGAAAGACACCGCGGG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTTACGTGCCGGGCCTCTaGACCCCAGGGCCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCYVPGL*TPGPVL
Trigger: AAGAACAGGCCCTGGGGTGCAGAGGCCCGGCACGTA...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAGCACAGGAGTACAGATaGCCTCCAGAGGGTGCAGAT +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPAQEYR*PPEGAD
Trigger: ATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGC...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTGCGGTGTCTTTCTGCTaGGGTTGGGTCTTTTACCTG +
Preference number: 2 (lower is better)
Translates to: ASKQNISSFTWLSVWTICAVSFC*GWVFYL
Trigger: CAGGTAAAAGACCCAACCCCAGCAGAAAGACACCGC...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCATTTTCATGGAAGACTaGAGGCCAGAGTTGCATATC +
Preference number: 2 (lower is better)
Translates to: AHSQMTAKGELDHLATPSIFMED*RPELHI
Trigger: GATATGCAACTCTGGCCTCCAGTCTTCCATGAAAAT...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCCGAGCACAACATGCTaGCAGAGCTGGCTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCPSTTC*QSWLWP
Trigger: TGGCCACAGCCAGCTCTGTCAGCATGTTGTGCTCGG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAATGCCCTCCAGAGGGTaGAGATTCAAGGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPMPSRG*RFKVCV
Trigger: CACACACACCTTGAATCTGCACCCTCTGGAGGGCAT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAAAGACACAAAGTTGCTaGTTATCTGGGTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: FYLVNTVSARALTAIHPPKTQSC*LSGSRV
Trigger: GACCCTGGACCCAGATAAGCAGCAACTTTGTGTCTT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR TCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTGCATTTCAAGAACGCTaGCTTGCCTTTCTCAGAACT +
Preference number: 2 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCAFQER*LAFLRT
Trigger: AGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAAATGC...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp AGCTGGCTGTGGCCAGTCTTGGGTGCCGGGCCAGCCTaGGGGGTGGGCACCGCCGGAGCCGGCCGTCAGTGT +
Preference number: 3 (lower is better)
Translates to: SWLWPVLGAGPA*GVGTAGAGRQC
Trigger: ACACTGACGGCCGGCTCCGGCGGTGCCCACCCCTCAGGCTGGCCCGGCACCCAAGACTGGCCACAGCCAGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp GGTCGGCCCAAGCACACAATGCCCCCGGTCCAGCCCTaGGCCCTCTCTGTAGGTGGGGCCCAGATCCAGCCT +
Preference number: 3 (lower is better)
Translates to: GRPKHTMPPVQP*ALSVGGAQIQP
Trigger: AGGCTGGATCTGGGCCCCACCTACAGAGAGGGCTCAGGGCTGGACCGGGGGCATTGTGTGCTTGGGCCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp CCTGGGGACGCAAATCTCCCGACAGAGAACAGCGTCTaGCACCGGCCCGGGTCGGCCCAAGCACACAATGCC +
Preference number: 3 (lower is better)
Translates to: PGDANLPTENSV*HRPGSAQAHNA
Trigger: GGCATTGTGTGCTTGGGCCGACCCGGGCCGGTGGCAGACGCTGTTCTCTGTCGGGAGATTTGCGTCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp AGGGGCGCCGGGATGGTCGCAGGAAGGAAATGCTTCTaGACATGCGCAGCCGACCATGACCCCAGCCACGGC +
Preference number: 3 (lower is better)
Translates to: RGAGMVAGRKCF*TCAADHDPSHG
Trigger: GCCGTGGCTGGGGTCATGGTCGGCTGCGCATGTCCAGAAGCATTTCCTTCCTGCGACCATCCCGGCGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp GCCGGGATGGTCGCAGGAAGGAAATGCTTCTGGACATaGGCAGCCGACCATGACCCCAGCCACGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: AGMVAGRKCFWT*AADHDPSHGRR
Trigger: CCTCCTGCCGTGGCTGGGGTCATGGTCGGCTGCGCATGTCCAGAAGCATTTCCTTCCTGCGACCATCCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp AATGCCCCCGGTCCAGCCCTGAGCCCTCTCTGTAGGTaGGGCCCAGATCCAGCCTTCCTTGAGCGGAGCACT +
Preference number: 3 (lower is better)
Translates to: NAPGPALSPLCR*GPDPAFLERST
Trigger: AGTGCTCCGCTCAAGGAAGGCTGGATCTGGGCCCCACCTACAGAGAGGGCTCAGGGCTGGACCGGGGGCATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp GTCCTGTTTCAGGGCCGTCCTGGTAGCGGCTGGCCCTaGGCAGTCACTGACCCAGAGTTTTCTGGACCAGGC +
Preference number: 3 (lower is better)
Translates to: VLFQGRPGSGWP*AVTDPEFSGPG
Trigger: GCCTGGTCCAGAAAACTCTGGGTCAGTGACTGCGCAGGGCCAGCCGCTACCAGGACGGCCCTGAAACAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp CTGCTGTCCTGGCTTCTCCCCCTAGGGGCGCCGGGATaGTCGCAGGAAGGAAATGCTTCTGGACATGCGCAG +
Preference number: 3 (lower is better)
Translates to: LLSWLLPLGAPG*SQEGNASGHAQ
Trigger: CTGCGCATGTCCAGAAGCATTTCCTTCCTGCGACCATCCCGGCGCCCCTAGGGGGAGAAGCCAGGACAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCCCACGGCACGAGGCCTaGGGGATACCACCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: FWTRPASRISRHDGRTAFPRHEA*GIPPGP
Trigger: TGGCCCAGGTGGTATCCCCAAGGCCTCGTGCCGTGG...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCCAGATCCAGCCTTCCTaGAGCGGAGCACTGGGCACC +
Preference number: 3 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRQIQPS*SGALGT
Trigger: GGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCTG...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCCCACGGCACGAGGCCTaGGGGATACCACCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: AHSQMTAKGELDHLATPSPRHEA*GIPPGP
Trigger: TGGCCCAGGTGGTATCCCCAAGGCCTCGTGCCGTGG...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp AGATGTGTCCTGTTTCAGGGCCGTCCTGGTAGCGGCTaGCCCTGCGCAGTCACTGACCCAGAGTTTTCTGGA +
Preference number: 3 (lower is better)
Translates to: RCVLFQGRPGSG*PCAVTDPEFSG
Trigger: TCCAGAAAACTCTGGGTCAGTGACTGCGCAGGGCCAGCCGCTACCAGGACGGCCCTGAAACAGGACACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCCAGATCCAGCCTTCCTaGAGCGGAGCACTGGGCACC +
Preference number: 3 (lower is better)
Translates to: AHSQMTAKGELDHLATPSQIQPS*SGALGT
Trigger: GGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCTG...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp GGGGTTTCTGGCCTCGGACCCCTCTGCAGTCTAGTGTaGCTTAAAGCTACATCAAGGTCAGCCGCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GVSGLGPLCSLV*LKATSRSAAGR
Trigger: CCTCCCTGCGGCTGACCTTGATGTAGCTTTAAGTCACACTAGACTGCAGAGGGGTCCGAGGCCAGAAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp CAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTaGCAGAGCTGGCTGTGGCCAGTCTTGGGTGCCGGG +
Preference number: 3 (lower is better)
Translates to: QKKETACPSTTC*QSWLWPVLGAG
Trigger: CCCGGCACCCAAGACTGGCCACAGCCAGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp CCAGGTGCCCACCACCTGGCGAAGCTCATTCACAGATaGCAGCAAAGGGGGAGCTTGATCATCTGGCGACTC +
Preference number: 3 (lower is better)
Translates to: PGAHHLAKLIHR*QQRGSLIIWRL
Trigger: GAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGCTTCGCCAGGTGGTGGGCACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGGTCTTTCTGCTGGGGTaGGGTCTTTTACCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVEVFLLG*GLLPGS
Trigger: AGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGAC...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTGGCCAAAAAGCCTGGTaGAAGGGAGGCCTCATGGGA +
Preference number: 3 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFGQKAW*KGGLMG
Trigger: TCCCATGAGGCCTCCCTTCAACCAGGCTTTTTGGCC...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCGAAGAAGGAAACAGCTaGTCCGAGCACAACATGCTG +
Preference number: 3 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGEEGNS*SEHNML
Trigger: CAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTC...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCGCTAGGCGATTTCCTTaGACCACAAAGTACCTGGAG +
Preference number: 3 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGARRFP*TTKYLE
Trigger: CTCCAGGTACTTTGTGGTCAAAGGAAATCGCCTAGC...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp AGATGCCCTCCAGAGGGTGCAGATTCAAGGTGTGTGTaGCTATGCAGGTGGGGCAGGAAGAGGAAGTCCATA +
Preference number: 3 (lower is better)
Translates to: RCPPEGADSRCV*LCRWGRKRKSI
Trigger: TATGGACTTCCTCTTCCTGCCCCACCTGCATAGGCACACACACCTTGAATCTGCACCCTCTGGAGGGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp GCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTaGAGATTCAAGGTGTGTGTGCCTATGCAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: AFCTGVQMPSRG*RFKVCVPMQVG
Trigger: CCCCACCTGCATAGGCACACACACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCGACTGGAGGCCAGAGTaGCATATCTACCAGTCAGGC +
Preference number: 3 (lower is better)
Translates to: AHSQMTAKGELDHLATPSDWRPE*HIYQSG
Trigger: GCCTGACTGGTAGATATGCAACTCTGGCCTCCAGTC...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp CGAAGCTCATTCACAGATGACAGCAAAGGGGGAGCTTaGTCATCTGGCGACTCCTTCCTGCTGCTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: RSSFTDDSKGGA*SSGDSFLLLLP
Trigger: TGGGAGAAGCAGCAGGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp TGTCTCTGGACTGGGCATTTTGCACAGGAGTACAGATaGCCTCCAGAGGGTGCAGATTCAAGGTGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: CLWTGHFAQEYR*PPEGADSRCVC
Trigger: GCACACACACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGGTCTTTCTGCTGGGGTaGGGTCTTTTACCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVVFLLG*GLLPGS
Trigger: AGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGAC...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCACAAAGTCTGAGGTTTaGTCTCTGGACTGGGCATTT +
Preference number: 3 (lower is better)
Translates to: FWTRPASRISRHDGRTAFTKSEV*SLDWAF
Trigger: AAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGT...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp TCAGTAACAAAGCCTAAGAACGTGGGAATGAAAGTCTaGTGCAGGACAGGGGTTTCTGGCCTCGGACCCCTC +
Preference number: 3 (lower is better)
Translates to: SVTKPKNVGMKV*CRTGVSGLGPL
Trigger: GAGGGGTCCGAGGCCAGAAACCCCTGTCCTGCATCAGACTTTCATTCCCACGTTCTTAGGCTTTGTTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp TTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATaGTGGTCGCACAGCCTTCATGCTAATACTGTCCTA +
Preference number: 3 (lower is better)
Translates to: FLDQACLKDQQA*WSHSLHANTVL
Trigger: TAGGACAGTATTAGCATGAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp AACAGAAAGCTCTGCATCCCCAGGTCACACCTGGGTTaGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAAC +
Preference number: 3 (lower is better)
Translates to: NRKLCIPRSHLG*SEEGNSLSEHN
Trigger: GTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCCAGGTGTGACCTGGGGATGCAGAGCTTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp TGGCTTTCTAGAACGGTTAATACTGCCCCGAGTGAATaGGTTTGGCATGGTACGAATGAGGCTCCCGTCTGT +
Preference number: 3 (lower is better)
Translates to: WLSRTVNTAPSE*VWHGTNEAPVC
Trigger: ACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAGTATTAACCGTTCTAGAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp TCTAGAACGGTTAATACTGCCCCGAGTGAATGCGTTTaGCATGGTACGAATGAGGCTCCCGTCTGTGGAATC +
Preference number: 3 (lower is better)
Translates to: SRTVNTAPSECV*HGTNEAPVCGI
Trigger: GATTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAGTATTAACCGTTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp CCTAGGTGCACAAAGTCTGAGGTTTTGTCTCTGGACTaGGCATTTTGCACAGGAGTACAGATGCCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PRCTKSEVLSLD*AFCTGVQMPSR
Trigger: TCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGTGCACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTAGGCGGGCGTGGAGTTaGACCAGTTCCACCACCGGC +
Preference number: 3 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCRRAWS*TSSTTG
Trigger: GCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCT...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp AAAGAACAGTCTCCGCTGCTGAGAAGGAAACCTAGGTaGACAAAGTCTGAGGTTTTGTCTCTGGACTGGGCA +
Preference number: 3 (lower is better)
Translates to: KEQSPLLRRKPR*TKSEVLSLDWA
Trigger: TGCCCAGTCCAGAGACAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCTCAGCAGCGGAGACTGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp CCACTTCAAGGCAACTCAAAGAACAGTCTCCGCTGCTaGGAAGGAAACCTAGGTGCACAAAGTCTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: PLQGNSKNSLRC*EGNLGAQSLRF
Trigger: AAACCTCAGACTTTGTGCACCTAGGTTTCCTTCTCAGCAGCGGAGACTGTTCTTTGAGTTGCCTTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCGTGCACAGTATATACTaGTGTCCAGGAGTTAACTTT +
Preference number: 3 (lower is better)
Translates to: AHSQMTAKGELDHLATPSVHSIY*CPGVNF
Trigger: AAAGTTAACTCCTGGACACAAGTATATACTGTGCAC...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp AAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATaGACCATCTGTGTCCAGGGAAAAGGCTGTTTCCTA +
Preference number: 3 (lower is better)
Translates to: KQNISSFTWLSV*TICVQGKGCFL
Trigger: TAGGAAACAGCCTTTTCCCTGGACACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CCA 72 bp GTGTGTGCATCTAAACAAAACATCAGCAGTTTCACGTaGCTCAGCGTATGGACCATCTGTGTCCAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: VCASKQNISSFT*LSVWTICVQGK
Trigger: TTTTCCCTGGACACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR-3UTR CAA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCATATCTTTGGCCAGAGTaGGGACTAACAATTCAAGCC +
Preference number: 3 (lower is better)
Translates to: FYLVNTVSARALTAIHPPYLWPE*GLTIQA
Trigger: GGCTTGAATTGTTAGTCCCAACTCTGGCCAAAGATA...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR GCA 72 bp CCAAAATGTTCTGTGACCCCAAAGACACAAAGTTGCTaGTTATCTGGGTCCAGGGTCAGTACAATTAAACTC +
Preference number: 3 (lower is better)
Translates to: PKCSVTPKTQSC*LSGSRVSTIKL
Trigger: GAGTTTAATTGTACTGACCCTGGACCCAGATAAGCAGCAACTTTGTGTCTTTGGGGTCACAGAACATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR TCA 72 bp AGTTGCATATCTACCAGTCAGGCATTTCAAGAACGCTaGCTTGCCTTTCTCAGAACTAAAACTTCCGATTTG +
Preference number: 3 (lower is better)
Translates to: SCISTSQAFQER*LAFLRTKTSDL
Trigger: CAAATCGGAAGTTTTAGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAAATGCCTGACTGGTAGATATGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCACTGACAGGGCAGGGCTaGACGCTGCCCCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPLTGQG*TLPPCR
Trigger: CCGGCACGGGGGCAGCGTGCAGCCCTGCCCTGTCAG...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAGTGGCCAGTCTTGGGTaGCGGGCCAGCCTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPVASLG*RASLRG
Trigger: ACCCCTCAGGCTGGCCCGGCACCCAAGACTGGCCAC...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAGGTAGCGGCTGGCCCTaGGCAGTCACTGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPGSGWP*AVTDPE
Trigger: CTCTGGGTCAGTGACTGCGCAGGGCCAGCCGCTACC...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGGGCGACTGCCTCCCTaGCACGCCTTCCGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSGRLPP*HAFRGG
Trigger: CCCTCCGCGGAAGGCGTGGCAGGGAGGCAGTCGCCC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAGCCAGCAAGACAGGCTaGAAGGGCTGTGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPASKTG*KGCGSR
Trigger: GCGACTGCCACAGCCCTTCCAGCCTGTCTTGCTGGC...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCATGCGCAGCCGACCATaGCCCCAGCCACGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTMRSRP*PQPRQE
Trigger: CTCCTGCCGTGGCTGGGGTCATGGTCGGCTGCGCAT...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCGCACCGCAGGGCGACTaGCTCCCTGCCACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRAPQGD*LPATPS
Trigger: GGAAGGCGTGGCAGGGAGGCAGTCGCCCTGCGGTGC...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCTACGTGCCGGGCCTCTaGACCCCAGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTYVPGL*TPGPVL
Trigger: AAGAACAGGCCCTGGGGTGCAGAGGCCCGGCACGTA...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGGTAGCGGCTGGCCCTaGGCAGTCACTGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSGSGWP*AVTDPE
Trigger: CTCTGGGTCAGTGACTGCGCAGGGCCAGCCGCTACC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAAGTGTGTGGTCTGGGTaGGGGTCCAGGCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPSVWSG*GSRQHL
Trigger: TAAATGCTGCCTGGACCCCCACCCAGACCACACACT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCGGCTGTGGCCAGTCTTaGGTGCCGGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFGCGQS*VPGQPE
Trigger: CTCAGGCTGGCCCGGCACCCAAGACTGGCCACAGCC...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCTCCGGGCTCGGGGCTaGGATCCGGTACACCACATG +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFLRARG*DPVHHM
Trigger: CATGTGGTGTACCGGATCTCAGCCCCGAGCCCGGAG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAGGAAGGAAATGCTTCTaGACATGCGCAGCCGACCAT +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPGRKCF*TCAADH
Trigger: ATGGTCGGCTGCGCATGTCCAGAAGCATTTCCTTCC...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCCTAGGGGCGCCGGGATaGTCGCAGGAAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTLGAPG*SQEGNA
Trigger: AGCATTTCCTTCCTGCGACCATCCCGGCGCCCCTAG...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGCCGGCCGTCAGTGTGTaGTCTGGGTGGGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVEPAVSV*SGWGSR
Trigger: CCTGGACCCCCACCCAGACCACACACTGACGGCCGG...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGCCCCGAGTGAATGCGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAAAGGCTGGAAGGGCTGTaGCAGTCGCCGCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPRVNAFGMVRMRLPSVERLEGL*QSPPPP
Trigger: GGGAGGCGGCGGCGACTGCCACAGCCCTTCCAGCCT...TTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTCCTCCCCGGGCAGCCTaGAGCTCCATAAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSPPRAA*SSIRTA
Trigger: GGCAGTTCTTATGGAGCTTCAGGCTGCCCGGGGAGG...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTCGCGGTTCATGGCGATaGACCGTTCTGCCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSRGSWR*TVLPWA
Trigger: AGCCCACGGCAGAACGGTTCATCGCCATGAACCGCG...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp CTGCCCCGAGTGAATGCGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAAGGCGGGCGTGGAGTTTaGCCAGTTCCACCACCGGCG +
Preference number: 4 (lower is better)
Translates to: LPRVNAFGMVRMRLPSVEGGRGV*PVPPPA
Trigger: CGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCC...TTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCACATCCACAGCAACCTaGCAACCTCCCAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFTSTAT*QPPRRA
Trigger: CGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGT...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGGAAGACCCCGGGGTTaGACAGGCAGTAGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSGRPRG*TGSSEK
Trigger: CTTCTCGCTACTGCCTGTGCAACCCCGGGGTCTTCC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCCCTCGAGGATCAGTCTaGGCCACGGTACGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSPRGSV*ATVRSG
Trigger: TCCAGAGCGTACCGTGGCCCAGACTGATCCTCGAGG...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCCTCCCAGGCGGGCGTaGAGTTTGACCAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFPPRRA*SLTSST
Trigger: GGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGCCCCGAGTGAATGCGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAACCGGCCGTCAGTGTGTaGTCTGGGTGGGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPRVNAFGMVRMRLPSVEPAVSV*SGWGSR
Trigger: CCTGGACCCCCACCCAGACCACACACTGACGGCCGG...TTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAGGCTGGAAGGGCTGTaGCAGTCGCCGCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFRLEGL*QSPPPP
Trigger: GGGAGGCGGCGGCGACTGCCACAGCCCTTCCAGCCT...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGCCAAAAAGCCTGGTTaGAGGGAGGCCTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSAKKPG*REASWE
Trigger: CTCCCATGAGGCCTCCCTTCAACCAGGCTTTTTGGC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCAGATCCAGCCTTCCTTaGGCGGAGCACTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFRSSLP*AEHWAP
Trigger: AGGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCT...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAAGGCATTGCTTTCTATaGAGCACTAAGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPRHCFL*STKCCS
Trigger: GGAGCAGCACTTAGTGCTTCATAGAAAGCAATGCCT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAGGGCGACTGCCTCCCTaGCACGCCTTCCGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVGRLPP*HAFRGG
Trigger: CCCTCCGCGGAAGGCGTGGCAGGGAGGCAGTCGCCC...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCGATTCAAGGTGTGTGTaGCTATGCAGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTDSRCV*LCRWGR
Trigger: CCTGCCCCACCTGCATAGGCACACACACCTTGAATC...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCCTGGCGACTCCTTCCTaGTGCTTCTCCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSLATPS*CFSQHP
Trigger: TGGGTGTTGGGAGAAGCAGCAGGAAGGAGTCGCCAG...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAAAGACACAAAGTTGCTaGTTATCTGGGTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPKTQSC*LSGSRV
Trigger: GACCCTGGACCCAGATAAGCAGCAACTTTGTGTCTT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCATCTTTCTGCTGGGGTTaGGTCTTTTACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPSFCWG*VFYLGL
Trigger: AAGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGA...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTGTCCCGTGTCTGCTGTaGAGACAGCGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSVPCLL*RQRKLL
Trigger: CAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGAC...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCCAGGTGCCCACCACCTaGCGAAGCTCATTCACAGAT +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTQVPTT*RSSFTD
Trigger: ATCTGTGAATGAGCTTCGCCAGGTGGTGGGCACCTG...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 72 bp GCCCTCTCTGTAGGTGGGGCCCAGATCCAGCCTTCCTaGAGCGGAGCACTGGGCACCTCCTATCCTTACATC +
Preference number: 4 (lower is better)
Translates to: ALSVGGAQIQPS*SGALGTSYPYI
Trigger: GATGTAAGGATAGGAGGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCTGGGCCCCACCTACAGAGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGATGCGCAGCCGACCATaGCCCCAGCCACGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVMRSRP*PQPRQE
Trigger: CTCCTGCCGTGGCTGGGGTCATGGTCGGCTGCGCAT...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCGGAAGACCCCGGGGTTaGACAGGCAGTAGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGGRPRG*TGSSEK
Trigger: CTTCTCGCTACTGCCTGTGCAACCCCGGGGTCTTCC...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGCACAGGAGTACAGATaGCCTCCAGAGGGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSAQEYR*PPEGAD
Trigger: ATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGGTGGCCAGTCTTGGGTaGCGGGCCAGCCTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVVASLG*RASLRG
Trigger: ACCCCTCAGGCTGGCCCGGCACCCAAGACTGGCCAC...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCTGGCGACTCCTTCCTaGTGCTTCTCCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFLATPS*CFSQHP
Trigger: TGGGTGTTGGGAGAAGCAGCAGGAAGGAGTCGCCAG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCCACGTGTCTGTGGACTaGAAGACCCCGGGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGHVSVD*KTPGLH
Trigger: GTGCAACCCCGGGGTCTTCCAGTCCACAGACACGTG...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCCGTAGCACGTGTCTGTaGACTGGAAGACCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGRSTCL*TGRPRG
Trigger: ACCCCGGGGTCTTCCAGTCCACAGACACGTGCTACG...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCCACGGCACGAGGCCTTaGGGATACCACCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFHGTRP*GYHLGH
Trigger: GTGGCCCAGGTGGTATCCCCAAGGCCTCGTGCCGTG...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCCTAGGGGCGCCGGGATaGTCGCAGGAAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: FWTRPASRISRHDGRTAFLGAPG*SQEGNA
Trigger: AGCATTTCCTTCCTGCGACCATCCCGGCGCCCCTAG...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTACATCCACAGCAACCTaGCAACCTCCCAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFTSTAT*QPPRRA
Trigger: CGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGT...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCAGCAAAGGGGGAGCTTaGTCATCTGGCGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFSKGGA*SSGDSF
Trigger: GAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCT...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CTGCCCCGAGTGAATGCGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAAATGCGATCAATCTTCTaGGCCTCCCCGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPRVNAFGMVRMRLPSVEMRSIF*ASPGSL
Trigger: CAGGCTGCCCGGGGAGGCGCAGAAGATTGATCGCAT...TTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGAATCCGTCCCGTGTCTaGTGTGGAGACAGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVENPSRV*CGDSGS
Trigger: GCTTCCGCTGTCTCCACAGCAGACACGGGACGGATT...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTACAGAGAACAGCGTCTaGCACCGGCCCGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRATENSV*HRPGSA
Trigger: GGCCGACCCGGGCCGGTGGCAGACGCTGTTCTCTGT...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCGATTCAAGGTGTGTGTaGCTATGCAGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFDSRCV*LCRWGR
Trigger: CCTGCCCCACCTGCATAGGCACACACACCTTGAATC...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAAGAAGGAAACCTAGGTaGACAAAGTCTGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPRRKPR*TKSEVL
Trigger: CAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTTTTCTGGACCAGGCCTaGCTCAAGGATCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSFLDQA*LKDQQA
Trigger: TGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAA...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGCGGTGTCTTTCTGCTaGGGTTGGGTCTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSAVSFC*GWVFYL
Trigger: CAGGTAAAAGACCCAACCCCAGCAGAAAGACACCGC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCACGTGGCTCAGCGTATaGACCATCTGTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFTWLSV*TICVQG
Trigger: TCCCTGGACACAGATGGTCCATACGCTGAGCCACGT...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTCAGGACAGGGGTTTCTaGCCTCGGACCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFQDRGF*PRTPLQ
Trigger: CTGCAGAGGGGTCCGAGGCCAGAAACCCCTGTCCTG...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCAGTGTGTGGTCTGGGTaGGGGTCCAGGCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRSVWSG*GSRQHL
Trigger: TAAATGCTGCCTGGACCCCCACCCAGACCACACACT...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTGGCTGTGGCCAGTCTTaGGTGCCGGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAGCGQS*VPGQPE
Trigger: CTCAGGCTGGCCCGGCACCCAAGACTGGCCACAGCC...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCGCCAGCAAGACAGGCTaGAAGGGCTGTGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFASKTG*KGCGSR
Trigger: GCGACTGCCACAGCCCTTCCAGCCTGTCTTGCTGGC...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCCCTCCCCGGGCAGCCTaGAGCTCCATAAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: AHSQMTAKGELDHLATPSPPRAA*SSIRTA
Trigger: GGCAGTTCTTATGGAGCTTCAGGCTGCCCGGGGAGG...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTGGTTTTCCAACGGGATaGTTCCCCTGGGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSGFPTG*FPWAPY
Trigger: ATAAGGAGCCCAGGGGAATCATCCCGTTGGAAAACC...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTAGATCCAGCCTTCCTTaGGCGGAGCACTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFRSSLP*AEHWAP
Trigger: AGGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCT...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTAACAGTCTCCGCTGCTaGGAAGGAAACCTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSNSLRC*EGNLGA
Trigger: TGCACCTAGGTTTCCTTCTCAGCAGCGGAGACTGTT...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCGCCCTGCGCAGTCACTaGCCCAGAGTTTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFALRSH*PRVFWT
Trigger: GGTCCAGAAAACTCTGGGTCAGTGACTGCGCAGGGC...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCCCCGCGGTGTCTTTCTaGTGGGGTTGGGTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: FWTRPASRISRHDGRTAFPAVSF*WGWVFY
Trigger: GTAAAAGACCCAACCCCAGCAGAAAGACACCGCGGG...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGGTCGCAGGAAGGAAATaGTTCTGGACATGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVEVAGRK*FWTCAA
Trigger: GGCTGCGCATGTCCAGAAGCATTTCCTTCCTGCGAC...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTCTGACAGGGCAGGGCTaGACGCTGCCCCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICLTGQG*TLPPCR
Trigger: CCGGCACGGGGGCAGCGTGCAGCCCTGCCCTGTCAG...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGTCTGGGTTCTCTACGTaGCGGGCCTCTGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVSGFST*RASAPQ
Trigger: CTGGGGTGCAGAGGCCCGGCACGTAGAGAACCCAGA...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGGCACAGGAGTACAGATaGCCTCCAGAGGGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVEAQEYR*PPEGAD
Trigger: ATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGC...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCGAGGCTGTTCCTTCATaGGAGCTGTGGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTEAVPS*ELWEYI
Trigger: TATATACTCCCACAGCTCGCATGAAGGAACAGCCTC...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCGTGGGAATGAAAGTCTaGTGCAGGACAGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFVGMKV*CRTGVS
Trigger: AGAAACCCCTGTCCTGCATCAGACTTTCATTCCCAC...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCGCATTTCAAGAACGCTaGCTTGCCTTTCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTAFQER*LAFLRT
Trigger: AGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAAATGC...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCAAGGATCAGCAGGCATaGTGGTCGCACAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGKDQQA*WSHSLH
Trigger: ATGAAGGCTGTGCGACCATCATGCCTGCTGATCCTT...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCGCACCGCAGGGCGACTaGCTCCCTGCCACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRAPQGD*LPATPS
Trigger: GGAAGGCGTGGCAGGGAGGCAGTCGCCCTGCGGTGC...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCACTGGAGGCCAGAGTTaGATATCTACCAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRTGGQS*ISTSQA
Trigger: TGCCTGACTGGTAGATATGCAACTCTGGCCTCCAGT...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCAGTGAACACAGTATCTaGAAGAGCTCTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTSEHSI*KSSDSH
Trigger: ATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACT...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGCACGTGTCTGTGGACTaGAAGACCCCGGGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVHVSVD*KTPGLH
Trigger: GTGCAACCCCGGGGTCTTCCAGTCCACAGACACGTG...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTACCACCGGCGTCTATCTaGGTTCTCTACGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVPPASI*VLYVPG
Trigger: GCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGG...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCAGCCCTCTCTGTAGGTaGGGCCCAGATCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AHSQMTAKGELDHLATPSSPLCR*GPDPAF
Trigger: GAAGGCTGGATCTGGGCCCCACCTACAGAGAGGGCT...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACCACAGCCTCTGCATaGCTCCCAGGTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVTTASA*LPGAHH
Trigger: GTGGTGGGCACCTGGGAGCCATGCAGAGGCTGTGGT...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACCCCCGGTCCAGCCCTaGGCCCTCTCTGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPPPVQP*ALSVGG
Trigger: CCCACCTACAGAGAGGGCTCAGGGCTGGACCGGGGG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCCGAGCACAACATGCTaGCAGAGCTGGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAPSTTC*QSWLWP
Trigger: TGGCCACAGCCAGCTCTGTCAGCATGTTGTGCTCGG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTAGGCATTGCTTTCTATaGAGCACTAAGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSRHCFL*STKCCS
Trigger: GGAGCAGCACTTAGTGCTTCATAGAAAGCAATGCCT...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCCTTCGTTTCCTCGTTaGCAACATGTCATAGAAGGG +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFPSFPR*QHVIEG
Trigger: CCCTTCTATGACATGTTGGCAACGAGGAAACGAAGG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTAAATGCTTCTGGACATaGGCAGCCGACCATGACCCC +
Preference number: 4 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFKCFWT*AADHDP
Trigger: GGGGTCATGGTCGGCTGCGCATGTCCAGAAGCATTT...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGACTGCCCCGAGTGAATaGGTTTGGCATGGTACGAAT +
Preference number: 4 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVETAPSE*VWHGTN
Trigger: ATTCGTACCATGCCAAACGCATTCACTCGGGGCAGT...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCAGCCCTCCCCTTGGGTaGTGTGTAGATGGATATTTT +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFSPPLG*CVDGYF
Trigger: AAAATATCCATCTACACAGCACCCAAGGGGAGGGCT...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCAAGACACAAAGTTGCTaGTTATCTGGGTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFKTQSC*LSGSRV
Trigger: GACCCTGGACCCAGATAAGCAGCAACTTTGTGTCTT...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCCCTGCCCTTTGTGGCTaGGATTGTAGAGCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGPALCG*DCRAQN
Trigger: GTTTTGAGCTCTACAATCCCAGCCACAAAGGGCAGG...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCCCTGCCCTTTGTGGCTaGGATTGTAGAGCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: FWTRPASRISRHDGRTAFPALCG*DCRAQN
Trigger: GTTTTGAGCTCTACAATCCCAGCCACAAAGGGCAGG...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGCTTGGGGATACCACCTaGGCCACGGTATGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVLGDTT*ATVCSG
Trigger: TCCAGAGCATACCGTGGCCCAGGTGGTATCCCCAAG...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCACGTGGCTCAGCGTATaGACCATCTGTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFTWLSV*TICVQG
Trigger: TCCCTGGACACAGATGGTCCATACGCTGAGCCACGT...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATCAGCAGTTTCACGTaGCTCAGCGTATGGACCATC +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGISSFT*LSVWTI
Trigger: GATGGTCCATACGCTGAGCCACGTGAAACTGCTGAT...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTAGGCTTGTACAAGGTTaGGATCAGCAAACTCATGGA +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSRLVQG*DQQTHG
Trigger: TCCATGAGTTTGCTGATCTCAACCTTGTACAAGCCT...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCTTGGCATGGTACGAATaGGGCTCCCGTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFLAWYE*GSRLWN
Trigger: ATTCCACAGACGGGAGCCTCATTCGTACCATGCCAA...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTGCCAAAAAGCCTGGTTaGAGGGAGGCCTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAAKKPG*REASWE
Trigger: CTCCCATGAGGCCTCCCTTCAACCAGGCTTTTTGGC...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCTCTGCAGTCTAGTGTaGCTTAAAGCTACATCAAGG +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFLCSLV*LKATSR
Trigger: CCTTGATGTAGCTTTAAGTCACACTAGACTGCAGAG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGATCAGCAGGCATaGTGGTCGCACAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFKDQQA*WSHSLH
Trigger: ATGAAGGCTGTGCGACCATCATGCCTGCTGATCCTT...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTTATCTGCAAGAGCTCTaGCAGCCATCCACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFYLQEL*QPSTLQ
Trigger: TTGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATA...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAACAGAGAACAGCGTCTaGCACCGGCCCGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPTENSV*HRPGSA
Trigger: GGCCGACCCGGGCCGGTGGCAGACGCTGTTCTCTGT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTATGCCCTCCAGAGGGTaGAGATTCAAGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFMPSRG*RFKVCV
Trigger: CACACACACCTTGAATCTGCACCCTCTGGAGGGCAT...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTCTTTCTGCTGGGGTTaGGTCTTTTACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVESFCWG*VFYLGL
Trigger: AAGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGA...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCGCGGTGTCTTTCTGCTaGGGTTGGGTCTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFAVSFC*GWVFYL
Trigger: CAGGTAAAAGACCCAACCCCAGCAGAAAGACACCGC...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTACCCCAGCCCTCCCCTTaGGTGCTGTGTAGATGGATA +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVPQPSP*VLCRWI
Trigger: TATCCATCTACACAGCACCCAAGGGGAGGGCTGGGG...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTGTGTGCCTATGCAGGTaGGGCAGGAAGAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAVCLCR*GRKRKS
Trigger: GGACTTCCTCTTCCTGCCCCACCTGCATAGGCACAC...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCCAGGTGCCCACCACCTaGCGAAGCTCATTCACAGAT +
Preference number: 4 (lower is better)
Translates to: AHSQMTAKGELDHLATPSQVPTT*RSSFTD
Trigger: ATCTGTGAATGAGCTTCGCCAGGTGGTGGGCACCTG...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTCGTCCTGGTAGCGGCTaGCCCTGCGCAGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICRPGSG*PCAVTD
Trigger: GTCAGTGACTGCGCAGGGCCAGCCGCTACCAGGACG...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCAAGTTGCTGCTTATCTaGGTCCAGGGTCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFKLLLI*VQGQYN
Trigger: ATTGTACTGACCCTGGACCCAGATAAGCAGCAACTT...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAAAATGCTTCTGGACATaGGCAGCCGACCATGACCCC +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVKCFWT*AADHDP
Trigger: GGGGTCATGGTCGGCTGCGCATGTCCAGAAGCATTT...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTGTCGCAGGAAGGAAATaGTTCTGGACATGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAVAGRK*FWTCAA
Trigger: GGCTGCGCATGTCCAGAAGCATTTCCTTCCTGCGAC...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCTGCATGGCTCCCAGGTaGCCACCACCTGGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRCMAPR*PPPGEA
Trigger: AGCTTCGCCAGGTGGTGGGCACCTGGGAGCCATGCA...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCCTCCGGGATCTTAAATaGCTCGTTCTTAATGCTCTC +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGLRDLK*LVLNAL
Trigger: GAGAGCATTAAGAACGAGCCATTTAAGATCCCGGAG...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCAGAGCTCAAAACAGTTaGGTTTCCGGGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AHSQMTAKGELDHLATPSRAQNS*VSGGPP
Trigger: TGGAGGACCCCCGGAAACCCAACTGTTTTGAGCTCT...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCTGCTTAAAGTATTTGTaGGGCCAAAAAGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRCLKYL*GQKAWL
Trigger: CAACCAGGCTTTTTGGCCCCACAAATACTTTAAGCA...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCCCACCGGCGTCTATCTaGGTTCTCTACGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRPPASI*VLYVPG
Trigger: GCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGG...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTCAGGACAGGGGTTTCTaGCCTCGGACCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICQDRGF*PRTPLQ
Trigger: CTGCAGAGGGGTCCGAGGCCAGAAACCCCTGTCCTG...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTATTTTCATGGAAGACTaGAGGCCAGAGTTGCATATC +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSIFMED*RPELHI
Trigger: GATATGCAACTCTGGCCTCCAGTCTTCCATGAAAAT...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTACCACAGCCTCTGCATaGCTCCCAGGTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICTTASA*LPGAHH
Trigger: GTGGTGGGCACCTGGGAGCCATGCAGAGGCTGTGGT...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACGTCCTGGTAGCGGCTaGCCCTGCGCAGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPRPGSG*PCAVTD
Trigger: GTCAGTGACTGCGCAGGGCCAGCCGCTACCAGGACG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAGGTTTTCCAACGGGATaGTTCCCCTGGGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVGFPTG*FPWAPY
Trigger: ATAAGGAGCCCAGGGGAATCATCCCGTTGGAAAACC...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCCCCCGGTCCAGCCCTaGGCCCTCTCTGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCPPVQP*ALSVGG
Trigger: CCCACCTACAGAGAGGGCTCAGGGCTGGACCGGGGG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCTAAAACTTCCGATTTaGGGTATCAGTAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFLKLPI*GISNKA
Trigger: GGCTTTGTTACTGATACCTCAAATCGGAAGTTTTAG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGAAGCTCATTCACAGATaGCAGCAAAGGGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVKLIHR*QQRGSL
Trigger: CAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGCTT...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCAAGCTCATTCACAGATaGCAGCAAAGGGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AHSQMTAKGELDHLATPSKLIHR*QQRGSL
Trigger: CAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGCTT...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCCTCTGTCATCACCTCTaGAATTTCATATTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRLCHHL*NFIFQP
Trigger: AGGCTGAAATATGAAATTGCAGAGGTGATGACAGAG...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCAAGCTCCATAAGAACTaGCTTAAGGCTTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGKLHKN*LKACTR
Trigger: CCTTGTACAAGCCTTAAGGCAGTTCTTATGGAGCTT...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGCCCCGAGTGAATGCGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAAGTTTTGTCTCTGGACTaGGCATTTTGCACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LPRVNAFGMVRMRLPSVEVLSLD*AFCTGV
Trigger: TACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAAC...TTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTCTCCTATTTTCAGTTTaGTACCACATTAAACTGCCC +
Preference number: 4 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSLLFSV*YHIKLP
Trigger: GGGCAGTTTAATGTGGTACCAAACTGAAAATAGGAG...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTGGCGGGCGTGGAGTTTaGCCAGTTCCACCACCGGCG +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCGGRGV*PVPPPA
Trigger: CGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCC...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAGCCCTGCGCAGTCACTaGCCCAGAGTTTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPALRSH*PRVFWT
Trigger: GGTCCAGAAAACTCTGGGTCAGTGACTGCGCAGGGC...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCCGAGTGAATGCGTTTaGCATGGTACGAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAPSECV*HGTNEA
Trigger: AGCCTCATTCGTACCATGCCAAACGCATTCACTCGG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAAGCCCTCTCTGTAGGTaGGGCCCAGATCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPSPLCR*GPDPAF
Trigger: GAAGGCTGGATCTGGGCCCCACCTACAGAGAGGGCT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCGTTTTGTCTCTGGACTaGGCATTTTGCACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFVLSLD*AFCTGV
Trigger: TACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAAC...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 72 bp AAACAGAAAGCTCTGCATCCCCAGGTCACACCTGGGTaGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAA +
Preference number: 4 (lower is better)
Translates to: KQKALHPQVTPG*VRRRKQLVRAQ
Trigger: TTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCCAGGTGTGACCTGGGGATGCAGAGCTTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCTCCGGGCTCGGGGCTaGGATCCGGTACACCACATG +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCLRARG*DPVHHM
Trigger: CATGTGGTGTACCGGATCTCAGCCCCGAGCCCGGAG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTACTAAGAACGTGGGAATaGAAGTCTGATGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVLRTWE*KSDAGQ
Trigger: CTGTCCTGCATCAGACTTTCATTCCCACGTTCTTAG...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCGGTACCACATTAAACTaGCCCAAAATGTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFGTTLN*PKMFCD
Trigger: GTCACAGAACATTTTGGGGCAGTTTAATGTGGTACC...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAGAGGCTGTTCCTTCATaGGAGCTGTGGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVEAVPS*ELWEYI
Trigger: TATATACTCCCACAGCTCGCATGAAGGAACAGCCTC...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTACACGGCGCACTACATaGGGTGAGACTGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRATRRTT*GETVFS
Trigger: ACTAAAAACAGTCTCACCCCATGTAGTGCGCCGTGT...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCTGTGTAACAGGGTCCTaGGGACGCAAATCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRCVTGS*GRKSPD
Trigger: GTCGGGAGATTTGCGTCCCCAGGACCCTGTTACACA...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGAAGTTGCTGCTTATCTaGGTCCAGGGTCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVKLLLI*VQGQYN
Trigger: ATTGTACTGACCCTGGACCCAGATAAGCAGCAACTT...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 72 bp ACTGTCCTAACACAGCCTGGAGCTAGGCGATTTCCTTaGACCACAAAGTACCTGGAGTCTAACTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TVLTQPGARRFP*TTKYLESNSAP
Trigger: TGGTGCTGAGTTAGACTCCAGGTACTTTGTGGTCAAAGGAAATCGCCTAGCTCCAGGCTGTGTTAGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAAGCAAAGGGGGAGCTTaGTCATCTGGCGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPSKGGA*SSGDSF
Trigger: GAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACAGGCCTTGATGACCTaGCCTTTGTGGCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPQALMT*PLWLGL
Trigger: CAATCCCAGCCACAAAGGGCAGGTCATCAAGGCCTG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTTCTGGGTTCTCTACGTaGCGGGCCTCTGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCSGFST*RASAPQ
Trigger: CTGGGGTGCAGAGGCCCGGCACGTAGAGAACCCAGA...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTATGCCCTCCAGAGGGTaGAGATTCAAGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICMPSRG*RFKVCV
Trigger: CACACACACCTTGAATCTGCACCCTCTGGAGGGCAT...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAAGTGAACACAGTATCTaGAAGAGCTCTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVSEHSI*KSSDSH
Trigger: ATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACT...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCAGAGCTCAAAACAGTTaGGTTTCCGGGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRRAQNS*VSGGPP
Trigger: TGGAGGACCCCCGGAAACCCAACTGTTTTGAGCTCT...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTGGAAGGAAATGCTTCTaGACATGCGCAGCCGACCAT +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICGRKCF*TCAADH
Trigger: ATGGTCGGCTGCGCATGTCCAGAAGCATTTCCTTCC...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCCTCCCAGGCGGGCGTaGAGTTTGACCAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCPPRRA*SLTSST
Trigger: GGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCATGTGTAACAGGGTCCTaGGGACGCAAATCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPCVTGS*GRKSPD
Trigger: GTCGGGAGATTTGCGTCCCCAGGACCCTGTTACACA...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCTCAATTTGTGGTTTCTaGTCTACCACAGACCTAACT +
Preference number: 4 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFSICGF*STTDLT
Trigger: AGTTAGGTCTGTGGTAGACCAGAAACCACAAATTGA...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 72 bp CTGAGAAGGAAACCTAGGTGCACAAAGTCTGAGGTTTaGTCTCTGGACTGGGCATTTTGCACAGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: LRRKPRCTKSEV*SLDWAFCTGVQ
Trigger: CTGTACTCCTGTGCAAAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAAACAGTCTCCGCTGCTaGGAAGGAAACCTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPNSLRC*EGNLGA
Trigger: TGCACCTAGGTTTCCTTCTCAGCAGCGGAGACTGTT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAAAGCTCCATAAGAACTaGCTTAAGGCTTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVKLHKN*LKACTR
Trigger: CCTTGTACAAGCCTTAAGGCAGTTCTTATGGAGCTT...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAAGAAGGAAACCTAGGTaGACAAAGTCTGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVRRKPR*TKSEVL
Trigger: CAAAACCTCAGACTTTGTGCACCTAGGTTTCCTTCT...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCGTAGCACGTGTCTGTaGACTGGAAGACCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCRSTCL*TGRPRG
Trigger: ACCCCGGGGTCTTCCAGTCCACAGACACGTGCTACG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTTCATGGGAGTCACCCTaGAGCCCCCAAGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCSWESP*SPQVPW
Trigger: CCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGA...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGCTCCTATTTTCAGTTTaGTACCACATTAAACTGCCC +
Preference number: 4 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVLLFSV*YHIKLP
Trigger: GGGCAGTTTAATGTGGTACCAAACTGAAAATAGGAG...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCCTAAGAACGTGGGAATaGAAGTCTGATGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRLRTWE*KSDAGQ
Trigger: CTGTCCTGCATCAGACTTTCATTCCCACGTTCTTAG...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCTAAAACTTCCGATTTaGGGTATCAGTAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLVRRRKQLVRAQHADRALKLPI*GISNKA
Trigger: GGCTTTGTTACTGATACCTCAAATCGGAAGTTTTAG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTACTCTGTCATCACCTCTaGAATTTCATATTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVLCHHL*NFIFQP
Trigger: AGGCTGAAATATGAAATTGCAGAGGTGATGACAGAG...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCAGCCCTCCCCTTGGGTaGTGTGTAGATGGATATTTT +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRSPPLG*CVDGYF
Trigger: AAAATATCCATCTACACAGCACCCAAGGGGAGGGCT...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAACTGGAGGCCAGAGTTaGATATCTACCAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPTGGQS*ISTSQA
Trigger: TGCCTGACTGGTAGATATGCAACTCTGGCCTCCAGT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCCCCAGCCCTCCCCTTaGGTGCTGTGTAGATGGATA +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCPQPSP*VLCRWI
Trigger: TATCCATCTACACAGCACCCAAGGGGAGGGCTGGGG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAATCAGCAGTTTCACGTaGCTCAGCGTATGGACCATC +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPISSFT*LSVWTI
Trigger: GATGGTCCATACGCTGAGCCACGTGAAACTGCTGAT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCACACGGCGCACTACATaGGGTGAGACTGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRTRRTT*GETVFS
Trigger: ACTAAAAACAGTCTCACCCCATGTAGTGCGCCGTGT...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTGTGTGCCTATGCAGGTaGGGCAGGAAGAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCVCLCR*GRKRKS
Trigger: GGACTTCCTCTTCCTGCCCCACCTGCATAGGCACAC...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTCTCTGCAGTCTAGTGTaGCTTAAAGCTACATCAAGG +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICLCSLV*LKATSR
Trigger: CCTTGATGTAGCTTTAAGTCACACTAGACTGCAGAG...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTGCATTTCAAGAACGCTaGCTTGCCTTTCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICAFQER*LAFLRT
Trigger: AGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAAATGC...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCAGGCCTTGATGACCTaGCCTTTGTGGCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCQALMT*PLWLGL
Trigger: CAATCCCAGCCACAAAGGGCAGGTCATCAAGGCCTG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 72 bp GCAGCATTTATTTTCATGGAAGACTGGAGGCCAGAGTaGCATATCTACCAGTCAGGCATTTCAAGAACGCTG +
Preference number: 4 (lower is better)
Translates to: AAFIFMEDWRPE*HIYQSGISRTL
Trigger: CAGCGTTCTTGAAATGCCTGACTGGTAGATATGCAACTCTGGCCTCCAGTCTTCCATGAAAATAAATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCAAGGCTTGTACAAGGTTaGGATCAGCAAACTCATGGA +
Preference number: 4 (lower is better)
Translates to: FYLVNTVSARALTAIHPPRLVQG*DQQTHG
Trigger: TCCATGAGTTTGCTGATCTCAACCTTGTACAAGCCT...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR TCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTTATCTGCAAGAGCTCTaGCAGCCATCCACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCYLQEL*QPSTLQ
Trigger: TTGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATA...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTTGCTTAAAGTATTTGTaGGGCCAAAAAGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICCLKYL*GQKAWL
Trigger: CAACCAGGCTTTTTGGCCCCACAAATACTTTAAGCA...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTATTTTCATGGAAGACTaGAGGCCAGAGTTGCATATC +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICIFMED*RPELHI
Trigger: GATATGCAACTCTGGCCTCCAGTCTTCCATGAAAAT...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CCA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTTCAATTTGTGGTTTCTaGTCTACCACAGACCTAACT +
Preference number: 4 (lower is better)
Translates to: ASKQNISSFTWLSVWTICSICGF*STTDLT
Trigger: AGTTAGGTCTGTGGTAGACCAGAAACCACAAATTGA...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR GCA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCCTTCGTTTCCTCGTTaGCAACATGTCATAGAAGGG +
Preference number: 4 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCPSFPR*QHVIEG
Trigger: CCCTTCTATGACATGTTGGCAACGAGGAAACGAAGG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
3UTR CAA 72 bp TGTTCCTTCATGCGAGCTGTGGGAGTATATACATCATaGAATAACAGACACTCCAGAAATCAACAGATGTAC +
Preference number: 4 (lower is better)
Translates to: CSFMRAVGVYTS*NNRHSRNQQMY
Trigger: GTACATCTGTTGATTTCTGGAGTGTCTGTTATTCAATGATGTATATACTCCCACAGCTCGCATGAAGGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS GCA 90 bp TGTCTAGAGCCGCGGGCGCTGCGGCCGCTCACAGCGAAGAGATCCTaGAGACGGCAGCGGCCGCGGGCCGGGGAGCTCACCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CLEPRALRPLTAKRS*RRQRPRAGELTLSS
Trigger: GCTGCTGAGGGTGAGCTCCCCGGCCCGCGGCCGCTGCCGTCTGCAGGATCTCTTCGCTGTGAGCGGCCGCAGCGCCCGCGGCTCTAGACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495176.5
CDS CCA 90 bp CTGGCCGGGCAGAAAGCTCAGCGGGACCAGGGCGGCAAGGAGGCTTaGGAGGCGTGTCTAGAGCCGCGGGCGCTGCGGCCGCTCACAGCG +
Preference number: 5 (lower is better)
Translates to: LAGQKAQRDQGGKEA*EACLEPRALRPLTA
Trigger: CGCTGTGAGCGGCCGCAGCGCCCGCGGCTCTAGACACGCCTCCCAAGCCTCCTTGCCGCCCTGGTCCCGCTGAGCTTTCTGCCCGGCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495176.5
CDS GCA 90 bp GTGCTGGGCTCAGCCAGAACCTCCAGTGGACAGTGGGACCCCGCGTaGTGGGGGCCCGCCTGCAAGAGGTGCCCGGCCCACAGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: VLGSARTSSGQWDPA*WGPACKRCPAHRSS
Trigger: GGACGACCTGTGGGCCGGGCACCTCTTGCAGGCGGGCCCCCAGCACGCGGGGTCCCACTGTCCACTGGAGGTTCTGGCTGAGCCCAGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466543.1
CDS CCA 90 bp CTGGGCTCAGCCAGAACCTCCAGTGGACAGTGGGACCCCGCGTGCTaGGGGCCCGCCTGCAAGAGGTGCCCGGCCCACAGGTCGTCCTCG +
Preference number: 5 (lower is better)
Translates to: LGSARTSSGQWDPAC*GPACKRCPAHRSSS
Trigger: CGAGGACGACCTGTGGGCCGGGCACCTCTTGCAGGCGGGCCCCCAGCACGCGGGGTCCCACTGTCCACTGGAGGTTCTGGCTGAGCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466543.1
CDS GCA 90 bp AGAACCTCCAGTGGACAGTGGGACCCCGCGTGCTGGGGGCCCGCCTaGAAGAGGTGCCCGGCCCACAGGTCGTCCTCGCTCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RTSSGQWDPACWGPA*KRCPAHRSSSLREG
Trigger: GCCTTCCCTGAGCGAGGACGACCTGTGGGCCGGGCACCTCTTGCAGGCGGGCCCCCAGCACGCGGGGTCCCACTGTCCACTGGAGGTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466543.1
ENST00000478541.1
CDS-3UTR CAA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAAGGCGGGCGTGGAGTTaGACCAGTTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPRRAWS*TSSTTG
Trigger: GCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS TCA 90 bp GAAGATGACGAGGTGCGGCCTGATTTTCTTAGTCCAAGGGCCGGCTaGGGCGACTCCCACCAGAAGCCCTGCCTCCTCTCCCCCGGATGC +
Preference number: 5 (lower is better)
Translates to: EDDEVRPDFLSPRAG*GDSHQKPCLLSPGC
Trigger: GCATCCGGGGGAGAGGAGGCAGGGCTTCTGGTGGGAGTCGCCTCAGCCGGCCCTTGGACTAAGAAAATCAGGCCGCACCTCGTCATCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS-3UTR CAA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAGTCTTTCTGCTGGGGTaGGGTCTTTTACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPVFLLG*GLLPGS
Trigger: AGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGAC...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGCCACGGCACGAGGCCTaGGGGATACCACCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVEPRHEA*GIPPGP
Trigger: TGGCCCAGGTGGTATCCCCAAGGCCTCGTGCCGTGG...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCATGATGGTCGCACAGCCTTCAGGCGGGCGTGGAGTTaGACCAGTTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: FWTRPASRISRHDGRTAFRRAWS*TSSTTG
Trigger: GCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCT...GAAGGCTGTGCGACCATCATGCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCCAGATCCAGCCTTCCTaGAGCGGAGCACTGGGCACC +
Preference number: 5 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGQIQPS*SGALGT
Trigger: GGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCTG...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GGCCTCATGGGAGTCACCCTGGAGCCCCCAAGTGCCATGGCCGTCCCTCCCCCAACAAAGTCTGAGGTTTaGTCTCTGGACTGGGCATTT +
Preference number: 5 (lower is better)
Translates to: GLMGVTLEPPSAMAVPPPTKSEV*SLDWAF
Trigger: AAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGT...TGGGGGAGGGACGGCCATGGCACTTGGGGGCTCCAGGGTGACTCCCATGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCGACTGGAGGCCAGAGTaGCATATCTACCAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRDWRPE*HIYQSG
Trigger: GCCTGACTGGTAGATATGCAACTCTGGCCTCCAGTC...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCCAGCAAAGGGGGAGCTaGATCATCTGGCGACTCCTT +
Preference number: 5 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFQQRGS*IIWRLL
Trigger: AAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTG...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTCGTTCTGCCGTGGGCTaGTCACGCACGTTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFRSAVG*SRTLWL
Trigger: CAACCACAACGTGCGTGACAAGCCCACGGCAGAACG...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCTCCTTCGTTTCCTCGTaGCCAACATGTCATAGAAGG +
Preference number: 5 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTSFVSS*PTCHRR
Trigger: CCTTCTATGACATGTTGGCAACGAGGAAACGAAGGA...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGAAGAAGGAAACAGCTaGTCCGAGCACAACATGCTG +
Preference number: 5 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSEEGNS*SEHNML
Trigger: CAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTCAGGTCACACCTGGGTaGGTCAGAAGAAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSQVTPG*VRRRKQ
Trigger: CTGTTTCCTTCTTCTGACCAACCCAGGTGTGACCTG...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCGCTAGGCGATTTCCTTaGACCACAAAGTACCTGGAG +
Preference number: 5 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSARRFP*TTKYLE
Trigger: CTCCAGGTACTTTGTGGTCAAAGGAAATCGCCTAGC...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCCCCAAAGACACAAAGTaGCTGCTTATCTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSPKDTK*LLIWVQ
Trigger: CTGGACCCAGATAAGCAGCAACTTTGTGTCTTTGGG...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS TCA 90 bp CCCATGGCCAGCTGCAGCCTCCCGCACCAGCTATTCAGCAACGTCTaGTGCTGCCGTGGATTTAGCACAAGGATCAAGACCGAGTTAGAC +
Preference number: 5 (lower is better)
Translates to: PMASCSLPHQLFSNV*CCRGFSTRIKTELD
Trigger: GTCTAACTCGGTCTTGATCCTTGTGCTAAATCCACGGCAGCATCAGACGTTGCTGAATAGCTGGTGCGGGAGGCTGCAGCTGGCCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488964.5
CDS-3UTR CAA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCCGTCTTCATCCATCTaGAGGCCACTCCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAPSSSI*RPLPQP
Trigger: CGGCTGCGGGAGTGGCCTCAAGATGGATGAAGACGG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGCGTTCTGCCGTGGGCTaGTCACGCACGTTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVRSAVG*SRTLWL
Trigger: CAACCACAACGTGCGTGACAAGCCCACGGCAGAACG...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCTCAGTCTTACAGGCCTaGATGACCTGCCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGSVLQA*MTCPLW
Trigger: CCACAAAGGGCAGGTCATCAAGGCCTGTAAGACTGA...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp CCGTCTGTGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCCTGCTGATACTGGCTTaGATGGATTTCATCCACTCC +
Preference number: 5 (lower is better)
Translates to: PSVESVPCLLWRQRKLLSLLILA*MDFIHS
Trigger: GGAGTGGATGAAATCCATCAAAGCCAGTATCAGCAG...GGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCACAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp CCAGTTCCACCACCGGCGTCTATCTGGGTTCTCTACGTGCCGGGCCTCTGCACCACAAAGTCTGAGGTTTaGTCTCTGGACTGGGCATTT +
Preference number: 5 (lower is better)
Translates to: PVPPPASIWVLYVPGLCTTKSEV*SLDWAF
Trigger: AAATGCCCAGTCCAGAGACAAAACCTCAGACTTTGT...GGTGCAGAGGCCCGGCACGTAGAGAACCCAGATAGACGCCGGTGGTGGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp ACAACCTCCCAGGCGGGCGTGGAGTTTGACCAGTTCCACCACCGGCGTCTATCTCCCAAAGACACAAAGTaGCTGCTTATCTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: TTSQAGVEFDQFHHRRLSPKDTK*LLIWVQ
Trigger: CTGGACCCAGATAAGCAGCAACTTTGTGTCTTTGGG...AGATAGACGCCGGTGGTGGAACTGGTCAAACTCCACGCCCGCCTGGGAGGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS GCA 90 bp ATTCTTATATGTTGCGAACTCTCAGCGCACTGTTCAGCCCCAGGCTaGGCTGTGAGCACAACATCACGAGGGTCCCACAAAAACGCTGCC +
Preference number: 5 (lower is better)
Translates to: ILICCELSAHCSAPG*AVSTTSRGSHKNAA
Trigger: GGCAGCGTTTTTGTGGGACCCTCGTGATGTTGTGCTCACAGCGCAGCCTGGGGCTGAACAGTGCGCTGAGAGTTCGCAACATATAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS-3UTR CAA 90 bp CTGGACTGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCTCAGTCTTACAGGCCTaGATGACCTGCCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: LDWAFCTGVQMPSRGCRFSVLQA*MTCPLW
Trigger: CCACAAAGGGCAGGTCATCAAGGCCTGTAAGACTGA...GAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCTCCTTCGTTTCCTCGTaGCCAACATGTCATAGAAGG +
Preference number: 5 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGSFVSS*PTCHRR
Trigger: CCTTCTATGACATGTTGGCAACGAGGAAACGAAGGA...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACCACGGCACGAGGCCTaGGGGATACCACCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: FYLVNTVSARALTAIHPPPRHEA*GIPPGP
Trigger: TGGCCCAGGTGGTATCCCCAAGGCCTCGTGCCGTGG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCCAGCAAAGGGGGAGCTaGATCATCTGGCGACTCCTT +
Preference number: 5 (lower is better)
Translates to: AHSQMTAKGELDHLATPSQQRGS*IIWRLL
Trigger: AAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTG...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TGGAATCCGTCCCGTGTCTGCTGTGGAGACAGCGGAAGCTGCTGTCCTGGCTTCTATCTTTGGCCAGAGTaGGGACTAACAATTCAAGCC +
Preference number: 5 (lower is better)
Translates to: WNPSRVCCGDSGSCCPGFYLWPE*GLTIQA
Trigger: GGCTTGAATTGTTAGTCCCAACTCTGGCCAAAGATA...GAAGCCAGGACAGCAGCTTCCGCTGTCTCCACAGCAGACACGGGACGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAACAGGGTCCTGGGGACGCTATCTTTGGCCAGAGTaGGGACTAACAATTCAAGCC +
Preference number: 5 (lower is better)
Translates to: EKPATNPTAHCVTGSWGRYLWPE*GLTIQA
Trigger: GGCTTGAATTGTTAGTCCCAACTCTGGCCAAAGATA...GCGTCCCCAGGACCCTGTTACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCGTCTTTCTGCTGGGGTaGGGTCTTTTACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: AHSQMTAKGELDHLATPSVFLLG*GLLPGS
Trigger: AGACCCAGGTAAAAGACCCAACCCCAGCAGAAAGAC...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCTCTGGACTGGGCATTTaGCACAGGAGTACAGATGCC +
Preference number: 5 (lower is better)
Translates to: AHSQMTAKGELDHLATPSSGLGI*HRSTDA
Trigger: GGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAGA...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTGACTGGAGGCCAGAGTaGCATATCTACCAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GLVRRRKQLVRAQHADRADWRPE*HIYQSG
Trigger: GCCTGACTGGTAGATATGCAACTCTGGCCTCCAGTC...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCACCGTCTTCATCCATCTaGAGGCCACTCCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: FYLVNTVSARALTAIHPPPSSSI*RPLPQP
Trigger: CGGCTGCGGGAGTGGCCTCAAGATGGATGAAGACGG...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp CTGCCCCGAGTGAATGCGTTTGGCATGGTACGAATGAGGCTCCCGTCTGTGGAATCTACGGAAGTTAGATaGTCGATCTCTGTCATCACC +
Preference number: 5 (lower is better)
Translates to: LPRVNAFGMVRMRLPSVESTEVR*SISVIT
Trigger: GGTGATGACAGAGATCGACAATCTAACTTCCGTAGA...TTCCACAGACGGGAGCCTCATTCGTACCATGCCAAACGCATTCACTCGGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TGGGCATTTTGCACAGGAGTACAGATGCCCTCCAGAGGGTGCAGATTCAAGGTGGAAGAAGGAAACAGCTaGTCCGAGCACAACATGCTG +
Preference number: 5 (lower is better)
Translates to: WAFCTGVQMPSRGCRFKVEEGNS*SEHNML
Trigger: CAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTC...CACCTTGAATCTGCACCCTCTGGAGGGCATCTGTACTCCTGTGCAAAATGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCAGGTCACACCTGGGTaGGTCAGAAGAAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: GLVRRRKQLVRAQHADRAQVTPG*VRRRKQ
Trigger: CTGTTTCCTTCTTCTGACCAACCCAGGTGTGACCTG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCTCATTCACAGATGACAGCAAAGGGGGAGCTTGATCATCTGGCGACTCCTTCCGCTAGGCGATTTCCTTaGACCACAAAGTACCTGGAG +
Preference number: 5 (lower is better)
Translates to: AHSQMTAKGELDHLATPSARRFP*TTKYLE
Trigger: CTCCAGGTACTTTGTGGTCAAAGGAAATCGCCTAGC...GGAAGGAGTCGCCAGATGATCAAGCTCCCCCTTTGCTGTCATCTGTGAATGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp TCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGTTTTCTACGGAAGTTAGATaGTCGATCTCTGTCATCACC +
Preference number: 5 (lower is better)
Translates to: SYPYIHSNLTTSQAGVEFSTEVR*SISVIT
Trigger: GGTGATGACAGAGATCGACAATCTAACTTCCGTAGA...AAACTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCAGTCACTGACCCAGAGTTTTCTGGACCAGGCCTGCCTCAAGGATCAGCAGGCGTGCACAGTATATACTaGTGTCCAGGAGTTAACTTT +
Preference number: 5 (lower is better)
Translates to: AVTDPEFSGPGLPQGSAGVHSIY*CPGVNF
Trigger: AAAGTTAACTCCTGGACACAAGTATATACTGTGCAC...GCCTGCTGATCCTTGAGGCAGGCCTGGTCCAGAAAACTCTGGGTCAGTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GGGTTGGTCAGAAGAAGGAAACAGCTTGTCCGAGCACAACATGCTGACAGAGCTCTGCTGATACTGGCTTaGATGGATTTCATCCACTCC +
Preference number: 5 (lower is better)
Translates to: GLVRRRKQLVRAQHADRALLILA*MDFIHS
Trigger: GGAGTGGATGAAATCCATCAAAGCCAGTATCAGCAG...AGCTCTGTCAGCATGTTGTGCTCGGACAAGCTGTTTCCTTCTTCTGACCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp ACCTCCTATCCTTACATCCACAGCAACCTGACAACCTCCCAGGCGGGCGTGGAGGGAGTATATACATCATaGAATAACAGACACTCCAGA +
Preference number: 5 (lower is better)
Translates to: TSYPYIHSNLTTSQAGVEGVYTS*NNRHSR
Trigger: TCTGGAGTGTCTGTTATTCAATGATGTATATACTCC...CTCCACGCCCGCCTGGGAGGTTGTCAGGTTGCTGTGGATGTAAGGATAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS TCA 90 bp GCAAACAGTCCACGTAAACGAGAACAAGGTATGAAGCCGAAGATTTaGGAAGATGACGAGGTGCGGCCTGATTTTCTTAGTCCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: ANSPRKREQGMKPKI*EDDEVRPDFLSPRA
Trigger: GGCCCTTGGACTAAGAAAATCAGGCCGCACCTCGTCATCTTCTCAAATCTTCGGCTTCATACCTTGTTCTCGTTTACGTGGACTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS GCA 90 bp ATGTACAGCTTCCAGAAACGCAATCTGATAAGCCTGAACTGCGGCTaGAGGATTCTTATATGTTGCGAACTCTCAGCGCACTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: MYSFQKRNLISLNCG*RILICCELSAHCSA
Trigger: GGCTGAACAGTGCGCTGAGAGTTCGCAACATATAAGAATCCTGCAGCCGCAGTTCAGGCTTATCAGATTGCGTTTCTGGAAGCTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS GCA 90 bp CTCTGGATGTACAGCTTCCAGAAACGCAATCTGATAAGCCTGAACTaGGGCTGCAGGATTCTTATATGTTGCGAACTCTCAGCGCACTGT +
Preference number: 5 (lower is better)
Translates to: LWMYSFQKRNLISLN*GCRILICCELSAHC
Trigger: ACAGTGCGCTGAGAGTTCGCAACATATAAGAATCCTGCAGCCGCAGTTCAGGCTTATCAGATTGCGTTTCTGGAAGCTGTACATCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS-3UTR CAA 90 bp TACCACAGACCTAACTTCTCAGCAAAGCATATCTATGTAGATATCTGCGTTTGTCAGATCCAGCCTTCCTaGAGCGGAGCACTGGGCACC +
Preference number: 5 (lower is better)
Translates to: YHRPNFSAKHIYVDICVCQIQPS*SGALGT
Trigger: GGTGCCCAGTGCTCCGCTCAAGGAAGGCTGGATCTG...ACAAACGCAGATATCTACATAGATATGCTTTGCTGAGAAGTTAGGTCTGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS TCA 90 bp ACAAAAACGCTGCCAACATTGCAGTCTGCAGTTGAGGTAAGGCCATaGGCAAACAGTCCACGTAAACGAGAACAAGGTATGAAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: TKTLPTLQSAVEVRP*ANSPRKREQGMKPK
Trigger: CTTCGGCTTCATACCTTGTTCTCGTTTACGTGGACTGTTTGCTCATGGCCTTACCTCAACTGCAGACTGCAATGTTGGCAGCGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS-3UTR CAA 90 bp TTTTATTTAGTGAACACAGTATCTGCAAGAGCTCTGACAGCCATCCACCCTCCATCTGGACTGGGCATTTaGCACAGGAGTACAGATGCC +
Preference number: 5 (lower is better)
Translates to: FYLVNTVSARALTAIHPPSGLGI*HRSTDA
Trigger: GGCATCTGTACTCCTGTGCAAAATGCCCAGTCCAGA...TGGAGGGTGGATGGCTGTCAGAGCTCTTGCAGATACTGTGTTCACTAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTAGTGCACAGTATATACTaGTGTCCAGGAGTTAACTTT +
Preference number: 5 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVVHSIY*CPGVNF
Trigger: AAAGTTAACTCCTGGACACAAGTATATACTGTGCAC...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp AAGAGGAAGTCCATAGAGGAAAAGCCAGCCACCAACCCAACAGCCCACTGTGTATTCAAGAACGCTGACTaGCCTTTCTCAGAACTAAAA +
Preference number: 5 (lower is better)
Translates to: KRKSIEEKPATNPTAHCVFKNAD*PFSELK
Trigger: TTTTAGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAA...TACACAGTGGGCTGTTGGGTTGGTGGCTGGCTTTTCCTCTATGGACTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCAAGGCTTGTACAAGGTaGAGATCAGCAAACTCATGG +
Preference number: 5 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRKACTR*RSANSW
Trigger: CCATGAGTTTGCTGATCTCAACCTTGTACAAGCCTT...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp ATAGCGATGAATATGGTCAAAAGCCGGTCTAACCTGCTGACCTGTATGAAACGCTTCAAGAACGCTGACTaGCCTTTCTCAGAACTAAAA +
Preference number: 5 (lower is better)
Translates to: IAMNMVKSRSNLLTCMKRFKNAD*PFSELK
Trigger: TTTTAGTTCTGAGAAAGGCAAGTCAGCGTTCTTGAA...GCGTTTCATACAGGTCAGCAGGTTAGACCGGCTTTTGACCATATTCATCGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS-3UTR CAA 90 bp GCATCTAAACAAAACATCAGCAGTTTCACGTGGCTCAGCGTATGGACCATCTGTGGAGTATATACATCATaGAATAACAGACACTCCAGA +
Preference number: 5 (lower is better)
Translates to: ASKQNISSFTWLSVWTICGVYTS*NNRHSR
Trigger: TCTGGAGTGTCTGTTATTCAATGATGTATATACTCC...ACAGATGGTCCATACGCTGAGCCACGTGAAACTGCTGATGTTTTGTTTAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350796.8
ENST00000396741.3
CDS GCA 72 bp CCGCGGGCGCTGCGGCCGCTCACAGCGAAGAGATCCTaGAGACGGCAGCGGCCGCGGGCCGGGGAGCTCACC +
Preference number: 6 (lower is better)
Translates to: PRALRPLTAKRS*RRQRPRAGELT
Trigger: GGTGAGCTCCCCGGCCCGCGGCCGCTGCCGTCTGCAGGATCTCTTCGCTGTGAGCGGCCGCAGCGCCCGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495176.5
CDS GCA 72 bp TGGGACCCCGCGTGCTGGGGGCCCGCCTGCAAGAGGTaGCCGGCCCACAGGTCGTCCTCGCTCAGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: WDPACWGPACKR*PAHRSSSLREG
Trigger: GCCTTCCCTGAGCGAGGACGACCTGTGGGCCGGGCACCTCTTGCAGGCGGGCCCCCAGCACGCGGGGTCCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466543.1
ENST00000478541.1
CDS CAA 72 bp ACGCCACCACCCTCGCCGCCGCCGTCTTCATCCATCTaGAGGCCACTCCCGCAGCCGGCGAGCCGGGGGCCG +
Preference number: 6 (lower is better)
Translates to: TPPPSPPPSSSI*RPLPQPASRGP
Trigger: CGGCCCCCGGCTCGCCGGCTGCGGGAGTGGCCTCAAGATGGATGAAGACGGCGGCGGCGAGGGTGGTGGCGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350796.8
ENST00000396741.3
ENST00000482460.1
CDS GCA 72 bp AGTGGACAGTGGGACCCCGCGTGCTGGGGGCCCGCCTaGAAGAGGTGCCCGGCCCACAGGTCGTCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: SGQWDPACWGPA*KRCPAHRSSSL
Trigger: GAGCGAGGACGACCTGTGGGCCGGGCACCTCTTGCAGGCGGGCCCCCAGCACGCGGGGTCCCACTGTCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466543.1
ENST00000478541.1
CDS CCA 72 bp GCCAGAACCTCCAGTGGACAGTGGGACCCCGCGTGCTaGGGGCCCGCCTGCAAGAGGTGCCCGGCCCACAGG +
Preference number: 6 (lower is better)
Translates to: ARTSSGQWDPAC*GPACKRCPAHR
Trigger: CCTGTGGGCCGGGCACCTCTTGCAGGCGGGCCCCCAGCACGCGGGGTCCCACTGTCCACTGGAGGTTCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466543.1
CDS GCA 72 bp TCAGCCAGAACCTCCAGTGGACAGTGGGACCCCGCGTaGTGGGGGCCCGCCTGCAAGAGGTGCCCGGCCCAC +
Preference number: 6 (lower is better)
Translates to: SARTSSGQWDPA*WGPACKRCPAH
Trigger: GTGGGCCGGGCACCTCTTGCAGGCGGGCCCCCAGCACGCGGGGTCCCACTGTCCACTGGAGGTTCTGGCTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466543.1
CDS TCA 72 bp GAGGTGCGGCCTGATTTTCTTAGTCCAAGGGCCGGCTaGGGCGACTCCCACCAGAAGCCCTGCCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: EVRPDFLSPRAG*GDSHQKPCLLS
Trigger: GGAGAGGAGGCAGGGCTTCTGGTGGGAGTCGCCTCAGCCGGCCCTTGGACTAAGAAAATCAGGCCGCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS CCA 72 bp AACAGCAGCCAGTTCAGAGACTCGGAGGAAAATGGCTaGCCGGGCAGAAAGCTCAGCGGGACCAGGGCGGCA +
Preference number: 6 (lower is better)
Translates to: NSSQFRDSEENG*PGRKLSGTRAA
Trigger: TGCCGCCCTGGTCCCGCTGAGCTTTCTGCCCGGCCAGCCATTTTCCTCCGAGTCTCTGAACTGGCTGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495176.5
CDS CCA 72 bp GGAAAACAGCAGCCAGTTCAGAGACTCGGAGGAAAATaGCTGGCCGGGCAGAAAGCTCAGCGGGACCAGGGC +
Preference number: 6 (lower is better)
Translates to: GKQQPVQRLGGK*LAGQKAQRDQG
Trigger: GCCCTGGTCCCGCTGAGCTTTCTGCCCGGCCAGCCATTTTCCTCCGAGTCTCTGAACTGGCTGCTGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495176.5
CDS TCA 72 bp TCATGCGATCAATCTTCTGCGCCTCCCCGGGCAGCCTaGAGCTCCATAAGAACTGCCAGGCCTGCACCCTTC +
Preference number: 6 (lower is better)
Translates to: SCDQSSAPPRAA*SSIRTARPAPF
Trigger: GAAGGGTGCAGGCCTGGCAGTTCTTATGGAGCTTCAGGCTGCCCGGGGAGGCGCAGAAGATTGATCGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS GCA 72 bp TGTTGCGAACTCTCAGCGCACTGTTCAGCCCCAGGCTaGGCTGTGAGCACAACATCACGAGGGTCCCACAAA +
Preference number: 6 (lower is better)
Translates to: CCELSAHCSAPG*AVSTTSRGSHK
Trigger: TTTGTGGGACCCTCGTGATGTTGTGCTCACAGCGCAGCCTGGGGCTGAACAGTGCGCTGAGAGTTCGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS TCA 72 bp AGCTGCAGCCTCCCGCACCAGCTATTCAGCAACGTCTaGTGCTGCCGTGGATTTAGCACAAGGATCAAGACC +
Preference number: 6 (lower is better)
Translates to: SCSLPHQLFSNV*CCRGFSTRIKT
Trigger: GGTCTTGATCCTTGTGCTAAATCCACGGCAGCATCAGACGTTGCTGAATAGCTGGTGCGGGAGGCTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488964.5
CDS GCA 72 bp ATAAGCCTGAACTGCGGCTGCAGGATTCTTATATGTTaGGAACTCTCAGCGCACTGTTCAGCCCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: ISLNCGCRILIC*ELSAHCSAPGC
Trigger: GCAGCCTGGGGCTGAACAGTGCGCTGAGAGTTCGCAACATATAAGAATCCTGCAGCCGCAGTTCAGGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS CAA 72 bp GATAAGCCTGAACTGCGGCTGCAGGATTCTTATATGTaGCGAACTCTCAGCGCACTGTTCAGCCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: DKPELRLQDSYM*RTLSALFSPRL
Trigger: CAGCCTGGGGCTGAACAGTGCGCTGAGAGTTCGCAACATATAAGAATCCTGCAGCCGCAGTTCAGGCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS TCA 72 bp TCATGCGATCAATCTTCTGCGCCTCCCCGGGCAGCCTaGAGCTCCATAAGAACTGCCTTAAGGCTTGTACAA +
Preference number: 6 (lower is better)
Translates to: SCDQSSAPPRAA*SSIRTALRLVQ
Trigger: TTGTACAAGCCTTAAGGCAGTTCTTATGGAGCTTCAGGCTGCCCGGGGAGGCGCAGAAGATTGATCGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350796.8
ENST00000396741.3
ENST00000478541.1
CDS TCA 72 bp CATGAGCAAACAGTCCACGTAAACGAGAACAAGGTATaGAGCCGAAGATTTGAGAAGATGACGAGGTGCGGC +
Preference number: 6 (lower is better)
Translates to: HEQTVHVNENKV*SRRFEKMTRCG
Trigger: GCCGCACCTCGTCATCTTCTCAAATCTTCGGCTTCATACCTTGTTCTCGTTTACGTGGACTGTTTGCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS TCA 72 bp CTGCCAACATTGCAGTCTGCAGTTGAGGTAAGGCCATaGGCAAACAGTCCACGTAAACGAGAACAAGGTATG +
Preference number: 6 (lower is better)
Translates to: LPTLQSAVEVRP*ANSPRKREQGM
Trigger: CATACCTTGTTCTCGTTTACGTGGACTGTTTGCTCATGGCCTTACCTCAACTGCAGACTGCAATGTTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS GCA 72 bp TTCCAGAAACGCAATCTGATAAGCCTGAACTGCGGCTaGAGGATTCTTATATGTTGCGAACTCTCAGCGCAC +
Preference number: 6 (lower is better)
Translates to: FQKRNLISLNCG*RILICCELSAH
Trigger: GTGCGCTGAGAGTTCGCAACATATAAGAATCCTGCAGCCGCAGTTCAGGCTTATCAGATTGCGTTTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS TCA 72 bp CCACGTAAACGAGAACAAGGTATGAAGCCGAAGATTTaGGAAGATGACGAGGTGCGGCCTGATTTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: PRKREQGMKPKI*EDDEVRPDFLS
Trigger: ACTAAGAAAATCAGGCCGCACCTCGTCATCTTCTCAAATCTTCGGCTTCATACCTTGTTCTCGTTTACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS GCA 72 bp TACAGCTTCCAGAAACGCAATCTGATAAGCCTGAACTaGGGCTGCAGGATTCTTATATGTTGCGAACTCTCA +
Preference number: 6 (lower is better)
Translates to: YSFQKRNLISLN*GCRILICCELS
Trigger: TGAGAGTTCGCAACATATAAGAATCCTGCAGCCGCAGTTCAGGCTTATCAGATTGCGTTTCTGGAAGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481329.1
ENST00000491641.5
CDS TCA 72 bp AGCTCCATAAGAACTGCCTTAAGGCTTGTACAAGGTTaGGATCAGCAAACTCATGGAGTTCAACAAAGGCTT +
Preference number: 6 (lower is better)
Translates to: SSIRTALRLVQG*DQQTHGVQQRL
Trigger: AAGCCTTTGTTGAACTCCATGAGTTTGCTGATCTCAACCTTGTACAAGCCTTAAGGCAGTTCTTATGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350796.8
ENST00000396741.3
ENST00000478541.1
CDS CAA 72 bp AAGCTCCATAAGAACTGCCTTAAGGCTTGTACAAGGTaGAGATCAGCAAACTCATGGAGTTCAACAAAGGCT +
Preference number: 6 (lower is better)
Translates to: KLHKNCLKACTR*RSANSWSSTKA
Trigger: AGCCTTTGTTGAACTCCATGAGTTTGCTGATCTCAACCTTGTACAAGCCTTAAGGCAGTTCTTATGGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350796.8
ENST00000396741.3
ENST00000478541.1
CDS CAA 90 bp TTGTACAAGGTTGAGATCAGCAAACTCATGGAGTTCAACAAAGGCTaGAAGAACTTTAATATTAAATTCATCCCTTTCACCCAGGTAGTC +
Preference number: 6 (lower is better)
Translates to: LYKVEISKLMEFNKG*KNFNIKFIPFTQVV
Trigger: GACTACCTGGGTGAAAGGGATGAATTTAATATTAAAGTTCTTCAAGCCTTTGTTGAACTCCATGAGTTTGCTGATCTCAACCTTGTACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350796.8
ENST00000396741.3
ENST00000478541.1
CDS TCA 72 bp TTGAGATCAGCAAACTCATGGAGTTCAACAAAGGCTTaGAGAACTTTAATATTAAATTCATCCCTTTCACCC +
Preference number: 6 (lower is better)
Translates to: LRSANSWSSTKA*RTLILNSSLSP
Trigger: GGGTGAAAGGGATGAATTTAATATTAAAGTTCTTCAAGCCTTTGTTGAACTCCATGAGTTTGCTGATCTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350796.8
ENST00000396741.3
ENST00000478541.1
CDS CAA 72 bp GTTGAGATCAGCAAACTCATGGAGTTCAACAAAGGCTaGAAGAACTTTAATATTAAATTCATCCCTTTCACC +
Preference number: 6 (lower is better)
Translates to: VEISKLMEFNKG*KNFNIKFIPFT
Trigger: GGTGAAAGGGATGAATTTAATATTAAAGTTCTTCAAGCCTTTGTTGAACTCCATGAGTTTGCTGATCTCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350796.8
ENST00000396741.3
ENST00000478541.1