RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP39A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146233

Ensembl transcript IDs: ENST00000275016.3, ENST00000476076.1, ENST00000480804.1, ENST00000489657.1, ENST00000619708.4

Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTaGTCTACTGTTGAAGATACCAAACACATGCACCATTTGAATGTG +
Preference number: 1 (lower is better)
Translates to: PCIPVSILLRVMLDS*STVEDTKHMHHLNV
Trigger: CACATTCAAATGGTGCATGTGTTTGGTATCTTCAACAGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
3UTR TCA 90 bp GGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTGTTaGAGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTA +
Preference number: 1 (lower is better)
Translates to: GLYITESDVRFLVYC*RYQTHAPFECVLEL
Trigger: TAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCTTCAACAGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
3UTR-3UTR CCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCCTAGGTGCTGCCAGGTaGGGTAGTGCCACTCCTCCA +
Preference number: 2 (lower is better)
Translates to: AILSIIKCRNECKTPFLSLGAAR*GSATPP
Trigger: TGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAG...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
3UTR-3UTR CCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACACTAGGTGCTGCCAGGTaGGGTAGTGCCACTCCTCCA +
Preference number: 2 (lower is better)
Translates to: RYQTHAPFECVLELSPKTLGAAR*GSATPP
Trigger: TGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAG...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
3UTR-3UTR TCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCTTCTTGGTCTACTGTTaGAGATACCAAACACATGCA +
Preference number: 2 (lower is better)
Translates to: AILSIIKCRNECKTPFLSFLVYC*RYQTHA
Trigger: TGCATGTGTTTGGTATCTTCAACAGTAGACCAAGAA...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
3UTR CCA 72 bp CCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTaGTCTACTGTTGAAGATACCAAACACATGCACCAT +
Preference number: 3 (lower is better)
Translates to: PVSILLRVMLDS*STVEDTKHMHH
Trigger: ATGGTGCATGTGTTTGGTATCTTCAACAGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
3UTR-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGATTCTTGGTCTACTGTaGAAGATACCAAACACATGC +
Preference number: 3 (lower is better)
Translates to: GAILSIIKCRNECKTPFLILGLL*KIPNTC
Trigger: GCATGTGTTTGGTATCTTCAACAGTAGACCAAGAAT...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
3UTR TCA 72 bp ATTACTGAGAGTGATGTTAGATTCTTGGTCTACTGTTaGAGATACCAAACACATGCACCATTTGAATGTGTT +
Preference number: 3 (lower is better)
Translates to: ITESDVRFLVYC*RYQTHAPFECV
Trigger: AACACATTCAAATGGTGCATGTGTTTGGTATCTTCAACAGTAGACCAAGAATCTAACATCACTCTCAGTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTAGAAGCAGAAAAGTGTaGAACAGTCCTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGRSRKV*NSPAVP
Trigger: AGGGACGGCAGGACTGTTTCACACTTTTCTGCTTCT...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTGACTCCCAACCTTTCTaGTGCAACTTTTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGDSQPF*CNFCSS
Trigger: AGAGCTGCAAAAGTTGCAGCAGAAAGGTTGGGAGTC...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTTCCAACGTTCAGGTTTaGACAATTCAGGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGSNVQV*TIQAQE
Trigger: TTCCTGAGCCTGAATTGTTCAAACCTGAACGTTGGA...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTGAGCCCATAATTGGGTaGGTTTTCCTTACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGEPIIG*VFLTCF
Trigger: GAAACAAGTAAGGAAAACTCACCCAATTATGGGCTC...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTTTCTTGGTCTACTGTTaGAGATACCAAACACATGCA +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGFLVYC*RYQTHA
Trigger: TGCATGTGTTTGGTATCTTCAACAGTAGACCAAGAA...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTGTAAGAGCCCATAATTaGGTGAGTTTTCCTTACTTG +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGVRAHN*VSFPYL
Trigger: CAAGTAAGGAAAACTCACCCAATTATGGGCTCTTAC...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTAATCTTATCTTTGCCTaGTTTGCCAAACACAGAAGA +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGNLIFA*FAKHRR
Trigger: TCTTCTGTGTTTGGCAAAGCAGGCAAAGATAAGATT...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTCAGTCCAAGAAAGAGTaGTTCTCTAAATTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGQSKKE*FSKFAF
Trigger: AAAGGCAAATTTAGAGAAGCACTCTTTCTTGGACTG...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTGAGCTTTTAAACGAATaGTTTCCAAAACACACCATT +
Preference number: 4 (lower is better)
Translates to: SGLGAARWGSATPPEGPGELLNE*FPKHTI
Trigger: AATGGTGTGTTTTGGAAACCATTCGTTTAAAAGCTC...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGCATTGCCCTTCCGGCTaGGGGACACCCACCAAATGG +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLHCPSG*GTPTKW
Trigger: CCATTTGGTGGGTGTCCCCCAGCCGGAAGGGCAATG...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGCTAGGTGCTGCCAGGTaGGGTAGTGCCACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLLGAAR*GSATPP
Trigger: TGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAG...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCTAGGTGCTGCCAGGTaGGGTAGTGCCACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTLGAAR*GSATPP
Trigger: TGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGAAGGAATCCAGCCCTTaGTGCACGGGGGTCTACGCA +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLKESSP*CTGVYA
Trigger: TGCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTT...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTAAGGAATCCAGCCCTTaGTGCACGGGGGTCTACGCA +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTKESSP*CTGVYA
Trigger: TGCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTT...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCAGGCCCTGGTCCTTGTaGGGCCCAACAGATGTCATA +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSRPWSL*GPTDVI
Trigger: TATGACATCTGTTGGGCCTCACAAGGACCAGGGCCT...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACACATTGCCCTTCCGGCTaGGGGACACCCACCAAATGG +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTHCPSG*GTPTKW
Trigger: CCATTTGGTGGGTGTCCCCCAGCCGGAAGGGCAATG...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTACCTCCACTTCTCTTTaGATCTCAGCCAGCGCGGAA +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTTSTSL*ISASAE
Trigger: TTCCGCGCTGGCTGAGATTCAAAGAGAAGTGGAGGT...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGAGTCCTGCCGTCCCTTaGTTCTTTTCTGTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLSPAVP*FFSVGY
Trigger: GTAGCCCACAGAAAAGAAGCAAGGGACGGCAGGACT...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGCAGAGCAAACCACCTTaGAGGACACTGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLQSKPP*RTLELP
Trigger: GGGAAGTTCCAGTGTCCTGCAAGGTGGTTTGCTCTG...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTTATTCAATTCGGCATTaGCCTTCCGGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTYSIRH*PSGWGT
Trigger: TGTCCCCCAGCCGGAAGGGCAATGCCGAATTGAATA...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCTTGCTTCTTTTCTGTaGGCTACGGAACCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTLASFL*ATEPVG
Trigger: CCCGACAGGTTCCGTAGCCCACAGAAAAGAAGCAAG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGAGAAGCAGAAAAGTGTaGAACAGTCCTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLRSRKV*NSPAVP
Trigger: AGGGACGGCAGGACTGTTTCACACTTTTCTGCTTCT...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCAGTTGCCCAGTAAACTaGTGGAGATTGACAGTCCCC +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSSCPVN*WRLTVP
Trigger: GGGGACTGTCAATCTCCATCAGTTTACTGGGCAACT...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS-3UTR TCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAAGGCCCTGGTCCTTGTaGGGCCCAACAGATGTCATA +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTRPWSL*GPTDVI
Trigger: TATGACATCTGTTGGGCCTCACAAGGACCAGGGCCT...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCCACCTTGCAGGACACTaGAACTTCCCGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSHLAGH*NFPLPN
Trigger: ATTTGGAAGCGGGAAGTTCCAGTGTCCTGCAAGGTG...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAACCTCCACTTCTCTTTaGATCTCAGCCAGCGCGGAA +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTTSTSL*ISASAE
Trigger: TTCCGCGCTGGCTGAGATTCAAAGAGAAGTGGAGGT...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGGTCCCAGTTTTCAGGTaGTTTTTCCATTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLVPVFR*FFHCRS
Trigger: GGAGCGACAATGGAAAAATCACCTGAAAACTGGGAC...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCGCAAATTCTTCCGCTaGAGGAGTAAGAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTRKFFR*RSKNRA
Trigger: TGCTCTGTTCTTACTCCTTCAGCGGAAGAATTTGCG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGCGCAAATTCTTCCGCTaGAGGAGTAAGAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLRKFFR*RSKNRA
Trigger: TGCTCTGTTCTTACTCCTTCAGCGGAAGAATTTGCG...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCCGCTTCCAAATGCCATaGAGCAGTCCAAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSRFQMP*SSPRKS
Trigger: ACTCTTTCTTGGACTGCTTCATGGCATTTGGAAGCG...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCCAACCTTTCTGCTaGAACTTTTGCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLSQPFC*NFCSSP
Trigger: AGGAGAGCTGCAAAAGTTGCAGCAGAAAGGTTGGGA...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCGACTCCCAACCTTTCTaGTGCAACTTTTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSDSQPF*CNFCSS
Trigger: AGAGCTGCAAAAGTTGCAGCAGAAAGGTTGGGAGTC...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGAGTGTGAAACAGTCCTaGCGTCCCTTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLSVKQS*RPLLLF
Trigger: GAAAAGAAGCAAGGGACGGCAGGACTGTTTCACACT...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCAGTGTGAAACAGTCCTaGCGTCCCTTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSSVKQS*RPLLLF
Trigger: GAAAAGAAGCAAGGGACGGCAGGACTGTTTCACACT...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACACAGAGCAAACCACCTTaGAGGACACTGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTQSKPP*RTLELP
Trigger: GGGAAGTTCCAGTGTCCTGCAAGGTGGTTTGCTCTG...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACATATTCAATTCGGCATTaGCCTTCCGGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTYSIRH*PSGWGT
Trigger: TGTCCCCCAGCCGGAAGGGCAATGCCGAATTGAATA...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACACTTGCTTCTTTTCTGTaGGCTACGGAACCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTLASFL*ATEPVG
Trigger: CCCGACAGGTTCCGTAGCCCACAGAAAAGAAGCAAG...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTAGACACTCTGGCAACTaGGACCCATACTCAAAATCT +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTRHSGN*DPYSKS
Trigger: AGATTTTGAGTATGGGTCCCAGTTGCCAGAGTGTCT...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCAGACACTCTGGCAACTaGGACCCATACTCAAAATCT +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSRHSGN*DPYSKS
Trigger: AGATTTTGAGTATGGGTCCCAGTTGCCAGAGTGTCT...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACACACCTTGCAGGACACTaGAACTTCCCGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTHLAGH*NFPLPN
Trigger: ATTTGGAAGCGGGAAGTTCCAGTGTCCTGCAAGGTG...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCAGAGCATATTCACTGTaGCTGGATAAAGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSRAYSL*LDKGDV
Trigger: GACATCTCCTTTATCCAGTCACAGTGAATATGCTCT...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTGAGCCCATAATTGGGTaGGTTTTCCTTACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTEPIIG*VFLTCF
Trigger: GAAACAAGTAAGGAAAACTCACCCAATTATGGGCTC...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTTGTGGATATCAGGATaGGAAAGGACGTATGCAAGT +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLLWISG*ERTYAS
Trigger: ACTTGCATACGTCCTTTCTCATCCTGATATCCACAA...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTTTGTGGATATCAGGATaGGAAAGGACGTATGCAAGT +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTLWISG*ERTYAS
Trigger: ACTTGCATACGTCCTTTCTCATCCTGATATCCACAA...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACATCCCAACCTTTCTGCTaGAACTTTTGCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTSQPFC*NFCSSP
Trigger: AGGAGAGCTGCAAAAGTTGCAGCAGAAAGGTTGGGA...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACATCCAACGTTCAGGTTTaGACAATTCAGGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTSNVQV*TIQAQE
Trigger: TTCCTGAGCCTGAATTGTTCAAACCTGAACGTTGGA...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTGCAAGTGTCCAAAATaGAACAGGAACAGCATTAGA +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLCKCPK*NRNSIR
Trigger: TCTAATGCTGTTCCTGTTGCATTTTGGACACTTGCA...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCATGAGAAAGGACGTATaGAAGTGTCCAAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSMRKDV*KCPKCN
Trigger: GTTGCATTTTGGACACTTGCATACGTCCTTTCTCAT...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTATGAGAAAGGACGTATaGAAGTGTCCAAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTMRKDV*KCPKCN
Trigger: GTTGCATTTTGGACACTTGCATACGTCCTTTCTCAT...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCTATCTTTGCCTGCTTTaGCAAACACAGAAGATATGC +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSYLCLL*QTQKIC
Trigger: GCATATCTTCTGTGTTTGGCAAAGCAGGCAAAGATA...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTATCTTTGCCTGCTTTaGCAAACACAGAAGATATGC +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLYLCLL*QTQKIC
Trigger: GCATATCTTCTGTGTTTGGCAAAGCAGGCAAAGATA...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTGTAAGAGCCCATAATTaGGTGAGTTTTCCTTACTTG +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTVRAHN*VSFPYL
Trigger: CAAGTAAGGAAAACTCACCCAATTATGGGCTCTTAC...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCTATGCAGCCAAAATaGAGACAACATCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLSMQPK*RQHQQV
Trigger: GACTTGTTGATGTTGTCTCCATTTTGGCTGCATAGA...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAAGAGCATATTCACTGTaGCTGGATAAAGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTRAYSL*LDKGDV
Trigger: GACATCTCCTTTATCCAGTCACAGTGAATATGCTCT...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGGTTCCAATTGCTAGTTaGGAATCACCTCAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLVPIAS*ESPQEK
Trigger: TTTTTCTTGAGGTGATTCTCAACTAGCAATTGGAAC...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCAGTCCAAGAAAGAGTaGTTCTCTAAATTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTQSKKE*FSKFAF
Trigger: AAAGGCAAATTTAGAGAAGCACTCTTTCTTGGACTG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCCATATTCACTGTGACTaGATAAAGGAGATGTCTTAC +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSHIHCD*IKEMSY
Trigger: GTAAGACATCTCCTTTATCCAGTCACAGTGAATATG...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS-3UTR CCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCGTGATGTTAGATTCTTaGTCTACTGTTGAAGATACC +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSVMLDS*STVEDT
Trigger: GGTATCTTCAACAGTAGACCAAGAATCTAACATCAC...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACATGCAAGTGTCCAAAATaGAACAGGAACAGCATTAGA +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTCKCPK*NRNSIR
Trigger: TCTAATGCTGTTCCTGTTGCATTTTGGACACTTGCA...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCGAGCTTTTAAACGAATaGTTTCCAAAACACACCATT +
Preference number: 4 (lower is better)
Translates to: AILSIIKCRNECKTPFLSELLNE*FPKHTI
Trigger: AATGGTGTGTTTTGGAAACCATTCGTTTAAAAGCTC...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACATCTATGCAGCCAAAATaGAGACAACATCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTSMQPK*RQHQQV
Trigger: GACTTGTTGATGTTGTCTCCATTTTGGCTGCATAGA...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCTCAGGAAAATACTTTaGATTTCTATGCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTLRKIL*ISMQPK
Trigger: TTTTGGCTGCATAGAAATCCAAAGTATTTTCCTGAG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGCTCAGGAAAATACTTTaGATTTCTATGCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GAILSIIKCRNECKTPFLLRKIL*ISMQPK
Trigger: TTTTGGCTGCATAGAAATCCAAAGTATTTTCCTGAG...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR TCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAGTTCCAATTGCTAGTTaGGAATCACCTCAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTVPIAS*ESPQEK
Trigger: TTTTTCTTGAGGTGATTCTCAACTAGCAATTGGAAC...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR GCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAAATCTTATCTTTGCCTaGTTTGCCAAACACAGAAGA +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTNLIFA*FAKHRR
Trigger: TCTTCTGTGTTTGGCAAAGCAGGCAAAGATAAGATT...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CCA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAGTGATGTTAGATTCTTaGTCTACTGTTGAAGATACC +
Preference number: 4 (lower is better)
Translates to: RYQTHAPFECVLELSPKTVMLDS*STVEDT
Trigger: GGTATCTTCAACAGTAGACCAAGAATCTAACATCAC...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTCACCTCCACTTCTCTTaGAATCTCAGCCAGCGCGGA +
Preference number: 5 (lower is better)
Translates to: SGLGAARWGSATPPEGPGHLHFS*NLSQRG
Trigger: TCCGCGCTGGCTGAGATTCAAAGAGAAGTGGAGGTG...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTATATTCAATTCGGCATaGCCCTTCCGGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: SGLGAARWGSATPPEGPGIFNSA*PFRLGD
Trigger: GTCCCCCAGCCGGAAGGGCAATGCCGAATTGAATAT...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTAGTTGTTCAGGTCCATaGTCCCATGAGTGCCTAAAT +
Preference number: 5 (lower is better)
Translates to: SGLGAARWGSATPPEGPGSCSGP*SHECLN
Trigger: ATTTAGGCACTCATGGGACAATGGACCTGAACAACT...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS CCA 90 bp GCAGAAAAGTGTGAAACAGTCCTGCCGTCCCTTGCTTCTTTTCTGTaGGCTACGGAACCTGTCGGGACTCCCAACCTTTCTGCTGCAACT +
Preference number: 5 (lower is better)
Translates to: AEKCETVLPSLASFL*ATEPVGTPNLSAAT
Trigger: AGTTGCAGCAGAAAGGTTGGGAGTCCCGACAGGTTCCGTAGCCCACAGAAAAGAAGCAAGGGACGGCAGGACTGTTTCACACTTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp TCAGGTCTAGGTGCTGCCAGGTGGGGTAGTGCCACTCCTCCAGAAGGCCCTGGTGCTCAGGAAAATACTTaGGATTTCTATGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SGLGAARWGSATPPEGPGAQENT*DFYAAK
Trigger: TTTGGCTGCATAGAAATCCAAAGTATTTTCCTGAGC...ACCAGGGCCTTCTGGAGGAGTGGCACTACCCCACCTGGCAGCACCTAGACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 90 bp GGAATCCAGCCCTTGATGCACGGGGGTCTACGCAAATTCTTCCGCTaGAGGAGTAAGAACAGAGCAAGGCAACCCAGGATTATAATCACT +
Preference number: 5 (lower is better)
Translates to: GIQPLMHGGLRKFFR*RSKNRARQPRIIIT
Trigger: AGTGATTATAATCCTGGGTTGCCTTGCTCTGTTCTTACTCCTTCAGCGGAAGAATTTGCGTAGACCCCCGTGCATCAAGGGCTGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 90 bp CTTTCCCAAACTCAAATCCAACTCCAATCCAAGGAATCCAGCCCTTaGTGCACGGGGGTCTACGCAAATTCTTCCGCTGAAGGAGTAAGA +
Preference number: 5 (lower is better)
Translates to: LSQTQIQLQSKESSP*CTGVYANSSAEGVR
Trigger: TCTTACTCCTTCAGCGGAAGAATTTGCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTTGGATTGGAGTTGGATTTGAGTTTGGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS GCA 90 bp TTAGAAGAGGGCCTGGCACAGATGAGATGTTCAAAAACCTTTTCTTaGAGGACACTGGAACTTCCCGCTTCCAAATGCCATGAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: LEEGLAQMRCSKTFS*RTLELPASKCHEAV
Trigger: GACTGCTTCATGGCATTTGGAAGCGGGAAGTTCCAGTGTCCTGCAAGAAAAGGTTTTTGAACATCTCATCTGTGCCAGGCCCTCTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476076.1
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCAAGGAATCCAGCCCTaGATGCACGGGGGTCTACGC +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTQGIQP*MHGGLR
Trigger: GCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTTG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGCAAGGAATCCAGCCCTaGATGCACGGGGGTCTACGC +
Preference number: 5 (lower is better)
Translates to: GAILSIIKCRNECKTPFLQGIQP*MHGGLR
Trigger: GCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTTG...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS GCA 90 bp GACAGGTATAGCAAGCACATCCCTAAGATCATCAACTCTCAGAGGTaGTCACTCAAAGAAGTTTTCCTCCACACTGAAAACCCTCCGTCT +
Preference number: 5 (lower is better)
Translates to: DRYSKHIPKIINSQR*SLKEVFLHTENPPS
Trigger: AGACGGAGGGTTTTCAGTGTGGAGGAAAACTTCTTTGAGTGAGCACCTCTGAGAGTTGATGATCTTAGGGATGTGCTTGCTATACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCACCTCCACTTCTCTTaGAATCTCAGCCAGCGCGGA +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTHLHFS*NLSQRG
Trigger: TCCGCGCTGGCTGAGATTCAAAGAGAAGTGGAGGTG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCCAGGTGATTTTTCCATaGTCGCTCCCTCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: AILSIIKCRNECKTPFLSQVIFP*SLPPTS
Trigger: GGAGGTGGGAGGGAGCGACAATGGAAAAATCACCTG...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCAGGTGATTTTTCCATaGTCGCTCCCTCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTQVIFP*SLPPTS
Trigger: GGAGGTGGGAGGGAGCGACAATGGAAAAATCACCTG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTCAGTCCTGCCGTCCCTaGCTTCTTTTCTGTGGGCTA +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTQSCRP*LLFCGL
Trigger: TAGCCCACAGAAAAGAAGCAAGGGACGGCAGGACTG...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCACAGAGCAAACCACCTaGCAGGACACTGGAACTTCC +
Preference number: 5 (lower is better)
Translates to: AILSIIKCRNECKTPFLSTEQTT*QDTGTS
Trigger: GGAAGTTCCAGTGTCCTGCAAGGTGGTTTGCTCTGT...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGACAGAGCAAACCACCTaGCAGGACACTGGAACTTCC +
Preference number: 5 (lower is better)
Translates to: GAILSIIKCRNECKTPFLTEQTT*QDTGTS
Trigger: GGAAGTTCCAGTGTCCTGCAAGGTGGTTTGCTCTGT...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 90 bp AACACAGAAGATATGCCTTCCATAATGGCCTTGTGGATATCAGGATaGGAAAGGACGTATGCAAGTGTCCAAAATGCAACAGGAACAGCA +
Preference number: 5 (lower is better)
Translates to: NTEDMPSIMALWISG*ERTYASVQNATGTA
Trigger: TGCTGTTCCTGTTGCATTTTGGACACTTGCATACGTCCTTTCTCATCCTGATATCCACAAGGCCATTATGGAAGGCATATCTTCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAATATTCAATTCGGCATaGCCCTTCCGGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: RYQTHAPFECVLELSPKTIFNSA*PFRLGD
Trigger: GTCCCCCAGCCGGAAGGGCAATGCCGAATTGAATAT...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 90 bp GGCTGTTGTTTTACACTGGAGTTTAAGCCATATCAATTTGCACAATaGCACAGCAAATCAGGCATCCTCTTGCAGGAATTAGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: GCCFTLEFKPYQFAQ*HSKSGILLQELEPR
Trigger: CCTTGGTTCTAATTCCTGCAAGAGGATGCCTGATTTGCTGTGTCATTGTGCAAATTGATATGGCTTAAACTCCAGTGTAAAACAACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS GCA 90 bp TGGAACTTCCCGCTTCCAAATGCCATGAAGCAGTCCAAGAAAGAGTaGTTCTCTAAATTTGCCTTTTTCCAACGTTCAGGTTTGAACAAT +
Preference number: 5 (lower is better)
Translates to: WNFPLPNAMKQSKKE*FSKFAFFQRSGLNN
Trigger: ATTGTTCAAACCTGAACGTTGGAAAAAGGCAAATTTAGAGAAGCACTCTTTCTTGGACTGCTTCATGGCATTTGGAAGCGGGAAGTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS GCA 90 bp TCTTCACTTTGCAAGCTACAATTTCTGAAGAAGTCTGGTGGTTCATaGTGCTCTTTCCTGTTTGTTTTTCTTGCAGGACACTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: SSLCKLQFLKKSGGS*CSFLFVFLAGHWNF
Trigger: GAAGTTCCAGTGTCCTGCAAGAAAAACAAACAGGAAAGAGCAGCATGAACCACCAGACTTCTTCAGAAATTGTAGCTTGCAAAGTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS TCA 90 bp AACACAGAAGATATGCCTTCCATAATGGCCTTGTGGATATCAGGATaGGAAAGGACGTATGCAAGTGTCCAAAATGCAACCATGGAATTA +
Preference number: 5 (lower is better)
Translates to: NTEDMPSIMALWISG*ERTYASVQNATMEL
Trigger: TAATTCCATGGTTGCATTTTGGACACTTGCATACGTCCTTTCTCATCCTGATATCCACAAGGCCATTATGGAAGGCATATCTTCTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480804.1
CDS GCA 90 bp AAAGGAGATGTCTTACTAAGTTGTTCAGGTCCATTGTCCCATGAGTaGCTAAATTCTCCAGTTGTTCATGTAATTCTTCAGTCAGTTGCC +
Preference number: 5 (lower is better)
Translates to: KGDVLLSCSGPLSHE*LNSPVVHVILQSVA
Trigger: GGCAACTGACTGAAGAATTACATGAACAACTGGAGAATTTAGGCACTCATGGGACAATGGACCTGAACAACTTAGTAAGACATCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTTCCAACGTTCAGGTTaGAACAATTCAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GAILSIIKCRNECKTPFLFQRSG*NNSGSG
Trigger: TCCTGAGCCTGAATTGTTCAAACCTGAACGTTGGAA...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCTTCCAACGTTCAGGTTaGAACAATTCAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AILSIIKCRNECKTPFLSFQRSG*NNSGSG
Trigger: TCCTGAGCCTGAATTGTTCAAACCTGAACGTTGGAA...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 90 bp ACTGTCTGCTATAATGAGACTCTTCACTTTGCAAGCTACAATTTCTaGAGAAGTCTGGTGGTTCATGCTGCTCTTTCCTGTTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TVCYNETLHFASYNF*RSLVVHAALSCLFF
Trigger: GAAAAACAAACAGGAAAGAGCAGCATGAACCACCAGACTTCTTCAGAAATTGTAGCTTGCAAAGTGAAGAGTCTCATTATAGCAGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS GCA 90 bp TCAGGTTTGAACAATTCAGGCTCAGGAAAATACTTTGGATTTCTATaGAGCCAAAATGGAGACAACATCAACAAGTCACCAGAAGGAATG +
Preference number: 5 (lower is better)
Translates to: SGLNNSGSGKYFGFL*SQNGDNINKSPEGM
Trigger: CATTCCTTCTGGTGACTTGTTGATGTTGTCTCCATTTTGGCTGCATAGAAATCCAAAGTATTTTCCTGAGCCTGAATTGTTCAAACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS GCA 90 bp AGTATTGCAGCCTTCCTCTTATTACACTCTCTTCTTATCCAAGCATaGCTTTATAAGCAGATTAATCTTGCCAAAGATCAGGGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: SIAAFLLLHSLLIQA*LYKQINLAKDQGCC
Trigger: ACAACAGCCCTGATCTTTGGCAAGATTAATCTGCTTATAAAGGCATGCTTGGATAAGAAGAGAGTGTAATAAGAGGAAGGCTGCAATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTATTAGTTCCATGTTTTaGTCCAGCACCTTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTISSMF*SSTFQK
Trigger: CTTCTGGAAGGTGCTGGACAAAAACATGGAACTAAT...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTTTATCTTTGCCTGCTTaGCCAAACACAGAAGATATG +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTLSLPA*PNTEDM
Trigger: CATATCTTCTGTGTTTGGCAAAGCAGGCAAAGATAA...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGGCTCAGGAAAATACTTaGGATTTCTATGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: GAILSIIKCRNECKTPFLAQENT*DFYAAK
Trigger: TTTGGCTGCATAGAAATCCAAAGTATTTTCCTGAGC...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGAGTGCTTCTCTAAATTaGCCTTTTTCCAACGTTCAG +
Preference number: 5 (lower is better)
Translates to: GAILSIIKCRNECKTPFLSASLN*PFSNVQ
Trigger: CTGAACGTTGGAAAAAGGCAAATTTAGAGAAGCACT...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTATTCTTGGTCTACTGTaGAAGATACCAAACACATGC +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTILGLL*KIPNTC
Trigger: GCATGTGTTTGGTATCTTCAACAGTAGACCAAGAAT...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAATTAGTTCCATGTTTTaGTCCAGCACCTTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RYQTHAPFECVLELSPKTISSMF*SSTFQK
Trigger: CTTCTGGAAGGTGCTGGACAAAAACATGGAACTAAT...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTAGACATTCTTTGGAATaGATGCTGTACGATAAACGA +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTRHSLE*MLYDKR
Trigger: TCGTTTATCGTACAGCATCAATTCCAAAGAATGTCT...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGGTGAGTTTTCCTTACTaGTTTCCGTCTCTACAATAT +
Preference number: 5 (lower is better)
Translates to: GAILSIIKCRNECKTPFLVSFPY*FPSLQY
Trigger: ATATTGTAGAGACGGAAACAAGTAAGGAAAACTCAC...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp CCATGTATTCCGGTCTCTATATTACTGAGAGTGATGTTAGATTCTTGGTCTACTGTGAGTTTTCCTTACTaGTTTCCGTCTCTACAATAT +
Preference number: 5 (lower is better)
Translates to: PCIPVSILLRVMLDSWSTVSFPY*FPSLQY
Trigger: ATATTGTAGAGACGGAAACAAGTAAGGAAAACTCAC...AGTAGACCAAGAATCTAACATCACTCTCAGTAATATAGAGACCGGAATACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GGTGCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGGGCATACCGTTATATTaGTGTTTCTATGCATTAGCA +
Preference number: 5 (lower is better)
Translates to: GAILSIIKCRNECKTPFLGIPLY*CFYALA
Trigger: TGCTAATGCATAGAAACACAAATATAACGGTATGCC...CAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp GCAATCCTGAGCATAATAAAGTGTAGAAATGAATGTAAGACACCATTCCTGTCCGGCATACCGTTATATTaGTGTTTCTATGCATTAGCA +
Preference number: 5 (lower is better)
Translates to: AILSIIKCRNECKTPFLSGIPLY*CFYALA
Trigger: TGCTAATGCATAGAAACACAAATATAACGGTATGCC...GGACAGGAATGGTGTCTTACATTCATTTCTACACTTTATTATGCTCAGGATTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS-3UTR CAA 90 bp AGATACCAAACACATGCACCATTTGAATGTGTTCTTGAACTAAGTCCTAAAACAAGTGCTTCTCTAAATTaGCCTTTTTCCAACGTTCAG +
Preference number: 5 (lower is better)
Translates to: RYQTHAPFECVLELSPKTSASLN*PFSNVQ
Trigger: CTGAACGTTGGAAAAAGGCAAATTTAGAGAAGCACT...TGTTTTAGGACTTAGTTCAAGAACACATTCAAATGGTGCATGTGTTTGGTATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS CAA 90 bp GGGCTACGGAACCTGTCGGGACTCCCAACCTTTCTGCTGCAACTTTaGCAGCTCTCCTTCGTAACTGTAGCTTCCTTCCTCTGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: GLRNLSGLPTFLLQL*QLSFVTVASFLCPS
Trigger: ACTGGGACAGAGGAAGGAAGCTACAGTTACGAAGGAGAGCTGCAAAAGTTGCAGCAGAAAGGTTGGGAGTCCCGACAGGTTCCGTAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS CAA 90 bp AGCACCTTCCAGAAGCAGAAAAGTGTGAAACAGTCCTGCCGTCCCTaGCTTCTTTTCTGTGGGCTACGGAACCTGTCGGGACTCCCAACC +
Preference number: 6 (lower is better)
Translates to: STFQKQKSVKQSCRP*LLFCGLRNLSGLPT
Trigger: GGTTGGGAGTCCCGACAGGTTCCGTAGCCCACAGAAAAGAAGCAAGGGACGGCAGGACTGTTTCACACTTTTCTGCTTCTGGAAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS CCA 72 bp TGTGAAACAGTCCTGCCGTCCCTTGCTTCTTTTCTGTaGGCTACGGAACCTGTCGGGACTCCCAACCTTTCT +
Preference number: 6 (lower is better)
Translates to: CETVLPSLASFL*ATEPVGTPNLS
Trigger: AGAAAGGTTGGGAGTCCCGACAGGTTCCGTAGCCCACAGAAAAGAAGCAAGGGACGGCAGGACTGTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 72 bp CCCTTGATGCACGGGGGTCTACGCAAATTCTTCCGCTaGAGGAGTAAGAACAGAGCAAGGCAACCCAGGATT +
Preference number: 6 (lower is better)
Translates to: PLMHGGLRKFFR*RSKNRARQPRI
Trigger: AATCCTGGGTTGCCTTGCTCTGTTCTTACTCCTTCAGCGGAAGAATTTGCGTAGACCCCCGTGCATCAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS CAA 72 bp CAGAAGCAGAAAAGTGTGAAACAGTCCTGCCGTCCCTaGCTTCTTTTCTGTGGGCTACGGAACCTGTCGGGA +
Preference number: 6 (lower is better)
Translates to: QKQKSVKQSCRP*LLFCGLRNLSG
Trigger: TCCCGACAGGTTCCGTAGCCCACAGAAAAGAAGCAAGGGACGGCAGGACTGTTTCACACTTTTCTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 72 bp AAGTCAGGGACCATGTTGGTCTTCCTCAGTGCTCTCTaGAGCTTAGAAGAGGGCCTGGCACAGATGAGATGT +
Preference number: 6 (lower is better)
Translates to: KSGTMLVFLSAL*SLEEGLAQMRC
Trigger: ACATCTCATCTGTGCCAGGCCCTCTTCTAAGCTTCAGAGAGCACTGAGGAAGACCAACATGGTCCCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476076.1
CDS GCA 72 bp AGCACCTTCCAGAAGCAGAAAAGTGTGAAACAGTCCTaGCGTCCCTTGCTTCTTTTCTGTGGGCTACGGAAC +
Preference number: 6 (lower is better)
Translates to: STFQKQKSVKQS*RPLLLFCGLRN
Trigger: GTTCCGTAGCCCACAGAAAAGAAGCAAGGGACGGCAGGACTGTTTCACACTTTTCTGCTTCTGGAAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 72 bp ACTCAAATCCAACTCCAATCCAAGGAATCCAGCCCTTaGTGCACGGGGGTCTACGCAAATTCTTCCGCTGAA +
Preference number: 6 (lower is better)
Translates to: TQIQLQSKESSP*CTGVYANSSAE
Trigger: TTCAGCGGAAGAATTTGCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTTGGATTGGAGTTGGATTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS GCA 72 bp TTCTATGAAGTCAGGGACCATGTTGGTCTTCCTCAGTaGTCTCTGAAGCTTAGAAGAGGGCCTGGCACAGAT +
Preference number: 6 (lower is better)
Translates to: FYEVRDHVGLPQ*SLKLRRGPGTD
Trigger: ATCTGTGCCAGGCCCTCTTCTAAGCTTCAGAGAGCACTGAGGAAGACCAACATGGTCCCTGACTTCATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476076.1
CDS CAA 72 bp GGGCCTGGCACAGATGAGATGTTCAAAAACCTTTTCTaGCAGGACACTGGAACTTCCCGCTTCCAAATGCCA +
Preference number: 6 (lower is better)
Translates to: GPGTDEMFKNLF*QDTGTSRFQMP
Trigger: TGGCATTTGGAAGCGGGAAGTTCCAGTGTCCTGCAAGAAAAGGTTTTTGAACATCTCATCTGTGCCAGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476076.1
CDS GCA 72 bp GGCCTGGCACAGATGAGATGTTCAAAAACCTTTTCTTaGAGGACACTGGAACTTCCCGCTTCCAAATGCCAT +
Preference number: 6 (lower is better)
Translates to: GLAQMRCSKTFS*RTLELPASKCH
Trigger: ATGGCATTTGGAAGCGGGAAGTTCCAGTGTCCTGCAAGAAAAGGTTTTTGAACATCTCATCTGTGCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476076.1
CDS TCA 72 bp GATATGCCTTCCATAATGGCCTTGTGGATATCAGGATaGGAAAGGACGTATGCAAGTGTCCAAAATGCAACC +
Preference number: 6 (lower is better)
Translates to: DMPSIMALWISG*ERTYASVQNAT
Trigger: GGTTGCATTTTGGACACTTGCATACGTCCTTTCTCATCCTGATATCCACAAGGCCATTATGGAAGGCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480804.1
CDS TCA 72 bp GATATGCCTTCCATAATGGCCTTGTGGATATCAGGATaGGAAAGGACGTATGCAAGTGTCCAAAATGCAACA +
Preference number: 6 (lower is better)
Translates to: DMPSIMALWISG*ERTYASVQNAT
Trigger: TGTTGCATTTTGGACACTTGCATACGTCCTTTCTCATCCTGATATCCACAAGGCCATTATGGAAGGCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275016.3
ENST00000619708.4
CDS TCA 72 bp TGTTCATGTAATTCTTCAGTCAGTTGCCCAGTAAACTaGTGGAGATTGACAGTCCCCATTTTCCCTTTCAAC +
Preference number: 6 (lower is better)
Translates to: CSCNSSVSCPVN*WRLTVPIFPFN
Trigger: GTTGAAAGGGAAAATGGGGACTGTCAATCTCCATCAGTTTACTGGGCAACTGACTGAAGAATTACATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS CAA 72 bp GCTGTTGTTTTACACTGGAGTTTAAGCCATATCAATTaGCACAATGACACAGCAAATCAGGCATCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: AVVLHWSLSHIN*HNDTANQASSC
Trigger: GCAAGAGGATGCCTGATTTGCTGTGTCATTGTGCAAATTGATATGGCTTAAACTCCAGTGTAAAACAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS TCA 72 bp TATAATGAGACTCTTCACTTTGCAAGCTACAATTTCTaGAGAAGTCTGGTGGTTCATGCTGCTCTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: YNETLHFASYNF*RSLVVHAALSC
Trigger: ACAGGAAAGAGCAGCATGAACCACCAGACTTCTTCAGAAATTGTAGCTTGCAAAGTGAAGAGTCTCATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS CCA 72 bp TTCACTTTGCAAGCTACAATTTCTGAAGAAGTCTGGTaGTTCATGCTGCTCTTTCCTGTTTGTTTTTCTTGC +
Preference number: 6 (lower is better)
Translates to: FTLQATISEEVW*FMLLFPVCFSC
Trigger: GCAAGAAAAACAAACAGGAAAGAGCAGCATGAACCACCAGACTTCTTCAGAAATTGTAGCTTGCAAAGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS CCA 72 bp CTCTTCACTTTGCAAGCTACAATTTCTGAAGAAGTCTaGTGGTTCATGCTGCTCTTTCCTGTTTGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: LFTLQATISEEV*WFMLLFPVCFS
Trigger: AGAAAAACAAACAGGAAAGAGCAGCATGAACCACCAGACTTCTTCAGAAATTGTAGCTTGCAAAGTGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS CAA 72 bp GATAAAGGAGATGTCTTACTAAGTTGTTCAGGTCCATaGTCCCATGAGTGCCTAAATTCTCCAGTTGTTCAT +
Preference number: 6 (lower is better)
Translates to: DKGDVLLSCSGP*SHECLNSPVVH
Trigger: ATGAACAACTGGAGAATTTAGGCACTCATGGGACAATGGACCTGAACAACTTAGTAAGACATCTCCTTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS CAA 72 bp AATGTGAGACTGTCTGCTATAATGAGACTCTTCACTTaGCAAGCTACAATTTCTGAAGAAGTCTGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: NVRLSAIMRLFT*QATISEEVWWF
Trigger: GAACCACCAGACTTCTTCAGAAATTGTAGCTTGCAAAGTGAAGAGTCTCATTATAGCAGACAGTCTCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS CAA 90 bp TACACTCTCTTCTTATCCAAGCATGCCTTTATAAGCAGATTAATCTaGCCAAAGATCAGGGCTGTTGTTTTACACTGGAGTTTAAGCCAT +
Preference number: 6 (lower is better)
Translates to: YTLFLSKHAFISRLI*PKIRAVVLHWSLSH
Trigger: ATGGCTTAAACTCCAGTGTAAAACAACAGCCCTGATCTTTGGCAAGATTAATCTGCTTATAAAGGCATGCTTGGATAAGAAGAGAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS TCA 72 bp AGATGTCTTACTAAGTTGTTCAGGTCCATTGTCCCATaGGTGCCTAAATTCTCCAGTTGTTCATGTAATTCT +
Preference number: 6 (lower is better)
Translates to: RCLTKLFRSIVP*VPKFSSCSCNS
Trigger: AGAATTACATGAACAACTGGAGAATTTAGGCACTCATGGGACAATGGACCTGAACAACTTAGTAAGACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275016.3
CDS TCA 72 bp TTTACACTGGAGTTTAAGCCATATCAATTTGCACAATaGCACAGCAAATCAGGCATCCTCTTGCAGGAATTA +
Preference number: 6 (lower is better)
Translates to: FTLEFKPYQFAQ*HSKSGILLQEL
Trigger: TAATTCCTGCAAGAGGATGCCTGATTTGCTGTGTCATTGTGCAAATTGATATGGCTTAAACTCCAGTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489657.1
CDS CAA 72 bp TTCTTATCCAAGCATGCCTTTATAAGCAGATTAATCTaGCCAAAGATCAGGGCTGTTGTTTTACACTGGAGT +
Preference number: 6 (lower is better)
Translates to: FLSKHAFISRLI*PKIRAVVLHWS
Trigger: ACTCCAGTGTAAAACAACAGCCCTGATCTTTGGCAAGATTAATCTGCTTATAAAGGCATGCTTGGATAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489657.1