Pregenerated sensors for CYP4F2 (Homo sapiens)
Ensembl gene IDs: ENSG00000186115Ensembl transcript IDs: ENST00000011989.11, ENST00000221700.11, ENST00000589654.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCGCTATaGATCTCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: LSPTSPQLLKATNPL*ISSDWPVLEISYKR Trigger: CCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGAGATGCATAGCGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| 3UTR-3UTR GCA 90 bp | TACCACGAAATTCACCATTTCAAAGTGTCCAATTCAATAGCATTTAGTGCACTCGCCACCAATCCGCTATaGATCTCTTCAGATTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: YHEIHHFKVSNSIAFSALATNPL*ISSDWP Trigger: AGGCCAATCTGAAGAGATGCATAGCGGATTGGTGGC...GAGTGCACTAAATGCTATTGAATTGGACACTTTGAAATGGTGAATTTCGTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| 3UTR-3UTR GCA 90 bp | ACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATGCATTCAAGTGTAGTAGGGATCACTaGTTCATTCCTTTTTATGGC | + |
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Preference number: 2 (lower is better) Translates to: TLCDLLHLTSFIQYHAFKCSRDH*FIPFYG Trigger: GCCATAAAAAGGAATGAAGCAGTGATCCCTACTACA...CTTGAATGCATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| 3UTR-3UTR CCA 90 bp | ACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATGCATTCAAGAGTAGATATCTAGGATaGAATACAGGACTGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TLCDLLHLTSFIQYHAFKSRYLG*NTGLWN Trigger: GTTCCACAGTCCTGTATTCCATCCTAGATATCTACT...CTTGAATGCATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| 3UTR-3UTR CCA 90 bp | ACACTTGTCTCAATTATTTTGAGTAGATATCTAGGATGGAATACAGGACTGTGGAGTAGATATCTAGGATaGAATACAGGACTGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TLVSIILSRYLGWNTGLWSRYLG*NTGLWN Trigger: GTTCCACAGTCCTGTATTCCATCCTAGATATCTACT...CCACAGTCCTGTATTCCATCCTAGATATCTACTCAAAATAATTGAGACAAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000011989.11 ENST00000221700.11 ENST00000589654.2 |
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| 3UTR-3UTR CCA 90 bp | ATTATTTTGAGTAGATATCTAGGATGGAATACAGGACTGTGGAACAGGGTCTTAAGTAGATATCTAGGATaGAATACAGGACTGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: IILSRYLGWNTGLWNRVLSRYLG*NTGLWN Trigger: GTTCCACAGTCCTGTATTCCATCCTAGATATCTACT...TAAGACCCTGTTCCACAGTCCTGTATTCCATCCTAGATATCTACTCAAAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000011989.11 ENST00000221700.11 ENST00000589654.2 |
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| 3UTR TCA 72 bp | AGCAGTCGCTCCTCAGTCCCACCTCCCCACAGCTGCTaGAAGCCACCAATCCGCTATGCATCTCTTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: SSRSSVPPPHSC*KPPIRYASLQI Trigger: AATCTGAAGAGATGCATAGCGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGCGACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| 3UTR GCA 72 bp | ACCTCCCCACAGCTGCTGAAAGCCACCAATCCGCTATaGATCTCTTCAGATTGGCCTGTTCTGGAAATTTCG | + |
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Preference number: 3 (lower is better) Translates to: TSPQLLKATNPL*ISSDWPVLEIS Trigger: CGAAATTTCCAGAACAGGCCAATCTGAAGAGATGCATAGCGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| 3UTR CCA 72 bp | CTGAAAGCCACCAATCCGCTATGCATCTCTTCAGATTaGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTA | + |
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Preference number: 3 (lower is better) Translates to: LKATNPLCISSD*PVLEISYKRTV Trigger: TACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGAGATGCATAGCGGATTGGTGGCTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCGCTATGCATCAGCCAAGGGGATGCTaGCACTGGCCAGAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: APQSHLPTAAESHQSAMHQPRGC*HWPEAQ Trigger: CTGGGCCTCTGGCCAGTGGCAGCATCCCCTTGGCTG...ATGCATAGCGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| CDS-3UTR TCA 90 bp | GCTCCTCAGTCCCACCTCCCCACAGCTGCTGAAAGCCACCAATCCGCTATGCATCACACAGCTGGGTTGTaGTGGGTTCCGAAAACACTG | + |
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Preference number: 4 (lower is better) Translates to: APQSHLPTAAESHQSAMHHTAGL*WVPKTL Trigger: CAGTGTTTTCGGAACCCATCACAACCCAGCTGTGTG...ATGCATAGCGGATTGGTGGCTTTCAGCAGCTGTGGGGAGGTGGGACTGAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | CGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTAGTAGGGATCCGAACGTCTGCCCGATaGAGTTCCTGGGCCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: RLSFSIMHSRFIHSVVGIRTSAR*SSWALP Trigger: CGGCAGGGCCCAGGAACTGCATCGGGCAGACGTTCG...GATCCCTACTACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | AATCCGCTATGCATCTCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGGGTCCAGGCCAGGACATaGGCCAGGAGCCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: NPLCISSDWPVLEISYKRVQART*ARSQEA Trigger: GGCCTCCTGGCTCCTGGCCCATGTCCTGGCCTGGAC...CCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGAGATGCATAGCGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | CCAATCCGCTATGCATCTCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGAGCAGCCAAGGGGATaGTGCCACTGGCCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PIRYASLQIGLFWKFRIKEQPRG*CHWPEA Trigger: GGCCTCTGGCCAGTGGCAGCATCCCCTTGGCTGCTC...TTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGAGATGCATAGCGGATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | ACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATGCATTCAAGGTCCAGGCCAGGACATaGGCCAGGAGCCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLCDLLHLTSFIQYHAFKVQART*ARSQEA Trigger: GGCCTCCTGGCTCCTGGCCCATGTCCTGGCCTGGAC...CTTGAATGCATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGCAGCCAAGGGGATGCTaGCACTGGCCAGAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSDWPVLEISYKRTVHYVQPRGC*HWPEAQ Trigger: CTGGGCCTCTGGCCAGTGGCAGCATCCCCTTGGCTG...CACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGGAGCAGCCAAGGGGATaGTGCCACTGGCCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSDWPVLEISYKRTVHYVEQPRG*CHWPEA Trigger: GGCCTCTGGCCAGTGGCAGCATCCCCTTGGCTGCTC...CACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR TCA 90 bp | CGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTAGTAGGGATCCCTCCCCACAGCTGCTaGAAGCCACCAATCCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: RLSFSIMHSRFIHSVVGIPPHSC*KPPIRY Trigger: ATAGCGGATTGGTGGCTTTCAGCAGCTGTGGGGAGG...GATCCCTACTACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR TCA 90 bp | ACACTTGTCTCAATTATTTTGAGTAGATATCTAGGATGGAATACAGGACTGTGGCCTCCTCTGTGGGGTTaGCCATGCCCTGGTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TLVSIILSRYLGWNTGLWPPLWG*PCPGVP Trigger: GGGGACACCAGGGCATGGTCAACCCCACAGAGGAGG...CCACAGTCCTGTATTCCATCCTAGATATCTACTCAAAATAATTGAGACAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | ACACTTGTCTCAATTATTTTGAGTAGATATCTAGGATGGAATACAGGACTGTGGCGAACGTCTGCCCGATaGAGTTCCTGGGCCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TLVSIILSRYLGWNTGLWRTSAR*SSWALP Trigger: CGGCAGGGCCCAGGAACTGCATCGGGCAGACGTTCG...CCACAGTCCTGTATTCCATCCTAGATATCTACTCAAAATAATTGAGACAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000011989.11 ENST00000221700.11 ENST00000589654.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGACCTTTTGCGTGGGGAGAAAGATGTaGATGACTGCCTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WPVLEISYKRTVHYVTFCVGRKM*MTACQG Trigger: GCCCTGGCAGGCAGTCATCCACATCTTTCTCCCCAC...GCAAAAGGTCACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000011989.11 |
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| CDS-3UTR TCA 90 bp | AAGGACAGTACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATCCTCCCCACAGCTGCTaGAAGCCACCAATCCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: KDSTLCDLLHLTSFIQYHPPHSC*KPPIRY Trigger: ATAGCGGATTGGTGGCTTTCAGCAGCTGTGGGGAGG...ATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGTACTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR TCA 90 bp | GATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGACCTTTTGGTGCAATGGCAGCTaGGGCGTTGATGACAGACCG | + |
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Preference number: 4 (lower is better) Translates to: DWPVLEISYKRTVHYVTFWCNGS*GVDDRP Trigger: CGGTCTGTCATCAACGCCTCAGCTGCCATTGCACCA...AAAGGTCACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | GATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGACCTTTTCTGAGGCCAGGAGCTaGCACTTGGCGTGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: DWPVLEISYKRTVHYVTFSEARS*HLACMM Trigger: CATCATGCACGCCAAGTGGCAGCTCCTGGCCTCAGA...AAAGGTCACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | ATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTAGTAGGGATCACTGCTTCGCCACCAATCCGCTATaGATCTCTTCAGATTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: IQYHAFKVHPQCSRDHCFATNPL*ISSDWP Trigger: AGGCCAATCTGAAGAGATGCATAGCGGATTGGTGGC...GAAGCAGTGATCCCTACTACACTGTGGATGAACCTTGAATGCATGATACTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR TCA 90 bp | TCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGCACACAGCTGGGTTGTaGTGGGTTCCGAAAACACTG | + |
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Preference number: 4 (lower is better) Translates to: SSDWPVLEISYKRTVHYVHTAGL*WVPKTL Trigger: CAGTGTTTTCGGAACCCATCACAACCCAGCTGTGTG...CACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR TCA 90 bp | GATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGACCTTTGAGGAAACCCCATACTaGTTAGCAGTCGCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DWPVLEISYKRTVHYVTFEETPY*LAVAPQ Trigger: CTGAGGAGCGACTGCTAATCAGTATGGGGTTTCCTC...AAAGGTCACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | AATCCGCTATGCATCTCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGGGCCACCAATCCGCTATaGATCTCTTCAGATTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NPLCISSDWPVLEISYKRATNPL*ISSDWP Trigger: AGGCCAATCTGAAGAGATGCATAGCGGATTGGTGGC...CCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGAGATGCATAGCGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | ATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTAGTAGGGATCACTGCTTCCGGCAATATATTCACTaGGTTTCTCCTGACAATGGC | + |
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Preference number: 4 (lower is better) Translates to: IQYHAFKVHPQCSRDHCFRQYIH*VSPDNG Trigger: GCCATTGTCAGGAGAAACCCAGTGAATATATTGCCG...GAAGCAGTGATCCCTACTACACTGTGGATGAACCTTGAATGCATGATACTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | GATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGACCTTTCGGCAATATATTCACTaGGTTTCTCCTGACAATGGC | + |
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Preference number: 4 (lower is better) Translates to: DWPVLEISYKRTVHYVTFRQYIH*VSPDNG Trigger: GCCATTGTCAGGAGAAACCCAGTGAATATATTGCCG...AAAGGTCACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | AATCCGCTATGCATCTCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGGAGTAGATATCTAGGATaGAATACAGGACTGTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: NPLCISSDWPVLEISYKRSRYLG*NTGLWN Trigger: GTTCCACAGTCCTGTATTCCATCCTAGATATCTACT...CCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGAGATGCATAGCGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | CGTCTTTCATTCAGTATCATGCATTCAAGGTTCATCCACAGTGTAGTAGGGATCCAGATTGGCCTGTTCTaGAAATTTCGTATAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RLSFSIMHSRFIHSVVGIQIGLF*KFRIKG Trigger: TCCTTTTATACGAAATTTCCAGAACAGGCCAATCTG...GATCCCTACTACACTGTGGATGAACCTTGAATGCATGATACTGAATGAAAGACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | AAGGACAGTACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATTGTAGTAGGGATCACTaGTTCATTCCTTTTTATGGC | + |
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Preference number: 4 (lower is better) Translates to: KDSTLCDLLHLTSFIQYHCSRDH*FIPFYG Trigger: GCCATAAAAAGGAATGAAGCAGTGATCCCTACTACA...ATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGTACTGTCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | AAGGACAGTACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATAGTAGATATCTAGGATaGAATACAGGACTGTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KDSTLCDLLHLTSFIQYHSRYLG*NTGLWN Trigger: GTTCCACAGTCCTGTATTCCATCCTAGATATCTACT...ATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGTACTGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR GCA 90 bp | TACCACGAAATTCACCATTTCAAAGTGTCCAATTCAATAGCATTTAGTGCACTCTGTAGTAGGGATCACTaGTTCATTCCTTTTTATGGC | + |
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Preference number: 4 (lower is better) Translates to: YHEIHHFKVSNSIAFSALCSRDH*FIPFYG Trigger: GCCATAAAAAGGAATGAAGCAGTGATCCCTACTACA...GAGTGCACTAAATGCTATTGAATTGGACACTTTGAAATGGTGAATTTCGTGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| CDS-3UTR CCA 90 bp | ACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATGCATTCAAGCAGATTGGCCTGTTCTaGAAATTTCGTATAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TLCDLLHLTSFIQYHAFKQIGLF*KFRIKG Trigger: TCCTTTTATACGAAATTTCCAGAACAGGCCAATCTG...CTTGAATGCATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CAA 90 bp | GATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGACCTTTCCCTCCTCTGTGGGGTaGACCATGCCCTGGTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: DWPVLEISYKRTVHYVTFPSSVG*TMPWCP Trigger: GGGACACCAGGGCATGGTCAACCCCACAGAGGAGGG...AAAGGTCACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221700.11 |
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| CDS-3UTR CAA 90 bp | ACACTATGTGACCTTTTGCATCTGACGTCTTTCATTCAGTATCATGCATTCAAGGCCAGGAGCTGCCACTaGGCGTGCATGATGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: TLCDLLHLTSFIQYHAFKARSCH*ACMMFT Trigger: TGTGAACATCATGCACGCCAAGTGGCAGCTCCTGGC...CTTGAATGCATGATACTGAATGAAAGACGTCAGATGCAAAAGGTCACATAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CAA 90 bp | ATTATTTTGAGTAGATATCTAGGATGGAATACAGGACTGTGGAACAGGGTCTTAGCCAGGAGCTGCCACTaGGCGTGCATGATGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: IILSRYLGWNTGLWNRVLARSCH*ACMMFT Trigger: TGTGAACATCATGCACGCCAAGTGGCAGCTCCTGGC...TAAGACCCTGTTCCACAGTCCTGTATTCCATCCTAGATATCTACTCAAAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CAA 90 bp | TCTTCAGATTGGCCTGTTCTGGAAATTTCGTATAAAAGGACAGTACACTATGTGTTCCCGTCTTCATCCTaGCTCAGCAGGAGTACATCA | + |
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Preference number: 5 (lower is better) Translates to: SSDWPVLEISYKRTVHYVFPSSS*LSRSTS Trigger: TGATGTACTCCTGCTGAGCAAGGATGAAGACGGGAA...CACATAGTGTACTGTCCTTTTATACGAAATTTCCAGAACAGGCCAATCTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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| CDS-3UTR CAA 90 bp | ACACTTGTCTCAATTATTTTGAGTAGATATCTAGGATGGAATACAGGACTGTGGTTCCCGTCTTCATCCTaGCTCAGCAGGAGTACATCA | + |
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Preference number: 5 (lower is better) Translates to: TLVSIILSRYLGWNTGLWFPSSS*LSRSTS Trigger: TGATGTACTCCTGCTGAGCAAGGATGAAGACGGGAA...CCACAGTCCTGTATTCCATCCTAGATATCTACTCAAAATAATTGAGACAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000011989.11 ENST00000221700.11 |
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