RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP4F3 (Homo sapiens)

Ensembl gene IDs: ENSG00000186529

Ensembl transcript IDs: ENST00000221307.13, ENST00000585846.1, ENST00000586182.6, ENST00000591058.5

Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTaGCTAGGGCAGAGACTTACTTTGAAAATTACTTCTGTGGTAGGA +
Preference number: 1 (lower is better)
Translates to: KSCLLTLEWSPGDLM*LGQRLTLKITSVVG
Trigger: TCCTACCACAGAAGTAATTTTCAAAGTAAGTCTCTGCCCTAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR CCA 90 bp CAAATAGGCACAGGAAGGCACGAGTGGTTCAACACCCTTAGTCACTaGAAAATGCGAATTAAAATCTCAGGGATATGCCACAGCATACCC +
Preference number: 1 (lower is better)
Translates to: QIGTGRHEWFNTLSH*KMRIKISGICHSIP
Trigger: GGGTATGCTGTGGCATATCCCTGAGATTTTAATTCGCATTTTCCAGTGACTAAGGGTGTTGAACCACTCGTGCCTTCCTGTGCCTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR CCA 90 bp CCACAGCTGCTGAAAGCCACCAATCCACTATACATCTCTTCAGATTaGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTG +
Preference number: 1 (lower is better)
Translates to: PQLLKATNPLYISSD*PVLEISYKRTVHYV
Trigger: CACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR TCA 90 bp GAAATTTCATATAAAAGGACAGTACACTATGTGACCTTTTGCATCTaGTGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGT +
Preference number: 1 (lower is better)
Translates to: EISYKRTVHYVTFCI*CLSFSIMHSRFIHS
Trigger: ACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTCACATAGTGTACTGTCCTTTTATATGAAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR TCA 90 bp ATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTaGCCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAA +
Preference number: 1 (lower is better)
Translates to: IGLFWKFHIKGQYTM*PFASDVFHSVSCIQ
Trigger: TTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTCACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR-3UTR GCA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTAGCACTCACAGTGTCGTaGTACCTTCATCACTATCTA +
Preference number: 2 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLALTVS*YLHHYL
Trigger: TAGATAGTGATGAAGGTAGCACGACACTGTGAGTGC...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR-3UTR TCA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTAGTGACCTTTTGCATCTaGTGTCTTTCATTCAGTATC +
Preference number: 2 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLVTFCI*CLSFSI
Trigger: GATACTGAATGAAAGACATCAGATGCAAAAGGTCAC...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR-3UTR GCA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCATGTAGTGGGGATCACTaGTTCATTCCTTTTTATGGC +
Preference number: 2 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPCSGDH*FIPFYG
Trigger: GCCATAAAAAGGAATGAAGCAGTGATCCCCACTACA...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
3UTR-3UTR GCA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAATGTAGTGGGGATCACTaGTTCATTCCTTTTTATGGC +
Preference number: 2 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKCSGDH*FIPFYG
Trigger: GCCATAAAAAGGAATGAAGCAGTGATCCCCACTACA...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR-3UTR CCA 90 bp AACAGACACTTCACCAAAGAAAATATAGGAGTGTCAAATAGGCACAGGAAGGCACTCATACGTTACTTATaGAAATTAAACACGATGCAG +
Preference number: 2 (lower is better)
Translates to: NRHFTKENIGVSNRHRKALIRYL*KLNTMQ
Trigger: CTGCATCGTGTTTAATTTCCATAAGTAACGTATGAG...TGCCTTCCTGTGCCTATTTGACACTCCTATATTTTCTTTGGTGAAGTGTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR-3UTR CCA 90 bp AACAGACACTTCACCAAAGAAAATATAGGAGTGTCAAATAGGCACAGGAAGGCAAACACCCTTAGTCACTaGAAAATGCGAATTAAAATC +
Preference number: 2 (lower is better)
Translates to: NRHFTKENIGVSNRHRKANTLSH*KMRIKI
Trigger: GATTTTAATTCGCATTTTCCAGTGACTAAGGGTGTT...TGCCTTCCTGTGCCTATTTGACACTCCTATATTTTCTTTGGTGAAGTGTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR-3UTR TCA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGGTGACCTTTTGCATCTaGTGTCTTTCATTCAGTATC +
Preference number: 2 (lower is better)
Translates to: NPLYISSDWPVLEISYKRVTFCI*CLSFSI
Trigger: GATACTGAATGAAAGACATCAGATGCAAAAGGTCAC...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR CCA 72 bp GCACCCCTGTCAAAGTCTTGTCTACTCACTCTGGAGTaGTCCCCAGGTGATCTGATGTGCCTAGGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: APLSKSCLLTLE*SPGDLMCLGQR
Trigger: TCTCTGCCCTAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGACAGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR TCA 72 bp AGCAGTCGCTCCTCAGTCCCACCTCCCCACAGCTGCTaGAAGCCACCAATCCACTATACATCTCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: SSRSSVPPPHSC*KPPIHYTSLQI
Trigger: AATCTGAAGAGATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGCGACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR-3UTR CAA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTACCACTCAGAGTGACCTaGAGCAAGAGAGTTAACGTC +
Preference number: 3 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLPLRVT*SKRVNV
Trigger: GACGTTAACTCTCTTGCTCAAGGTCACTCTGAGTGG...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR TCA 72 bp AAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTaGTCTGATGTGCCTAGGGCAGAGACTTACTTTGAA +
Preference number: 3 (lower is better)
Translates to: KVLSTHSGVVPR*SDVPRAETYFE
Trigger: TTCAAAGTAAGTCTCTGCCCTAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR-3UTR CAA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATACACTATGTGACCTTTaGCATCTGATGTCTTTCATT +
Preference number: 3 (lower is better)
Translates to: APQSHLPTAAESHQSTIHTLCDL*HLMSFI
Trigger: AATGAAAGACATCAGATGCAAAAGGTCACATAGTGT...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR GCA 72 bp CTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTaGCTAGGGCAGAGACTTACTTTGAAAATTACTTCT +
Preference number: 3 (lower is better)
Translates to: LLTLEWSPGDLM*LGQRLTLKITS
Trigger: AGAAGTAATTTTCAAAGTAAGTCTCTGCCCTAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR CCA 72 bp ACAGGAAGGCACGAGTGGTTCAACACCCTTAGTCACTaGAAAATGCGAATTAAAATCTCAGGGATATGCCAC +
Preference number: 3 (lower is better)
Translates to: TGRHEWFNTLSH*KMRIKISGICH
Trigger: GTGGCATATCCCTGAGATTTTAATTCGCATTTTCCAGTGACTAAGGGTGTTGAACCACTCGTGCCTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR-3UTR CAA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTATGGATGGACCATATTTaGTTTATCCTTTCATCTGGT +
Preference number: 3 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLWMDHI*FILSSG
Trigger: ACCAGATGAAAGGATAAACAAAATATGGTCCATCCA...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR-3UTR CAA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTACTGTGTAATACTCCATaGTATGGATGGACCATATTT +
Preference number: 3 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLLCNTP*YGWTIF
Trigger: AAATATGGTCCATCCATACAATGGAGTATTACACAG...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR-3UTR CAA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGACAGTGTCTGTGGAGTTaGCAGGGCATGCCTGTTCTA +
Preference number: 3 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRQCLWS*QGMPVL
Trigger: TAGAACAGGCATGCCCTGCAAACTCCACAGACACTG...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR-3UTR CAA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGACCACTCAGAGTGACCTaGAGCAAGAGAGTTAACGTC +
Preference number: 3 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRPLRVT*SKRVNV
Trigger: GACGTTAACTCTCTTGCTCAAGGTCACTCTGAGTGG...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR GCA 72 bp TCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGTaGTACCTTCATCACTATCTAGGTCCGGAACATTTT +
Preference number: 3 (lower is better)
Translates to: SNSIAFSALTVS*YLHHYLGPEHF
Trigger: AAAATGTTCCGGACCTAGATAGTGATGAAGGTAGCACGACACTGTGAGTGCACTAAATGCTATTGAATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR-3UTR CAA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTTGGATGGACCATATTTaGTTTATCCTTTCATCTGGT +
Preference number: 3 (lower is better)
Translates to: SRFIHSVVGITASFLFMAWMDHI*FILSSG
Trigger: ACCAGATGAAAGGATAAACAAAATATGGTCCATCCA...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
3UTR GCA 72 bp AGTCACTGGAAAATGCGAATTAAAATCTCAGGGATATaGCACAGCATACCCATAAGGAAGGCTGAAACAAAA +
Preference number: 3 (lower is better)
Translates to: SHWKMRIKISGI*HSIPIRKAETK
Trigger: TTTTGTTTCAGCCTTCCTTATGGGTATGCTGTGGCATATCCCTGAGATTTTAATTCGCATTTTCCAGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR-3UTR CAA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGACACTATGTGACCTTTaGCATCTGATGTCTTTCATT +
Preference number: 3 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSTLCDL*HLMSFI
Trigger: AATGAAAGACATCAGATGCAAAAGGTCACATAGTGT...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR-3UTR CAA 90 bp GATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGACCTTTTGGATGGACCATATTTaGTTTATCCTTTCATCTGGT +
Preference number: 3 (lower is better)
Translates to: DWPVLEISYKRTVHYVTFWMDHI*FILSSG
Trigger: ACCAGATGAAAGGATAAACAAAATATGGTCCATCCA...AAAGGTCACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR-3UTR CAA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGTGGATGGACCATATTTaGTTTATCCTTTCATCTGGT +
Preference number: 3 (lower is better)
Translates to: NPLYISSDWPVLEISYKRWMDHI*FILSSG
Trigger: ACCAGATGAAAGGATAAACAAAATATGGTCCATCCA...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR TCA 72 bp TATAAAAGGACAGTACACTATGTGACCTTTTGCATCTaGTGTCTTTCATTCAGTATCATGCATTCAAGGTTC +
Preference number: 3 (lower is better)
Translates to: YKRTVHYVTFCI*CLSFSIMHSRF
Trigger: GAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTCACATAGTGTACTGTCCTTTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGCCTGCTCCGTGGGGGTaGCCAGGCCCAGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: RFIHSVVGITASFLFMAVPAPWG*PGPGDP
Trigger: TGGGTCACCTGGGCCTGGTCACCCCCACGGAGCAGG...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATGCACAATGTCTTGGGTaGAGCAGCGAGAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: APQSHLPTAAESHQSTIHAQCLG*SSERRQ
Trigger: CTGCCGTCTCTCGCTGCTGCACCCAAGACATTGTGC...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp CATCACTATCTAGGTCCGGAACATTTTCACCATCCCAGGAGGAAACCCCATCCTAGGACCCTCATGCCCTaGTCCGTGGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: HHYLGPEHFHHPRRKPHPRTLMP*SVGVTR
Trigger: CCTGGTCACCCCCACGGAGCAGGGCATGAGGGTCCT...AGGATGGGGTTTCCTCCTGGGATGGTGAAAATGTTCCGGACCTAGATAGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTCCTGCTCCGTGGGGGTaGCCAGGCCCAGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: SRFIHSVVGITASFLFMAPAPWG*PGPGDP
Trigger: TGGGTCACCTGGGCCTGGTCACCCCCACGGAGCAGG...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATCACACGGCTGGGTTGTaGTGGGTTCCAAAAACACTG +
Preference number: 4 (lower is better)
Translates to: APQSHLPTAAESHQSTIHHTAGL*WVPKTL
Trigger: CAGTGTTTTTGGAACCCATCACAACCCAGCCGTGTG...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp CATCACTATCTAGGTCCGGAACATTTTCACCATCCCAGGAGGAAACCCCATCCTGGAGTGGTCCCCAGGTaGTCTGATGTGCCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: HHYLGPEHFHHPRRKPHPGVVPR*SDVPRA
Trigger: TGCCCTAGGCACATCAGATCACCTGGGGACCACTCC...AGGATGGGGTTTCCTCCTGGGATGGTGAAAATGTTCCGGACCTAGATAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR GCA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGAGGACCCTCATGCCCTaGTCCGTGGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RFIHSVVGITASFLFMAVRTLMP*SVGVTR
Trigger: CCTGGTCACCCCCACGGAGCAGGGCATGAGGGTCCT...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGGAGCAGCCACGGGGATaGTGCCATTGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: RFIHSVVGITASFLFMAVEQPRG*CHWPKA
Trigger: GGCCTTTGGCCAATGGCAGCATCCCCGTGGCTGCTC...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATAGGTGTGAGCTACCGTaGCCTGCCAAGGATATTCTT +
Preference number: 4 (lower is better)
Translates to: APQSHLPTAAESHQSTIHRCELP*PAKDIL
Trigger: AAGAATATCCTTGGCAGGGCACGGTAGCTCACACCT...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATCGGCAATATATTCACTaGGCTTCTCCTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: APQSHLPTAAESHQSTIHRQYIH*ASPGNG
Trigger: GCCATTGCCAGGAGAAGCCCAGTGAATATATTGCCG...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACCTGCTCCGTGGGGGTaGCCAGGCCCAGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPPAPWG*PGPGDP
Trigger: TGGGTCACCTGGGCCTGGTCACCCCCACGGAGCAGG...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATTGTCCTTTGGTACAATaGCAGCTGGAGCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: APQSHLPTAAESHQSTIHCPLVQ*QLEQRA
Trigger: TGCTCTTTGCTCCAGCTGCCATTGTACCAAAGGACA...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGGCACAATGTCTTGGGTaGAGCAGCGAGAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: RFIHSVVGITASFLFMAVAQCLG*SSERRQ
Trigger: CTGCCGTCTCTCGCTGCTGCACCCAAGACATTGTGC...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGTGGTACAATGGCAGCTaGGGCGTTGATGACAGACCG +
Preference number: 4 (lower is better)
Translates to: RFIHSVVGITASFLFMAVWYNGS*GVDDRP
Trigger: CGGTCTGTCATCAACGCCTCAGCTGCCATTGTACCA...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGCACAATGTCTTGGGTaGAGCAGCGAGAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: SRFIHSVVGITASFLFMAAQCLG*SSERRQ
Trigger: CTGCCGTCTCTCGCTGCTGCACCCAAGACATTGTGC...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp CATCACTATCTAGGTCCGGAACATTTTCACCATCCCAGGAGGAAACCCCATCCTAACAGTCAGTGTCTGTaGAGTTTGCAGGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: HHYLGPEHFHHPRRKPHPNSQCL*SLQGMP
Trigger: AGGCATGCCCTGCAAACTCCACAGACACTGACTGTT...AGGATGGGGTTTCCTCCTGGGATGGTGAAAATGTTCCGGACCTAGATAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CCA 90 bp AAGGACAGTACACTATGTGACCTTTTGCATCTGATGTCTTTCATTCAGTATCATCCCCCTCCCCCAGGCTaGAGCGTAGTGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: KDSTLCDLLHLMSFIQYHPPPPG*SVVAPP
Trigger: AGGTGGTGCCACTACGCTCCAGCCTGGGGGAGGGGG...ATGATACTGAATGAAAGACATCAGATGCAAAAGGTCACATAGTGTACTGTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR TCA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGCACACGGCTGGGTTGTaGTGGGTTCCAAAAACACTG +
Preference number: 4 (lower is better)
Translates to: RFIHSVVGITASFLFMAVHTAGL*WVPKTL
Trigger: CAGTGTTTTTGGAACCCATCACAACCCAGCCGTGTG...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTTGGTACAATGGCAGCTaGGGCGTTGATGACAGACCG +
Preference number: 4 (lower is better)
Translates to: SRFIHSVVGITASFLFMAWYNGS*GVDDRP
Trigger: CGGTCTGTCATCAACGCCTCAGCTGCCATTGTACCA...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGGACAGGCTCAGCTGTaGCATCCTTGTCCCACACAA +
Preference number: 4 (lower is better)
Translates to: SRFIHSVVGITASFLFMAGQAQL*HPCPTQ
Trigger: TTGTGTGGGACAAGGATGCCACAGCTGAGCCTGTCC...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586182.6
CDS-3UTR GCA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGAGAGCAGCCACGGGGATaGTGCCATTGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQREQPRG*CHWPKA
Trigger: GGCCTTTGGCCAATGGCAGCATCCCCGTGGCTGCTC...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp CACTATTTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAAGGACCCTCATGCCCTaGTCCGTGGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: HYFNHSKVSNSIAFSALTRTLMP*SVGVTR
Trigger: CCTGGTCACCCCCACGGAGCAGGGCATGAGGGTCCT...TGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAAATAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp TTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTTCAGCTGTGGCATCCTaGAGGGCAGATGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LHLMSFIQYHAFKVHPQCSAVAS*RADGVV
Trigger: CACCACCCCATCTGCCCTGCAGGATGCCACAGCTGA...ACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585846.1
CDS-3UTR TCA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGAGGAGTGGTCCCCAGGTaGTCTGATGTGCCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRGVVPR*SDVPRA
Trigger: TGCCCTAGGCACATCAGATCACCTGGGGACCACTCC...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGGAGCAGCCACGGGGATaGTGCCATTGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: NPLYISSDWPVLEISYKREQPRG*CHWPKA
Trigger: GGCCTTTGGCCAATGGCAGCATCCCCGTGGCTGCTC...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCAGCACAATGTCTTGGGTaGAGCAGCGAGAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPAQCLG*SSERRQ
Trigger: CTGCCGTCTCTCGCTGCTGCACCCAAGACATTGTGC...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTCGGCAATATATTCACTaGGCTTCTCCTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: SRFIHSVVGITASFLFMARQYIH*ASPGNG
Trigger: GCCATTGCCAGGAGAAGCCCAGTGAATATATTGCCG...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGAAACCTCTGACTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SRFIHSVVGITASFLFMAETSDS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGTCAGAGGTTTC...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR TCA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGCCTCCCCACAGCTGCTaGAAGCCACCAATCCACTAT +
Preference number: 4 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSPPHSC*KPPIHY
Trigger: ATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGG...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp CACTATTTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAAGGTGGGGTGGAAGATaGGGACGATTGCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HYFNHSKVSNSIAFSALTRWGGR*GRLRAR
Trigger: CCTGGCACGCAATCGTCCGCATCTTCCACCCCACCT...TGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAAATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGTCTGAGGCCAGGAGCTaGCACTTGGCATGCATGATG +
Preference number: 4 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSSEARS*HLACMM
Trigger: CATCATGCATGCCAAGTGGCAGCTCCTGGCCTCAGA...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCATCTGAGGCCAGGAGCTaGCACTTGGCATGCATGATG +
Preference number: 4 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPSEARS*HLACMM
Trigger: CATCATGCATGCCAAGTGGCAGCTCCTGGCCTCAGA...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp TTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTTCTGAGGCCAGGAGCTaGCACTTGGCATGCATGATG +
Preference number: 4 (lower is better)
Translates to: LHLMSFIQYHAFKVHPQCSEARS*HLACMM
Trigger: CATCATGCATGCCAAGTGGCAGCTCCTGGCCTCAGA...ACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCAGCAGGAGGCGGAGGTTaGAGTGAACTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPAGGGG*SELRSC
Trigger: GCATGATCTCAGTTCACTGCAACCTCCGCCTCCTGC...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGAGGACAGGCTCAGCTGTaGCATCCTTCTGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRGQAQL*HPSVRS
Trigger: GCTCCTGACAGAAGGATGCCACAGCTGAGCCTGTCC...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAAGCCTCCCGAGTAGCTaGGATTACAGGCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKSLPSS*DYRPAP
Trigger: TGGTGCGGGCCTGTAATCCCAGCTACTCGGGAGGCT...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221307.13
3UTR CAA 72 bp CCAGGTGATCTGATGTGCCTAGGGCAGAGACTTACTTaGAAAATTACTTCTGTGGTAGGAAAAGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: PGDLMCLGQRLT*KITSVVGKVMA
Trigger: GGCCATGACTTTTCCTACCACAGAAGTAATTTTCAAAGTAAGTCTCTGCCCTAGGCACATCAGATCACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR TCA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGCACACGGCTGGGTTGTaGTGGGTTCCAAAAACACTG +
Preference number: 4 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSHTAGL*WVPKTL
Trigger: CAGTGTTTTTGGAACCCATCACAACCCAGCCGTGTG...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp TCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGCCTCCCCACAGCTGCTaGAAGCCACCAATCCACTAT +
Preference number: 4 (lower is better)
Translates to: SSDWPVLEISYKRTVHYVPPHSC*KPPIHY
Trigger: ATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGG...CACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp TTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTAAACTCCTGACCTCATaGTCTGCCCACCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: LHLMSFIQYHAFKVHPQCKLLTS*SAHLDL
Trigger: GAGGTCAAGGTGGGCAGATCATGAGGTCAGGAGTTT...ACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR TCA 90 bp TCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGCCATCCAAGCAGCTGTaGATACAGGCACACACCACC +
Preference number: 4 (lower is better)
Translates to: SSDWPVLEISYKRTVHYVPSKQL*IQAHTT
Trigger: GGTGGTGTGTGCCTGTATTCACAGCTGCTTGGATGG...CACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp GATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGACCTTTTCTGAGGCCAGGAGCTaGCACTTGGCATGCATGATG +
Preference number: 4 (lower is better)
Translates to: DWPVLEISYKRTVHYVTFSEARS*HLACMM
Trigger: CATCATGCATGCCAAGTGGCAGCTCCTGGCCTCAGA...AAAGGTCACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp CACTATTTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGGACAGGCTCAGCTGTaGCATCCTTCTGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HYFNHSKVSNSIAFSALTGQAQL*HPSVRS
Trigger: GCTCCTGACAGAAGGATGCCACAGCTGAGCCTGTCC...TGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAAATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
3UTR CAA 72 bp ACCAGATTTATCCCCACTCTTCCACTCAGAGTGACCTaGAGCAAGAGAGTTAACGTCCAGTCCATAAAATTG +
Preference number: 4 (lower is better)
Translates to: TRFIPTLPLRVT*SKRVNVQSIKL
Trigger: CAATTTTATGGACTGGACGTTAACTCTCTTGCTCAAGGTCACTCTGAGTGGAAGAGTGGGGATAAATCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR TCA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGGTGACCTTTTGCATCTaGTGTCTTTCATTCAGTATC +
Preference number: 4 (lower is better)
Translates to: RFIHSVVGITASFLFMAVVTFCI*CLSFSI
Trigger: GATACTGAATGAAAGACATCAGATGCAAAAGGTCAC...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAACCTCCCCACAGCTGCTaGAAGCCACCAATCCACTAT +
Preference number: 4 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKPPHSC*KPPIHY
Trigger: ATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGG...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTAGGAGAAAATCTCCATaGCCTCCAGTTAAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SRFIHSVVGITASFLFMARRKSP*PPVKQR
Trigger: TCTTTGCTTAACTGGAGGTCATGGAGATTTTCTCCT...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR TCA 90 bp CACTATTTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACATGGTACAATGGCAGCTaGGGCGTTGATGACAGACCG +
Preference number: 4 (lower is better)
Translates to: HYFNHSKVSNSIAFSALTWYNGS*GVDDRP
Trigger: CGGTCTGTCATCAACGCCTCAGCTGCCATTGTACCA...TGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAAATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp AACAGACACTTCACCAAAGAAAATATAGGAGTGTCAAATAGGCACAGGAAGGCAAGCTGCCACTTGGCATaGATGATGTTCACACTCTCA +
Preference number: 4 (lower is better)
Translates to: NRHFTKENIGVSNRHRKASCHLA*MMFTLS
Trigger: TGAGAGTGTGAACATCATGCATGCCAAGTGGCAGCT...TGCCTTCCTGTGCCTATTTGACACTCCTATATTTTCTTTGGTGAAGTGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp GATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGACCTTTTCACTGGGCTTCTCCTaGCAATGGCTGTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DWPVLEISYKRTVHYVTFSLGFS*QWLSKL
Trigger: CAGCTTTGACAGCCATTGCCAGGAGAAGCCCAGTGA...AAAGGTCACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACGGCAATATATTCACTaGGCTTCTCCTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPRQYIH*ASPGNG
Trigger: GCCATTGCCAGGAGAAGCCCAGTGAATATATTGCCG...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGCGGCAATATATTCACTaGGCTTCTCCTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSRQYIH*ASPGNG
Trigger: GCCATTGCCAGGAGAAGCCCAGTGAATATATTGCCG...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp AAGGACAGTACACTATGTGACCTTTTGCATCTGATGTCTTTCATTCAGTATCATCTTGTCTACTCACTCTaGAGTGGTCCCCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: KDSTLCDLLHLMSFIQYHLVYSL*SGPQVI
Trigger: GATCACCTGGGGACCACTCCAGAGTGAGTAGACAAG...ATGATACTGAATGAAAGACATCAGATGCAAAAGGTCACATAGTGTACTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CCA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTACTCATACGTTACTTATaGAAATTAAACACGATGCAG +
Preference number: 4 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLLIRYL*KLNTMQ
Trigger: CTGCATCGTGTTTAATTTCCATAAGTAACGTATGAG...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp CATCACTATCTAGGTCCGGAACATTTTCACCATCCCAGGAGGAAACCCCATCCTAACACCCTTAGTCACTaGAAAATGCGAATTAAAATC +
Preference number: 4 (lower is better)
Translates to: HHYLGPEHFHHPRRKPHPNTLSH*KMRIKI
Trigger: GATTTTAATTCGCATTTTCCAGTGACTAAGGGTGTT...AGGATGGGGTTTCCTCCTGGGATGGTGAAAATGTTCCGGACCTAGATAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR TCA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAACACACGGCTGGGTTGTaGTGGGTTCCAAAAACACTG +
Preference number: 4 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKHTAGL*WVPKTL
Trigger: CAGTGTTTTTGGAACCCATCACAACCCAGCCGTGTG...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR TCA 90 bp GATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGACCTTTAGGCCCGCACCACCATaGCCAGCTAACTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: DWPVLEISYKRTVHYVTFRPAPP*PANFCI
Trigger: AATACAAAAGTTAGCTGGTCATGGTGGTGCGGGCCT...AAAGGTCACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp AAGGACAGTACACTATGTGACCTTTTGCATCTGATGTCTTTCATTCAGTATCATAACAGTCAGTGTCTGTaGAGTTTGCAGGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: KDSTLCDLLHLMSFIQYHNSQCL*SLQGMP
Trigger: AGGCATGCCCTGCAAACTCCACAGACACTGACTGTT...ATGATACTGAATGAAAGACATCAGATGCAAAAGGTCACATAGTGTACTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CCA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAACTTGTCTACTCACTCTaGAGTGGTCCCCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKLVYSL*SGPQVI
Trigger: GATCACCTGGGGACCACTCCAGAGTGAGTAGACAAG...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR GCA 90 bp TTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTGCACTCACAGTGTCGTaGTACCTTCATCACTATCTA +
Preference number: 4 (lower is better)
Translates to: LHLMSFIQYHAFKVHPQCALTVS*YLHHYL
Trigger: TAGATAGTGATGAAGGTAGCACGACACTGTGAGTGC...ACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAATGGTACAATGGCAGCTaGAGCAAAGAGCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKWYNGS*SKEHRL
Trigger: AAGCCTGTGCTCTTTGCTCCAGCTGCCATTGTACCA...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGAAAATCTCAGGGATATaGCACAGCATACCCATAAGG +
Preference number: 4 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSKISGI*HSIPIR
Trigger: CCTTATGGGTATGCTGTGGCATATCCCTGAGATTTT...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp GATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGACCTTTTGTAGTGGGGATCACTaGTTCATTCCTTTTTATGGC +
Preference number: 4 (lower is better)
Translates to: DWPVLEISYKRTVHYVTFCSGDH*FIPFYG
Trigger: GCCATAAAAAGGAATGAAGCAGTGATCCCCACTACA...AAAGGTCACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR GCA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGGCACTCACAGTGTCGTaGTACCTTCATCACTATCTA +
Preference number: 4 (lower is better)
Translates to: NPLYISSDWPVLEISYKRALTVS*YLHHYL
Trigger: TAGATAGTGATGAAGGTAGCACGACACTGTGAGTGC...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGAACAAACTATCAAACTaGACCGGGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: NPLYISSDWPVLEISYKRNKLSN*TGPVIP
Trigger: TGGGATTACAGGCCCGGTCCAGTTTGATAGTTTGTT...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGTGTAGTGGGGATCACTaGTTCATTCCTTTTTATGGC +
Preference number: 4 (lower is better)
Translates to: NPLYISSDWPVLEISYKRCSGDH*FIPFYG
Trigger: GCCATAAAAAGGAATGAAGCAGTGATCCCCACTACA...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGTTTTTAATAGAGACGTaGTTTCACCATATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSFLIET*FHHIGQ
Trigger: CTGGCCAATATGGTGAAACCACGTCTCTATTAAAAA...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR TCA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGATCATTGCTGTTAGAATaGGATGGCTGGATCATTATT +
Preference number: 4 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRSLLLE*DGWIII
Trigger: AATAATGATCCAGCCATCTCATTCTAACAGCAATGA...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGCAGATTGGCCTGTTCTaGAAATTTCATATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSQIGLF*KFHIKG
Trigger: TCCTTTTATATGAAATTTCCAGAACAGGCCAATCTG...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp TCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGCAGATTGGCCTGTTCTaGAAATTTCATATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSDWPVLEISYKRTVHYVQIGLF*KFHIKG
Trigger: TCCTTTTATATGAAATTTCCAGAACAGGCCAATCTG...CACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
3UTR CAA 72 bp AAACAAAAACTGACACTACGAAGGACTGCTAATTATTaGGAGGACCTAGAATTCTCATACGTTACTTATGGA +
Preference number: 4 (lower is better)
Translates to: KQKLTLRRTANY*EDLEFSYVTYG
Trigger: TCCATAAGTAACGTATGAGAATTCTAGGTCCTCCAAATAATTAGCAGTCCTTCGTAGTGTCAGTTTTTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR GCA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGTTAGTCACTGGAAAATaGGAATTAAAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: NPLYISSDWPVLEISYKRLVTGK*ELKSQG
Trigger: TCCCTGAGATTTTAATTCGCATTTTCCAGTGACTAA...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CCA 90 bp CACTATTTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACACAGATTGGCCTGTTCTaGAAATTTCATATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HYFNHSKVSNSIAFSALTQIGLF*KFHIKG
Trigger: TCCTTTTATATGAAATTTCCAGAACAGGCCAATCTG...TGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAAATAGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CCA 90 bp CACTATTTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGGTATTGGTCCAACATaGAATAGAATAGAAAATCCA +
Preference number: 4 (lower is better)
Translates to: HYFNHSKVSNSIAFSALTGIGPT*NRIENP
Trigger: TGGATTTTCTATTCTATTCCATGTTGGACCAATACC...TGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAAATAGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CAA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATGCCAGGAGCTGCCACTaGGCATGCATGATGTTCACA +
Preference number: 5 (lower is better)
Translates to: APQSHLPTAAESHQSTIHARSCH*ACMMFT
Trigger: TGTGAACATCATGCATGCCAAGTGGCAGCTCCTGGC...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp CATCACTATCTAGGTCCGGAACATTTTCACCATCCCAGGAGGAAACCCCATCCTAGGCAGATAATGCCTTaGGGGATGACCCGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: HHYLGPEHFHHPRRKPHPRQIMP*GMTRPS
Trigger: AGACGGCCGGGTCATCCCCAAAGGCATTATCTGCCT...AGGATGGGGTTTCCTCCTGGGATGGTGAAAATGTTCCGGACCTAGATAGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGAGGCAGATAATGCCTTaGGGGATGACCCGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: RFIHSVVGITASFLFMAVRQIMP*GMTRPS
Trigger: AGACGGCCGGGTCATCCCCAAAGGCATTATCTGCCT...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp CATCACTATCTAGGTCCGGAACATTTTCACCATCCCAGGAGGAAACCCCATCCTCCACTCAGAGTGACCTaGAGCAAGAGAGTTAACGTC +
Preference number: 5 (lower is better)
Translates to: HHYLGPEHFHHPRRKPHPPLRVT*SKRVNV
Trigger: GACGTTAACTCTCTTGCTCAAGGTCACTCTGAGTGG...AGGATGGGGTTTCCTCCTGGGATGGTGAAAATGTTCCGGACCTAGATAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp CATCACTATCTAGGTCCGGAACATTTTCACCATCCCAGGAGGAAACCCCATCCTACCCCTGTCAAAGTCTaGTCTACTCACTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: HHYLGPEHFHHPRRKPHPTPVKV*STHSGV
Trigger: CACTCCAGAGTGAGTAGACAAGACTTTGACAGGGGT...AGGATGGGGTTTCCTCCTGGGATGGTGAAAATGTTCCGGACCTAGATAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTATTCCCATCTTCATCCTaGCTCAGCAGGAGTACATCA +
Preference number: 5 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLFPSSS*LSRSTS
Trigger: TGATGTACTCCTGCTGAGCAAGGATGAAGATGGGAA...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATTGGATGGACCATATTTaGTTTATCCTTTCATCTGGT +
Preference number: 5 (lower is better)
Translates to: APQSHLPTAAESHQSTIHWMDHI*FILSSG
Trigger: ACCAGATGAAAGGATAAACAAAATATGGTCCATCCA...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCACTATACATCTGTGTAATACTCCATaGTATGGATGGACCATATTT +
Preference number: 5 (lower is better)
Translates to: APQSHLPTAAESHQSTIHLCNTP*YGWTIF
Trigger: AAATATGGTCCATCCATACAATGGAGTATTACACAG...ATGTATAGTGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp TTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTAGGCAGATAATGCCTTaGGGGATGACCCGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: LHLMSFIQYHAFKVHPQCRQIMP*GMTRPS
Trigger: AGACGGCCGGGTCATCCCCAAAGGCATTATCTGCCT...ACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp TTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTGCCAGGAGCTGCCACTaGGCATGCATGATGTTCACA +
Preference number: 5 (lower is better)
Translates to: LHLMSFIQYHAFKVHPQCARSCH*ACMMFT
Trigger: TGTGAACATCATGCATGCCAAGTGGCAGCTCCTGGC...ACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTTTCCCATCTTCATCCTaGCTCAGCAGGAGTACATCA +
Preference number: 5 (lower is better)
Translates to: SRFIHSVVGITASFLFMAFPSSS*LSRSTS
Trigger: TGATGTACTCCTGCTGAGCAAGGATGAAGATGGGAA...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGAAGGCAGATAATGCCTTaGGGGATGACCCGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRRQIMP*GMTRPS
Trigger: AGACGGCCGGGTCATCCCCAAAGGCATTATCTGCCT...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CAA 90 bp TCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGGCCAGGAGCTGCCACTaGGCATGCATGATGTTCACA +
Preference number: 5 (lower is better)
Translates to: SSDWPVLEISYKRTVHYVARSCH*ACMMFT
Trigger: TGTGAACATCATGCATGCCAAGTGGCAGCTCCTGGC...CACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp TCAAAGTCTTGTCTACTCACTCTGGAGTGGTCCCCAGGTGATCTGATGTGCCTAACACTATGTGACCTTTaGCATCTGATGTCTTTCATT +
Preference number: 5 (lower is better)
Translates to: SKSCLLTLEWSPGDLMCLTLCDL*HLMSFI
Trigger: AATGAAAGACATCAGATGCAAAAGGTCACATAGTGT...TAGGCACATCAGATCACCTGGGGACCACTCCAGAGTGAGTAGACAAGACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp AGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTGTGGGGCAGAGACTTACTTaGAAAATTACTTCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: RFIHSVVGITASFLFMAVGQRLT*KITSVV
Trigger: TACCACAGAAGTAATTTTCAAAGTAAGTCTCTGCCC...CACAGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGTCAGCTGTGGCATCCTaGTCCCACACAACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: NPLYISSDWPVLEISYKRSAVAS*SHTTSS
Trigger: AGAGGAGGTTGTGTGGGACAAGGATGCCACAGCTGA...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586182.6
CDS-3UTR CAA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAACAGTGTCTGTGGAGTTaGCAGGGCATGCCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKQCLWS*QGMPVL
Trigger: TAGAACAGGCATGCCCTGCAAACTCCACAGACACTG...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp AATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGCAGTGTCTGTGGAGTTaGCAGGGCATGCCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: NPLYISSDWPVLEISYKRQCLWS*QGMPVL
Trigger: TAGAACAGGCATGCCCTGCAAACTCCACAGACACTG...CCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp TCAAGGTTCATCCACAGTGTAGTGGGGATCACTGCTTCATTCCTTTTTATGGCTACACTATGTGACCTTTaGCATCTGATGTCTTTCATT +
Preference number: 5 (lower is better)
Translates to: SRFIHSVVGITASFLFMATLCDL*HLMSFI
Trigger: AATGAAAGACATCAGATGCAAAAGGTCACATAGTGT...AGCCATAAAAAGGAATGAAGCAGTGATCCCCACTACACTGTGGATGAACCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGACACGATGCAGATGCTTaGGAAACAGTTTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRHDADA*ETVWQC
Trigger: ACACTGCCAAACTGTTTCCAAAGCATCTGCATCGTG...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CAA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCAGGGCAGAGACTTACTTaGAAAATTACTTCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPGQRLT*KITSVV
Trigger: TACCACAGAAGTAATTTTCAAAGTAAGTCTCTGCCC...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221307.13
ENST00000591058.5
CDS-3UTR CAA 90 bp AACAGACACTTCACCAAAGAAAATATAGGAGTGTCAAATAGGCACAGGAAGGCATGCTTTGGAAACAGTTaGGCAGTGTTTTGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: NRHFTKENIGVSNRHRKACFGNS*AVFCFV
Trigger: AACAAAACAAAACACTGCCAAACTGTTTCCAAAGCA...TGCCTTCCTGTGCCTATTTGACACTCCTATATTTTCTTTGGTGAAGTGTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CAA 90 bp TTCAACCATTCTAAAGTGTCCAATTCAATAGCATTTAGTGCACTCACAGTGTCGCGACTGACAAAGGACTaGTACATAGAACTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: FNHSKVSNSIAFSALTVSRLTKD*YIELSK
Trigger: TTTTGAGAGTTCTATGTACAAGTCCTTTGTCAGTCG...CGACACTGTGAGTGCACTAAATGCTATTGAATTGGACACTTTAGAATGGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CAA 90 bp GACCTTTTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACTGTGTAATACTCCATaGTATGGATGGACCATATTT +
Preference number: 5 (lower is better)
Translates to: DLLHLMSFIQYHAFKVHPLCNTP*YGWTIF
Trigger: AAATATGGTCCATCCATACAATGGAGTATTACACAG...TGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAAAAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp TTGCATCTGATGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTACACTATGTGACCTTTaGCATCTGATGTCTTTCATT +
Preference number: 5 (lower is better)
Translates to: LHLMSFIQYHAFKVHPQCTLCDL*HLMSFI
Trigger: AATGAAAGACATCAGATGCAAAAGGTCACATAGTGT...ACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACATCAGATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221307.13
ENST00000585846.1
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp ACAACCGAAGGAAAATTTAATGAGCAGATGATTGAACAGACACTTCACCAAAGAAGGACTGCTAATTATTaGGAGGACCTAGAATTCTCA +
Preference number: 5 (lower is better)
Translates to: TTEGKFNEQMIEQTLHQRRTANY*EDLEFS
Trigger: TGAGAATTCTAGGTCCTCCAAATAATTAGCAGTCCT...TCTTTGGTGAAGTGTCTGTTCAATCATCTGCTCATTAAATTTTCCTTCGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221307.13
CDS-3UTR CAA 90 bp TCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGCTGTGTAATACTCCATaGTATGGATGGACCATATTT +
Preference number: 5 (lower is better)
Translates to: SSDWPVLEISYKRTVHYVLCNTP*YGWTIF
Trigger: AAATATGGTCCATCCATACAATGGAGTATTACACAG...CACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp TCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAAGGACAGTACACTATGTGACACTATGTGACCTTTaGCATCTGATGTCTTTCATT +
Preference number: 5 (lower is better)
Translates to: SSDWPVLEISYKRTVHYVTLCDL*HLMSFI
Trigger: AATGAAAGACATCAGATGCAAAAGGTCACATAGTGT...CACATAGTGTACTGTCCTTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5
CDS-3UTR CAA 90 bp CCAATCCACTATACATCTCTTCAGATTGGCCTGTTCTGGAAATTTCATATAAAATGGATGGACCATATTTaGTTTATCCTTTCATCTGGT +
Preference number: 5 (lower is better)
Translates to: PIHYTSLQIGLFWKFHIKWMDHI*FILSSG
Trigger: ACCAGATGAAAGGATAAACAAAATATGGTCCATCCA...TTTTATATGAAATTTCCAGAACAGGCCAATCTGAAGAGATGTATAGTGGATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221307.13
ENST00000586182.6
ENST00000591058.5