RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP4F22 (Homo sapiens)

Ensembl gene IDs: ENSG00000171954

Ensembl transcript IDs: ENST00000269703.8, ENST00000601005.2

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGCCCTGAGTCATAGGTGGGTCTTAGGTCCTCTGAAGGCTCAGTaGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: WALSHRWVLGPLKAQ*ARPGDLDLQGRGLR
Trigger: CCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCACTGAGCCTTCAGAGGACCTAAGACCCACCTATGACTCAGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR TCA 90 bp ACCCTACGATCCAGCCTCACGCCTGAGCAGTCTGCCCGTATGAGCTaGGGGCCTCAGGAGGGTGATGTCCGAGTTAAAAGCTCTGACGTC +
Preference number: 1 (lower is better)
Translates to: TLRSSLTPEQSARMS*GPQEGDVRVKSSDV
Trigger: GACGTCAGAGCTTTTAACTCGGACATCACCCTCCTGAGGCCCTCAGCTCATACGGGCAGACTGCTCAGGCGTGAGGCTGGATCGTAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR TCA 90 bp CTCGAACCCTACGATCCAGCCTCACGCCTGAGCAGTCTGCCCGTATaGGCTGAGGGCCTCAGGAGGGTGATGTCCGAGTTAAAAGCTCTG +
Preference number: 1 (lower is better)
Translates to: LEPYDPASRLSSLPV*AEGLRRVMSELKAL
Trigger: CAGAGCTTTTAACTCGGACATCACCCTCCTGAGGCCCTCAGCTCATACGGGCAGACTGCTCAGGCGTGAGGCTGGATCGTAGGGTTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGTTTGGGGGCGGGGCCTaGACCCTCGGGAGCCGCAGG +
Preference number: 2 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGFGGGA*TLGSRR
Trigger: CCTGCGGCTCCCGAGGGTCCAGGCCCCGCCCCCAAA...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp CCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGTTTGGGGGCGGGGCCTaGACCCTCGGGAGCCGCAGG +
Preference number: 2 (lower is better)
Translates to: PQTGQVREVRGRDLSLKGFGGGA*TLGSRR
Trigger: CCTGCGGCTCCCGAGGGTCCAGGCCCCGCCCCCAAA...CCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGCGAGTCCTGGTCCTTTaGGGGCGGGGCCTGGACCCT +
Preference number: 2 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWRVLVL*GRGLDP
Trigger: AGGGTCCAGGCCCCGCCCCCAAAGGACCAGGACTCG...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGTGCCCTCGGGATCTTTaGGGCGAGTCCTGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVCPRDL*GESWSF
Trigger: AAAGGACCAGGACTCGCCCCAAAGATCCCGAGGGCA...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGGGGCAGGGTCGACCCTaGTCCCTCAAACAGGACAGG +
Preference number: 2 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGGQGRP*SLKQDR
Trigger: CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCC...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGCGAGTCCTGGTCCTTTaGGGGCGGGGCCTGGACCCT +
Preference number: 2 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWRVLVL*GRGLDP
Trigger: AGGGTCCAGGCCCCGCCCCCAAAGGACCAGGACTCG...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGTCAGTGGGCAAGGCCTaGAGACCTGGATCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGSVGKA*RPGSAG
Trigger: CCCTGCAGATCCAGGTCTCCAGGCCTTGCCCACTGA...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR TCA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGGGAGGAGCCTTGCCTTaGGGGGCGTGGCCAGTACCA +
Preference number: 2 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWGGALP*GAWPVP
Trigger: TGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTCC...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR TCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGTCTGCCCGTATGAGCTaGGGGCCTCAGGAGGGTGAT +
Preference number: 2 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWSARMS*GPQEGD
Trigger: ATCACCCTCCTGAGGCCCTCAGCTCATACGGGCAGA...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR GCA 90 bp CCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCCAGTACCACCAGGCTaGTCAACAGCGGTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: PQTGQVREVRGRDLSLKGPVPPG*STAVPG
Trigger: ACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGG...CCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCCAATCCGTAGGATCCTaGGGGCGGGGCCTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: SDVRLQLSSVWKPARGSAQSVGS*GRGLSP
Trigger: TGGGCTCAGGCCCCGCCCCCAGGATCCTACGGATTG...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR GCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGCTCAGTTTGGAAGCCTaGCAGGGGTTCAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGLSLEA*QGFSQL
Trigger: CAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAG...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR GCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCGCTGCTCAACAGCGGTaGCTGGTCATCCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: SDVRLQLSSVWKPARGSAAAQQR*LVIQEL
Trigger: CAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGC...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR GCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCCTCAAACAGGACAGGTaGGAGAAGTCAGGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: SDVRLQLSSVWKPARGSALKQDR*EKSGGG
Trigger: CCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAG...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR TCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAGGAGGAGCCTTGCCTTaGGGGGCGTGGCCAGTACCA +
Preference number: 2 (lower is better)
Translates to: VMSELKALTSGSSFPQFGGGALP*GAWPVP
Trigger: TGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTCC...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCAAGGCCTGGAGACCTaGATCTGCAGGGGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: RVMSELKALTSGSSFPQFQGLET*ICRGVA
Trigger: GGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTG...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR TCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTTGCAGGGGCGTGGCCTaGGGACCTCAATCCGTAGGA +
Preference number: 2 (lower is better)
Translates to: RVMSELKALTSGSSFPQFCRGVA*GPQSVG
Trigger: TCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCA...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR GCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTCCAGTACCACCAGGCTaGTCAACAGCGGTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVPVPPG*STAVPG
Trigger: ACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGG...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAGGGCAGGGTCGACCCTaGTCCCTCAAACAGGACAGG +
Preference number: 2 (lower is better)
Translates to: VMSELKALTSGSSFPQFGGQGRP*SLKQDR
Trigger: CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCC...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCAGTGGGCAAGGCCTaGAGACCTGGATCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVSVGKA*RPGSAG
Trigger: CCCTGCAGATCCAGGTCTCCAGGCCTTGCCCACTGA...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR GCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGCTGCTCAACAGCGGTaGCTGGTCATCCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: RVMSELKALTSGSSFPQFAAQQR*LVIQEL
Trigger: CAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGC...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR CCA 72 bp GGGCGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTaGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGG +
Preference number: 3 (lower is better)
Translates to: GRGLSPRGQGRP*SLKQDRCEKSG
Trigger: CCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CAA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACATGCCCTCGGGATCTTaGGGGCGAGTCCTGGTCCTT +
Preference number: 3 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNMPSGS*GRVLVL
Trigger: AAGGACCAGGACTCGCCCCAAAGATCCCGAGGGCAT...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR TCA 72 bp CAAGCAGCCTCGAACCCTACGATCCAGCCTCACGCCTaGGCAGTCTGCCCGTATGAGCTGAGGGCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: QAASNPTIQPHA*AVCPYELRASG
Trigger: TCCTGAGGCCCTCAGCTCATACGGGCAGACTGCTCAGGCGTGAGGCTGGATCGTAGGGTTCGAGGCTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR GCA 72 bp GGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTaGCTGGTCATCCAGGAGCTGAACCTGAACTTCGAG +
Preference number: 3 (lower is better)
Translates to: GRGQYHQAAQQR*LVIQELNLNFE
Trigger: CTCGAAGTTCAGGTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR-3UTR CAA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGATGCCCTCGGGATCTTaGGGGCGAGTCCTGGTCCTT +
Preference number: 3 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGMPSGS*GRVLVL
Trigger: AAGGACCAGGACTCGCCCCAAAGATCCCGAGGGCAT...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR TCA 72 bp TCCAGCCTCACGCCTGAGCAGTCTGCCCGTATGAGCTaGGGGCCTCAGGAGGGTGATGTCCGAGTTAAAAGC +
Preference number: 3 (lower is better)
Translates to: SSLTPEQSARMS*GPQEGDVRVKS
Trigger: GCTTTTAACTCGGACATCACCCTCCTGAGGCCCTCAGCTCATACGGGCAGACTGCTCAGGCGTGAGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR TCA 72 bp TACGATCCAGCCTCACGCCTGAGCAGTCTGCCCGTATaGGCTGAGGGCCTCAGGAGGGTGATGTCCGAGTTA +
Preference number: 3 (lower is better)
Translates to: YDPASRLSSLPV*AEGLRRVMSEL
Trigger: TAACTCGGACATCACCCTCCTGAGGCCCTCAGCTCATACGGGCAGACTGCTCAGGCGTGAGGCTGGATCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCGCAGCGGCTCCACCTTaGGCCAGAGCCCGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPAAAPP*ARARSP
Trigger: CGGAGAACGGGCTCTGGCTCAAGGTGGAGCCGCTGC...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCTCTCCGTGCGCAGTATaGGCTCCGGCTTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPSPCAV*APASAA
Trigger: TGCGGCGGAAGCCGGAGCTCATACTGCGCACGGAGA...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGGCTTCCGCCGCACCTTaGGCGTTCGGTCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRASAAP*AFGPRS
Trigger: TGAGCGTGGACCGAACGCGCAAGGTGCGGCGGAAGC...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCTTTGGGGGCGGGGCCTaGACCCTCGGGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WARPGDLDLQGRGLRTSIFGGGA*TLGSRR
Trigger: CCTGCGGCTCCCGAGGGTCCAGGCCCCGCCCCCAAA...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGCGAGTCCTGGTCCTTTaGGGGCGGGGCCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVRVLVL*GRGLDP
Trigger: AGGGTCCAGGCCCCGCCCCCAAAGGACCAGGACTCG...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGCAAGGCCTGGAGACCTaGATCTGCAGGGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRQGLET*ICRGVA
Trigger: GGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTG...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCGCAGCCGGCGGCAGGTaGTGTAGAAGCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPAAGGR*CRSSCR
Trigger: TCTGCAGGAGCTTCTACATCACCTGCCGCCGGCTGC...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACTTGCGCCGGGGAGGCTaGGGGAAGCAGCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNLRRGG*GKQRSR
Trigger: CCGGCTGCGCTGCTTCCCCCAGCCTCCCCGGCGCAA...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCTTGCGCCGGGGAGGCTaGGGGAAGCAGCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSLRRGG*GKQRSR
Trigger: CCGGCTGCGCTGCTTCCCCCAGCCTCCCCGGCGCAA...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGGGGCAGGGTCGACCCTaGTCCCTCAAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRGQGRP*SLKQDR
Trigger: CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCC...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGGGATCTGCAGGGGCGTaGCCTGAGGACCTCAATCCG +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRGSAGA*PEDLNP
Trigger: CGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCC...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCGGCGAGAGACAAGAGTaGCAGGTGGGTACTGGCGCA +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPGERQE*QVGTGA
Trigger: TGCGCCAGTACCCACCTGTCACTCTTGTCTCTCGCC...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTCTCCGTGCGCAGTATaGGCTCCGGCTTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRSPCAV*APASAA
Trigger: TGCGGCGGAAGCCGGAGCTCATACTGCGCACGGAGA...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGTGCAGGGGCGTGGCCTaGGGACCTCAATCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVCRGVA*GPQSVG
Trigger: TCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCA...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCTCTGCCCGTATGAGCTaGGGGCCTCAGGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPSARMS*GPQEGD
Trigger: ATCACCCTCCTGAGGCCCTCAGCTCATACGGGCAGA...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGCGGGTCTCAGCCTCCTaGCCTCGATCCGGATCCACC +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGARVSAS*PRSGST
Trigger: GGTGGATCCGGATCGAGGGCAGGAGGCTGAGACCCG...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS-3UTR CCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGGAGAGCGCTGCTGTaGGTTGTCCGGGTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRWRALL*VVRVKA
Trigger: CGCTTTGACCCGGACAACCCACAGCAGCGCTCTCCA...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp TGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCAAGGGAGACCGCTaGGCCCTCTGCCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: CLEGRGQYHQAAQQRCLVIKGDR*ALCQMP
Trigger: CGGCATCTGGCAGAGGGCTCAGCGGTCTCCCTTGAT...GACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCGCAGCGGCTCCACCTTaGGCCAGAGCCCGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSAAAPP*ARARSP
Trigger: CGGAGAACGGGCTCTGGCTCAAGGTGGAGCCGCTGC...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGGGAGGAGCCTTGCCTTaGGGGGCGTGGCCAGTACCA +
Preference number: 4 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGGGALP*GAWPVP
Trigger: TGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTCC...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGCCCCTGCTGACGCAGTaGCCGCCGCCGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWPLLTQ*PPPFLD
Trigger: ATCCAGGAACGGCGGCGGGCACTGCGTCAGCAGGGG...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGGCCCGCCGCCGTTCCTaGATGACTTCAGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVARRRS*MTSVVK
Trigger: CTTCACCACTGAAGTCATCCAGGAACGGCGGCGGGC...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGCGCGCAACTCGGCCATaGCGAAGCTCTGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGARATRP*RSSVRC
Trigger: GCATCGGACAGAGCTTCGCCATGGCCGAGTTGCGCG...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCTGCCCTCGGGATCTTTaGGGCGAGTCCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPCPRDL*GESWSF
Trigger: AAAGGACCAGGACTCGCCCCAAAGATCCCGAGGGCA...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGAGGAGCCTTGCCTTaGGGGGCGTGGCCAGTACCA +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWGGALP*GAWPVP
Trigger: TGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTCC...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGTGCAGGGGCGTGGCCTaGGGACCTCAATCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGCRGVA*GPQSVG
Trigger: TCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCA...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTCTGCCCGTATGAGCTaGGGGCCTCAGGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRSARMS*GPQEGD
Trigger: ATCACCCTCCTGAGGCCCTCAGCTCATACGGGCAGA...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp TGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGCCTCACGCCTaGGCAGTCTGCCCGTATGAG +
Preference number: 4 (lower is better)
Translates to: CLEGRGQYHQAAQQRCLVIQPHA*AVCPYE
Trigger: CTCATACGGGCAGACTGCTCAGGCGTGAGGCTGGAT...GACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGTTGCACTCAGGTCCTTaGTTTAGGGCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVLHSGP*FRASSR
Trigger: GCGGGAGCTGGCCCTAAAGCAAGGACCTGAGTGCAA...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS-3UTR GCA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCTCCAGCCCCAGGAGGTaGAGCAGGCGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: WARPGDLDLQGRGLRTSISSPRR*SRRSVM
Trigger: CATCACAGACCGCCTGCTGCACCTCCTGGGGCTGGA...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGGCCAGTGGAGAGCGCTaGTGTGGGTTGTCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGASGER*CGLSGS
Trigger: TGACCCGGACAACCCACAGCAGCGCTCTCCACTGGC...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCCGAAGCTCTGTCCGATaGAATTCCTGGGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPRSSVR*NSWVLQ
Trigger: CTGCAGGACCCAGGAATTGCATCGGACAGAGCTTCG...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGGCTTCCGCCGCACCTTaGGCGTTCGGTCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PQTGQVREVRGRDLSLKGASAAP*AFGPRS
Trigger: TGAGCGTGGACCGAACGCGCAAGGTGCGGCGGAAGC...CCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGCCAGTACCACCAGGCTaGTCAACAGCGGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRPVPPG*STAVPG
Trigger: ACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGG...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGCATCCTTGGGGGCGATaGCAGCTGAGGCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVHPWGR*QLRLPK
Trigger: TTTTGGGAGCCTCAGCTGCCATCGCCCCCAAGGATG...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTGGTGCAAGCGATACTaGCGCCGGACAGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRWCKRY*RRTDRA
Trigger: CGCTCTGTCTGTCCGGCGCCAGTATCGCTTGCACCA...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCGCCCGCCGCCGTTCCTaGATGACTTCAGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CLEGRGQYHQAAQQRCLVARRRS*MTSVVK
Trigger: CTTCACCACTGAAGTCATCCAGGAACGGCGGCGGGC...GACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGGACAAGAGTGACAGGTaGGTACTGGCGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVDKSDR*VLAQAL
Trigger: GAGAGCCTGCGCCAGTACCCACCTGTCACTCTTGTC...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGGGGCACATAGGCCAGTaGAGAGCGCTGCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGAGHIGQ*RALLWV
Trigger: AACCCACAGCAGCGCTCTCCACTGGCCTATGTGCCC...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGCGAGTCCTGGTCCTTTaGGGGCGGGGCCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGRVLVL*GRGLDP
Trigger: AGGGTCCAGGCCCCGCCCCCAAAGGACCAGGACTCG...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACCAATCCGTAGGATCCTaGGGGCGGGGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNQSVGS*GRGLSP
Trigger: TGGGCTCAGGCCCCGCCCCCAGGATCCTACGGATTG...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
3UTR CAA 72 bp TGGCTTTCCAGCCTCCTAGCCCGCAGCTTCGCTCAGTaGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WLSSLLARSFAQ*QSPSFPCWGLH
Trigger: GTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCTGGAAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCATCAAGGGAGACCGCTaGGCCCTCTGCCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSIKGDR*ALCQMP
Trigger: CGGCATCTGGCAGAGGGCTCAGCGGTCTCCCTTGAT...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCGGGATCAGGCCCCGAGCCCTCTGCCAGATaGCGCCATTTAGCATGCATA +
Preference number: 4 (lower is better)
Translates to: GARSQGAGPKPQGAGSGPEPSAR*RHLACI
Trigger: TATGCATGCTAAATGGCGGCATCTGGCAGAGGGCTC...GGGGCCTGATCCCGCCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCCCCCTGCTGACGCAGTaGCCGCCGCCGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SDVRLQLSSVWKPARGSAPLLTQ*PPPFLD
Trigger: ATCCAGGAACGGCGGCGGGCACTGCGTCAGCAGGGG...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCGCTGCTCAACAGCGGTaGCTGGTCATCCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WARPGDLDLQGRGLRTSIAAQQR*LVIQEL
Trigger: CAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGC...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCTCAAACAGGACAGGTaGGAGAAGTCAGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WARPGDLDLQGRGLRTSILKQDR*EKSGGG
Trigger: CCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAG...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCAGGTACATGCCCAGGTaGCCCAGCAGCCAGTTGCGC +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSRYMPR*PSSQLR
Trigger: GCGCAACTGGCTGCTGGGCCACCTGGGCATGTACCT...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACCGCGCAACTCGGCCATaGCGAAGCTCTGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNRATRP*RSSVRC
Trigger: GCATCGGACAGAGCTTCGCCATGGCCGAGTTGCGCG...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGGCCCTGAGTCATAGGTaGGTCTTAGGTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRALSHR*VLGPLK
Trigger: CTTCAGAGGACCTAAGACCCACCTATGACTCAGGGC...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGCTCCCAAAAGGGGTTTaGTGTAATCAGGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRLPKGV*CNQGAP
Trigger: TGGTGCACCCTGATTACATCAAACCCCTTTTGGGAG...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCGCCCATCTGGGAGCTTaGTGTCCTCCGTGCATTGGC +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSAHLGA*CPPCIG
Trigger: GCCAATGCACGGAGGACATCAAGCTCCCAGATGGGC...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGACCATGTCACAGGCCTaGCGGAACCTCCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGTMSQA*RNLRPS
Trigger: GGATGGGCGGAGGTTCCGGCAGGCCTGTGACATGGT...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGTCAGTGGTGAAGTGGTaGACCATGTCACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGASVVKW*TMSQAC
Trigger: GCAGGCCTGTGACATGGTGCACCACTTCACCACTGA...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGAGGTACATGCCCAGGTaGCCCAGCAGCCAGTTGCGC +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGRYMPR*PSSQLR
Trigger: GCGCAACTGGCTGCTGGGCCACCTGGGCATGTACCT...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGTGGTGCAAGCGATACTaGCGCCGGACAGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWWCKRY*RRTDRA
Trigger: CGCTCTGTCTGTCCGGCGCCAGTATCGCTTGCACCA...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGAGGGGTTGTACACCTTaGAGTCAGGCCACACTGTGG +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGARGCTP*SQATLW
Trigger: CCACAGTGTGGCCTGACTCCAAGGTGTACAACCCCT...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGGGGCACATAGGCCAGTaGAGAGCGCTGCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PQTGQVREVRGRDLSLKGGHIGQ*RALLWV
Trigger: AACCCACAGCAGCGCTCTCCACTGGCCTATGTGCCC...CCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGGAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGGGGCGGGGCCTaGACCCTCGGGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RRVMSELKALTSGSSFPQFGGGA*TLGSRR
Trigger: CCTGCGGCTCCCGAGGGTCCAGGCCCCGCCCCCAAA...CTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGGGGCAGGGTCGACCCTaGTCCCTCAAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGGQGRP*SLKQDR
Trigger: CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCC...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCTCAGTGGGCAAGGCCTaGAGACCTGGATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSSVGKA*RPGSAG
Trigger: CCCTGCAGATCCAGGTCTCCAGGCCTTGCCCACTGA...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGTCAGTGGGCAAGGCCTaGAGACCTGGATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWSVGKA*RPGSAG
Trigger: CCCTGCAGATCCAGGTCTCCAGGCCTTGCCCACTGA...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGACCTTCTTCTCATCTTaGAGGCCCGCCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVTFFSS*RPASFG
Trigger: TCCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGT...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGACTTGTCACCTTTGCTaGGCAGCAGCCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGTCHLC*AAAHPL
Trigger: TAGGGGATGGGCTGCTGCTCAGCAAAGGTGACAAGT...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGCAGTCTGCCCGTATaGGCTGAGGGCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SDVRLQLSSVWKPARGSASSLPV*AEGLRR
Trigger: CCTCCTGAGGCCCTCAGCTCATACGGGCAGACTGCT...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGTCCAGCCCCAGGAGGTaGAGCAGGCGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWSSPRR*SRRSVM
Trigger: CATCACAGACCGCCTGCTGCACCTCCTGGGGCTGGA...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGTGGACACCGCGTATATaGGGAACGCCGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGWTPRI*GTPSSP
Trigger: TGGAGAAGACGGCGTTCCGCATATACGCGGTGTCCA...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGACCATGTCACAGGCCTaGCGGAACCTCCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWTMSQA*RNLRPS
Trigger: GGATGGGCGGAGGTTCCGGCAGGCCTGTGACATGGT...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGGCTGCTCAACAGCGGTaGCTGGTCATCCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGAAQQR*LVIQEL
Trigger: CAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGC...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGCCAGTACCACCAGGCTaGTCAACAGCGGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGPVPPG*STAVPG
Trigger: ACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGG...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGCTCAAACAGGACAGGTaGGAGAAGTCAGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGLKQDR*EKSGGG
Trigger: CCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAG...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACGACAAGAGTGACAGGTaGGTACTGGCGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNDKSDR*VLAQAL
Trigger: GAGAGCCTGCGCCAGTACCCACCTGTCACTCTTGTC...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCGATGATGCGCCCATCTaGGAGCTTGATGTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: WARPGDLDLQGRGLRTSIDDAPI*ELDVLR
Trigger: ACGGAGGACATCAAGCTCCCAGATGGGCGCATCATC...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGTGGAGAGCGCTGCTGTaGGTTGTCCGGGTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGWRALL*VVRVKA
Trigger: CGCTTTGACCCGGACAACCCACAGCAGCGCTCTCCA...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCTGCCCTCGGGATCTTTaGGGCGAGTCCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSCPRDL*GESWSF
Trigger: AAAGGACCAGGACTCGCCCCAAAGATCCCGAGGGCA...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCGGATCTGCAGGGGCGTaGCCTGAGGACCTCAATCCG +
Preference number: 4 (lower is better)
Translates to: SDVRLQLSSVWKPARGSAGSAGA*PEDLNP
Trigger: CGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCC...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGGCCCTGAGTCATAGGTaGGTCTTAGGTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGAALSHR*VLGPLK
Trigger: CTTCAGAGGACCTAAGACCCACCTATGACTCAGGGC...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGACCTTCTTCTCATCTTaGAGGCCCGCCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGATFFSS*RPASFG
Trigger: TCCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGT...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGCCTTTCATGACTTCCTaGATCTCTTCTCGGCATTTC +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRPFMTS*ISSRHF
Trigger: GAAATGCCGAGAAGAGATTCAGGAAGTCATGAAAGG...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGGTTGTAAAGGGCAGCTaGGTCAGATCGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWVVKGS*VRSSHS
Trigger: GGAGTGGGACGATCTGACTCAGCTGCCCTTTACAAC...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCGTTGTAAAGGGCAGCTaGGTCAGATCGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSVVKGS*VRSSHS
Trigger: GGAGTGGGACGATCTGACTCAGCTGCCCTTTACAAC...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCGAAGCTCTGTCCGATaGAATTCCTGGGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSRSSVR*NSWVLQ
Trigger: CTGCAGGACCCAGGAATTGCATCGGACAGAGCTTCG...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCTCAGTTTGGAAGCCTaGCAGGGGTTCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PQTGQVREVRGRDLSLKGLSLEA*QGFSQL
Trigger: CAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAG...CCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGCTCAGTTTGGAAGCCTaGCAGGGGTTCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWLSLEA*QGFSQL
Trigger: CAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAG...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGGCAGCTTCGCTCAGTTaGAGAGCCCCTCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWAASLS*RAPHSH
Trigger: ATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGC...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCGGAAGAGGAGAAGGGTaGACACCGCGTATATGCGGA +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSGRGEG*TPRICG
Trigger: TCCGCATATACGCGGTGTCCACCCTTCTCCTCTTCC...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGATGTCCTCCGTGCATTaGCGAGAGACAAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRMSSVH*RETRVT
Trigger: TGTCACTCTTGTCTCTCGCCAATGCACGGAGGACAT...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCGATGATGCGCCCATCTaGGAGCTTGATGTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSDDAPI*ELDVLR
Trigger: ACGGAGGACATCAAGCTCCCAGATGGGCGCATCATC...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGAGTCAGGCCACACTGTaGGGTTGTGGTGGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWSQATL*GCGGFH
Trigger: ATGGAACCCACCACAACCCCACAGTGTGGCCTGACT...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGAGTTGCTGTTGTAGCTaGAGACACATTTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRSCCCS*RHISED
Trigger: GTCTTCAGAAATGTGTCTTCAGCTACAACAGCAACT...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCGCTCCCGGCCTTTCATaGCTTCCTGAATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSAPGLS*LPESLL
Trigger: GAGAAGAGATTCAGGAAGTCATGAAAGGCCGGGAGC...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGTCCAAGGTCTTCCCCTaGTTGGCCTTAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWSKVFP*LALSQA
Trigger: GGCCTGGCTTAAGGCCAAGCAGGGGAAGACCTTGGA...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGGCAGCTTCGCTCAGTTaGAGAGCCCCTCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGAASLS*RAPHSH
Trigger: ATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGC...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCTTCCATCTTCATCCCTaGCCAGGAGCAGCACATCAA +
Preference number: 4 (lower is better)
Translates to: WARPGDLDLQGRGLRTSIFHLHP*PGAAHQ
Trigger: TTGATGTGCTGCTCCTGGCCAGGGATGAAGATGGAA...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTCTCGGCATTTCTCCTaGTATTCCGGATACTTTGCC +
Preference number: 4 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRSRHFS*YSGYFA
Trigger: GGCAAAGTATCCGGAATACCAGGAGAAATGCCGAGA...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGCCGAGCGGTAGTAAATaGAGTCGAGGTAGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGPSGSK*SRGSGA
Trigger: TGCACCACTACCTCGACTTCATTTACTACCGCTCGG...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CATGCTGGGGGCTCCACGTGTAAGGATCTGGCTGAGCTAGGGGTGGAGGGTGGGTCGGATATCCTCGTCTaGCAGTTCCTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: HAGGSTCKDLAELGVEGGSDILV*QFLSIF
Trigger: GAAGATGGAAAGGAACTGTCAGACGAGGATATCCGA...CCCACCCTCCACCCCTAGCTCAGCCAGATCCTTACACGTGGAGCCCCCAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGGAGCCCTCTGCCAGATaGCGCCATTTAGCATGCATA +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGEPSAR*RHLACI
Trigger: TATGCATGCTAAATGGCGGCATCTGGCAGAGGGCTC...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCGGAAGAGGAGAAGGGTaGACACCGCGTATATGCGGA +
Preference number: 4 (lower is better)
Translates to: SDVRLQLSSVWKPARGSAGRGEG*TPRICG
Trigger: TCCGCATATACGCGGTGTCCACCCTTCTCCTCTTCC...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGTTCCATCTTCATCCCTaGCCAGGAGCAGCACATCAA +
Preference number: 4 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWFHLHP*PGAAHQ
Trigger: TTGATGTGCTGCTCCTGGCCAGGGATGAAGATGGAA...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGAGTCAGGCCACACTGTaGGGTTGTGGTGGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWSQATL*GCGGFH
Trigger: ATGGAACCCACCACAACCCCACAGTGTGGCCTGACT...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACTCAGCAAAGGATCTTTaGGCAAGGGAGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNSAKDL*AREEGR
Trigger: CCTTCCTTCCTCCCTTGCCCAAAGATCCTTTGCTGA...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGCTCCCAAAAGGGGTTTaGTGTAATCAGGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGLPKGV*CNQGAP
Trigger: TGGTGCACCCTGATTACATCAAACCCCTTTTGGGAG...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp AGGAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGGCCCATCTGGGAGCTTaGTGTCCTCCGTGCATTGGC +
Preference number: 4 (lower is better)
Translates to: RRVMSELKALTSGSSFPQAHLGA*CPPCIG
Trigger: GCCAATGCACGGAGGACATCAAGCTCCCAGATGGGC...CTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGGGGCTTACAAGGGTCTaGGTTTACAAAACAACAACA +
Preference number: 4 (lower is better)
Translates to: LDLQGRGLRTSIRRILGAGLTRV*VYKTTT
Trigger: TGTTGTTGTTTTGTAAACTCAGACCCTTGTAAGCCC...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCACCAAGAGTACATGGTaGATGTTGTCCAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: WARPGDLDLQGRGLRTSITKSTW*MLSSTF
Trigger: GAAGGTACTGGACAACATGCACCATGTACTCTTGGT...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCAATCCGTAGGATCCTaGGGGCGGGGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RVMSELKALTSGSSFPQFQSVGS*GRGLSP
Trigger: TGGGCTCAGGCCCCGCCCCCAGGATCCTACGGATTG...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGCAGCTTTCCTCAGTTTaGAAGCCTGCCAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWQLSSV*KPARGS
Trigger: TGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTG...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp AGGAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGGCAGCAGGCGGTCTGTaGTGGGCAGCATCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RRVMSELKALTSGSSFPQAAGGL*WAASCF
Trigger: AAAACAGGATGCTGCCCATCACAGACCGCCTGCTGC...CTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS-3UTR TCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGCAGCCGGCGGCAGGTaGTGTAGAAGCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVMSELKALTSGSSFPQFAAGGR*CRSSCR
Trigger: TCTGCAGGAGCTTCTACATCACCTGCCGCCGGCTGC...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTGGCGAGAGACAAGAGTaGCAGGTGGGTACTGGCGCA +
Preference number: 4 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVGERQE*QVGTGA
Trigger: TGCGCCAGTACCCACCTGTCACTCTTGTCTCTCGCC...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTAGCAGTCTGCCCGTATaGGCTGAGGGCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RVMSELKALTSGSSFPQFSSLPV*AEGLRR
Trigger: CCTCCTGAGGCCCTCAGCTCATACGGGCAGACTGCT...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTATCCAGCCTCACGCCTaGGCAGTCTGCCCGTATGAG +
Preference number: 4 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVIQPHA*AVCPYE
Trigger: CTCATACGGGCAGACTGCTCAGGCGTGAGGCTGGAT...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAGCCAGTGGAGAGCGCTaGTGTGGGTTGTCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: VMSELKALTSGSSFPQFGASGER*CGLSGS
Trigger: TGACCCGGACAACCCACAGCAGCGCTCTCCACTGGC...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp CCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGCATACCAAGAGTACATaGTGCATGTTGTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: PQTGQVREVRGRDLSLKGHTKST*CMLSST
Trigger: GGTACTGGACAACATGCACCATGTACTCTTGGTATG...CCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp AGGAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGACTTGTCACCTTTGCTaGGCAGCAGCCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: RRVMSELKALTSGSSFPQTCHLC*AAAHPL
Trigger: TAGGGGATGGGCTGCTGCTCAGCAAAGGTGACAAGT...CTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACAGTTGCTGTTGTAGCTaGAGACACATTTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNSCCCS*RHISED
Trigger: GTCTTCAGAAATGTGTCTTCAGCTACAACAGCAACT...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCTCGGATATCCTCGTCTaGCAGTTCCTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SDVRLQLSSVWKPARGSASDILV*QFLSIF
Trigger: GAAGATGGAAAGGAACTGTCAGACGAGGATATCCGA...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGCCTTTCATGACTTCCTaGATCTCTTCTCGGCATTTC +
Preference number: 4 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGPFMTS*ISSRHF
Trigger: GAAATGCCGAGAAGAGATTCAGGAAGTCATGAAAGG...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp ACCCTGGTCCCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCGGGCTTACAAGGGTCTaGGTTTACAAAACAACAACA +
Preference number: 4 (lower is better)
Translates to: TLVPQTGQVREVRGRDLSGLTRV*VYKTTT
Trigger: TGTTGTTGTTTTGTAAACTCAGACCCTTGTAAGCCC...GCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGGGACCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCCAAGGTCTTCCCCTaGTTGGCCTTAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVSKVFP*LALSQA
Trigger: GGCCTGGCTTAAGGCCAAGCAGGGGAAGACCTTGGA...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCAGTGGTGAAGTGGTaGACCATGTCACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVSVVKW*TMSQAC
Trigger: GCAGGCCTGTGACATGGTGCACCACTTCACCACTGA...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACGTATTCCGGATACTTTaGCAAATTGAACAGCATCCA +
Preference number: 4 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNVFRIL*QIEQHP
Trigger: TGGATGCTGTTCAATTTGGCAAAGTATCCGGAATAC...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTGTTTTCAATTCTTTTaGGTTCACTGTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRCFQFF*VHCLLP
Trigger: AGGAAGAAGACAGTGAACCCAAAAGAATTGAAAACA...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS-3UTR CCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGACATCCTTGGGGGCGATaGCAGCTGAGGCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VMSELKALTSGSSFPQFGHPWGR*QLRLPK
Trigger: TTTTGGGAGCCTCAGCTGCCATCGCCCCCAAGGATG...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTAGGGGTTGTACACCTTaGAGTCAGGCCACACTGTGG +
Preference number: 4 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVRGCTP*SQATLW
Trigger: CCACAGTGTGGCCTGACTCCAAGGTGTACAACCCCT...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCGATACTTTGCCAAATTaGACAGCATCCAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: SDVRLQLSSVWKPARGSADTLPN*TASKRS
Trigger: GGATCTCTTGGATGCTGTTCAATTTGGCAAAGTATC...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAAGGCCCGCCTCATTTaGAAGGTACATGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VMSELKALTSGSSFPQFGKARLI*KVHAQV
Trigger: CACCTGGGCATGTACCTTCCAAATGAGGCGGGCCTT...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGGAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTCAGCAAAGGATCTTTaGGCAAGGGAGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RRVMSELKALTSGSSFPQSAKDL*AREEGR
Trigger: CCTTCCTTCCTCCCTTGCCCAAAGATCCTTTGCTGA...CTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGACCGAGCGGTAGTAAATaGAGTCGAGGTAGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VMSELKALTSGSSFPQFGPSGSK*SRGSGA
Trigger: TGCACCACTACCTCGACTTCATTTACTACCGCTCGG...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp TCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCGTATTCCGGATACTTTaGCAAATTGAACAGCATCCA +
Preference number: 4 (lower is better)
Translates to: SDVRLQLSSVWKPARGSAVFRIL*QIEQHP
Trigger: TGGATGCTGTTCAATTTGGCAAAGTATCCGGAATAC...GGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCAGCTTTCCTCAGTTTaGAAGCCTGCCAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RVMSELKALTSGSSFPQFQLSSV*KPARGS
Trigger: TGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTG...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCTCGGCATTTCTCCTaGTATTCCGGATACTTTGCC +
Preference number: 4 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVSRHFS*YSGYFA
Trigger: GGCAAAGTATCCGGAATACCAGGAGAAATGCCGAGA...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAATGTCCTCCGTGCATTaGCGAGAGACAAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: VMSELKALTSGSSFPQFGMSSVH*RETRVT
Trigger: TGTCACTCTTGTCTCTCGCCAATGCACGGAGGACAT...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTTGTCAGCGCTCTGGTTaGAGATCTTCATGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: RVMSELKALTSGSSFPQFCQRSG*RSSCKA
Trigger: AGCCTTACATGAAGATCTTCAACCAGAGCGCTGACA...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR TCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGATGTCAGCGCTCTGGTTaGAGATCTTCATGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: VMSELKALTSGSSFPQFGCQRSG*RSSCKA
Trigger: AGCCTTACATGAAGATCTTCAACCAGAGCGCTGACA...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CCA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTCATACCAAGAGTACATaGTGCATGTTGTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVHTKST*CMLSST
Trigger: GGTACTGGACAACATGCACCATGTACTCTTGGTATG...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR GCA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAACCAAGAGTACATGGTaGATGTTGTCCAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: VMSELKALTSGSSFPQFGTKSTW*MLSSTF
Trigger: GAAGGTACTGGACAACATGCACCATGTACTCTTGGT...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp TGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCTGGCCCAGCAGCCAGTaGCGCCGGGGAGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: CLEGRGQYHQAAQQRCLVWPSSQ*RRGGWG
Trigger: CCCCCAGCCTCCCCGGCGCAACTGGCTGCTGGGCCA...GACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGGGCAGCGGCTCCACCTaGAGCCAGAGCCCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRGSGST*SQSPFS
Trigger: GGAGAACGGGCTCTGGCTCAAGGTGGAGCCGCTGCC...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp AGCCTCCTAGCCCGCAGCTTCGCTCAGTTGCAGAGCCCCTCATTCCCATGCTGGTGGCCCAGCAGCCAGTaGCGCCGGGGAGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SLLARSFAQLQSPSFPCWWPSSQ*RRGGWG
Trigger: CCCCCAGCCTCCCCGGCGCAACTGGCTGCTGGGCCA...CCAGCATGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCGGGCTAGGAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGCGGTGCCGGCTCCACTaGTCACCTTTGCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRRCRLH*SPLLSS
Trigger: GCTGCTCAGCAAAGGTGACAAGTGGAGCCGGCACCG...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGCGCAGCTTCGCTCAGTaGCAGAGCCCCTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRRSFAQ*QSPSFP
Trigger: TGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCG...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGGAAGGCCCGCCTCATTaGGAAGGTACATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDREGPPH*EGTCPG
Trigger: ACCTGGGCATGTACCTTCCAAATGAGGCGGGCCTTC...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGCGGTGCCGGCTCCACTaGTCACCTTTGCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRRCRLH*SPLLSS
Trigger: GCTGCTCAGCAAAGGTGACAAGTGGAGCCGGCACCG...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGCGCCCATCTGGGAGCTaGATGTCCTCCGTGCATTGG +
Preference number: 5 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRRPSGS*MSSVHW
Trigger: CCAATGCACGGAGGACATCAAGCTCCCAGATGGGCG...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GAGGAGCCTTGCCTTGAGGGGCGTGGCCAGTACCACCAGGCTGCTCAACAGCGGATGCCCTCGGGATCTTaGGGGCGAGTCCTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: EEPCLEGRGQYHQAAQQRMPSGS*GRVLVL
Trigger: AAGGACCAGGACTCGCCCCAAAGATCCCGAGGGCAT...CCGCTGTTGAGCAGCCTGGTGGTACTGGCCACGCCCCTCAAGGCAAGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCCGTAGGATCCTGGGGGCGATGCCCTCGGGATCTTaGGGGCGAGTCCTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: LDLQGRGLRTSIRRILGAMPSGS*GRVLVL
Trigger: AAGGACCAGGACTCGCCCCAAAGATCCCGAGGGCAT...CGCCCCCAGGATCCTACGGATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS TCA 90 bp CACAGGCCTGCCGGAACCTCCGCCCATCCGCCGAGCGGTAGTAAATaGAGTCGAGGTAGTGGTGCAAGCGATACTGGCGCCGGACAGACA +
Preference number: 5 (lower is better)
Translates to: HRPAGTSAHPPSGSK*SRGSGASDTGAGQT
Trigger: TGTCTGTCCGGCGCCAGTATCGCTTGCACCACTACCTCGACTTCATTTACTACCGCTCGGCGGATGGGCGGAGGTTCCGGCAGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGAAGCAGATGATTCCTTaGGGGATGATGCGCCCATCT +
Preference number: 5 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRKQMIP*GMMRPS
Trigger: AGATGGGCGCATCATCCCCAAAGGAATCATCTGCTT...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACCGCAGCTTCGCTCAGTaGCAGAGCCCCTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNRSFAQ*QSPSFP
Trigger: TGGGAATGAGGGGCTCTGCAACTGAGCGAAGCTGCG...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACGAAGGCCCGCCTCATTaGGAAGGTACATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNEGPPH*EGTCPG
Trigger: ACCTGGGCATGTACCTTCCAAATGAGGCGGGCCTTC...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CCTCAAACAGGACAGGTGCGAGAAGTCAGGGGGCGGGACCTAAGCCTCAAGGGGGATGTCCTCCGTGCATaGGCGAGAGACAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: PQTGQVREVRGRDLSLKGDVLRA*ARDKSD
Trigger: GTCACTCTTGTCTCTCGCCAATGCACGGAGGACATC...CCCCTTGAGGCTTAGGTCCCGCCCCCTGACTTCTCGCACCTGTCCTGTTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTGGCTTCCGCCGCACCTaGCGCGTTCGGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVGFRRT*RVRSTL
Trigger: GAGCGTGGACCGAACGCGCAAGGTGCGGCGGAAGCC...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp AGGAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGGGCAGCGGCTCCACCTaGAGCCAGAGCCCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRVMSELKALTSGSSFPQGSGST*SQSPFS
Trigger: GGAGAACGGGCTCTGGCTCAAGGTGGAGCCGCTGCC...CTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCTACCTTCTTCTCATCTaGAAGGCCCGCCTCATTTGG +
Preference number: 5 (lower is better)
Translates to: WARPGDLDLQGRGLRTSIYLLLI*KARLIW
Trigger: CCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGTA...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGTGATCACTCATCTTCTCTaGGCAGTTGCTGTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: GPEPKGAGSTLVPQTGQVITHLL*AVAVVA
Trigger: AGCTACAACAGCAACTGCCAAGAGAAGATGAGTGAT...CACCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CGGGGCCTGAGCCCAAGGGGGCAGGGTCGACCCTGGTCCCTCAAACAGGACAGGGGATACTTTGCCAAATaGAACAGCATCCAAGAGATC +
Preference number: 5 (lower is better)
Translates to: RGLSPRGQGRPWSLKQDRGYFAK*NSIQEI
Trigger: GATCTCTTGGATGCTGTTCAATTTGGCAAAGTATCC...CCTGTCCTGTTTGAGGGACCAGGGTCGACCCTGCCCCCTTGGGCTCAGGCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGAGGCTTCCGCCGCACCTaGCGCGTTCGGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: VMSELKALTSGSSFPQFGGFRRT*RVRSTL
Trigger: GAGCGTGGACCGAACGCGCAAGGTGCGGCGGAAGCC...TCCAAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS GCA 90 bp GACACCGCGTATATGCGGAACGCCGTCTTCTCCAGCCCCAGGAGGTaGAGCAGGCGGTCTGTGATGGGCAGCATCCTGTTTTCAATTCTT +
Preference number: 5 (lower is better)
Translates to: DTAYMRNAVFSSPRR*SRRSVMGSILFSIL
Trigger: AAGAATTGAAAACAGGATGCTGCCCATCACAGACCGCCTGCTGCACCTCCTGGGGCTGGAGAAGACGGCGTTCCGCATATACGCGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS CCA 90 bp GGAAACGTAGCAGTGTTAGTGCCACAACCACGCGCAACTCGGCCATaGCGAAGCTCTGTCCGATGCAATTCCTGGGTCCTGCAGAGAAGG +
Preference number: 5 (lower is better)
Translates to: GNVAVLVPQPRATRP*RSSVRCNSWVLQRR
Trigger: CCTTCTCTGCAGGACCCAGGAATTGCATCGGACAGAGCTTCGCCATGGCCGAGTTGCGCGTGGTTGTGGCACTAACACTGCTACGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GGCCAGTACCACCAGGCTGCTCAACAGCGGTGCCTGGTCATCCAGGAGCTGAACTACCTTCTTCTCATCTaGAAGGCCCGCCTCATTTGG +
Preference number: 5 (lower is better)
Translates to: GQYHQAAQQRCLVIQELNYLLLI*KARLIW
Trigger: CCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGTA...GTTCAGCTCCTGGATGACCAGGCACCGCTGTTGAGCAGCCTGGTGGTACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp TGGGCAAGGCCTGGAGACCTGGATCTGCAGGGGCGTGGCCTGAGGACCTCAATCATCACTCATCTTCTCTaGGCAGTTGCTGTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: WARPGDLDLQGRGLRTSIITHLL*AVAVVA
Trigger: AGCTACAACAGCAACTGCCAAGAGAAGATGAGTGAT...GATTGAGGTCCTCAGGCCACGCCCCTGCAGATCCAGGTCTCCAGGCCTTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS TCA 90 bp TCGTCCCACTCCAGCTCCTCCAGCTCCCGGCCTTTCATGACTTCCTaGATCTCTTCTCGGCATTTCTCCTGGTATTCCGGATACTTTGCC +
Preference number: 5 (lower is better)
Translates to: SSHSSSSSSRPFMTS*ISSRHFSWYSGYFA
Trigger: GGCAAAGTATCCGGAATACCAGGAGAAATGCCGAGAAGAGATTCAGGAAGTCATGAAAGGCCGGGAGCTGGAGGAGCTGGAGTGGGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS TCA 90 bp GAGTCAGATCGTCCCACTCCAGCTCCTCCAGCTCCCGGCCTTTCATaGCTTCCTGAATCTCTTCTCGGCATTTCTCCTGGTATTCCGGAT +
Preference number: 5 (lower is better)
Translates to: ESDRPTPAPPAPGLS*LPESLLGISPGIPD
Trigger: ATCCGGAATACCAGGAGAAATGCCGAGAAGAGATTCAGGAAGTCATGAAAGGCCGGGAGCTGGAGGAGCTGGAGTGGGACGATCTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp CAGGCTCCAGCTTTCCTCAGTTTGGAAGCCTGCCAGGGGTTCAGCCAGTTGGGGAGTACATGGTGCATGTaGTCCAGTACCTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: QAPAFLSLEACQGFSQLGSTWCM*SSTFFS
Trigger: TGAGAAGAAGGTACTGGACAACATGCACCATGTACT...CCCCAACTGGCTGAACCCCTGGCAGGCTTCCAAACTGAGGAAAGCTGGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTCGCCCATCTGGGAGCTaGATGTCCTCCGTGCATTGG +
Preference number: 5 (lower is better)
Translates to: RVMSELKALTSGSSFPQFRPSGS*MSSVHW
Trigger: CCAATGCACGGAGGACATCAAGCTCCCAGATGGGCG...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS TCA 90 bp ACCAAGAGTACATGGTGCATGTTGTCCAGTACCTTCTTCTCATCTTaGAGGCCCGCCTCATTTGGAAGGTACATGCCCAGGTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TKSTWCMLSSTFFSS*RPASFGRYMPRWPS
Trigger: GCTGGGCCACCTGGGCATGTACCTTCCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGTACTGGACAACATGCACCATGTACTCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTGATGTCCTCCGTGCATaGGCGAGAGACAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVDVLRA*ARDKSD
Trigger: GTCACTCTTGTCTCTCGCCAATGCACGGAGGACATC...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp TCAGTTGCAGAGCCCCTCATTCCCATGCTGGGGGCTCCACGTGTAAGGATCTGGTCACTGTCTTCTTCCTaGCTGGTATTTTCTGTTATT +
Preference number: 5 (lower is better)
Translates to: SVAEPLIPMLGAPRVRIWSLSSS*LVFSVI
Trigger: AATAACAGAAAATACCAGCAAGGAAGAAGACAGTGA...CCAGATCCTTACACGTGGAGCCCCCAGCATGGGAATGAGGGGCTCTGCAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS-3UTR CAA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTAAGCAGATGATTCCTTaGGGGATGATGCGCCCATCT +
Preference number: 5 (lower is better)
Translates to: RVMSELKALTSGSSFPQFKQMIP*GMMRPS
Trigger: AGATGGGCGCATCATCCCCAAAGGAATCATCTGCTT...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp GAGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTAGTACATGGTGCATGTaGTCCAGTACCTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: EGDVRVKSSDVRLQLSSVSTWCM*SSTFFS
Trigger: TGAGAAGAAGGTACTGGACAACATGCACCATGTACT...AACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS-3UTR CAA 90 bp AGGGTGATGTCCGAGTTAAAAGCTCTGACGTCAGGCTCCAGCTTTCCTCAGTTTGGATACTTTGCCAAATaGAACAGCATCCAAGAGATC +
Preference number: 5 (lower is better)
Translates to: RVMSELKALTSGSSFPQFGYFAK*NSIQEI
Trigger: GATCTCTTGGATGCTGTTCAATTTGGCAAAGTATCC...AAACTGAGGAAAGCTGGAGCCTGACGTCAGAGCTTTTAACTCGGACATCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS GCA 72 bp GGCCTTAAGCCAGGCCTCGGCCCCCTGCTGACGCAGTaGCCGCCGCCGTTCCTGGATGACTTCAGTGGTGAA +
Preference number: 6 (lower is better)
Translates to: GLKPGLGPLLTQ*PPPFLDDFSGE
Trigger: TTCACCACTGAAGTCATCCAGGAACGGCGGCGGGCACTGCGTCAGCAGGGGGCCGAGGCCTGGCTTAAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS CAA 72 bp TCCGTGCGCAGTATGAGCTCCGGCTTCCGCCGCACCTaGCGCGTTCGGTCCACGCTCAGGCGGAAACGTAGC +
Preference number: 6 (lower is better)
Translates to: SVRSMSSGFRRT*RVRSTLRRKRS
Trigger: GCTACGTTTCCGCCTGAGCGTGGACCGAACGCGCAAGGTGCGGCGGAAGCCGGAGCTCATACTGCGCACGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS CAA 90 bp AGCCCGTTCTCCGTGCGCAGTATGAGCTCCGGCTTCCGCCGCACCTaGCGCGTTCGGTCCACGCTCAGGCGGAAACGTAGCAGTGTTAGT +
Preference number: 6 (lower is better)
Translates to: SPFSVRSMSSGFRRT*RVRSTLRRKRSSVS
Trigger: ACTAACACTGCTACGTTTCCGCCTGAGCGTGGACCGAACGCGCAAGGTGCGGCGGAAGCCGGAGCTCATACTGCGCACGGAGAACGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS TCA 72 bp GCCGGAACCTCCGCCCATCCGCCGAGCGGTAGTAAATaGAGTCGAGGTAGTGGTGCAAGCGATACTGGCGCC +
Preference number: 6 (lower is better)
Translates to: AGTSAHPPSGSK*SRGSGASDTGA
Trigger: GGCGCCAGTATCGCTTGCACCACTACCTCGACTTCATTTACTACCGCTCGGCGGATGGGCGGAGGTTCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS GCA 72 bp AGAGCAGGAAGAGGAGAAGGGTGGACACCGCGTATATaGGGAACGCCGTCTTCTCCAGCCCCAGGAGGTGCA +
Preference number: 6 (lower is better)
Translates to: RAGRGEGWTPRI*GTPSSPAPGGA
Trigger: TGCACCTCCTGGGGCTGGAGAAGACGGCGTTCCGCATATACGCGGTGTCCACCCTTCTCCTCTTCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS GCA 72 bp TATATGCGGAACGCCGTCTTCTCCAGCCCCAGGAGGTaGAGCAGGCGGTCTGTGATGGGCAGCATCCTGTTT +
Preference number: 6 (lower is better)
Translates to: YMRNAVFSSPRR*SRRSVMGSILF
Trigger: AAACAGGATGCTGCCCATCACAGACCGCCTGCTGCACCTCCTGGGGCTGGAGAAGACGGCGTTCCGCATATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS CCA 72 bp ATGCGCCCATCTGGGAGCTTGATGTCCTCCGTGCATTaGCGAGAGACAAGAGTGACAGGTGGGTACTGGCGC +
Preference number: 6 (lower is better)
Translates to: MRPSGSLMSSVH*RETRVTGGYWR
Trigger: GCGCCAGTACCCACCTGTCACTCTTGTCTCTCGCCAATGCACGGAGGACATCAAGCTCCCAGATGGGCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS CCA 72 bp GCAGTGTTAGTGCCACAACCACGCGCAACTCGGCCATaGCGAAGCTCTGTCCGATGCAATTCCTGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: AVLVPQPRATRP*RSSVRCNSWVL
Trigger: CAGGACCCAGGAATTGCATCGGACAGAGCTTCGCCATGGCCGAGTTGCGCGTGGTTGTGGCACTAACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS CAA 72 bp GATGCGCCCATCTGGGAGCTTGATGTCCTCCGTGCATaGGCGAGAGACAAGAGTGACAGGTGGGTACTGGCG +
Preference number: 6 (lower is better)
Translates to: DAPIWELDVLRA*ARDKSDRWVLA
Trigger: CGCCAGTACCCACCTGTCACTCTTGTCTCTCGCCAATGCACGGAGGACATCAAGCTCCCAGATGGGCGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS TCA 72 bp TCCAGCTCCTCCAGCTCCCGGCCTTTCATGACTTCCTaGATCTCTTCTCGGCATTTCTCCTGGTATTCCGGA +
Preference number: 6 (lower is better)
Translates to: SSSSSSRPFMTS*ISSRHFSWYSG
Trigger: TCCGGAATACCAGGAGAAATGCCGAGAAGAGATTCAGGAAGTCATGAAAGGCCGGGAGCTGGAGGAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS CAA 90 bp TACCAAGAGTACATGGTGCATGTTGTCCAGTACCTTCTTCTCATCTaGAAGGCCCGCCTCATTTGGAAGGTACATGCCCAGGTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: YQEYMVHVVQYLLLI*KARLIWKVHAQVAQ
Trigger: CTGGGCCACCTGGGCATGTACCTTCCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGTACTGGACAACATGCACCATGTACTCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS TCA 72 bp ACATGGTGCATGTTGTCCAGTACCTTCTTCTCATCTTaGAGGCCCGCCTCATTTGGAAGGTACATGCCCAGG +
Preference number: 6 (lower is better)
Translates to: TWCMLSSTFFSS*RPASFGRYMPR
Trigger: CCTGGGCATGTACCTTCCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGTACTGGACAACATGCACCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS CAA 72 bp TACATGGTGCATGTTGTCCAGTACCTTCTTCTCATCTaGAAGGCCCGCCTCATTTGGAAGGTACATGCCCAG +
Preference number: 6 (lower is better)
Translates to: YMVHVVQYLLLI*KARLIWKVHAQ
Trigger: CTGGGCATGTACCTTCCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGTACTGGACAACATGCACCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269703.8
ENST00000601005.2
CDS CAA 90 bp TGCAGCAGGCGGTCTGTGATGGGCAGCATCCTGTTTTCAATTCTTTaGGGTTCACTGTCTTCTTCCTTGCTGGTATTTTCTGTTATTACT +
Preference number: 6 (lower is better)
Translates to: CSRRSVMGSILFSIL*GSLSSSLLVFSVIT
Trigger: AGTAATAACAGAAAATACCAGCAAGGAAGAAGACAGTGAACCCAAAAGAATTGAAAACAGGATGCTGCCCATCACAGACCGCCTGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269703.8
CDS CAA 72 bp CGGTCTGTGATGGGCAGCATCCTGTTTTCAATTCTTTaGGGTTCACTGTCTTCTTCCTTGCTGGTATTTTCT +
Preference number: 6 (lower is better)
Translates to: RSVMGSILFSIL*GSLSSSLLVFS
Trigger: AGAAAATACCAGCAAGGAAGAAGACAGTGAACCCAAAAGAATTGAAAACAGGATGCTGCCCATCACAGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269703.8