RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP4B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000142973

Ensembl transcript IDs: ENST00000271153.8, ENST00000371919.8, ENST00000371923.9, ENST00000413093.2, ENST00000452782.6, ENST00000464439.6, ENST00000468637.3, ENST00000481248.1, ENST00000526297.5, ENST00000529715.5, ENST00000534708.6, ENST00000546128.5, ENST00000614163.4, ENST00000640628.1

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGGACACAAGGCGCTGCTGCATCAACAGAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTCCCTGTGGCCCAGGCCGGTGTCTCC +
Preference number: 1 (lower is better)
Translates to: EGHKALLHQQSEIAD*KVVAAVPVAQAGVS
Trigger: GGAGACACCGGCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAGTCAGCGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR GCA 90 bp CCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGACCTGGTCTGTATGGTCATGGGCCAC +
Preference number: 1 (lower is better)
Translates to: PPVLDLLPHLLILQG*LPLPDDLVCMVMGH
Trigger: GTGGCCCATGACCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR CCA 90 bp CAAGGGCTGAGCAGGATAAACCGGGCCCACCCTCAGACTCACCACTaGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTA +
Preference number: 1 (lower is better)
Translates to: QGLSRINRAHPQTHH*KKSWSPRISRTSSL
Trigger: TAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGTGAGTCTGAGGGTGGGCCCGGTTTATCCTGCTCAGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR TCA 90 bp GGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTaGTGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCA +
Preference number: 1 (lower is better)
Translates to: GGESHSWSAGQAGAS*WAAVRGPERTQSGA
Trigger: TGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
3UTR GCA 90 bp TCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: SSSSRAPRRMSRKSR*LRFWIFFRTFSSCR
Trigger: CCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR TCA 90 bp CCCTGTGGCCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAA +
Preference number: 1 (lower is better)
Translates to: PCGPGRCLLFQRCTS*VCSAPCDPHRRRCQ
Trigger: TTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGGCCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR TCA 90 bp TCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATGTCAAAGGACTTACCCTCCCGAGCT +
Preference number: 1 (lower is better)
Translates to: SPLPKVHFMSVFSAM*PTSQKMSKDLPSRA
Trigger: AGCTCGGGAGGGTAAGTCCTTTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCCCTCCACACCCAGCCTaGGGAGGGTGGTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLPPHPA*GGWCPG
Trigger: CCCTGGGCACCACCCTCCCCAGGCTGGGTGTGGAGG...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR CCA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR TCA 90 bp CCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGAGGGAGGTCACAGCCTaGGCCATCTGGGACCCCATT +
Preference number: 2 (lower is better)
Translates to: PAGRDRPSTKVTGLLSWRREVTA*AIWDPI
Trigger: AATGGGGTCCCAGATGGCTCAGGCTGTGACCTCCCT...CCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCCCAGCCTGGGGAGGGTaGTGCCCAGGGAGGTCACAG +
Preference number: 2 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLPAWGG*CPGRSQ
Trigger: CTGTGACCTCCCTGGGCACCACCCTCCCCAGGCTGG...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR CCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCCTCCACACCCAGCCTaGGGAGGGTGGTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLPPHPA*GGWCPG
Trigger: CCCTGGGCACCACCCTCCCCAGGCTGGGTGTGGAGG...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR CCA 90 bp ATAGAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCCCAGCCTGGGGAGGGTaGTGCCCAGGGAGGTCACAG +
Preference number: 2 (lower is better)
Translates to: IEIRLPAGRDRPSTKVTGPAWGG*CPGRSQ
Trigger: CTGTGACCTCCCTGGGCACCACCCTCCCCAGGCTGG...GCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR CCA 90 bp CTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACCCAGGGCCCGAGCGCAGGACAAGCTaGGGCATCTTGATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: LSHLGPHSHQSYFPDPGPERRTS*GILMGS
Trigger: GCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTC...GGGCCCTGGGTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR GCA 90 bp ATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGCTGCAAGGTAGTAGCTaGTGTCCCTGTGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: ISRTSSLQRCWCSGYRAMLQGSS*CPCGPG
Trigger: GCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAG...CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR CCA 90 bp GGTCACAGCCTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACCACCTGGGGCACAGGTaGGTAGAGGCGGAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: GHSLSHLGPHSHQSYFPDHLGHR*VEAEAL
Trigger: GAGAGCTTCCGCCTCTACCCACCTGTGCCCCAGGTG...GTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAGGCTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR CCA 90 bp TGGCCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCAGCCACCTGGGGCACAGGTaGGTAGAGGCGGAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: WPRPVSPLPKVHFMSVFSHLGHR*VEAEAL
Trigger: GAGAGCTTCCGCCTCTACCCACCTGTGCCCCAGGTG...GCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR CCA 90 bp ATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCAAGCACATGGCTGAGCGCAGGACAAGCTaGGGCATCTTGATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: MGSREGSRENSKRSKHMAERRTS*GILMGS
Trigger: GCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTC...AGCCATGTGCTTGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
3UTR-3UTR TCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCAGGGAGGTCACAGCCTaGGCCATCTGGGACCCCATT +
Preference number: 2 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLREVTA*AIWDPI
Trigger: AATGGGGTCCCAGATGGCTCAGGCTGTGACCTCCCT...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR TCA 90 bp CAGTGGCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGAAACTACAAGCCTCCTaGAGGCAGGGGGCCCCAACT +
Preference number: 2 (lower is better)
Translates to: QWLQVEVKAILGAQDKLGKLQAS*RQGAPT
Trigger: AGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTT...CCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR TCA 90 bp CCAGGATGGTTCAGGACAGGATGGGCATCGCCCTTCCCAAGGGCTGAGCAGGATAATGAAAGCCAGGTGTaGGCAGCTTGCGGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: PGWFRTGWASPFPRAEQDNESQV*AACGAA
Trigger: TGCAGCACCGCAAGCTGCTCACACCTGGCTTTCATT...ATCCTGCTCAGCCCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCATCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR GCA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp GAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: EIRLPAGRDRPSTKVTGLTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...CAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp GATGTCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: DVIFIPGTQENVQEVQVPAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...AGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR CCA 90 bp CACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGAGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: HWKKSWSPRISRTSSLQRAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...TCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp CTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACCCAGGGCCCGGTGAAAGCCATTCTTaGAGCGCAGGACAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LSHLGPHSHQSYFPDPGPGESHS*SAGQAG
Trigger: CCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACC...GGGCCCTGGGTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR CCA 90 bp TCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGGGGTGGCAGCAGTTCTTaGCTGAGTGAGCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: SSSSRAPRRMSRKSRCLRGGSSS*LSELLP
Trigger: AGGAAGGAGCTCACTCAGCCAAGAACTGCTGCCACC...CCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR CCA 90 bp GATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGAAGCGGCGGCCATGTaGGGTGAGCCAGTAGATGAA +
Preference number: 2 (lower is better)
Translates to: DLADLLSTTMLVLRVQGHEAAAM*GEPVDE
Trigger: TTCATCTACTGGCTCACCCCACATGGCCGCCGCTTC...ATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR TCA 90 bp TCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGGGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 2 (lower is better)
Translates to: SSSSRAPRRMSRKSRCLRGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...CCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR TCA 90 bp AGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGTCATGGGCCACCTGGCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 2 (lower is better)
Translates to: RAAFRSLMTWSVWSWATWQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...CCAGGTGGCCCATGACCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR GCA 90 bp AGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTCAGCAGCTTGCGGTGCTaGAACCACTTGGGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: RVQGHAVEKPGDTTGGGVSSLRC*NHLGPS
Trigger: TGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCT...GACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR GCA 90 bp CACCTGATTTCCAGGATGGTTCAGGACAGGATGGGCATCGCCCTTCCCAAGGGCTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 2 (lower is better)
Translates to: HLISRMVQDRMGIALPKGSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...GCCCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCATCCTGGAAATCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR CCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
3UTR-3UTR TCA 90 bp CCCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 2 (lower is better)
Translates to: PTGRSPGPLGSRGPPLYNGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...GTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR TCA 90 bp AGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTCGGCTTCAGGTGGAGGTaGAAGCCATTCTTGGAGCGC +
Preference number: 2 (lower is better)
Translates to: RVQGHAVEKPGDTTGGGVGFRWR*KPFLER
Trigger: GCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCC...GACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614163.4
3UTR-3UTR TCA 90 bp GTCCAGGTGCCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGGGCCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 2 (lower is better)
Translates to: VQVPPVLDLLPHLLILQGQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...GCCCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR GCA 90 bp CACCTGATTTCCAGGATGGTTCAGGACAGGATGGGCATCGCCCTTCCCAAGGGCGACACAAGGCGCTGCTaGATCAACAGAGTGAGATCG +
Preference number: 2 (lower is better)
Translates to: HLISRMVQDRMGIALPKGDTRRC*INRVRS
Trigger: CGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTC...GCCCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCATCCTGGAAATCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR TCA 90 bp GGTCACAGCCTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 2 (lower is better)
Translates to: GHSLSHLGPHSHQSYFPDGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...GTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAGGCTGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR GCA 90 bp ATCGCAGAAGATGTCAAAGGACTTACCCTCCCGAGCTTTCTCTTCCCACTTGTCGTGAGCAGCTTGCGGTaGTGCAACCACTTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: IAEDVKGLTLPSFLFPLVVSSLR*CNHLGP
Trigger: GGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCAC...GACAAGTGGGAAGAGAAAGCTCGGGAGGGTAAGTCCTTTGACATCTTCTGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR GCA 90 bp AGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: SPGPLGSRGPPLYNDAGASEIAD*KVVAAV
Trigger: GACAGCAGCTACTACCTTGCAGTCAGCGATCTCACT...AGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR GCA 90 bp ACCTTCTCATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGAAGGACACAAGGCGCTaGTGCATCAACAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: TFSSCRAAFRSLMTWSVWKDTRR*CINRVR
Trigger: TCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTT...CCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR CCA 90 bp GTGTCCACTTCAGCCCGGAGGTCTGCATCTGACAGTTTGATGTCATCTTCATCCACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: VSTSARRSASDSLMSSSSTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...GGATGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTGAAGTGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR GCA 90 bp CACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGAGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: HWKKSWSPRISRTSSLQRGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...TCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCCAGCCTGGGGAGGGTaGTGCCCAGGGAGGTCACAG +
Preference number: 2 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVPAWGG*CPGRSQ
Trigger: CTGTGACCTCCCTGGGCACCACCCTCCCCAGGCTGG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR CCA 90 bp TCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGGCAAAGGGATGGCGTTTaGATGCATTCTCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: SSSSRAPRRMSRKSRCLRQRDGV*MHSQWK
Trigger: TTTCCACTGAGAATGCATCCAAACGCCATCCCTTTG...CCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR CCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATAGACCCAGGGCCCAGTaGCTTCAGGTGGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYRPRAQ*LQVEVK
Trigger: TTTCACCTCCACCTGAAGCCACTGGGCCCTGGGTCT...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp ACCTTCTCATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGAAGTCATTATGGTACTaGAAGGACACAAGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: TFSSCRAAFRSLMTWSVWKSLWY*KDTRRC
Trigger: GCAGCGCCTTGTGTCCTTCCAGTACCATAATGACTT...CCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR GCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 2 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR GCA 90 bp AGAGTCAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATATCCTCTCTACAACGATaGTGGTGCTCAGGGTACAGG +
Preference number: 2 (lower is better)
Translates to: RVKDLRVGPYSTVPMEGISSLQR*WCSGYR
Trigger: CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGA...TATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR TCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGAGGGAGGTCACAGCCTaGGCCATCTGGGACCCCATT +
Preference number: 2 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMREVTA*AIWDPI
Trigger: AATGGGGTCCCAGATGGCTCAGGCTGTGACCTCCCT...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR GCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATGACACAAGGCGCTGCTaGATCAACAGAGTGAGATCG +
Preference number: 2 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYDTRRC*INRVRS
Trigger: CGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTC...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR CCA 90 bp CAGTGGCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATTCTTCTATTTGGTaGTACCCAGCCATAACCATG +
Preference number: 2 (lower is better)
Translates to: QWLQVEVKAILGAQDKLGHSSIW*YPAITM
Trigger: CATGGTTATGGCTGGGTACCACCAAATAGAAGAATG...CCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR CCA 90 bp TGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCCAAAGGGATGGCGTTTaGATGCATTCTCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: WKKSWSPRISRTSSLQRCQRDGV*MHSQWK
Trigger: TTTCCACTGAGAATGCATCCAAACGCCATCCCTTTG...GCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp AGAGTCAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATACAAAGGGATGGCGTTTaGATGCATTCTCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: RVKDLRVGPYSTVPMEGIQRDGV*MHSQWK
Trigger: TTTCCACTGAGAATGCATCCAAACGCCATCCCTTTG...TATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp ACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATATAAAGGCAAAGGGATaGCGTTTGGATGCATTCTCA +
Preference number: 2 (lower is better)
Translates to: TGRSPGPLGSRGPPLYNDIKAKG*RLDAFS
Trigger: TGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT...ATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR TCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATTCCTTGTGCTCACTATaGGTCTCTAAGGTTGGAATG +
Preference number: 2 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHSLCSL*VSKVGM
Trigger: CATTCCAACCTTAGAGACTCATAGTGAGCACAAGGA...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR GCA 90 bp CCATACAGCACTGTTCCTATGGAGGGCATAGATATGCATAGAGATCAGGCTTCCGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: PYSTVPMEGIDMHRDQASGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...GGAAGCCTGATCTCTATGCATATCTATGCCCTCCATAGGAACAGTGCTGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp AGAGTCAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAATAAAGGCAAAGGGATaGCGTTTGGATGCATTCTCA +
Preference number: 2 (lower is better)
Translates to: RVKDLRVGPYSTVPMEGIIKAKG*RLDAFS
Trigger: TGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT...TATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CCA 90 bp ATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAGAGATAAAGGCAAAGGGATaGCGTTTGGATGCATTCTCA +
Preference number: 2 (lower is better)
Translates to: IKAKGWRLDAFSVEKRREIKAKG*RLDAFS
Trigger: TGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT...CTCTCTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR CCA 72 bp AGCAGGATAAACCGGGCCCACCCTCAGACTCACCACTaGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACC +
Preference number: 3 (lower is better)
Translates to: SRINRAHPQTHH*KKSWSPRISRT
Trigger: GGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGTGAGTCTGAGGGTGGGCCCGGTTTATCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR CAA 90 bp GGTCACAGCCTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACACAAGCTGGGGCATCTaGATGGGCAGCCGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: GHSLSHLGPHSHQSYFPDTSWGI*MGSREG
Trigger: CCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTGT...GTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAGGCTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR CAA 90 bp TGGCCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCAGCCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGC +
Preference number: 3 (lower is better)
Translates to: WPRPVSPLPKVHFMSVFSRCCNH*GPSRTS
Trigger: GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCG...GCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR-3UTR CAA 90 bp AGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCCAGGTGTGAGCAGCTaGCGGTGCTGCAACCACTTG +
Preference number: 3 (lower is better)
Translates to: SPGPLGSRGPPLYNDAGAPGVSS*RCCNHL
Trigger: CAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGG...AGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR GCA 72 bp AAGGCGCTGCTGCATCAACAGAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTCCCTGTGGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: KALLHQQSEIAD*KVVAAVPVAQA
Trigger: GGCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAGTCAGCGATCTCACTCTGTTGATGCAGCAGCGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR GCA 72 bp TCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCA +
Preference number: 3 (lower is better)
Translates to: SRAPRRMSRKSR*LRFWIFFRTFS
Trigger: TGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR TCA 72 bp AGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTaGTGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAA +
Preference number: 3 (lower is better)
Translates to: SHSWSAGQAGAS*WAAVRGPERTQ
Trigger: TTGAGTTCTCTCTGGACCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
3UTR GCA 72 bp CTGGATCTTCTTCCGCACCTTCTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGACCTGGTCTGTATGGTC +
Preference number: 3 (lower is better)
Translates to: LDLLPHLLILQG*LPLPDDLVCMV
Trigger: GACCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR TCA 72 bp CCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGTGACCCACATCGCAGA +
Preference number: 3 (lower is better)
Translates to: PGRCLLFQRCTS*VCSAPCDPHRR
Trigger: TCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR CAA 90 bp ATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTGGGCTTTCTCTTCCCACTaGTCCAGCATGATACGTGTA +
Preference number: 3 (lower is better)
Translates to: IHKGDRLAELAVHLGHRWAFSSH*SSMIRV
Trigger: TACACGTATCATGCTGGACAAGTGGGAAGAGAAAGC...CCACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR-3UTR CAA 90 bp TGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCGCAAAGGGATGGCGTTaGGATGCATTCTCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: WKKSWSPRISRTSSLQRCAKGWR*DAFSVE
Trigger: TTCCACTGAGAATGCATCCAAACGCCATCCCTTTGC...GCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR TCA 72 bp TGTCCACTTCAGCCCGGAGGTCTGCATCTGACAGTTTaGTGTCATCTTCATCCCGGGCACCCAGGAGAATGT +
Preference number: 3 (lower is better)
Translates to: CPLQPGGLHLTV*CHLHPGHPGEC
Trigger: ACATTCTCCTGGGTGCCCGGGATGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTGAAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR CCA 72 bp GTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTaGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAA +
Preference number: 3 (lower is better)
Translates to: VILPRSSHWKKS*SPRISRTSSLQ
Trigger: TTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CAA 90 bp CCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTATGAGTCTCTAAGGTaGGAATGTAAGTTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: PAGRDRPSTKVTGLLSWRYESLR*ECKFLL
Trigger: CAGCAGAAACTTACATTCCAACCTTAGAGACTCATA...CCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR-3UTR CAA 90 bp CTGTGGCCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCGCTTTCTCTTCCCACTaGTCCAGCATGATACGTGTA +
Preference number: 3 (lower is better)
Translates to: LWPRPVSPLPKVHFMSVFAFSSH*SSMIRV
Trigger: TACACGTATCATGCTGGACAAGTGGGAAGAGAAAGC...GAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR CAA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCAAGCCATTCTTCTATTaGGTGGTACCCAGCCATAAC +
Preference number: 3 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLKPFFY*VVPSHN
Trigger: GTTATGGCTGGGTACCACCAAATAGAAGAATGGCTT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR TCA 72 bp CCAAAGGTGCACTTCATGAGTGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATGTCAAAGGACTTACCC +
Preference number: 3 (lower is better)
Translates to: PKVHFMSVFSAM*PTSQKMSKDLP
Trigger: GGGTAAGTCCTTTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGCACCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
3UTR-3UTR CAA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCTATGAGTCTCTAAGGTaGGAATGTAAGTTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLYESLR*ECKFLL
Trigger: CAGCAGAAACTTACATTCCAACCTTAGAGACTCATA...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR GCA 72 bp AGAGAAGGGCATAAAGGCAAAGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCGCAGAGAGTCAAAGAC +
Preference number: 3 (lower is better)
Translates to: REGHKGKGMAFG*ILSGKAQRVKD
Trigger: GTCTTTGACTCTCTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTATGCCCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
3UTR-3UTR CAA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATTATGAGTCTCTAAGGTaGGAATGTAAGTTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHYESLR*ECKFLL
Trigger: CAGCAGAAACTTACATTCCAACCTTAGAGACTCATA...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR CAA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTAAGCCATTCTTCTATTaGGTGGTACCCAGCCATAAC +
Preference number: 3 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTKPFFY*VVPSHN
Trigger: GTTATGGCTGGGTACCACCAAATAGAAGAATGGCTT...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
3UTR-3UTR CAA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGCAAAGGGATGGCGTTaGGATGCATTCTCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVAKGWR*DAFSVE
Trigger: TTCCACTGAGAATGCATCCAAACGCCATCCCTTTGC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR GCA 90 bp GGTCTGTATGGTCATGGGCCACCTGGCAGGCCCGCAGGAAGCGGCGGCCATGTGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: GLYGHGPPGRPAGSGGHVSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...CACATGGCCGCCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCATACAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp CCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCAGCGCCTGGTCATGGGCCACCTaGCAGGCCCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PRPVSPLPKVHFMSVFSAWSWAT*QARRKR
Trigger: CCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCA...GGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp CCCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACTGGTCATGGGCCACCTaGCAGGCCCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PTGRSPGPLGSRGPPLYNWSWAT*QARRKR
Trigger: CCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCA...GTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: DRPSTKVTGLLSWRYTWGTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...GCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp AGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGTGAGCAGCTTGCGGTaGTGCAACCACTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RDRPSTKVTGLLSWRYTWVSSLR*CNHLGP
Trigger: GGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCAC...CCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTCGCACCTTCTCATCCTaGAGGGCTGCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGRTFSS*RAAFRS
Trigger: GGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCG...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCTGGTCATGGGCCACCTaGCAGGCCCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLWSWAT*QARRKR
Trigger: CCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCA...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTCTTGATGGGCAGCCGTaGGGGGTCCAGAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGLDGQP*GVQREL
Trigger: GAGTTCTCTCTGGACCCCTCACGGCTGCCCATCAAG...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTAGCAGCTTGCGGTGCTaGAACCACTTGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGSSLRC*NHLGPS
Trigger: TGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCT...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CACCTGATTTCCAGGATGGTTCAGGACAGGATGGGCATCGCCCTTCCCAAGGGCGTGAGCAGCTTGCGGTaGTGCAACCACTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HLISRMVQDRMGIALPKGVSSLR*CNHLGP
Trigger: GGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCAC...GCCCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCATCCTGGAAATCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR GCA 90 bp GGTCTGTATGGTCATGGGCCACCTGGCAGGCCCGCAGGAAGCGGCGGCCATGTGAAGGACACAAGGCGCTaGTGCATCAACAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GLYGHGPPGRPAGSGGHVKDTRR*CINRVR
Trigger: TCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTT...CACATGGCCGCCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCATACAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp CTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACCCAGGGCCCCTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: LSHLGPHSHQSYFPDPGPLILQG*LPLPDD
Trigger: GTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAG...GGGCCCTGGGTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR GCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTCTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGLILQG*LPLPDD
Trigger: GTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAG...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp AGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGTCATGGGCCACCTGGGGTGCTGCAACCACTTaGGCCCCTCAAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: RAAFRSLMTWSVWSWATWGAATT*APQEPA
Trigger: TGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACC...CCAGGTGGCCCATGACCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp ATAGAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTGGTCATGGGCCACCTaGCAGGCCCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: IEIRLPAGRDRPSTKVTGWSWAT*QARRKR
Trigger: CCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCA...GCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CAGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTTGGTCATGGGCCACCTaGCAGGCCCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: QGTGPCSRETRRYHWWWCWSWAT*QARRKR
Trigger: CCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCA...ACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCAGCGCCTGGTCTGTATGGTCATaGGCCACCTGGCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PRPVSPLPKVHFMSVFSAWSVWS*ATWQAR
Trigger: GCGGGCCTGCCAGGTGGCCCATGACCATACAGACCA...GGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACATGACCTGGTCTGTATaGTCATGGGCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHMTWSV*SWATWQ
Trigger: CTGCCAGGTGGCCCATGACCATACAGACCAGGTCAT...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGCGCTCCCTGATGACCTaGTCTGTATGGTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PAGRDRPSTKVTGLLSWRRSLMT*SVWSWA
Trigger: GGCCCATGACCATACAGACCAGGTCATCAGGGAGCG...CCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCAGGTGCCTCCGGTTCTaGATCTTCTTCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: DRPSTKVTGLLSWRYTWGRCLRF*IFFRTF
Trigger: GAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCT...GCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp ATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCAAGCACATGGCTCACCTGGGGCACAGGTaGGTAGAGGCGGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: MGSREGSRENSKRSKHMAHLGHR*VEAEAL
Trigger: GAGAGCTTCCGCCTCTACCCACCTGTGCCCCAGGTG...AGCCATGTGCTTGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACCTCCACACCCAGCCTaGGGAGGGTGGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQPPHPA*GGWCPG
Trigger: CCCTGGGCACCACCCTCCCCAGGCTGGGTGTGGAGG...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACGTCATTATGGTACTGTaGCCCAGGCCGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHVIMVL*PRPVSP
Trigger: AGGAGACACCGGCCTGGGCCACAGTACCATAATGAC...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR TCA 90 bp CCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PAGRDRPSTKVTGLLSWRVFSAM*PTSQKM
Trigger: CATCTTCTGCGATGTGGGTCACATGGCGCTGAACAC...CCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp AGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCTTCAGGTGGAGGTaGAAGCCATTCTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RDRPSTKVTGLLSWRYTWGFRWR*KPFLER
Trigger: GCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCC...CCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR TCA 90 bp AGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCAGCCGCCACCTCACCTaGTTTCCAGGATGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RISRTSSLQRCWCSGYRASRHLT*FPGWFR
Trigger: CCTGAACCATCCTGGAAATCAGGTGAGGTGGCGGCT...GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR TCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTCACCTAGCCTTCATCTaGCCTGCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGHLAFI*PAFSCS
Trigger: GGAGCAGCTGAAGGCAGGTCAGATGAAGGCTAGGTG...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR GCA 90 bp CACCTGATTTCCAGGATGGTTCAGGACAGGATGGGCATCGCCCTTCCCAAGGGCGCTGGGCACCATGGTTaGAGTTCCAGCCACCTAGCC +
Preference number: 4 (lower is better)
Translates to: HLISRMVQDRMGIALPKGAGHHG*SSSHLA
Trigger: GGCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGC...GCCCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCATCCTGGAAATCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR GCA 90 bp AAAGCCAGGTGTGAGCAGCTTGCGGTGCTGCAACCACTTGGGCCCCTCAAGAACAGCAGCTTGCGGTGCTaGAACCACTTGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: KARCEQLAVLQPLGPLKNSSLRC*NHLGPS
Trigger: TGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCT...GTTCTTGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR GCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCGTGAGCAGCTTGCGGTaGTGCAACCACTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLVSSLR*CNHLGP
Trigger: GGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCAC...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp GCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTGTGAGCAGCTTGCGGTaGTGCAACCACTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ASGGGESHSWSAGQAGASVSSLR*CNHLGP
Trigger: GGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCAC...AGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR GCA 90 bp GATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATCTGCAAGGTAGTAGCTaGTGTCCCTGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DLADLLSTTMLVLRVQGHLQGSS*CPCGPG
Trigger: GCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAG...ATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CCCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACCTGCAAGGTAGTAGCTaGTGTCCCTGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTGRSPGPLGSRGPPLYNLQGSS*CPCGPG
Trigger: GCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAG...GTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCCAGATCATCCCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCGGAAGCTGGGCACCATaGTTGCAGTTCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: PRSSHWKKSWSPRISRTSGSWAP*LQFQPP
Trigger: AGGTGGCTGGAACTGCAACCATGGTGCCCAGCTTCC...GGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR CCA 90 bp ATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCAAGCACATGGCTAGGCTCCCCGTCTCCTaGATCTCGAGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: MGSREGSRENSKRSKHMARLPVS*ISRACP
Trigger: TGGACATGCCCTCGAGATCCAGGAGACGGGGAGCCT...AGCCATGTGCTTGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp ATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTGGGAAGCGGCGGCCATGTaGGGTGAGCCAGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: IHKGDRLAELAVHLGHRWEAAAM*GEPVDE
Trigger: TTCATCTACTGGCTCACCCCACATGGCCGCCGCTTC...CCACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCTGGTCTGTATGGTCATaGGCCACCTGGCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLWSVWS*ATWQAR
Trigger: GCGGGCCTGCCAGGTGGCCCATGACCATACAGACCA...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTGGCACTGGAAGAAGTCCTaGTCCCCTAGGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: IHKGDRLAELAVHLGHRWHWKKS*SPRISR
Trigger: CCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG...CCACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCCTCCACACCCAGCCTaGGGAGGGTGGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPPPHPA*GGWCPG
Trigger: CCCTGGGCACCACCCTCCCCAGGCTGGGTGTGGAGG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp ATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGTCATGGGCAATGAAAGCCAGGTGTaGGCAGCTTGCGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ILQGCLPLPDDLVCMVMGNESQV*AACGAA
Trigger: TGCAGCACCGCAAGCTGCTCACACCTGGCTTTCATT...GCCCATGACCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR TCA 90 bp AGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCAATGAAAGCCAGGTGTaGGCAGCTTGCGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RISRTSSLQRCWCSGYRANESQV*AACGAA
Trigger: TGCAGCACCGCAAGCTGCTCACACCTGGCTTTCATT...GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp TGCGGTGCTGCAACCACTTGGGCCCCTCAAGAACCAGCAGGCCTCTCCCCTAGGCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: CGAATTWAPQEPAGLSPRQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...CCTAGGGGAGAGGCCTGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR TCA 90 bp ATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCAAGCACATGGCTGGCTTCAGGTGGAGGTaGAAGCCATTCTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: MGSREGSRENSKRSKHMAGFRWR*KPFLER
Trigger: GCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCC...AGCCATGTGCTTGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR TCA 90 bp CCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGCTGCATCTGACAGTTTaGTGTCATCTTCCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PAGRDRPSTKVTGLLSWRLHLTV*CHLPRA
Trigger: TGCCCGGGGAAGATGACATCAAACTGTCAGATGCAG...CCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614163.4
CDS-3UTR GCA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHSEIAD*KVVAAV
Trigger: GACAGCAGCTACTACCTTGCAGTCAGCGATCTCACT...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAAGGACACAAGGCGCTaGTGCATCAACAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHKDTRR*CINRVR
Trigger: TCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTT...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCCTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLLILQG*LPLPDD
Trigger: GTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAG...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp CACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGACTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: HWKKSWSPRISRTSSLQRLILQG*LPLPDD
Trigger: GTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAG...TCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CTCAGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTCGCACCTTCTCATCCTaGAGGGCTGCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LRVQGHAVEKPGDTTGGGRTFSS*RAAFRS
Trigger: GGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCG...ACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CATCAACAGAGTGAGATCGCTGACTGCAAGGTAGTAGCTGCTGTCCCTGTGGCCCGCACCTTCTCATCCTaGAGGGCTGCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HQQSEIADCKVVAAVPVARTFSS*RAAFRS
Trigger: GGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCG...GGCCACAGGGACAGCAGCTACTACCTTGCAGTCAGCGATCTCACTCTGTTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp GTCCAGGTGCCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGGGCCTACAACGATGCTGGTaGTCAGGGTACAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: VQVPPVLDLLPHLLILQGLQRCW*SGYRAM
Trigger: CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAG...GCCCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp CCCAGATCATCCCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCCTACAACGATGCTGGTaGTCAGGGTACAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: PRSSHWKKSWSPRISRTSLQRCW*SGYRAM
Trigger: CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAG...GGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCAAGGGCTGAGCAGGATAAACCGGGCCCACCCTCAGACTCACCACTGGAAGAAGGAAGCTGGGCACCATaGTTGCAGTTCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: PRAEQDKPGPPSDSPLEEGSWAP*LQFQPP
Trigger: AGGTGGCTGGAACTGCAACCATGGTGCCCAGCTTCC...TTCTTCCAGTGGTGAGTCTGAGGGTGGGCCCGGTTTATCCTGCTCAGCCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp CACCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAAAGGCTCCCCGTCTCCTaGATCTCGAGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: HHWKKSWSPRISRTSSLQRLPVS*ISRACP
Trigger: TGGACATGCCCTCGAGATCCAGGAGACGGGGAGCCT...TTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp ATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGGCTCCCCGTCTCCTaGATCTCGAGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: IRLPAGRDRPSTKVTGLLRLPVS*ISRACP
Trigger: TGGACATGCCCTCGAGATCCAGGAGACGGGGAGCCT...CAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp ACCTTCTCATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGGCATACGGGAACTGGTaGGCCCAGGACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: TFSSCRAAFRSLMTWSVWAYGNW*AQDTTL
Trigger: CAAAGTGGTGTCCTGGGCCCACCAGTTCCCGTATGC...CCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCTGGGCATACGGGAACTaGTGGGCCCAGGACACCACT +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLWAYGN*WAQDTT
Trigger: AGTGGTGTCCTGGGCCCACCAGTTCCCGTATGCCCA...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GGTCACAGCCTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACTGGGCATACGGGAACTaGTGGGCCCAGGACACCACT +
Preference number: 4 (lower is better)
Translates to: GHSLSHLGPHSHQSYFPDWAYGN*WAQDTT
Trigger: AGTGGTGTCCTGGGCCCACCAGTTCCCGTATGCCCA...GTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAGGCTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR CCA 90 bp CACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGACCGAACCAGAGTGGGTaGGCATACGGGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: HWKKSWSPRISRTSSLQRPNQSG*AYGNWW
Trigger: CCACCAGTTCCCGTATGCCCACCCACTCTGGTTCGG...TCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000614163.4
CDS-3UTR CCA 90 bp TGTCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGGTGCTGCAACCACTTaGGCCCCTCAAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: CHLHPGHPGECPGSPGASGAATT*APQEPA
Trigger: TGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACC...GGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp GATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGGTGCTGCAACCACTTaGGCCCCTCAAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: DLADLLSTTMLVLRVQGHGAATT*APQEPA
Trigger: TGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACC...ATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CTCATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGTCATGGAAGCGGCGGCCATGTaGGGTGAGCCAGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: LILQGCLPLPDDLVCMVMEAAAM*GEPVDE
Trigger: TTCATCTACTGGCTCACCCCACATGGCCGCCGCTTC...CATGACCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp CTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGGAAGCGGCGGCCATGTaGGGTGAGCCAGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: LPAGRDRPSTKVTGLLSWEAAAM*GEPVDE
Trigger: TTCATCTACTGGCTCACCCCACATGGCCGCCGCTTC...CCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCTGGTCATGGGCCACCTaGCAGGCCCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPWSWAT*QARRKR
Trigger: CCGCTTCCTGCGGGCCTGCCAGGTGGCCCATGACCA...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CAGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTTGGTCTGTATGGTCATaGGCCACCTGGCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QGTGPCSRETRRYHWWWCWSVWS*ATWQAR
Trigger: GCGGGCCTGCCAGGTGGCCCATGACCATACAGACCA...ACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACCCAGGGCCCAGGTGCCTCCGGTTCTaGATCTTCTTCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LSHLGPHSHQSYFPDPGPRCLRF*IFFRTF
Trigger: GAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCT...GGGCCCTGGGTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR CCA 90 bp AGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGTCTCTACAACGATGCTaGTGCTCAGGGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: RDRPSTKVTGLLSWRYTWSLQRC*CSGYRA
Trigger: GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGA...CCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGGCCCAGATCATCCCACTaGAAGAAGTCCTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSSSRAPRRMSRKSRCLRPRSSH*KKSWSP
Trigger: AGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGG...CCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR CCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCCAGCCTGGGGAGGGTaGTGCCCAGGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPPAWGG*CPGRSQ
Trigger: CTGTGACCTCCCTGGGCACCACCCTCCCCAGGCTGG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp AGTGAGATCGCTGACTGCAAGGTAGTAGCTGCTGTCCCTGTGGCCCAGGCCGGTGGTGGCAGCAGTTCTTaGCTGAGTGAGCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SEIADCKVVAAVPVAQAGGGSSS*LSELLP
Trigger: AGGAAGGAGCTCACTCAGCCAAGAACTGCTGCCACC...ACCGGCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAGTCAGCGATCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp ATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGTGGTTCAGGACAGGATaGGCATCGCCCTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ISRTSSLQRCWCSGYRAMWFRTG*ASPFPR
Trigger: CCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCA...CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR TCA 90 bp AGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 4 (lower is better)
Translates to: RISRTSSLQRCWCSGYRAGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTTGATGGGCAGCCGTaGGGGGTCCAGAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLLDGQP*GVQREL
Trigger: GAGTTCTCTCTGGACCCCTCACGGCTGCCCATCAAG...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GATGCATTCTCAGTGGAAAAGCGCAGAGAGTCAAAGACCTCAGGGTCGGGCCATCAAGCTGGGGCATCTTaGTGGGCAGCCGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: DAFSVEKRRESKTSGSGHQAGAS*WAAVRG
Trigger: ACCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTG...ATGGCCCGACCCTGAGGTCTTTGACTCTCTGCGCTTTTCCACTGAGAATGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR TCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCAGGGAGGTCACAGCCTaGGCCATCTGGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLREVTA*AIWDPI
Trigger: AATGGGGTCCCAGATGGCTCAGGCTGTGACCTCCCT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTAAACTACAAGCCTCCTaGAGGCAGGGGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: ASGGGESHSWSAGQAGASKLQAS*RQGAPT
Trigger: AGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTT...AGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR GCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCGCTGGGCACCATGGTTaGAGTTCCAGCCACCTAGCC +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLAGHHG*SSSHLA
Trigger: GGCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGC...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp TGGAAGGACACAAGGCGCTGCTGCATCAACAGAGTGAGATCGCTGACTGCAAGGGCTGGGCACCATGGTTaGAGTTCCAGCCACCTAGCC +
Preference number: 4 (lower is better)
Translates to: WKDTRRCCINRVRSLTARAGHHG*SSSHLA
Trigger: GGCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGC...CCTTGCAGTCAGCGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp ATAGAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCAGCAGCTTGCGGTGCTaGAACCACTTGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: IEIRLPAGRDRPSTKVTGSSLRC*NHLGPS
Trigger: TGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCT...GCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp ATGGTACTGGAAGGACACAAGGCGCTGCTGCATCAACAGAGTGAGATCGCTGACGTGAGCAGCTTGCGGTaGTGCAACCACTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: MVLEGHKALLHQQSEIADVSSLR*CNHLGP
Trigger: GGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCAC...GTCAGCGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTTCCAGTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp CAGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTCTGCAAGGTAGTAGCTaGTGTCCCTGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QGTGPCSRETRRYHWWWCLQGSS*CPCGPG
Trigger: GCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAG...ACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LPAGRDRPSTKVTGLLSWSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...CCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp AGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCCAGGGTACAGGGCCATaGAGTAGAGAAACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RISRTSSLQRCWCSGYRAQGTGP*SRETRR
Trigger: TCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG...GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp ATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGTCATGGGCTCCTCTCTACAACGATaGTGGTGCTCAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: ILQGCLPLPDDLVCMVMGSSLQR*WCSGYR
Trigger: CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGA...GCCCATGACCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp GTCCAGGTGCCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGGGCTCCTCTCTACAACGATaGTGGTGCTCAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VQVPPVLDLLPHLLILQGSSLQR*WCSGYR
Trigger: CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGA...GCCCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCGCATACGGGAACTGGTaGGCCCAGGACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLAYGNW*AQDTTL
Trigger: CAAAGTGGTGTCCTGGGCCCACCAGTTCCCGTATGC...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTTGGGCATACGGGAACTaGTGGGCCCAGGACACCACT +
Preference number: 4 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLWAYGN*WAQDTT
Trigger: AGTGGTGTCCTGGGCCCACCAGTTCCCGTATGCCCA...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TGGAAGGACACAAGGCGCTGCTGCATCAACAGAGTGAGATCGCTGACTGCAAGGCCGAACCAGAGTGGGTaGGCATACGGGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: WKDTRRCCINRVRSLTARPNQSG*AYGNWW
Trigger: CCACCAGTTCCCGTATGCCCACCCACTCTGGTTCGG...CCTTGCAGTCAGCGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCCTGTCCGAACCAGAGTaGGTGGGCATACGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLLSEPE*VGIREL
Trigger: CAGTTCCCGTATGCCCACCCACTCTGGTTCGGACAG...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCGAAGCGGCGGCCATGTaGGGTGAGCCAGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLEAAAM*GEPVDE
Trigger: TTCATCTACTGGCTCACCCCACATGGCCGCCGCTTC...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GATGTCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTGAAGCGGCGGCCATGTaGGGTGAGCCAGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: DVIFIPGTQENVQEVQVPEAAAM*GEPVDE
Trigger: TTCATCTACTGGCTCACCCCACATGGCCGCCGCTTC...AGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAATGGTCTGTATGGTCATaGGCCACCTGGCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQWSVWS*ATWQAR
Trigger: GCGGGCCTGCCAGGTGGCCCATGACCATACAGACCA...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CACCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGCTCCCTGATGACCTaGTCTGTATGGTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: HHWKKSWSPRISRTSSLQRSLMT*SVWSWA
Trigger: GGCCCATGACCATACAGACCAGGTCATCAGGGAGCG...TTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp GAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCGCTCCCTGATGACCTaGTCTGTATGGTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: EIRLPAGRDRPSTKVTGLRSLMT*SVWSWA
Trigger: GGCCCATGACCATACAGACCAGGTCATCAGGGAGCG...CAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp ATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCAAGCACATGGCTAGGTGCCTCCGGTTCTaGATCTTCTTCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: MGSREGSRENSKRSKHMARCLRF*IFFRTF
Trigger: GAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCT...AGCCATGTGCTTGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CAGTGGCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGTCTCTACAACGATGCTaGTGCTCAGGGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: QWLQVEVKAILGAQDKLGSLQRC*CSGYRA
Trigger: GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGA...CCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CACCTTCTCATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGTCTCTACAACGATGCTaGTGCTCAGGGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: HLLILQGCLPLPDDLVCMSLQRC*CSGYRA
Trigger: GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGA...CATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACACCTGGGGCACAGGTaGGTAGAGGCGGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQHLGHR*VEAEAL
Trigger: GAGAGCTTCCGCCTCTACCCACCTGTGCCCCAGGTG...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: TGRSPGPLGSRGPPLYNDTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...ATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTGAGCGCAGGACAAGCTaGGGCATCTTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLERRTS*GILMGS
Trigger: GCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTC...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGGTGAAAGCCATTCTTaGAGCGCAGGACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLADLLSTTMLVLRVQGHGESHS*SAGQAG
Trigger: CCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACC...ATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614163.4
CDS-3UTR CCA 90 bp GCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTAGACCCAGGGCCCAGTaGCTTCAGGTGGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: ASGGGESHSWSAGQAGASRPRAQ*LQVEVK
Trigger: TTTCACCTCCACCTGAAGCCACTGGGCCCTGGGTCT...AGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCAGACCCAGGGCCCAGTaGCTTCAGGTGGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: WKKSWSPRISRTSSLQRCRPRAQ*LQVEVK
Trigger: TTTCACCTCCACCTGAAGCCACTGGGCCCTGGGTCT...GCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614163.4
CDS-3UTR CCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCTGCTGTCCCTGCTGTaGCCCAGGCCGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPLLSLL*PRPVSP
Trigger: AGGAGACACCGGCCTGGGCCACAGCAGGGACAGCAG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371923.9
CDS-3UTR CCA 90 bp CCAGGATGGTTCAGGACAGGATGGGCATCGCCCTTCCCAAGGGCTGAGCAGGATTGCACCCACAAAGCCTaGGTCCAGGAACTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PGWFRTGWASPFPRAEQDCTHKA*VQELVS
Trigger: TGACACAAGTTCCTGGACCCAGGCTTTGTGGGTGCA...ATCCTGCTCAGCCCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCATCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp AAAGCCAGGTGTGAGCAGCTTGCGGTGCTGCAACCACTTGGGCCCCTCAAGAACCCTCAGACTCACCACTaGAAGAAGTCCTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KARCEQLAVLQPLGPLKNPQTHH*KKSWSP
Trigger: AGGGGACCAGGACTTCTTCCAGTGGTGAGTCTGAGG...GTTCTTGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529715.5
3UTR CAA 72 bp AAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTaGATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCA +
Preference number: 4 (lower is better)
Translates to: KPFLERRTSWGI*MGSREGSRENS
Trigger: TGAGTTCTCTCTGGACCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR TCA 90 bp TCCCAAGGGCTGAGCAGGATAAACCGGGCCCACCCTCAGACTCACCACTGGAAGTGTTCAGGAAGCCAATaGACTGTCCGAACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SQGLSRINRAHPQTHHWKCSGSQ*TVRTRV
Trigger: CACTCTGGTTCGGACAGTTCATTGGCTTCCTGAACA...CTTCCAGTGGTGAGTCTGAGGGTGGGCCCGGTTTATCCTGCTCAGCCCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR TCA 90 bp AGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCTGTTCAGGAAGCCAATaGACTGTCCGAACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RISRTSSLQRCWCSGYRACSGSQ*TVRTRV
Trigger: CACTCTGGTTCGGACAGTTCATTGGCTTCCTGAACA...GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000614163.4
CDS-3UTR TCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCAATGAAAGCCAGGTGTaGGCAGCTTGCGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLNESQV*AACGAA
Trigger: TGCAGCACCGCAAGCTGCTCACACCTGGCTTTCATT...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGGCATGGCCTTCAAACATaGATGTGTCCACTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSSSRAPRRMSRKSRCLRHGLQT*MCPLQP
Trigger: GGGCTGAAGTGGACACATTCATGTTTGAAGGCCATG...CCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR TCA 90 bp CCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACAGGTCATGGCCTTCAAACATaGATGTGTCCACTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSTKVTGLLSWRYTWGTGHGLQT*MCPLQP
Trigger: GGGCTGAAGTGGACACATTCATGTTTGAAGGCCATG...ACCTGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp ATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCAAGCACATGGCTGCAAGCACATGGCTGTaGCCACCTTCATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: MGSREGSRENSKRSKHMAASTWL*PPSSHS
Trigger: TGAGTGAGATGAAGGTGGTCACAGCCATGTGCTTGC...AGCCATGTGCTTGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR TCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCAAGCTGGGGCATCTTaGTGGGCAGCCGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPQAGAS*WAAVRG
Trigger: ACCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATCAAGCTGGGGCATCTTaGTGGGCAGCCGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHQAGAS*WAAVRG
Trigger: ACCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTG...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATCAAGCTGGGGCATCTTaGTGGGCAGCCGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYQAGAS*WAAVRG
Trigger: ACCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTG...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR GCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAAGCAGCTTGCGGTGCTaGAACCACTTGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQSSLRC*NHLGPS
Trigger: TGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCT...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp TCCCAAGGGCTGAGCAGGATAAACCGGGCCCACCCTCAGACTCACCACTGGAAGAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SQGLSRINRAHPQTHHWKSEIAD*KVVAAV
Trigger: GACAGCAGCTACTACCTTGCAGTCAGCGATCTCACT...CTTCCAGTGGTGAGTCTGAGGGTGGGCCCGGTTTATCCTGCTCAGCCCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR GCA 90 bp CTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGGACACAAGGCGCTGCTaGATCAACAGAGTGAGATCG +
Preference number: 4 (lower is better)
Translates to: LPAGRDRPSTKVTGLLSWDTRRC*INRVRS
Trigger: CGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTC...CCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp GCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTCTACAACGATGCTGGTaGTCAGGGTACAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: ASGGGESHSWSAGQAGASLQRCW*SGYRAM
Trigger: CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAG...AGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CCAGGATGGTTCAGGACAGGATGGGCATCGCCCTTCCCAAGGGCTGAGCAGGATTTTCTGTATCTCAGCTaGACCCACAAAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PGWFRTGWASPFPRAEQDFLYLS*THKAWV
Trigger: GACCCAGGCTTTGTGGGTGCAGCTGAGATACAGAAA...ATCCTGCTCAGCCCTTGGGAAGGGCGATGCCCATCCTGTCCTGAACCATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAAGGCTCCCCGTCTCCTaGATCTCGAGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQRLPVS*ISRACP
Trigger: TGGACATGCCCTCGAGATCCAGGAGACGGGGAGCCT...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTGCATACGGGAACTGGTaGGCCCAGGACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLAYGNW*AQDTTL
Trigger: CAAAGTGGTGTCCTGGGCCCACCAGTTCCCGTATGC...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCGCTCCCTGATGACCTaGTCTGTATGGTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLRSLMT*SVWSWA
Trigger: GGCCCATGACCATACAGACCAGGTCATCAGGGAGCG...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CAGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTCGCTCCCTGATGACCTaGTCTGTATGGTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: QGTGPCSRETRRYHWWWCRSLMT*SVWSWA
Trigger: GGCCCATGACCATACAGACCAGGTCATCAGGGAGCG...ACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCCCCAGATCATCCCACTaGAAGAAGTCCTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLPRSSH*KKSWSP
Trigger: AGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGG...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTCCCAGCCTGGGGAGGGTaGTGCCCAGGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: HGQISHFAQIIPLEEVLVPAWGG*CPGRSQ
Trigger: CTGTGACCTCCCTGGGCACCACCCTCCCCAGGCTGG...GACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR TCA 90 bp CTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGTGTTCAGGAAGCCAATaGACTGTCCGAACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LPAGRDRPSTKVTGLLSWCSGSQ*TVRTRV
Trigger: CACTCTGGTTCGGACAGTTCATTGGCTTCCTGAACA...CCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR TCA 90 bp TGGAAGGACACAAGGCGCTGCTGCATCAACAGAGTGAGATCGCTGACTGCAAGGGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: WKDTRRCCINRVRSLTARVFSAM*PTSQKM
Trigger: CATCTTCTGCGATGTGGGTCACATGGCGCTGAACAC...CCTTGCAGTCAGCGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR TCA 90 bp AGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTCGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: RVQGHAVEKPGDTTGGGVVFSAM*PTSQKM
Trigger: CATCTTCTGCGATGTGGGTCACATGGCGCTGAACAC...GACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp ACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TGRSPGPLGSRGPPLYNDVFSAM*PTSQKM
Trigger: CATCTTCTGCGATGTGGGTCACATGGCGCTGAACAC...ATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp ACCTTCTCATCCTGCAGGGCTGCCTTCCGCTCCCTGATGACCTGGTCTGTATGGCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: TFSSCRAAFRSLMTWSVWQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...CCATACAGACCAGGTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR TCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp CCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGGTTCTGGATCTTCTTCCGCAGACACAAGGCGCTGCTaGATCAACAGAGTGAGATCG +
Preference number: 4 (lower is better)
Translates to: PGECPGSPGASGSGSSSADTRRC*INRVRS
Trigger: CGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTC...TGCGGAAGAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGACATTCTCCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp CAGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: QGTGPCSRETRRYHWWWCSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...ACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCCAGGGTACAGGGCCATaGAGTAGAGAAACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLQGTGP*SRETRR
Trigger: TCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp GAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCAGGGTACAGGGCCATaGAGTAGAGAAACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EIRLPAGRDRPSTKVTGLQGTGP*SRETRR
Trigger: TCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG...CAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp ATGGGCAGCCGTGAGGGGTCCAGAGAGAACTCAAAGCGGAGCAAGCACATGGCTGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: MGSREGSRENSKRSKHMAGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...AGCCATGTGCTTGCTCCGCTTTGAGTTCTCTCTGGACCCCTCACGGCTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp AGAGTCAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGCATACGGGAACTGGTaGGCCCAGGACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: RVKDLRVGPYSTVPMEGIAYGNW*AQDTTL
Trigger: CAAAGTGGTGTCCTGGGCCCACCAGTTCCCGTATGC...TATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GAGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAAAGGACTTACCTGGGCATACGGGAACTaGTGGGCCCAGGACACCACT +
Preference number: 4 (lower is better)
Translates to: ECVQRHVTHIAEDVKGLTWAYGN*WAQDTT
Trigger: AGTGGTGTCCTGGGCCCACCAGTTCCCGTATGCCCA...GGTAAGTCCTTTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATCCGAACCAGAGTGGGTaGGCATACGGGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHPNQSG*AYGNWW
Trigger: CCACCAGTTCCCGTATGCCCACCCACTCTGGTTCGG...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTCCAGGTGCCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGGGCAAGTCATTATGGTACTaGAAGGACACAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VQVPPVLDLLPHLLILQGKSLWY*KDTRRC
Trigger: GCAGCGCCTTGTGTCCTTCCAGTACCATAATGACTT...GCCCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCATGACCTGGTCTGTATaGTCATGGGCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLMTWSV*SWATWQ
Trigger: CTGCCAGGTGGCCCATGACCATACAGACCAGGTCAT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACGCTCCCTGATGACCTaGTCTGTATGGTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQRSLMT*SVWSWA
Trigger: GGCCCATGACCATACAGACCAGGTCATCAGGGAGCG...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp AGGGTACAGGGCCATGCAGTAGAGAAACCAGGAGATACCACTGGTGGTGGTGTCTCTCTACAACGATGCTaGTGCTCAGGGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: RVQGHAVEKPGDTTGGGVSLQRC*CSGYRA
Trigger: GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGA...GACACCACCACCAGTGGTATCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACACTGGAAGAAGTCCTaGTCCCCTAGGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQHWKKS*SPRISR
Trigger: CCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTCCCAGATCATCCCACTaGAAGAAGTCCTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLPRSSH*KKSWSP
Trigger: AGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGG...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GCACTTCATGAGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAAACACCTGGGGCACAGGTaGGTAGAGGCGGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALHECVQRHVTHIAEDVKHLGHR*VEAEAL
Trigger: GAGAGCTTCCGCCTCTACCCACCTGTGCCCCAGGTG...TTTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR CCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACATAAAGGCAAAGGGATaGCGTTTGGATGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHIKAKG*RLDAFS
Trigger: TGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCGAGCGCAGGACAAGCTaGGGCATCTTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPERRTS*GILMGS
Trigger: GCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTC...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATGAGCGCAGGACAAGCTaGGGCATCTTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYERRTS*GILMGS
Trigger: GCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTC...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCCTCCACACCCAGCCTaGGGAGGGTGGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVPPHPA*GGWCPG
Trigger: CCCTGGGCACCACCCTCCCCAGGCTGGGTGTGGAGG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TGTCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTGCCTCCGCCTTCAGCTGCTCCTaGGTTCCTTTATACTCTGGA +
Preference number: 4 (lower is better)
Translates to: CHLHPGHPGECPGSPGASAFSCS*VPLYSG
Trigger: TCCAGAGTATAAAGGAACCCAGGAGCAGCTGAAGGC...GGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534708.6
3UTR CAA 72 bp GTGTCCACTTCAGCCCGGAGGTCTGCATCTGACAGTTaGATGTCATCTTCATCCCGGGCACCCAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: VSTSARRSASDS*MSSSSRAPRRM
Trigger: CATTCTCCTGGGTGCCCGGGATGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTGAAGTGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR TCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCGCAAGCACATGGCTGTaGCCACCTTCATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLASTWL*PPSSHS
Trigger: TGAGTGAGATGAAGGTGGTCACAGCCATGTGCTTGC...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAAACTACAAGCCTCCTaGAGGCAGGGGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPKLQAS*RQGAPT
Trigger: AGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTT...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTAGAAACACATCTCAGTaGAGGGGCACTCCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLRNTSQ*RGTPLS
Trigger: GCTTAGGGGAGTGCCCCTTCACTGAGATGTGTTTCT...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR GCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGTGAGCAGCTTGCGGTaGTGCAACCACTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTVSSLR*CNHLGP
Trigger: GGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCAC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCGACACAAGGCGCTGCTaGATCAACAGAGTGAGATCG +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLDTRRC*INRVRS
Trigger: CGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTC...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp AGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCAGCGCCATGGACACAAGGCGCTGCTaGATCAACAGAGTGAGATCG +
Preference number: 4 (lower is better)
Translates to: RPVSPLPKVHFMSVFSAMDTRRC*INRVRS
Trigger: CGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTC...CATGGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp ATCGCAGAAGATGTCAAAGGACTTACCCTCCCGAGCTTTCTCTTCCCACTTGTCCTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: IAEDVKGLTLPSFLFPLVLILQG*LPLPDD
Trigger: GTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAG...GACAAGTGGGAAGAGAAAGCTCGGGAGGGTAAGTCCTTTGACATCTTCTGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTCGCACCTTCTCATCCTaGAGGGCTGCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTRTFSS*RAAFRS
Trigger: GGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCG...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp ATGGTACTGGAAGGACACAAGGCGCTGCTGCATCAACAGAGTGAGATCGCTGACCTACAACGATGCTGGTaGTCAGGGTACAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: MVLEGHKALLHQQSEIADLQRCW*SGYRAM
Trigger: CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAG...GTCAGCGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTTCCAGTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR GCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTTCCTCTCTACAACGATaGTGGTGCTCAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLSSLQR*WCSGYR
Trigger: CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGA...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATCTGTCCGAACCAGAGTaGGTGGGCATACGGGAACTG +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHLSEPE*VGIREL
Trigger: CAGTTCCCGTATGCCCACCCACTCTGGTTCGGACAG...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp AGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTGGCTGTACACAGCTTTaGCATAGTCAGGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: SPGPLGSRGPPLYNDAGAGCTQL*HSQAHR
Trigger: TCTATGAGCCTGACTATGCCAAAGCTGTGTACAGCC...AGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000614163.4
CDS-3UTR CCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATGGTGCTGCAACCACTTaGGCCCCTCAAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHGAATT*APQEPA
Trigger: TGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACC...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGAAGTCATTATGGTACTaGAAGGACACAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISRTSSLQRCWCSGYRAMKSLWY*KDTRRC
Trigger: GCAGCGCCTTGTGTCCTTCCAGTACCATAATGACTT...CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATGAAGCGGCGGCCATGTaGGGTGAGCCAGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHEAAAM*GEPVDE
Trigger: TTCATCTACTGGCTCACCCCACATGGCCGCCGCTTC...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCACTGGAAGAAGTCCTaGTCCCCTAGGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPHWKKS*SPRISR
Trigger: CCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CCACTTGTCCAGCATGATACGTGTAGACTCAGTGAACACGGCCACATAGGGCTTCACTGGAAGAAGTCCTaGTCCCCTAGGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PLVQHDTCRLSEHGHIGLHWKKS*SPRISR
Trigger: CCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG...AAGCCCTATGTGGCCGTGTTCACTGAGTCTACACGTATCATGCTGGACAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp GTGTCCACTTCAGCCCGGAGGTCTGCATCTGACAGTTTGATGTCATCTTCATCCCACTGGAAGAAGTCCTaGTCCCCTAGGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: VSTSARRSASDSLMSSSSHWKKS*SPRISR
Trigger: CCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG...GGATGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTGAAGTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp AGAGTCAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATACCCAGATCATCCCACTaGAAGAAGTCCTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RVKDLRVGPYSTVPMEGIPRSSH*KKSWSP
Trigger: AGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGG...TATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GCACTTCATGAGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAAAACAGGCTTGCTGAGCTaGCGGTACACCTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: ALHECVQRHVTHIAEDVKTGLLS*RYTWGT
Trigger: TGTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGT...TTTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR CCA 90 bp AGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCCAAAGGGATGGCGTTTaGATGCATTCTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RISRTSSLQRCWCSGYRAQRDGV*MHSQWK
Trigger: TTTCCACTGAGAATGCATCCAAACGCCATCCCTTTG...GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp CTCTTCCCACTTGTCCAGCATGATACGTGTAGACTCAGTGAACACGGCCACATAGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LFPLVQHDTCRLSEHGHIAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...TATGTGGCCGTGTTCACTGAGTCTACACGTATCATGCTGGACAAGTGGGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR TCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATAATGAAAGCCAGGTGTaGGCAGCTTGCGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHNESQV*AACGAA
Trigger: TGCAGCACCGCAAGCTGCTCACACCTGGCTTTCATT...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GAGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAAAGGACTTACCAATGAAAGCCAGGTGTaGGCAGCTTGCGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ECVQRHVTHIAEDVKGLTNESQV*AACGAA
Trigger: TGCAGCACCGCAAGCTGCTCACACCTGGCTTTCATT...GGTAAGTCCTTTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR TCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTCTTGATGGGCAGCCGTaGGGGGTCCAGAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTLDGQP*GVQREL
Trigger: GAGTTCTCTCTGGACCCCTCACGGCTGCCCATCAAG...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAAGAAACACATCTCAGTaGAGGGGCACTCCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQRNTSQ*RGTPLS
Trigger: GCTTAGGGGAGTGCCCCTTCACTGAGATGTGTTTCT...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTCTGCAAGGTAGTAGCTaGTGTCCCTGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTLQGSS*CPCGPG
Trigger: GCCTGGGCCACAGGGACAGCAGCTACTACCTTGCAG...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271153.8
CDS-3UTR GCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLSEIAD*KVVAAV
Trigger: GACAGCAGCTACTACCTTGCAGTCAGCGATCTCACT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCAAGGACACAAGGCGCTaGTGCATCAACAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLKDTRR*CINRVR
Trigger: TCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp ACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTCGCACCTTCTCATCCTaGAGGGCTGCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TWSDKSFCPDHPTGRSPGRTFSS*RAAFRS
Trigger: GGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCG...ACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAATCCTCTCTACAACGATaGTGGTGCTCAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQSSLQR*WCSGYR
Trigger: CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGA...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp AGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATGAGTGTGTTCAGCGCCATGGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: RPVSPLPKVHFMSVFSAMGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...CATGGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR GCA 90 bp GGGCATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAGCCTTCATCTGACCTaGCTTCAGCTGCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GHKGKGMAFGCILSGKAQSLHLT*LQLLLG
Trigger: ACCCAGGAGCAGCTGAAGGCAGGTCAGATGAAGGCT...CTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTAGGCTCCCCGTCTCCTaGATCTCGAGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTRLPVS*ISRACP
Trigger: TGGACATGCCCTCGAGATCCAGGAGACGGGGAGCCT...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTTGGGCATACGGGAACTaGTGGGCCCAGGACACCACT +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTWAYGN*WAQDTT
Trigger: AGTGGTGTCCTGGGCCCACCAGTTCCCGTATGCCCA...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GCACTTCATGAGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAAACTGTCCGAACCAGAGTaGGTGGGCATACGGGAACTG +
Preference number: 4 (lower is better)
Translates to: ALHECVQRHVTHIAEDVKLSEPE*VGIREL
Trigger: CAGTTCCCGTATGCCCACCCACTCTGGTTCGGACAG...TTTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCGGCTGTACACAGCTTTaGCATAGTCAGGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLGCTQL*HSQAHR
Trigger: TCTATGAGCCTGACTATGCCAAAGCTGTGTACAGCC...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGTGGTCTGTATGGTCATaGGCCACCTGGCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMWSVWS*ATWQAR
Trigger: GCGGGCCTGCCAGGTGGCCCATGACCATACAGACCA...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTTGGTCTGTATGGTCATaGGCCACCTGGCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TWSDKSFCPDHPTGRSPGWSVWS*ATWQAR
Trigger: GCGGGCCTGCCAGGTGGCCCATGACCATACAGACCA...ACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATATGACCTGGTCTGTATaGTCATGGGCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHMTWSV*SWATWQ
Trigger: CTGCCAGGTGGCCCATGACCATACAGACCAGGTCAT...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CAGAAGATGTCAAAGGACTTACCCTCCCGAGCTTTCTCTTCCCACTTGTCCAGCATGACCTGGTCTGTATaGTCATGGGCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QKMSKDLPSRAFSSHLSSMTWSV*SWATWQ
Trigger: CTGCCAGGTGGCCCATGACCATACAGACCAGGTCAT...GCTGGACAAGTGGGAAGAGAAAGCTCGGGAGGGTAAGTCCTTTGACATCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp CCACTTGTCCAGCATGATACGTGTAGACTCAGTGAACACGGCCACATAGGGCTTAGGTGCCTCCGGTTCTaGATCTTCTTCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: PLVQHDTCRLSEHGHIGLRCLRF*IFFRTF
Trigger: GAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCT...AAGCCCTATGTGGCCGTGTTCACTGAGTCTACACGTATCATGCTGGACAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATTCTCTACAACGATGCTaGTGCTCAGGGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHSLQRC*CSGYRA
Trigger: GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGA...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCACCTGGGGCACAGGTaGGTAGAGGCGGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMHLGHR*VEAEAL
Trigger: GAGAGCTTCCGCCTCTACCCACCTGTGCCCCAGGTG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGAGCGCAGGACAAGCTaGGGCATCTTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTERRTS*GILMGS
Trigger: GCTGCCCATCAAGATGCCCCAGCTTGTCCTGCGCTC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 4 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATGCAAGCACATGGCTGTaGCCACCTTCATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHASTWL*PPSSHS
Trigger: TGAGTGAGATGAAGGTGGTCACAGCCATGTGCTTGC...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCTCCTTGTGCTCACTATaGGTCTCTAAGGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLSLCSL*VSKVGM
Trigger: CATTCCAACCTTAGAGACTCATAGTGAGCACAAGGA...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGCCTTAGCCAACGTCTaGCTCCGCAGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVALANV*LRSSRW
Trigger: CCACCTGCTGCTGCGGAGGCAGACGTTGGCTAAGGC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp ACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTAGCAGCTTGCGGTGCTaGAACCACTTGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TWSDKSFCPDHPTGRSPGSSLRC*NHLGPS
Trigger: TGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCT...ACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCTCATCCTGCAGGGCTaGCTTCCGCTCCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMLILQG*LPLPDD
Trigger: GTCATCAGGGAGCGGAAGGCAGCCCTGCAGGATGAG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCGCACCTTCTCATCCTaGAGGGCTGCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVRTFSS*RAAFRS
Trigger: GGAGCGGAAGGCAGCCCTGCAGGATGAGAAGGTGCG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATCAGGGTACAGGGCCATaGAGTAGAGAAACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYQGTGP*SRETRR
Trigger: TCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCTCCTCTCTACAACGATaGTGGTGCTCAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPSSLQR*WCSGYR
Trigger: CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGA...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp AGAGTCAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: RVKDLRVGPYSTVPMEGIGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...TATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGGAAGCTGGGCACCATaGTTGCAGTTCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTGSWAP*LQFQPP
Trigger: AGGTGGCTGGAACTGCAACCATGGTGCCCAGCTTCC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGCATACGGGAACTGGTaGGCCCAGGACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTAYGNW*AQDTTL
Trigger: CAAAGTGGTGTCCTGGGCCCACCAGTTCCCGTATGC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAGAGGGTGCTGCAACCACTTaGGCCCCTCAAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: IKAKGWRLDAFSVEKRREGAATT*APQEPA
Trigger: TGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACC...CTCTCTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCAAGTCATTATGGTACTaGAAGGACACAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLKSLWY*KDTRRC
Trigger: GCAGCGCCTTGTGTCCTTCCAGTACCATAATGACTT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR CCA 90 bp ATCGCAGAAGATGTCAAAGGACTTACCCTCCCGAGCTTTCTCTTCCCACTTGTCATGACCTGGTCTGTATaGTCATGGGCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IAEDVKGLTLPSFLFPLVMTWSV*SWATWQ
Trigger: CTGCCAGGTGGCCCATGACCATACAGACCAGGTCAT...GACAAGTGGGAAGAGAAAGCTCGGGAGGGTAAGTCCTTTGACATCTTCTGCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CCA 90 bp ATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAGAGCACTGGAAGAAGTCCTaGTCCCCTAGGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: IKAKGWRLDAFSVEKRREHWKKS*SPRISR
Trigger: CCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTG...CTCTCTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCAAAGGGATGGCGTTTaGATGCATTCTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EIRLPAGRDRPSTKVTGLQRDGV*MHSQWK
Trigger: TTTCCACTGAGAATGCATCCAAACGCCATCCCTTTG...CAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GATGCACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCGCCCAATGCAGTTCCTaGGCCCAGCAGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: DAHGQISHFAQIIPLEEVAQCSS*AQQRRA
Trigger: TGCCCTTCTCTGCTGGGCCCAGGAACTGCATTGGGC...GACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTAGACCCAGGGCCCAGTaGCTTCAGGTGGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTRPRAQ*LQVEVK
Trigger: TTTCACCTCCACCTGAAGCCACTGGGCCCTGGGTCT...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATTGTTCAGGAAGCCAATaGACTGTCCGAACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHCSGSQ*TVRTRV
Trigger: CACTCTGGTTCGGACAGTTCATTGGCTTCCTGAACA...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTVFSAM*PTSQKM
Trigger: CATCTTCTGCGATGTGGGTCACATGGCGCTGAACAC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCATGGCCTTCAAACATaGATGTGTCCACTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPHGLQT*MCPLQP
Trigger: GGGCTGAAGTGGACACATTCATGTTTGAAGGCCATG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GGGCATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGCATGGCCTTCAAACATaGATGTGTCCACTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHKGKGMAFGCILSGKAQHGLQT*MCPLQP
Trigger: GGGCTGAAGTGGACACATTCATGTTTGAAGGCCATG...CTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp CAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATAGATATCATGGCCTTCAAACATaGATGTGTCCACTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QRPQGRAIQHCSYGGHRYHGLQT*MCPLQP
Trigger: GGGCTGAAGTGGACACATTCATGTTTGAAGGCCATG...ATATCTATGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGAGGGAGGTCACAGCCTaGGCCATCTGGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVREVTA*AIWDPI
Trigger: AATGGGGTCCCAGATGGCTCAGGCTGTGACCTCCCT...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGCTGGGCACCATGGTTaGAGTTCCAGCCACCTAGCC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVAGHHG*SSSHLA
Trigger: GGCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCCGAACCAGAGTGGGTaGGCATACGGGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVPNQSG*AYGNWW
Trigger: CCACCAGTTCCCGTATGCCCACCCACTCTGGTTCGG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTCTGTCCGAACCAGAGTaGGTGGGCATACGGGAACTG +
Preference number: 4 (lower is better)
Translates to: TWSDKSFCPDHPTGRSPGLSEPE*VGIREL
Trigger: CAGTTCCCGTATGCCCACCCACTCTGGTTCGGACAG...ACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGGGTGCTGCAACCACTTaGGCCCCTCAAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMGAATT*APQEPA
Trigger: TGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACC...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAGAGATGACCTGGTCTGTATaGTCATGGGCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IKAKGWRLDAFSVEKRREMTWSV*SWATWQ
Trigger: CTGCCAGGTGGCCCATGACCATACAGACCAGGTCAT...CTCTCTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTAGGTGCCTCCGGTTCTaGATCTTCTTCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTRCLRF*IFFRTF
Trigger: GAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCT...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCTTGCTGCATTCTTCTATTTGGTaGTACCCAGCCATAACCATG +
Preference number: 4 (lower is better)
Translates to: IRLPAGRDRPSTKVTGLLHSSIW*YPAITM
Trigger: CATGGTTATGGCTGGGTACCACCAAATAGAAGAATG...CAGCAAGCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464439.6
3UTR CAA 72 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTaGGTGGTACCCAGCCATAACCATGAATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFY*VVPSHNHESQG
Trigger: GCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGCAAGCACATGGCTGTaGCCACCTTCATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTASTWL*PPSSHS
Trigger: TGAGTGAGATGAAGGTGGTCACAGCCATGTGCTTGC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGGCTTCAGGTGGAGGTaGAAGCCATTCTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVGFRWR*KPFLER
Trigger: GCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCTACAACGATGCTGGTaGTCAGGGTACAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMLQRCW*SGYRAM
Trigger: CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGGAAGCTGGGCACCATaGTTGCAGTTCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVGSWAP*LQFQPP
Trigger: AGGTGGCTGGAACTGCAACCATGGTGCCCAGCTTCC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR CCA 90 bp GGGCATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAAGTCATTATGGTACTaGAAGGACACAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GHKGKGMAFGCILSGKAQKSLWY*KDTRRC
Trigger: GCAGCGCCTTGTGTCCTTCCAGTACCATAATGACTT...CTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCCCAGATCATCCCACTaGAAGAAGTCCTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMPRSSH*KKSWSP
Trigger: AGGGGACCAGGACTTCTTCCAGTGGGATGATCTGGG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACAAAGGGATGGCGTTTaGATGCATTCTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQQRDGV*MHSQWK
Trigger: TTTCCACTGAGAATGCATCCAAACGCCATCCCTTTG...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp CTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCATCTTATAAAGGCAAAGGGATaGCGTTTGGATGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LQVEVKAILGAQDKLGHLIKAKG*RLDAFS
Trigger: TGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT...AAGATGCCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGGGTGAAAGCCATTCTTaGAGCGCAGGACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMGESHS*SAGQAG
Trigger: CCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACC...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTGGTGAAAGCCATTCTTaGAGCGCAGGACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TWSDKSFCPDHPTGRSPGGESHS*SAGQAG
Trigger: CCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACC...ACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR TCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTTGTTCAGGAAGCCAATaGACTGTCCGAACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTCSGSQ*TVRTRV
Trigger: CACTCTGGTTCGGACAGTTCATTGGCTTCCTGAACA...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGAATGAAAGCCAGGTGTaGGCAGCTTGCGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVNESQV*AACGAA
Trigger: TGCAGCACCGCAAGCTGCTCACACCTGGCTTTCATT...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGTGTTCAGCGCCATGTaGCCCACATCGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVVFSAM*PTSQKM
Trigger: CATCTTCTGCGATGTGGGTCACATGGCGCTGAACAC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CCATACAGCACTGTTCCTATGGAGGGCATAGATATGCATAGAGATCAGGCTTCCCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: PYSTVPMEGIDMHRDQASQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...GGAAGCCTGATCTCTATGCATATCTATGCCCTCCATAGGAACAGTGCTGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR TCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGGGCGGAAGCTCTCCTTaGTGCACATGGTCAGATAAG +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMGGSSP*CTWSDK
Trigger: CTTATCTGACCATGTGCATCAAGGAGAGCTTCCGCC...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTSEIAD*KVVAAV
Trigger: GACAGCAGCTACTACCTTGCAGTCAGCGATCTCACT...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVSRKSR*LRFWIF
Trigger: GAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGA...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp ACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTCAGGGTACAGGGCCATaGAGTAGAGAAACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TWSDKSFCPDHPTGRSPGQGTGP*SRETRR
Trigger: TCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG...ACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGTCAGGGAGAGGAAGCTaGGCACCATGGTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVSGRGS*APWLQF
Trigger: GAACTGCAACCATGGTGCCCAGCTTCCTCTCCCTGA...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGAGGTGCCTCCGGTTCTaGATCTTCTTCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVRCLRF*IFFRTF
Trigger: GAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCT...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGTCTCTACAACGATGCTaGTGCTCAGGGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVSLQRC*CSGYRA
Trigger: GGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGA...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAATAAAGGCAAAGGGATaGCGTTTGGATGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQIKAKG*RLDAFS
Trigger: TGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGGTGAAAGCCATTCTTaGAGCGCAGGACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVGESHS*SAGQAG
Trigger: CCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATAGCCATTCTTCTATTTaGTGGTACCCAGCCATAACC +
Preference number: 4 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHSHSSI*WYPAIT
Trigger: GGTTATGGCTGGGTACCACCAAATAGAAGAATGGCT...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCATGGCCTTCAAACATaGATGTGTCCACTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMHGLQT*MCPLQP
Trigger: GGGCTGAAGTGGACACATTCATGTTTGAAGGCCATG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGAGAAACACATCTCAGTaGAGGGGCACTCCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVRNTSQ*RGTPLS
Trigger: GCTTAGGGGAGTGCCCCTTCACTGAGATGTGTTTCT...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR GCA 90 bp ACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCCTGGTAGTGAGATCGCTGACTaGAAGGTAGTAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TWSDKSFCPDHPTGRSPGSEIAD*KVVAAV
Trigger: GACAGCAGCTACTACCTTGCAGTCAGCGATCTCACT...ACCAGGACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGACACAAGGCGCTGCTaGATCAACAGAGTGAGATCG +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVDTRRC*INRVRS
Trigger: CGATCTCACTCTGTTGATGCAGCAGCGCCTTGTGTC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCAGGGTACAGGGCCATaGAGTAGAGAAACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVQGTGP*SRETRR
Trigger: TCTCCTGGTTTCTCTACTGCATGGCCCTGTACCCTG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGGCTGTACACAGCTTTaGCATAGTCAGGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTGCTQL*HSQAHR
Trigger: TCTATGAGCCTGACTATGCCAAAGCTGTGTACAGCC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVQRCTS*VCSAPC
Trigger: ACATGGCGCTGAACACACTCATGAAGTGCACCTTTG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACAGAAGACACATCAGTaGTACCATATTCCATATTTC +
Preference number: 4 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQQKTHQ*YHIPYF
Trigger: GAAATATGGAATATGGTATCACTGATGTGTCTTCTG...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGAAGGACACAAGGCGCTaGTGCATCAACAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVKDTRR*CINRVR
Trigger: TCTCACTCTGTTGATGCAGCAGCGCCTTGTGTCCTT...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR GCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGGGATGGCGTTTGGATaGATTCTCAGTGGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVGMAFG*ILSGKA
Trigger: CGCTTTTCCACTGAGAATGCATCCAAACGCCATCCC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GATGCACATGGTCAGATAAGTCATTTTGCCCAGATCATCCCACTGGAAGAAGTCGGCTGTACACAGCTTTaGCATAGTCAGGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: DAHGQISHFAQIIPLEEVGCTQL*HSQAHR
Trigger: TCTATGAGCCTGACTATGCCAAAGCTGTGTACAGCC...GACTTCTTCCAGTGGGATGATCTGGGCAAAATGACTTATCTGACCATGTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGAAGTCATTATGGTACTaGAAGGACACAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMKSLWY*KDTRRC
Trigger: GCAGCGCCTTGTGTCCTTCCAGTACCATAATGACTT...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTAGCCATTCTTCTATTTaGTGGTACCCAGCCATAACC +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTSHSSI*WYPAIT
Trigger: GGTTATGGCTGGGTACCACCAAATAGAAGAATGGCT...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp ATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAGAGAGCCATTCTTCTATTTaGTGGTACCCAGCCATAACC +
Preference number: 4 (lower is better)
Translates to: IKAKGWRLDAFSVEKRRESHSSI*WYPAIT
Trigger: GGTTATGGCTGGGTACCACCAAATAGAAGAATGGCT...CTCTCTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR TCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGTCCTTGTGCTCACTATaGGTCTCTAAGGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMSLCSL*VSKVGM
Trigger: CATTCCAACCTTAGAGACTCATAGTGAGCACAAGGA...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR TCA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCAGAAGACACATCAGTaGTACCATATTCCATATTTC +
Preference number: 4 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPQKTHQ*YHIPYF
Trigger: GAAATATGGAATATGGTATCACTGATGTGTCTTCTG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGGGCTGTACACAGCTTTaGCATAGTCAGGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVGCTQL*HSQAHR
Trigger: TCTATGAGCCTGACTATGCCAAAGCTGTGTACAGCC...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTCATTCTTCTATTTGGTaGTACCCAGCCATAACCATG +
Preference number: 4 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTHSSIW*YPAITM
Trigger: CATGGTTATGGCTGGGTACCACCAAATAGAAGAATG...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCAAAGGGATGGCGTTTaGATGCATTCTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVQRDGV*MHSQWK
Trigger: TTTCCACTGAGAATGCATCCAAACGCCATCCCTTTG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CCA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCATTCTTCTATTTGGTaGTACCCAGCCATAACCATG +
Preference number: 4 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMHSSIW*YPAITM
Trigger: CATGGTTATGGCTGGGTACCACCAAATAGAAGAATG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACGCCCAGGACACCACTTaGTCCAGGCTCCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHAQDTT*SRLPVS
Trigger: GGAGACGGGGAGCCTGGACAAAGTGGTGTCCTGGGC...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CAA 90 bp CCAGGTGTGAGCAGCTTGCGGTGCTGCAACCACTTGGGCCCCTCAAGAACCAGCCCAGGTGTGAGCAGCTaGCGGTGCTGCAACCACTTG +
Preference number: 5 (lower is better)
Translates to: PGVSSLRCCNHLGPSRTSPGVSS*RCCNHL
Trigger: CAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGG...GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CAA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCGCCCAGGACACCACTTaGTCCAGGCTCCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLAQDTT*SRLPVS
Trigger: GGAGACGGGGAGCCTGGACAAAGTGGTGTCCTGGGC...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp CAGTGGCTTCAGGTGGAGGTGAAAGCCATTCTTGGAGCGCAGGACAAGCTGGGGCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: QWLQVEVKAILGAQDKLGRCCNH*GPSRTS
Trigger: GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCG...CCCCAGCTTGTCCTGCGCTCCAAGAATGGCTTTCACCTCCACCTGAAGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464439.6
ENST00000614163.4
CDS-3UTR CAA 90 bp CCCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACACAAGCTGGGGCATCTaGATGGGCAGCCGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: PTGRSPGPLGSRGPPLYNTSWGI*MGSREG
Trigger: CCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTGT...GTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614163.4
CDS CCA 90 bp CTCTCCCTCGAGGGCATGTCCAAAAAGCCAGTGGGTGGGAGGCCCTaGGAATTTGTCCATAGCCTTAGCCAACGTCTGCCTCCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LSLEGMSKKPVGGRP*EFVHSLSQRLPPQQ
Trigger: CTGCTGCGGAGGCAGACGTTGGCTAAGGCTATGGACAAATTCCCAGGGCCTCCCACCCACTGGCTTTTTGGACATGCCCTCGAGGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS-3UTR CAA 90 bp CCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGAGCTGGGCACCATGGTaGCAGTTCCAGCCACCTAGC +
Preference number: 5 (lower is better)
Translates to: PRISRTSSLQRCWCSGYRSWAPW*QFQPPS
Trigger: GCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGCT...CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CAA 90 bp ATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGAGCTGGGCACCATGGTaGCAGTTCCAGCCACCTAGC +
Preference number: 5 (lower is better)
Translates to: ISRTSSLQRCWCSGYRAMSWAPW*QFQPPS
Trigger: GCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGCT...CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CAA 90 bp CCTAGGATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGCCAGGTGTGAGCAGCTaGCGGTGCTGCAACCACTTG +
Preference number: 5 (lower is better)
Translates to: PRISRTSSLQRCWCSGYRPGVSS*RCCNHL
Trigger: CAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGG...CCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGATCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
CDS GCA 90 bp TGTCATCTTCCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: CHLPRAPRRMSRKSR*LRFWIFFRTFSSCR
Trigger: CCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGGAAGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614163.4
CDS CCA 90 bp CTGGATCTCGAGGGCATGTCCAAAAAGCCAGTGGGTGGGAGGCCCTaGGAATTTGTCCATAGCCTTAGCCAACGTCTGCCTCCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LDLEGMSKKPVGGRP*EFVHSLSQRLPPQQ
Trigger: CTGCTGCGGAGGCAGACGTTGGCTAAGGCTATGGACAAATTCCCAGGGCCTCCCACCCACTGGCTTTTTGGACATGCCCTCGAGATCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271153.8
ENST00000371919.8
ENST00000371923.9
ENST00000464439.6
ENST00000529715.5
ENST00000614163.4
ENST00000640628.1
CDS-3UTR CAA 90 bp CCGGCCATCCACAAAGGTGACAGGCTTGCTGAGCTGGCGGTACACCTGGGGCACGCAAAGGGATGGCGTTaGGATGCATTCTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: PAIHKGDRLAELAVHLGHAKGWR*DAFSVE
Trigger: TTCCACTGAGAATGCATCCAAACGCCATCCCTTTGC...GTGCCCCAGGTGTACCGCCAGCTCAGCAAGCCTGTCACCTTTGTGGATGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CAA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCACAAGCTGGGGCATCTaGATGGGCAGCCGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLTSWGI*MGSREG
Trigger: CCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTGT...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS GCA 90 bp TGGGTGGGAGGCCCTGGGAATTTGTCCATAGCCTTAGCCAACGTCTaGCTCCGCAGCAGCAGGTGGATGAGCTTGAGAAAGCCTAAGACC +
Preference number: 5 (lower is better)
Translates to: WVGGPGNLSIALANV*LRSSRWMSLRKPKT
Trigger: GGTCTTAGGCTTTCTCAAGCTCATCCACCTGCTGCTGCGGAGGCAGACGTTGGCTAAGGCTATGGACAAATTCCCAGGGCCTCCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271153.8
ENST00000371919.8
ENST00000371923.9
ENST00000464439.6
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
ENST00000640628.1
CDS-3UTR CAA 90 bp GTGTCCACTTCAGCCCGGAGGTCTGCATCTGACAGTTTGATGTCATCTTCATCCGCCCAGGACACCACTTaGTCCAGGCTCCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: VSTSARRSASDSLMSSSSAQDTT*SRLPVS
Trigger: GGAGACGGGGAGCCTGGACAAAGTGGTGTCCTGGGC...GGATGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTGAAGTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CAA 90 bp AGTTTGATGTCATCTTCATCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: SLMSSSSRAPRRMSRKSRRCCNH*GPSRTS
Trigger: GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCG...CCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGATGAAGATGACATCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CAA 90 bp TCCCAAGGGCTGAGCAGGATAAACCGGGCCCACCCTCAGACTCACCACTGGAAGCCTGGGTCCAGGAACTaGTGTCAGATGACATTGCCA +
Preference number: 5 (lower is better)
Translates to: SQGLSRINRAHPQTHHWKPGSRN*CQMTLP
Trigger: TGGCAATGTCATCTGACACAAGTTCCTGGACCCAGG...CTTCCAGTGGTGAGTCTGAGGGTGGGCCCGGTTTATCCTGCTCAGCCCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS TCA 90 bp GAAGCTGGGCACCATGGTTGCAGTTCCAGCCACCTAGCCTTCATCTaGCCTGCCTTCAGCTGCTCCTGGGTTCCTTTATACTCTGGACCC +
Preference number: 5 (lower is better)
Translates to: EAGHHGCSSSHLAFI*PAFSCSWVPLYSGP
Trigger: GGGTCCAGAGTATAAAGGAACCCAGGAGCAGCTGAAGGCAGGTCAGATGAAGGCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000640628.1
CDS-3UTR CAA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAAGCTGGGCACCATGGTaGCAGTTCCAGCCACCTAGC +
Preference number: 5 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQSWAPW*QFQPPS
Trigger: GCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGCT...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR CAA 90 bp CACATCTCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: HISVKGHSPKPFFYLVVPRCCNH*GPSRTS
Trigger: GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCG...GGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp CAGAAGATGTCAAAGGACTTACCCTCCCGAGCTTTCTCTTCCCACTTGTCCAGCCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: QKMSKDLPSRAFSSHLSSRCCNH*GPSRTS
Trigger: GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCG...GCTGGACAAGTGGGAAGAGAAAGCTCGGGAGGGTAAGTCCTTTGACATCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS TCA 90 bp TGCTGTGGCCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: CCGPGRCLLFQRCTS*VCSAPCDPHRRRCQ
Trigger: TTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGGCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371919.8
ENST00000371923.9
ENST00000452782.6
ENST00000526297.5
CDS-3UTR CAA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATAGCTGGGCACCATGGTaGCAGTTCCAGCCACCTAGC +
Preference number: 5 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHSWAPW*QFQPPS
Trigger: GCTAGGTGGCTGGAACTGCAACCATGGTGCCCAGCT...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271153.8
ENST00000371923.9
CDS-3UTR CAA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTGCCCAGGACACCACTTaGTCCAGGCTCCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTAQDTT*SRLPVS
Trigger: GGAGACGGGGAGCCTGGACAAAGTGGTGTCCTGGGC...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATCCAGGTGTGAGCAGCTaGCGGTGCTGCAACCACTTG +
Preference number: 5 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHPGVSS*RCCNHL
Trigger: CAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGG...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp GCCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCATCCTGCAGGGCTGCCTTCCGCTTTCTCTTCCCACTaGTCCAGCATGATACGTGTA +
Preference number: 5 (lower is better)
Translates to: ASGSGSSSAPSHPAGLPSAFSSH*SSMIRV
Trigger: TACACGTATCATGCTGGACAAGTGGGAAGAGAAAGC...GGAAGGCAGCCCTGCAGGATGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529715.5
ENST00000534708.6
CDS-3UTR CAA 90 bp ATCTCGCGGACCTCCTCTCTACAACGATGCTGGTGCTCAGGGTACAGGGCCATGGCAAAGGGATGGCGTTaGGATGCATTCTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: ISRTSSLQRCWCSGYRAMAKGWR*DAFSVE
Trigger: TTCCACTGAGAATGCATCCAAACGCCATCCCTTTGC...CATGGCCCTGTACCCTGAGCACCAGCATCGTTGTAGAGAGGAGGTCCGCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CAA 90 bp CCCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAACGCAAAGGGATGGCGTTaGGATGCATTCTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: PTGRSPGPLGSRGPPLYNAKGWR*DAFSVE
Trigger: TTCCACTGAGAATGCATCCAAACGCCATCCCTTTGC...GTTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534708.6
ENST00000614163.4
CDS TCA 90 bp TACTGTGGCCCAGGCCGGTGTCTCCTCTTCCAAAGGTGCACTTCATaGGTGTGTTCAGCGCCATGTGACCCACATCGCAGAAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: YCGPGRCLLFQRCTS*VCSAPCDPHRRRCQ
Trigger: TTGACATCTTCTGCGATGTGGGTCACATGGCGCTGAACACACTCATGAAGTGCACCTTTGGAAGAGGAGACACCGGCCTGGGCCACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS GCA 90 bp AAGTGCAAAGATTTGACTAAAGGCACAGAGGGTGCCAGAGGAGCATaGAGGGACTCCTTTTCCACCCCCAAATCCACCCATCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: KCKDLTKGTEGARGA*RDSFSTPKSTHPTC
Trigger: GCAGGTGGGATGGGTGGATTTGGGGGTGGAAAAGGAGTCCCTGCATGCTCCTCTGGCACCCTCTGTGCCTTTAGTCAAATCTTTGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481248.1
CDS-3UTR CAA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAGGAGGCCCTGGGAATTaGTCCATAGCCTTAGCCAAC +
Preference number: 5 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQGGPGN*SIALAN
Trigger: GTTGGCTAAGGCTATGGACAAATTCCCAGGGCCTCC...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp ATAAAGGCAAAGGGATGGCGTTTGGATGCATTCTCAGTGGAAAAGCGCAGAGAGCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: IKAKGWRLDAFSVEKRRERCCNH*GPSRTS
Trigger: GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCG...CTCTCTGCGCTTTTCCACTGAGAATGCATCCAAACGCCATCCCTTTGCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CAA 90 bp CTGAGCCATCTGGGACCCCATTCTCATCAGAGCTACTTCCCAGACCCAGGGCCCAAGCCATTCTTCTATTaGGTGGTACCCAGCCATAAC +
Preference number: 5 (lower is better)
Translates to: LSHLGPHSHQSYFPDPGPKPFFY*VVPSHN
Trigger: GTTATGGCTGGGTACCACCAAATAGAAGAATGGCTT...GGGCCCTGGGTCTGGGAAGTAGCTCTGATGAGAATGGGGTCCCAGATGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS CCA 90 bp AATTTGTCCATAGCCTTAGCCAACGTCTGCCTCCGCAGCAGCAGGTaGATGAGCTTGAGAAAGCCTAAGACCAAGATCAGCCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: NLSIALANVCLRSSR*MSLRKPKTKISPEA
Trigger: GGCTTCTGGGCTGATCTTGGTCTTAGGCTTTCTCAAGCTCATCCACCTGCTGCTGCGGAGGCAGACGTTGGCTAAGGCTATGGACAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271153.8
ENST00000371919.8
ENST00000371923.9
ENST00000464439.6
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
ENST00000640628.1
CDS-3UTR CAA 90 bp GTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTCCAGGTGTGAGCAGCTaGCGGTGCTGCAACCACTTG +
Preference number: 5 (lower is better)
Translates to: VVPSHNHESQGKTFLVLTPGVSS*RCCNHL
Trigger: CAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGG...AGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp CCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCCTCGCTTTCTCTTCCCACTaGTCCAGCATGATACGTGTA +
Preference number: 5 (lower is better)
Translates to: PTSLLNYKPPEGRGPQLLAFSSH*SSMIRV
Trigger: TACACGTATCATGCTGGACAAGTGGGAAGAGAAAGC...GAGGAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp CACCACTGGAAGAAGTCCTGGTCCCCTAGGATCTCGCGGACCTCCTCTCTACAAGCTTTCTCTTCCCACTaGTCCAGCATGATACGTGTA +
Preference number: 5 (lower is better)
Translates to: HHWKKSWSPRISRTSSLQAFSSH*SSMIRV
Trigger: TACACGTATCATGCTGGACAAGTGGGAAGAGAAAGC...TTGTAGAGAGGAGGTCCGCGAGATCCTAGGGGACCAGGACTTCTTCCAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CAA 90 bp ATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAACTCGCAAAGGGATGGCGTTaGGATGCATTCTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: MPTSLLNYKPPEGRGPQLAKGWR*DAFSVE
Trigger: TTCCACTGAGAATGCATCCAAACGCCATCCCTTTGC...GAGTTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVRCCNH*GPSRTS
Trigger: GCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCG...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGCCAGGTGTGAGCAGCTaGCGGTGCTGCAACCACTTG +
Preference number: 5 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMPGVSS*RCCNHL
Trigger: CAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGG...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp ATAGAGATCAGGCTTCCTGCAGGTAGAGACCGGCCATCCACAAAGGTGACAGGCGCTTTCTCTTCCCACTaGTCCAGCATGATACGTGTA +
Preference number: 5 (lower is better)
Translates to: IEIRLPAGRDRPSTKVTGAFSSH*SSMIRV
Trigger: TACACGTATCATGCTGGACAAGTGGGAAGAGAAAGC...GCCTGTCACCTTTGTGGATGGCCGGTCTCTACCTGCAGGAAGCCTGATCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464439.6
ENST00000534708.6
ENST00000614163.4
CDS-3UTR CAA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAAGCAAAGGGATGGCGTTaGGATGCATTCTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQAKGWR*DAFSVE
Trigger: TTCCACTGAGAATGCATCCAAACGCCATCCCTTTGC...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp TATTTGGTGGTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGACAAGCTGGGGCATCTaGATGGGCAGCCGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: YLVVPSHNHESQGKTFLVTSWGI*MGSREG
Trigger: CCCCTCACGGCTGCCCATCAAGATGCCCCAGCTTGT...CACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTACCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp TCAGTGAAGGGGCACTCCCCTAAGCCATTCTTCTATTTGGTGGTACCCAGCCATGCTTTCTCTTCCCACTaGTCCAGCATGATACGTGTA +
Preference number: 5 (lower is better)
Translates to: SVKGHSPKPFFYLVVPSHAFSSH*SSMIRV
Trigger: TACACGTATCATGCTGGACAAGTGGGAAGAGAAAGC...ATGGCTGGGTACCACCAAATAGAAGAATGGCTTAGGGGAGTGCCCCTTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS CCA 90 bp GACAGGATAACTCAGTTTCTGTATCTCAGCTGCACCCACAAAGCCTaGGTCCAGGAACTTGTGTCAGATGACATTGCCAGATGTGAGACA +
Preference number: 5 (lower is better)
Translates to: DRITQFLYLSCTHKA*VQELVSDDIARCET
Trigger: TGTCTCACATCTGGCAATGTCATCTGACACAAGTTCCTGGACCCAGGCTTTGTGGGTGCAGCTGAGATACAGAAACTGAGTTATCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS-3UTR CAA 90 bp AGAGAGTCAAAGACCTCAGGGTCGGGCCATACAGCACTGTTCCTATGGAGGGCATATGAGTCTCTAAGGTaGGAATGTAAGTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RESKTSGSGHTALFLWRAYESLR*ECKFLL
Trigger: CAGCAGAAACTTACATTCCAACCTTAGAGACTCATA...TGCCCTCCATAGGAACAGTGCTGTATGGCCCGACCCTGAGGTCTTTGACTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464439.6
CDS-3UTR CAA 90 bp GTAATGCCTACTTCCCTTCTAAACTACAAGCCTCCTGAAGGCAGGGGGCCCCAATATGAGTCTCTAAGGTaGGAATGTAAGTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VMPTSLLNYKPPEGRGPQYESLR*ECKFLL
Trigger: CAGCAGAAACTTACATTCCAACCTTAGAGACTCATA...TTGGGGCCCCCTGCCTTCAGGAGGCTTGTAGTTTAGAAGGGAAGTAGGCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGAAGCCATTCTTCTATTaGGTGGTACCCAGCCATAAC +
Preference number: 5 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMKPFFY*VVPSHN
Trigger: GTTATGGCTGGGTACCACCAAATAGAAGAATGGCTT...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS-3UTR CAA 90 bp GTACCCAGCCATAACCATGAATCTCAGGGCAAAACTTTCCTTGTGCTCACTATGTATGAGTCTCTAAGGTaGGAATGTAAGTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VPSHNHESQGKTFLVLTMYESLR*ECKFLL
Trigger: CAGCAGAAACTTACATTCCAACCTTAGAGACTCATA...CATAGTGAGCACAAGGAAAGTTTTGCCCTGAGATTCATGGTTATGGCTGGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271153.8
ENST00000371923.9
ENST00000464439.6
CDS CAA 72 bp AAGCCAGGTGTGAGCAGCTTGCGGTGCTGCAACCACTaGGGCCCCTCAAGAACCAGCAGGCCTCTCCCTCGA +
Preference number: 6 (lower is better)
Translates to: KPGVSSLRCCNH*GPSRTSRPLPR
Trigger: TCGAGGGAGAGGCCTGCTGGTTCTTGAGGGGCCCAAGTGGTTGCAGCACCGCAAGCTGCTCACACCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534708.6
CDS GCA 72 bp CCCCGGGCACCCAGGAGAATGTCCAGGAAGTCCAGGTaGCTCCGGTTCTGGATCTTCTTCCGCACCTTCTCA +
Preference number: 6 (lower is better)
Translates to: PRAPRRMSRKSR*LRFWIFFRTFS
Trigger: TGAGAAGGTGCGGAAGAAGATCCAGAACCGGAGGCACCTGGACTTCCTGGACATTCTCCTGGGTGCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614163.4
ENST00000640628.1
CDS CAA 90 bp ATAGCCTTAGCCAACGTCTGCCTCCGCAGCAGCAGGTGGATGAGCTaGAGAAAGCCTAAGACCAAGATCAGCCCAGAAGCCCACAGGCCC +
Preference number: 6 (lower is better)
Translates to: IALANVCLRSSRWMS*RKPKTKISPEAHRP
Trigger: GGGCCTGTGGGCTTCTGGGCTGATCTTGGTCTTAGGCTTTCTCAAGCTCATCCACCTGCTGCTGCGGAGGCAGACGTTGGCTAAGGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271153.8
ENST00000371919.8
ENST00000371923.9
ENST00000464439.6
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
ENST00000640628.1
CDS TCA 72 bp TGTCCACTTCAGCCCGGAGGTCTGCATCTGACAGTTTaGTGTCATCTTCCCCGGGCACCCAGGAGAATGTCC +
Preference number: 6 (lower is better)
Translates to: CPLQPGGLHLTV*CHLPRAPRRMS
Trigger: GGACATTCTCCTGGGTGCCCGGGGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTGAAGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614163.4
CDS GCA 72 bp GGCCCTGGGAATTTGTCCATAGCCTTAGCCAACGTCTaGCTCCGCAGCAGCAGGTGGATGAGCTTGAGAAAG +
Preference number: 6 (lower is better)
Translates to: GPGNLSIALANV*LRSSRWMSLRK
Trigger: CTTTCTCAAGCTCATCCACCTGCTGCTGCGGAGGCAGACGTTGGCTAAGGCTATGGACAAATTCCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271153.8
ENST00000371919.8
ENST00000371923.9
ENST00000464439.6
ENST00000529715.5
ENST00000534708.6
ENST00000614163.4
ENST00000640628.1
CDS GCA 72 bp GAGGAAGAAGTCATACACATCAGGGGCCTTAGGGTCTaGAGGAGGAGACAATCAGGTCAAGCAGGGACCCGG +
Preference number: 6 (lower is better)
Translates to: EEEVIHIRGLRV*RRRQSGQAGTR
Trigger: CCGGGTCCCTGCTTGACCTGATTGTCTCCTCCTGCAGACCCTAAGGCCCCTGATGTGTATGACTTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452782.6
ENST00000468637.3
CDS CAA 72 bp GCAGGTGACCCAATCTCCCGCAAGGACAACCAAGAATaGCTGGCACAGGTGCAGGTCGGGGCAGGTAATCAA +
Preference number: 6 (lower is better)
Translates to: AGDPISRKDNQE*LAQVQVGAGNQ
Trigger: TTGATTACCTGCCCCGACCTGCACCTGTGCCAGCAATTCTTGGTTGTCCTTGCGGGAGATTGGGTCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546128.5
CDS CAA 72 bp GTGTCCACTTCAGCCCGGAGGTCTGCATCTGACAGTTaGATGTCATCTTCCCCGGGCACCCAGGAGAATGTC +
Preference number: 6 (lower is better)
Translates to: VSTSARRSASDS*MSSSPGTQENV
Trigger: GACATTCTCCTGGGTGCCCGGGGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTGAAGTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614163.4
CDS GCA 72 bp CAGGTGACCCAATCTCCCGCAAGGACAACCAAGAATTaGTGGCACAGGTGCAGGTCGGGGCAGGTAATCAAA +
Preference number: 6 (lower is better)
Translates to: QVTQSPARTTKN*WHRCRSGQVIK
Trigger: TTTGATTACCTGCCCCGACCTGCACCTGTGCCAGCAATTCTTGGTTGTCCTTGCGGGAGATTGGGTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546128.5
CDS CCA 72 bp GTGACCCAATCTCCCGCAAGGACAACCAAGAATTGCTaGCACAGGTGCAGGTCGGGGCAGGTAATCAAATTA +
Preference number: 6 (lower is better)
Translates to: VTQSPARTTKNC*HRCRSGQVIKL
Trigger: TAATTTGATTACCTGCCCCGACCTGCACCTGTGCCAGCAATTCTTGGTTGTCCTTGCGGGAGATTGGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546128.5
CDS CAA 72 bp CAGGTCCTCAGTCTGCCCATCTGTTCCATAGGAGGGTaGGAAGAAGTCCCGTCTCATGCTAAGATAGTGCGT +
Preference number: 6 (lower is better)
Translates to: QVLSLPICSIGG*EEVPSHAKIVR
Trigger: ACGCACTATCTTAGCATGAGACGGGACTTCTTCCAACCCTCCTATGGAACAGATGGGCAGACTGAGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413093.2
ENST00000546128.5
CDS CAA 72 bp ATCTCAGCTGCACCCACAAAGCCTGGGTCCAGGAACTaGTGTCAGATGACATTGCCAGATGTGAGACAAAGG +
Preference number: 6 (lower is better)
Translates to: ISAAPTKPGSRN*CQMTLPDVRQR
Trigger: CCTTTGTCTCACATCTGGCAATGTCATCTGACACAAGTTCCTGGACCCAGGCTTTGTGGGTGCAGCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS CCA 72 bp ACTCAGTTTCTGTATCTCAGCTGCACCCACAAAGCCTaGGTCCAGGAACTTGTGTCAGATGACATTGCCAGA +
Preference number: 6 (lower is better)
Translates to: TQFLYLSCTHKA*VQELVSDDIAR
Trigger: TCTGGCAATGTCATCTGACACAAGTTCCTGGACCCAGGCTTTGTGGGTGCAGCTGAGATACAGAAACTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529715.5
CDS CCA 72 bp TCAGAGGTAGAAGAATTGATCAATATGTTGTGGGGCTaGGATTTAGACCCAGGGCTCTCTGAACGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: SEVEELINMLWG*DLDPGLSERKA
Trigger: GGCTTTGCGTTCAGAGAGCCCTGGGTCTAAATCCCAGCCCCACAACATATTGATCAATTCTTCTACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481248.1
CDS CAA 90 bp ATTCCTTCTCAGGTCCTCAGTCTGCCCATCTGTTCCATAGGAGGGTaGGAAGAAGTCCCGTCTCATGCTAAGATAGTGCGTCTTAACAAT +
Preference number: 6 (lower is better)
Translates to: IPSQVLSLPICSIGG*EEVPSHAKIVRLNN
Trigger: ATTGTTAAGACGCACTATCTTAGCATGAGACGGGACTTCTTCCAACCCTCCTATGGAACAGATGGGCAGACTGAGGACCTGAGAAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413093.2
ENST00000546128.5
CDS TCA 72 bp TGGGATTTAGACCCAGGGCTCTCTGAACGCAAAGCCTaGGCTCTTCCCCAAAAGTGCAAAGATTTGACTAAA +
Preference number: 6 (lower is better)
Translates to: WDLDPGLSERKA*ALPQKCKDLTK
Trigger: TTTAGTCAAATCTTTGCACTTTTGGGGAAGAGCTCAGGCTTTGCGTTCAGAGAGCCCTGGGTCTAAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481248.1
CDS TCA 72 bp TCTTCCTTTAAGAGTCCCATAGAAAACTTCAATGTGTaGTCCTGGGCAAGTAGATTCCTTCTCAGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SSFKSPIENFNV*SWASRFLLRSS
Trigger: TGAGGACCTGAGAAGGAATCTACTTGCCCAGGATCACACATTGAAGTTTTCTATGGGACTCTTAAAGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413093.2