RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP2U1 (Homo sapiens)

Ensembl gene IDs: ENSG00000155016

Ensembl transcript IDs: ENST00000332884.11, ENST00000508453.1, ENST00000513302.1

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCATTCACAAGACAACTGGGCATCCACTAAGACCAAGGCACTGTaGGGGAGGCAAACAGCACAACATCCTCACCTCAAGGAGCTCAGC +
Preference number: 1 (lower is better)
Translates to: SHSQDNWASTKTKAL*GRQTAQHPHLKELS
Trigger: GCTGAGCTCCTTGAGGTGAGGATGTTGTGCTGTTTGCCTCCCTCACAGTGCCTTGGTCTTAGTGGATGCCCAGTTGTCTTGTGAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR TCA 90 bp CAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGTaGGGTCCCTGGATATGGCCTAGTCTCCAGGTGGTGGGAGTTTAC +
Preference number: 1 (lower is better)
Translates to: QYEQRSCFSPLGKSV*GPWIWPSLQVVGVY
Trigger: GTAAACTCCCACCACCTGGAGACTAGGCCATATCCAGGGACCTCACACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR TCA 90 bp GGGCCTGGTGGCAGGGACGCTAGGACAGGAATGTTCAGTATAGTTTaGAAGCAGAATCCTTTCCTGATGAGTCCCAGTATCAAAATCCCC +
Preference number: 1 (lower is better)
Translates to: GPGGRDARTGMFSIV*KQNPFLMSPSIKIP
Trigger: GGGGATTTTGATACTGGGACTCATCAGGAAAGGATTCTGCTTTCAAACTATACTGAACATTCCTGTCCTAGCGTCCCTGCCACCAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR TCA 90 bp CCCAAATCACAGACCTGCATTACTAAAATGGCTGAAGTATCCTGCTaGGGAATCCTCCAAGATGAAACCTCCCAGTGTGCTCTACCCTCC +
Preference number: 1 (lower is better)
Translates to: PKSQTCITKMAEVSC*GILQDETSQCALPS
Trigger: GGAGGGTAGAGCACACTGGGAGGTTTCATCTTGGAGGATTCCTCAGCAGGATACTTCAGCCATTTTAGTAATGCAGGTCTGTGATTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR TCA 90 bp TGTAGAGCCAGCATGAGGAAAGGTTCAGGAATGTGGTTGCTCATATaGCTGCTATGCTTACTTCTGTACATGGAGCACTGTGGGAGAATA +
Preference number: 1 (lower is better)
Translates to: CRASMRKGSGMWLLI*LLCLLLYMEHCGRI
Trigger: TATTCTCCCACAGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAACCTTTCCTCATGCTGGCTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR CCA 90 bp GTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTGTaGGAGAATAAAAGAAAGGGGTGGTCATTCCTTAGAGCATGTTCT +
Preference number: 1 (lower is better)
Translates to: VAHMTAMLTSVHGAL*ENKRKGWSFLRACS
Trigger: AGAACATGCTCTAAGGAATGACCACCCCTTTCTTTTATTCTCCCACAGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR TCA 90 bp AATATACTTGTTAATGCTGAGTTATTAGTGCAATTCAAAAGCATATaGATTCCATATCAAGAACAAACTCTCCCGCCCAAGGTACAGTGT +
Preference number: 1 (lower is better)
Translates to: NILVNAELLVQFKSI*IPYQEQTLPPKVQC
Trigger: ACACTGTACCTTGGGCGGGAGAGTTTGTTCTTGATATGGAATTCATATGCTTTTGAATTGCACTAATAACTCAGCATTAACAAGTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR CCA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGAAGGATCAGATGCATTaGGCCTGGTGGCAGGGACGC +
Preference number: 2 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVKDQMH*AWWQGR
Trigger: GCGTCCCTGCCACCAGGCCCAATGCATCTGATCCTT...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR TCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTAGGAATCCTCCAAGATaGAACCTCCCAGTGTGCTCT +
Preference number: 2 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGRNPPR*NLPVCS
Trigger: AGAGCACACTGGGAGGTTTCATCTTGGAGGATTCCT...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR TCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTGGTTACCACCCCTGCTaGAAACTGCTTTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTGYHPC*KLLFQR
Trigger: CCTCTGGAAAAGCAGTTTTCAGCAGGGGTGGTAACC...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR TCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTCCAGCTTGGATCCACTaGGTTGCTGGATTCACTGTC +
Preference number: 2 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPPAWIH*VAGFTV
Trigger: GACAGTGAATCCAGCAACTCAGTGGATCCAAGCTGG...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR TCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTAGGAATCCTCCAAGATaGAACCTCCCAGTGTGCTCT +
Preference number: 2 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTRNPPR*NLPVCS
Trigger: AGAGCACACTGGGAGGTTTCATCTTGGAGGATTCCT...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR TCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCGGTTACCACCCCTGCTaGAAACTGCTTTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: STPIIMITKNHTHTFPNSGYHPC*KLLFQR
Trigger: CCTCTGGAAAAGCAGTTTTCAGCAGGGGTGGTAACC...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR GCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCTATTCAAGGATCAGATaGATTGGGCCTGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSYSRIR*IGPGGR
Trigger: CCTGCCACCAGGCCCAATGCATCTGATCCTTGAATA...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR TCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTGCTGAAGTATCCTGCTaGGGAATCCTCCAAGATGAA +
Preference number: 2 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTAEVSC*GILQDE
Trigger: TTCATCTTGGAGGATTCCTCAGCAGGATACTTCAGC...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR GCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCTATTCAAGGATCAGATaGATTGGGCCTGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: STPIIMITKNHTHTFPNSYSRIR*IGPGGR
Trigger: CCTGCCACCAGGCCCAATGCATCTGATCCTTGAATA...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR CCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTAAGGATCAGATGCATTaGGCCTGGTGGCAGGGACGC +
Preference number: 2 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVKDQMH*AWWQGR
Trigger: GCGTCCCTGCCACCAGGCCCAATGCATCTGATCCTT...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR CCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTAGATTGGCCCATCGGTaGAAGCCACTGCAAGTAAAA +
Preference number: 2 (lower is better)
Translates to: KASSTPIIMITKNHTHTFRLAHR*KPLQVK
Trigger: TTTTACTTGCAGTGGCTTCCACCGATGGGCCAATCT...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR TCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCAAAGCATTCCAGGCTaGACACCACTTTCATGTTGT +
Preference number: 2 (lower is better)
Translates to: KASSTPIIMITKNHTHTFQSIPG*TPLSCC
Trigger: ACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTG...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR GCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTCCCAAATCACAGACCTaGATTACTAAAATGGCTGAA +
Preference number: 2 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGPKSQT*ITKMAE
Trigger: TTCAGCCATTTTAGTAATGCAGGTCTGTGATTTGGG...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR CCA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGCAAGCCCAAAGAAGCTaGCATAGAATCTGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: KESEFFESIFKDQMHWAWQAQRS*HRICAE
Trigger: CTCAGCACAGATTCTATGCCAGCTTCTTTGGGCTTG...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR CAA 90 bp AGGAATGTGCTAAATCAAAGGAAAAATCTAGCCTCATGTTCACAATaGCCCTGGAATGCCATTCCCAGACTGAGATCTAACTACACAGAG +
Preference number: 2 (lower is better)
Translates to: RNVLNQRKNLASCSQ*PWNAIPRLRSNYTE
Trigger: CTCTGTGTAGTTAGATCTCAGTCTGGGAATGGCATTCCAGGGCAATTGTGAACATGAGGCTAGATTTTTCCTTTGATTTAGCACATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR TCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAACCAGCTTGGATCCACTaGGTTGCTGGATTCACTGTC +
Preference number: 2 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKPAWIH*VAGFTV
Trigger: GACAGTGAATCCAGCAACTCAGTGGATCCAAGCTGG...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR GCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGGATTCACTGTCCTTTaGAGTAGGAAGAATCTGCTT +
Preference number: 2 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPGFTVL*SRKNLL
Trigger: AAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR GCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCGGATTCACTGTCCTTTaGAGTAGGAAGAATCTGCTT +
Preference number: 2 (lower is better)
Translates to: STPIIMITKNHTHTFPNSGFTVL*SRKNLL
Trigger: AAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR TCA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGATCAAGAAGTGGTTCTaGAAGTGTTCTTTAGTCACA +
Preference number: 2 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVIKKWF*KCSLVT
Trigger: TGTGACTAAAGAACACTTTCAGAACCACTTCTTGAT...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR GCA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGCCCAAATCACAGACCTaGATTACTAAAATGGCTGAA +
Preference number: 2 (lower is better)
Translates to: KESEFFESIFKDQMHWAWPKSQT*ITKMAE
Trigger: TTCAGCCATTTTAGTAATGCAGGTCTGTGATTTGGG...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR GCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCAGTAGAAAGGAATTCTaGCAAGAAGCTACTAAAGAA +
Preference number: 2 (lower is better)
Translates to: STPIIMITKNHTHTFPNSSRKEF*QEATKE
Trigger: TTCTTTAGTAGCTTCTTGGCAGAATTCCTTTCTACT...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR CCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTCCTGCATTACTAAAATaGCTGAAGTATCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVPALLK*LKYPAE
Trigger: CTCAGCAGGATACTTCAGCCATTTTAGTAATGCAGG...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR TCA 72 bp CAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGTaGGGTCCCTGGATATGGCCTAGTCTCCAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: QRSCFSPLGKSV*GPWIWPSLQVV
Trigger: CACCACCTGGAGACTAGGCCATATCCAGGGACCTCACACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR TCA 72 bp CAAGACAACTGGGCATCCACTAAGACCAAGGCACTGTaGGGGAGGCAAACAGCACAACATCCTCACCTCAAG +
Preference number: 3 (lower is better)
Translates to: QDNWASTKTKAL*GRQTAQHPHLK
Trigger: CTTGAGGTGAGGATGTTGTGCTGTTTGCCTCCCTCACAGTGCCTTGGTCTTAGTGGATGCCCAGTTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR CAA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGCAAGGATCAGATGCATaGGGCCTGGTGGCAGGGACG +
Preference number: 3 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVQGSDA*GLVAGT
Trigger: CGTCCCTGCCACCAGGCCCAATGCATCTGATCCTTG...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR CAA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTACCTCTGAGCCCAGCTaGGATCCACTGAGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: NKKIVTEQAQRSWHRICATSEPS*DPLSCW
Trigger: CCAGCAACTCAGTGGATCCAAGCTGGGCTCAGAGGT...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR TCA 72 bp CAGACCTGCATTACTAAAATGGCTGAAGTATCCTGCTaGGGAATCCTCCAAGATGAAACCTCCCAGTGTGCT +
Preference number: 3 (lower is better)
Translates to: QTCITKMAEVSC*GILQDETSQCA
Trigger: AGCACACTGGGAGGTTTCATCTTGGAGGATTCCTCAGCAGGATACTTCAGCCATTTTAGTAATGCAGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR TCA 72 bp TTGAGCAGGACAATTCTTCACTGTATAGGACTACCTTaGCATTTAGCATCCTGGTCCCATGGCAGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LSRTILHCIGLP*HLASWSHGSRR
Trigger: CCTTCTGCTGCCATGGGACCAGGATGCTAAATGTCAAGGTAGTCCTATACAGTGAAGAATTGTCCTGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR TCA 72 bp CATGTTCACAATTGCCCTGGAATGCCATTCCCAGACTaGGATCTAACTACACAGAGTATGGCTAACGGCAGA +
Preference number: 3 (lower is better)
Translates to: HVHNCPGMPFPD*DLTTQSMANGR
Trigger: TCTGCCGTTAGCCATACTCTGTGTAGTTAGATCTCAGTCTGGGAATGGCATTCCAGGGCAATTGTGAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR CAA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTACCTCTGAGCCCAGCTaGGATCCACTGAGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVTSEPS*DPLSCW
Trigger: CCAGCAACTCAGTGGATCCAAGCTGGGCTCAGAGGT...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR-3UTR CAA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGGGAAATCCTGGCATCTaGAGCAGGACAATTCTTCAC +
Preference number: 3 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVGNPGI*SRTILH
Trigger: GTGAAGAATTGTCCTGCTCAAGATGCCAGGATTTCC...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR TCA 72 bp AGCATGAGGAAAGGTTCAGGAATGTGGTTGCTCATATaGCTGCTATGCTTACTTCTGTACATGGAGCACTGT +
Preference number: 3 (lower is better)
Translates to: SMRKGSGMWLLI*LLCLLLYMEHC
Trigger: ACAGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAACCTTTCCTCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
3UTR-3UTR CAA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTCTTGGATCCACTGAGTaGCTGGATTCACTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: NKKIVTEQAQRSWHRICALGSTE*LDSLSF
Trigger: AAAGGACAGTGAATCCAGCAACTCAGTGGATCCAAG...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
3UTR CCA 72 bp ATGACTGCTATGCTTACTTCTGTACATGGAGCACTGTaGGAGAATAAAAGAAAGGGGTGGTCATTCCTTAGA +
Preference number: 3 (lower is better)
Translates to: MTAMLTSVHGAL*ENKRKGWSFLR
Trigger: TCTAAGGAATGACCACCCCTTTCTTTTATTCTCCCACAGTGCTCCATGTACAGAAGTAAGCATAGCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTCGGCCCTGGTCCTGCTaGTCAGCCAGCTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGRPWSC*SASSAA
Trigger: GGCGGCGGAGCTGGCTGAGCAGCAGGACCAGGGCCG...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTGCGCACGCAGCTGCCTaGCCCGCGGCGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAAHAAA*PAAPVS
Trigger: GGACACTGGCGCCGCGGGTCAGGCAGCTGCGTGCGC...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCCCCGCGGGCGGTCGCTaGAGACCTCGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSPAGGR*RPRPAA
Trigger: TGCAGCAGGCCGAGGTCTTCAGCGACCGCCCGCGGG...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTAGACGCGCACGCAGCTaGCTGACCCGCGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTRRARS*LTRGAS
Trigger: ACTGGCGCCGCGGGTCAGGCAGCTGCGTGCGCGTCT...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTAAGACCTCGGCCTGCTaGACCAGCGCCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTKTSAC*TSASRT
Trigger: CGTGCGCGAGGCGCTGGTGCAGCAGGCCGAGGTCTT...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGTTCCCCTTGCTGCCTaGAGGAGACGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGVPLAA*RRRARS
Trigger: GCTGCGTGCGCGTCTCCTCCAGGCAGCAAGGGGAAC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGCCTCGCGCACGCTGTaGAAGTCGCTGAGGACCACC +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGASRTL*KSLRTT
Trigger: GGTGGTCCTCAGCGACTTCCACAGCGTGCGCGAGGC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGGAGGCAGCAGCACGTaGCCGAAGTTGCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGGGSST*PKLPTR
Trigger: TCTGGTGGGCAACTTCGGTCACGTGCTGCTGCCTCC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGCACCTGCGGGCCTATaGCCGAGGGATCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGAPAGL*PRDQSL
Trigger: CAGGGATTGATCCCTCGGTCATAGGCCCGCAGGTGC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTTACACGCGGGCTAGGTaGGCCAGGAGCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFYTRAR*ARSTCG
Trigger: CCCGCAGGTGCTCCTGGCTCACCTAGCCCGCGTGTA...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTTGGTCACGATGGAGATaGGCGGCACCCGCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICWSRWR*AAPAGG
Trigger: ACCGCCCGCGGGTGCCGCTCATCTCCATCGTGACCA...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTGCCTCGGGTTCCCCTTaGTGCCTGGAGGAGACGCGC +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFASGSP*CLEETR
Trigger: GCGCGTCTCCTCCAGGCAGCAAGGGGAACCCGAGGC...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCCTGAAGACCTCGGCCTaGTGCACCAGCGCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSLKTSA*CTSASR
Trigger: GCGCGAGGCGCTGGTGCAGCAGGCCGAGGTCTTCAG...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTCTGAAGACCTCGGCCTaGTGCACCAGCGCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICLKTSA*CTSASR
Trigger: GCGCGAGGCGCTGGTGCAGCAGGCCGAGGTCTTCAG...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTCGCTGTGGAAGTCGCTaGGGACCACCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGRCGSR*GPPPGS
Trigger: ACTACCTGGTGGTGGTCCTCAGCGACTTCCACAGCG...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTCCCGCGGGCGGTCGCTaGAGACCTCGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVPAGGR*RPRPAA
Trigger: TGCAGCAGGCCGAGGTCTTCAGCGACCGCCCGCGGG...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTGCACGTGACCGAAGTTaGCCACCAGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICARDRS*PPEARA
Trigger: CGCCCTGGCCTCTGGTGGGCAACTTCGGTCACGTGC...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATCGGCCCTGGTCCTGCTaGTCAGCCAGCTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYRPWSC*SASSAA
Trigger: GGCGGCGGAGCTGGCTGAGCAGCAGGACCAGGGCCG...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTCAATCCCTGCGGCCCTaGTCCTGCTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPQSLRP*SCCSAS
Trigger: GCTGGCTGAGCAGCAGGACCAGGGCCGCAGGGATTG...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTGCCTCGCGCACGCTGTaGAAGTCGCTGAGGACCACC +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFASRTL*KSLRTT
Trigger: GGTGGTCCTCAGCGACTTCCACAGCGTGCGCGAGGC...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTGCACCTGCGGGCCTATaGCCGAGGGATCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICAPAGL*PRDQSL
Trigger: CAGGGATTGATCCCTCGGTCATAGGCCCGCAGGTGC...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTCGAGGGATCAATCCCTaGGGCCCTGGTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICRGINP*GPGPAA
Trigger: AGCAGCAGGACCAGGGCCGCAGGGATTGATCCCTCG...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTCAATCCCTGCGGCCCTaGTCCTGCTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAQSLRP*SCCSAS
Trigger: GCTGGCTGAGCAGCAGGACCAGGGCCGCAGGGATTG...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATTGGTCACGATGGAGATaGGCGGCACCCGCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYWSRWR*AAPAGG
Trigger: ACCGCCCGCGGGTGCCGCTCATCTCCATCGTGACCA...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTAAGACCTCGGCCTGCTaGACCAGCGCCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVKTSAC*TSASRT
Trigger: CGTGCGCGAGGCGCTGGTGCAGCAGGCCGAGGTCTT...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGGAACAGGTGAGTTCTaGAGGCTGGGAAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGGTGEF*RLGSPR
Trigger: TCTTGGACTTCCCAGCCTTCAGAACTCACCTGTTCC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR GCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTGCACGTGACCGAAGTTaGCCACCAGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVARDRS*PPEARA
Trigger: CGCCCTGGCCTCTGGTGGGCAACTTCGGTCACGTGC...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGATAGCACTGGCATCTaGCAAGGGCCTTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGDSTGI*QGPSCL
Trigger: AAGGCATGAAGGCCCTTGCCAGATGCCAGTGCTATC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR TCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCGCCAAGGGCATATGTTaGCCAGGAGGACTTGACTGT +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSAKGIC*PGGLDC
Trigger: ACAGTCAAGTCCTCCTGGTCAACATATGCCCTTGGC...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCGCCTCTGCACTTCCATaGTGGTGGCTTCTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSASALP*WWLLCR
Trigger: CCTACACAGAAGCCACCATCATGGAAGTGCAGAGGC...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTTTTCCAAACTCCCTCTaGAGGGGTTACCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPFPNSL*RGYHPC
Trigger: GCAGGGGTGGTAACCCCTTCAGAGGGAGTTTGGAAA...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCTTTCCAAACTCCCTCTaGAGGGGTTACCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSFPNSL*RGYHPC
Trigger: GCAGGGGTGGTAACCCCTTCAGAGGGAGTTTGGAAA...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAATCGGGTTCCCCTTGCTaGCTGGAGGAGACGCGCACG +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKSGSPC*LEETRT
Trigger: CGTGCGCGTCTCCTCCAGGCAGCAAGGGGAACCCGA...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATCGAGGGATCAATCCCTaGGGCCCTGGTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYRGINP*GPGPAA
Trigger: AGCAGCAGGACCAGGGCCGCAGGGATTGATCCCTCG...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATCGCTGTGGAAGTCGCTaGGGACCACCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYRCGSR*GPPPGS
Trigger: ACTACCTGGTGGTGGTCCTCAGCGACTTCCACAGCG...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGAAGGTACATGTCTATaGAGTCCTGAGGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGEGTCL*SPEGSL
Trigger: GAGAGAACCCTCAGGACTTCATAGACATGTACCTTC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTTTCTCTGAGGTCATATaGGGAATGGCAAGCGGCACC +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICFSEVI*GMASGT
Trigger: GGTGCCGCTTGCCATTCCTCATATGACCTCAGAGAA...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAGCTTGGATCCACTaGGTTGCTGGATTCACTGTC +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFPAWIH*VAGFTV
Trigger: GACAGTGAATCCAGCAACTCAGTGGATCCAAGCTGG...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGAGGAATCCTCCAAGATaGAACCTCCCAGTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVRNPPR*NLPVCS
Trigger: AGAGCACACTGGGAGGTTTCATCTTGGAGGATTCCT...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCTGTCCAAGGAACAGGTaGGTTCTGAAGGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSCPRNR*VLKAGK
Trigger: CTTCCCAGCCTTCAGAACTCACCTGTTCCTTGGACA...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCGACGGGACCATAATGTaGAAACACAACCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSDGTIM*KHNPLL
Trigger: GAGAAGGGGGTTGTGTTTGCACATTATGGTCCCGTC...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGACCACAGTTAGCCTCTaGACTTCCATGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVTTVSL*TSMMVA
Trigger: AGCCACCATCATGGAAGTGCAGAGGCTAACTGTGGT...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTCCTCATGTTCACAATTaGCCTGGAATGCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGPHVHN*PGMPFP
Trigger: TGGGAATGGCATTCCAGGGCAATTGTGAACATGAGG...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCAGGTCATATGAGGAATaGCAAGCGGCACCACCACAG +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSRSYEE*QAAPPQ
Trigger: CTGTGGTGGTGCCGCTTGCCATTCCTCATATGACCT...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTCACTGGGGGAAATCCTaGCATCTTGAGCAGGACAAT +
Preference number: 4 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTHWGKS*HLEQDN
Trigger: ATTGTCCTGCTCAAGATGCCAGGATTTCCCCCAGTG...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGAGGGGTAGCCTGTTATaGGATCAAGTGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVRGSLL*DQVVAE
Trigger: TTCTGCCACCACTTGATCCCATAACAGGCTACCCCT...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTTTGACCAGGAGGACTTaGCTGTTCAGACAGATTTCT +
Preference number: 4 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGLTRRT*LFRQIS
Trigger: AGAAATCTGTCTGAACAGTCAAGTCCTCCTGGTCAA...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGTTCTCTGAGGTCATATaGGGAATGGCAAGCGGCACC +
Preference number: 4 (lower is better)
Translates to: KESEFFESIFKDQMHWAWFSEVI*GMASGT
Trigger: GGTGCCGCTTGCCATTCCTCATATGACCTCAGAGAA...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTGAGCACTGTGTTCTCTaGGGTCATATGAGGAATGGC +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFEHCVL*GHMRNG
Trigger: GCCATTCCTCATATGACCTCAGAGAACACAGTGCTC...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTAGGAATCCTCCAAGATaGAACCTCCCAGTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPRNPPR*NLPVCS
Trigger: AGAGCACACTGGGAGGTTTCATCTTGGAGGATTCCT...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTAAGACCAAGGCACTGTaGGGGAGGCAAACAGCACAA +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAKTKAL*GRQTAQ
Trigger: TTGTGCTGTTTGCCTCCCTCACAGTGCCTTGGTCTT...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTACCACAGTTAGCCTCTaGACTTCCATGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFTTVSL*TSMMVA
Trigger: AGCCACCATCATGGAAGTGCAGAGGCTAACTGTGGT...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTTATTCAAGGATCAGATaGATTGGGCCTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICYSRIR*IGPGGR
Trigger: CCTGCCACCAGGCCCAATGCATCTGATCCTTGAATA...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTCCGGTTTCTCCCAAATaGCTGGGTCTCTATGTACTG +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICPVSPK*LGLYVL
Trigger: CAGTACATAGAGACCCAGCCATTTGGGAGAAACCGG...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCGATCCACTGAGTTGCTaGATTCACTGTCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSDPLSC*IHCPLQ
Trigger: CTGCAAAGGACAGTGAATCCAGCAACTCAGTGGATC...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTGGCCTAGTCTCCAGGTaGTGGGAGTTTACATTCTGT +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFGLVSR*WEFTFC
Trigger: ACAGAATGTAAACTCCCACCACCTGGAGACTAGGCC...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCATGTCTATGAAGTCCTaGGGGTTCTCTCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSMSMKS*GFSLSR
Trigger: TCTGGATAGAGAGAACCCTCAGGACTTCATAGACAT...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTGAAGGTACATGTCTATaGAGTCCTGAGGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFEGTCL*SPEGSL
Trigger: GAGAGAACCCTCAGGACTTCATAGACATGTACCTTC...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAACACACAACTCCAGCATaGGGCCAAGGGGTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKHTTPA*GQGVAC
Trigger: ACAGGCTACCCCTTGGCCTCATGCTGGAGTTGTGTG...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTTATTCAAGGATCAGATaGATTGGGCCTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAYSRIR*IGPGGR
Trigger: CCTGCCACCAGGCCCAATGCATCTGATCCTTGAATA...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCACAATTGCCCTGGAATaGCATTCCCAGACTGAGATC +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSTIALE*HSQTEI
Trigger: GATCTCAGTCTGGGAATGGCATTCCAGGGCAATTGT...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCAAGCCCAAAGAAGCTaGCATAGAATCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFQAQRS*HRICAE
Trigger: CTCAGCACAGATTCTATGCCAGCTTCTTTGGGCTTG...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTGTACATGGAGCACTGTaGGAGAATAAAAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTVHGAL*ENKRKG
Trigger: CCCCTTTCTTTTATTCTCCCACAGTGCTCCATGTAC...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCGAGGTTAGGGAGATCTaGTGTCTCCATTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSEVREI*CLHLSG
Trigger: TCCAGATAAATGGAGACACCAGATCTCCCTAACCTC...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTGCCAAGGGCATATGTTaGCCAGGAGGACTTGACTGT +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVAKGIC*PGGLDC
Trigger: ACAGTCAAGTCCTCCTGGTCAACATATGCCCTTGGC...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTATGTCTATGAAGTCCTaGGGGTTCTCTCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPMSMKS*GFSLSR
Trigger: TCTGGATAGAGAGAACCCTCAGGACTTCATAGACAT...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTCTCGGTTGGCGCCAATaGCTCTTTCAATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPLGWRQ*LFQFLH
Trigger: ATGAAGAAATTGAAAGAGTCATTGGCGCCAACCGAG...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAGCCTCTGCACTTCCATaGTGGTGGCTTCTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKASALP*WWLLCR
Trigger: CCTACACAGAAGCCACCATCATGGAAGTGCAGAGGC...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTGCTGAAGTATCCTGCTaGGGAATCCTCCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAAEVSC*GILQDE
Trigger: TTCATCTTGGAGGATTCCTCAGCAGGATACTTCAGC...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGGCTGAAGTATCCTGCTaGGGAATCCTCCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: KESEFFESIFKDQMHWAWAEVSC*GILQDE
Trigger: TTCATCTTGGAGGATTCCTCAGCAGGATACTTCAGC...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATGGTTACCACCCCTGCTaGAAACTGCTTTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYGYHPC*KLLFQR
Trigger: CCTCTGGAAAAGCAGTTTTCAGCAGGGGTGGTAACC...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTGAAATCCTGGCATCTTaGGCAGGACAATTCTTCACT +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICEILAS*AGQFFT
Trigger: AGTGAAGAATTGTCCTGCTCAAGATGCCAGGATTTC...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCATGTGGTTGCTCATATaGCTGCTATGCTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSMWLLI*LLCLLL
Trigger: CAGAAGTAAGCATAGCAGTCATATGAGCAACCACAT...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTCAGAGCAAAGAAGGGTaGTCAGTTATAGAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICQSKEG*SVIEGQ
Trigger: TTGGCCTTCTATAACTGATCACCCTTCTTTGCTCTG...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTCTCTCCTCTTCCATGTaGAGAAGGTACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPLSSSM*RRYMSM
Trigger: CATAGACATGTACCTTCTCCACATGGAAGAGGAGAG...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATAGGTCATATGAGGAATaGCAAGCGGCACCACCACAG +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYRSYEE*QAAPPQ
Trigger: CTGTGGTGGTGCCGCTTGCCATTCCTCATATGACCT...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGTACTGACCACAGGTTaGGTAAGATCAATGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPVLTTG*VRSMCL
Trigger: AAGGCACATTGATCTTACCCAACCTGTGGTCAGTAC...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGAGATTGGCCCATCGGTaGAAGCCACTGCAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: KESEFFESIFKDQMHWAWRLAHR*KPLQVK
Trigger: TTTTACTTGCAGTGGCTTCCACCGATGGGCCAATCT...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTCAAGCCCAAAGAAGCTaGCATAGAATCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAQAQRS*HRICAE
Trigger: CTCAGCACAGATTCTATGCCAGCTTCTTTGGGCTTG...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCCTAGTCTCCAGGTGGTaGGAGTTTACATTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSLVSRW*EFTFCY
Trigger: GTAACAGAATGTAAACTCCCACCACCTGGAGACTAG...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAGGTTACCACCCCTGCTaGAAACTGCTTTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKGYHPC*KLLFQR
Trigger: CCTCTGGAAAAGCAGTTTTCAGCAGGGGTGGTAACC...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTATGCCATTCCCAGACTaGGATCTAACTACACAGAGT +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAMPFPD*DLTTQS
Trigger: ACTCTGTGTAGTTAGATCTCAGTCTGGGAATGGCAT...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGGCAAATGCGAAACTCTaGATTAGGCTCACAAACATT +
Preference number: 4 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVANAKL*IRLTNI
Trigger: AATGTTTGTGAGCCTAATGCAGAGTTTCGCATTTGC...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTGGATTCACTGTCCTTTaGAGTAGGAAGAATCTGCTT +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICGFTVL*SRKNLL
Trigger: AAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCCCCAAATCACAGACCTaGATTACTAAAATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSPKSQT*ITKMAE
Trigger: TTCAGCCATTTTAGTAATGCAGGTCTGTGATTTGGG...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTTATGAACAGCGTAGCTaGTTCTCTCCTTTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPYEQRS*FSPLGK
Trigger: CTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATA...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCTGCATTACTAAAATaGCTGAAGTATCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFPALLK*LKYPAE
Trigger: CTCAGCAGGATACTTCAGCCATTTTAGTAATGCAGG...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTCCTGCATTACTAAAATaGCTGAAGTATCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICPALLK*LKYPAE
Trigger: CTCAGCAGGATACTTCAGCCATTTTAGTAATGCAGG...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTTGTTATGGGATCAAGTaGTGGCAGAATCAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFCYGIK*WQNQEV
Trigger: CACTTCTTGATTCTGCCACCACTTGATCCCATAACA...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTATCAAGAAGTGGTTCTaGAAGTGTTCTTTAGTCACA +
Preference number: 4 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTIKKWF*KCSLVT
Trigger: TGTGACTAAAGAACACTTTCAGAACCACTTCTTGAT...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAATTAGGAAAGTCAGTGTaGGGTCCCTGGATATGGCCT +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKLGKSV*GPWIWP
Trigger: AGGCCATATCCAGGGACCTCACACTGACTTTCCTAA...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR TCA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTCTGTGGCCAAGAAGGTaGGTTTATGTAAAGATATGG +
Preference number: 4 (lower is better)
Translates to: NKKIVTEQAQRSWHRICALWPRR*VYVKIW
Trigger: CCATATCTTTACATAAACTCACCTTCTTGGCCACAG...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCTCTTCTCCGTGCTTTTaGATTTCTGCTTTCACATAT +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSSSPCF*ISAFTY
Trigger: ATATGTGAAAGCAGAAATGCAAAAGCACGGAGAAGA...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTGCAAATGCGAAACTCTaGATTAGGCTCACAAACATT +
Preference number: 4 (lower is better)
Translates to: KASSTPIIMITKNHTHTFANAKL*IRLTNI
Trigger: AATGTTTGTGAGCCTAATGCAGAGTTTCGCATTTGC...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTGGAATGGTATACCCTTaGAGCACTGTGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVGMVYP*STVFSE
Trigger: CTCAGAGAACACAGTGCTCCAAGGGTATACCATTCC...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTTTTACCATCTCTTCTTaGAGATGCTCTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPFTISS*RCSSSP
Trigger: AGGAGATGAAGAGCATCTCCAAGAAGAGATGGTAAA...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTAAAATGACGAAGAGTTaGATGAGAGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPKMTKS*MRELPL
Trigger: CAAAGGAAGTTCTCTCATTCAACTCTTCGTCATTTT...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTTTGACCAGGAGGACTTaGCTGTTCAGACAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVLTRRT*LFRQIS
Trigger: AGAAATCTGTCTGAACAGTCAAGTCCTCCTGGTCAA...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCCTATCCAGAGACTCTTaGTGGTCTTTGATGATTTTT +
Preference number: 4 (lower is better)
Translates to: STPIIMITKNHTHTFPNSLSRDS*WSLMIF
Trigger: AAAAATCATCAAAGACCATCAAGAGTCTCTGGATAG...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTCTCGGTTGGCGCCAATaGCTCTTTCAATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVLGWRQ*LFQFLH
Trigger: ATGAAGAAATTGAAAGAGTCATTGGCGCCAACCGAG...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTCAAAGCATTCCAGGCTaGACACCACTTTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVQSIPG*TPLSCC
Trigger: ACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTG...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCAGTAGAAAGGAATTCTaGCAAGAAGCTACTAAAGAA +
Preference number: 4 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSSRKEF*QEATKE
Trigger: TTCTTTAGTAGCTTCTTGGCAGAATTCCTTTCTACT...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATGACGGGACCATAATGTaGAAACACAACCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYDGTIM*KHNPYH
Trigger: GTGATAAGGGTTGTGTTTGCACATTATGGTCCCGTC...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR CCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATCTCTCCTCTTCCATGTaGAGAAGGTACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYLSSSM*RRYMSM
Trigger: CATAGACATGTACCTTCTCCACATGGAAGAGGAGAG...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAGGAATGGTATACCCTTaGAGCACTGTGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKGMVYP*STVFSE
Trigger: CTCAGAGAACACAGTGCTCCAAGGGTATACCATTCC...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATGTACTGACCACAGGTTaGGTAAGATCAATGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYVLTTG*VRSMCL
Trigger: AAGGCACATTGATCTTACCCAACCTGTGGTCAGTAC...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAGATCCACTGAGTTGCTaGATTCACTGTCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKDPLSC*IHCPLQ
Trigger: CTGCAAAGGACAGTGAATCCAGCAACTCAGTGGATC...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAAGATTGGCCCATCGGTaGAAGCCACTGCAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKRLAHR*KPLQVK
Trigger: TTTTACTTGCAGTGGCTTCCACCGATGGGCCAATCT...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTAATAAAAGAAAGGGGTaGTCATTCCTTAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPNKRKG*SFLRAC
Trigger: ACATGCTCTAAGGAATGACCACCCCTTTCTTTTATT...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTCATTCACAAGACAACTaGGCATCCACTAAGACCAAG +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVHSQDN*ASTKTK
Trigger: CTTGGTCTTAGTGGATGCCCAGTTGTCTTGTGAATG...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR GCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTCCCAAATCACAGACCTaGATTACTAAAATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVPKSQT*ITKMAE
Trigger: TTCAGCCATTTTAGTAATGCAGGTCTGTGATTTGGG...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CCA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTTTTACCATCTCTTCTTaGAGATGCTCTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVFTISS*RCSSSP
Trigger: AGGAGATGAAGAGCATCTCCAAGAAGAGATGGTAAA...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAAAAATGACGAAGAGTTaGATGAGAGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKKMTKS*MRELPL
Trigger: CAAAGGAAGTTCTCTCATTCAACTCTTCGTCATTTT...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
36% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR TCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAACTATCCAGAGACTCTTaGTGGTCTTTGATGATTTTT +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKLSRDS*WSLMIF
Trigger: AAAAATCATCAAAGACCATCAAGAGTCTCTGGATAG...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR GCA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAATCTTCTCCGTGCTTTTaGATTTCTGCTTTCACATAT +
Preference number: 4 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKSSPCF*ISAFTY
Trigger: ATATGTGAAAGCAGAAATGCAAAAGCACGGAGAAGA...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS GCA 90 bp AGCTCCGCCGCCGGAGGAAGGGAGGCAGCAGCACGTGACCGAAGTTaGCCACCAGAGGCCAGGGCGTGGGCCCGGGCGGGATGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: SSAAGGREAAARDRS*PPEARAWARAGCPA
Trigger: CGCGGGGCATCCCGCCCGGGCCCACGCCCTGGCCTCTGGTGGGCAACTTCGGTCACGTGCTGCTGCCTCCCTTCCTCCGGCGGCGGAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332884.11
ENST00000508453.1
ENST00000513302.1
CDS TCA 90 bp TGCCGTACACGCGGGCTAGGTGAGCCAGGAGCACCTGCGGGCCTATaGCCGAGGGATCAATCCCTGCGGCCCTGGTCCTGCTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CRTRGLGEPGAPAGL*PRDQSLRPWSCCSA
Trigger: GGCTGAGCAGCAGGACCAGGGCCGCAGGGATTGATCCCTCGGTCATAGGCCCGCAGGTGCTCCTGGCTCACCTAGCCCGCGTGTACGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332884.11
ENST00000508453.1
ENST00000513302.1
CDS GCA 90 bp TGGGAAGTCCAAGAGGATAGCACTGGCATCTGGCAAGGGCCTTCATaGCTTCTCCTTGGTCACGATGGAGATGAGCGGCACCCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: WEVQEDSTGIWQGPS*LLLGHDGDERHPRA
Trigger: CGCCCGCGGGTGCCGCTCATCTCCATCGTGACCAAGGAGAAGGCATGAAGGCCCTTGCCAGATGCCAGTGCTATCCTCTTGGACTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS TCA 90 bp TGGCCGATAAAGAAGCTGAAGATGCTGCCGTACACGCGGGCTAGGTaGGCCAGGAGCACCTGCGGGCCTATGACCGAGGGATCAATCCCT +
Preference number: 5 (lower is better)
Translates to: WPIKKLKMLPYTRAR*ARSTCGPMTEGSIP
Trigger: AGGGATTGATCCCTCGGTCATAGGCCCGCAGGTGCTCCTGGCTCACCTAGCCCGCGTGTACGGCAGCATCTTCAGCTTCTTTATCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332884.11
ENST00000508453.1
ENST00000513302.1
CDS CCA 90 bp GTGAGTTCTGAAGGCTGGGAAGTCCAAGAGGATAGCACTGGCATCTaGCAAGGGCCTTCATGCCTTCTCCTTGGTCACGATGGAGATGAG +
Preference number: 5 (lower is better)
Translates to: VSSEGWEVQEDSTGI*QGPSCLLLGHDGDE
Trigger: CTCATCTCCATCGTGACCAAGGAGAAGGCATGAAGGCCCTTGCCAGATGCCAGTGCTATCCTCTTGGACTTCCCAGCCTTCAGAACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR CAA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTCAAGGATCAGATGCATaGGGCCTGGTGGCAGGGACG +
Preference number: 5 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGQGSDA*GLVAGT
Trigger: CGTCCCTGCCACCAGGCCCAATGCATCTGATCCTTG...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS CCA 90 bp AAGAAGCAGGTATTCTTGTCCAAGGAACAGGTGAGTTCTGAAGGCTaGGAAGTCCAAGAGGATAGCACTGGCATCTGGCAAGGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: KKQVFLSKEQVSSEG*EVQEDSTGIWQGPS
Trigger: TGAAGGCCCTTGCCAGATGCCAGTGCTATCCTCTTGGACTTCCCAGCCTTCAGAACTCACCTGTTCCTTGGACAAGAATACCTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR CAA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAGGCCTCGGGTTCCCCTaGCTGCCTGGAGGAGACGCG +
Preference number: 5 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKGLGFP*LPGGDA
Trigger: CGCGTCTCCTCCAGGCAGCAAGGGGAACCCGAGGCC...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CAA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCCAAGGATCAGATGCATaGGGCCTGGTGGCAGGGACG +
Preference number: 5 (lower is better)
Translates to: STPIIMITKNHTHTFPNSQGSDA*GLVAGT
Trigger: CGTCCCTGCCACCAGGCCCAATGCATCTGATCCTTG...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp CAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCACTAGGGAAGGAGCTCGGTaGGCGCCAATGACTCTTTCA +
Preference number: 5 (lower is better)
Translates to: QECGCSYDCYAYFCTWSTREGAR*APMTLS
Trigger: TGAAAGAGTCATTGGCGCCAACCGAGCTCCTTCCCT...AGTGCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CAA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTACCTCTGAGCCCAGCTaGGATCCACTGAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICTSEPS*DPLSCW
Trigger: CCAGCAACTCAGTGGATCCAAGCTGGGCTCAGAGGT...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTACCTCTGAGCCCAGCTaGGATCCACTGAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: KASSTPIIMITKNHTHTFTSEPS*DPLSCW
Trigger: CCAGCAACTCAGTGGATCCAAGCTGGGCTCAGAGGT...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS TCA 90 bp AAGGAATTCCTCAGAAGAAGCAGGTATTCTTGTCCAAGGAACAGGTaGGTTCTGAAGGCTGGGAAGTCCAAGAGGATAGCACTGGCATCT +
Preference number: 5 (lower is better)
Translates to: KEFLRRSRYSCPRNR*VLKAGKSKRIALAS
Trigger: AGATGCCAGTGCTATCCTCTTGGACTTCCCAGCCTTCAGAACTCACCTGTTCCTTGGACAAGAATACCTGCTTCTTCTGAGGAATTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS-3UTR CAA 90 bp CTTCTCTATCAGTATGAACAGCGTAGCTGCTTCTCTCCTTTAGGAAAGTCAGTGGCCTCATGTTCACAATaGCCCTGGAATGCCATTCCC +
Preference number: 5 (lower is better)
Translates to: LLYQYEQRSCFSPLGKSVASCSQ*PWNAIP
Trigger: GGGAATGGCATTCCAGGGCAATTGTGAACATGAGGC...CACTGACTTTCCTAAAGGAGAGAAGCAGCTACGCTGTTCATACTGATAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS CCA 90 bp CAGTATCACATTTACTCCTTTGCTACTGGGCACAGTAGCCAAAGATaGTTTGAGCTGTCCTCAAGTCTTGCTGAGCTGAGCATCTTGACT +
Preference number: 5 (lower is better)
Translates to: QYHIYSFATGHSSQR*FELSSSLAELSILT
Trigger: AGTCAAGATGCTCAGCTCAGCAAGACTTGAGGACAGCTCAAACCATCTTTGGCTACTGTGCCCAGTAGCAAAGGAGTAAATGTGATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS-3UTR CAA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTATGTTAGAGACGGCATaGCTGATGATGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGMLETA*LMMEKG
Trigger: CCCTTTCTCCATCATCAGCAATGCCGTCTCTAACAT...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTAGGGAAGGAGCTCGGTaGGCGCCAATGACTCTTTCA +
Preference number: 5 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAREGAR*APMTLS
Trigger: TGAAAGAGTCATTGGCGCCAACCGAGCTCCTTCCCT...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCCTTCATGCCTTCTCCTaGGTCACGATGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: STPIIMITKNHTHTFPNSLHAFS*VTMEMS
Trigger: GCTCATCTCCATCGTGACCAAGGAGAAGGCATGAAG...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS TCA 90 bp CTTGGGCTCCAAGCTAAGTTTTCCCAACCCAAAATGACGAAGAGTTaGATGAGAGAACTTCCTTTGTTGTCTCCAGACGGGACCATAATG +
Preference number: 5 (lower is better)
Translates to: LGLQAKFSQPKMTKS*MRELPLLSPDGTIM
Trigger: CATTATGGTCCCGTCTGGAGACAACAAAGGAAGTTCTCTCATTCAACTCTTCGTCATTTTGGGTTGGGAAAACTTAGCTTGGAGCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS GCA 90 bp GATGGAGAAAGGGCAGAAGGGGTCTTCTCCGTGCTTTTGCATTTCTaGTTTCACATATTTGAACTCCTCAATAATCTTGGGCTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: DGERAEGVFSVLLHF*FHIFELLNNLGLQA
Trigger: AGCTTGGAGCCCAAGATTATTGAGGAGTTCAAATATGTGAAAGCAGAAATGCAAAAGCACGGAGAAGACCCCTTCTGCCCTTTCTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGATGAGAGAACTTCCTTaGTTGTCTCCAGACGGGACC +
Preference number: 5 (lower is better)
Translates to: KESEFFESIFKDQMHWAWMRELP*LSPDGT
Trigger: GGTCCCGTCTGGAGACAACAAAGGAAGTTCTCTCAT...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp CCCATCTCTGACAAAGCATTCCAGGCTGAACACCACTTTCATGTTGTCATAGGTGTCTTCTCCGTGCTTTaGCATTTCTGCTTTCACATA +
Preference number: 5 (lower is better)
Translates to: PISDKAFQAEHHFHVVIGVFSVL*HFCFHI
Trigger: TATGTGAAAGCAGAAATGCAAAAGCACGGAGAAGAC...ACCTATGACAACATGAAAGTGGTGTTCAGCCTGGAATGCTTTGTCAGAGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCATGTTAGAGACGGCATaGCTGATGATGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: STPIIMITKNHTHTFPNSMLETA*LMMEKG
Trigger: CCCTTTCTCCATCATCAGCAATGCCGTCTCTAACAT...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTTGTACTGACCACAGGTaGGGTAAGATCAATGTGCCT +
Preference number: 5 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICCTDHR*GKINVP
Trigger: AGGCACATTGATCTTACCCAACCTGTGGTCAGTACA...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTTTCCATCTTTGCCAGTaGTTCTCCCATACACACCCG +
Preference number: 5 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAFHLCQ*FSHTHP
Trigger: CGGGTGTGTATGGGAGAACAACTGGCAAAGATGGAA...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTCTTGGATCCACTGAGTaGCTGGATTCACTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPLGSTE*LDSLSF
Trigger: AAAGGACAGTGAATCCAGCAACTCAGTGGATCCAAG...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAACAACCCCCTTCTCCTaGGTCACGATGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKTTPFS*VTMEMS
Trigger: GCTCATCTCCATCGTGACCAAGGAGAAGGGGGTTGT...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CAA 90 bp AACAAAAAGATAGTGACAGAACAAGCCCAAAGAAGCTGGCATAGAATCTGTGCTGTTGACCAGGAGGACTaGACTGTTCAGACAGATTTC +
Preference number: 5 (lower is better)
Translates to: NKKIVTEQAQRSWHRICAVDQED*TVQTDF
Trigger: GAAATCTGTCTGAACAGTCAAGTCCTCCTGGTCAAC...AGCACAGATTCTATGCCAGCTTCTTTGGGCTTGTTCTGTCACTATCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTTTCATGAACCTTTTCTaGTACATCGGGGTTCAGCGA +
Preference number: 5 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICFMNLF*YIGVQR
Trigger: TCGCTGAACCCCGATGTACAAGAAAAGGTTCATGAA...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AAGGCCAGTAGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTTTCATGAACCTTTTCTaGTACATCGGGGTTCAGCGA +
Preference number: 5 (lower is better)
Translates to: KASSTPIIMITKNHTHTFFMNLF*YIGVQR
Trigger: TCGCTGAACCCCGATGTACAAGAAAAGGTTCATGAA...AAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCTACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGGGAAATCCTGGCATCTaGAGCAGGACAATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: KESEFFESIFKDQMHWAWGNPGI*SRTILH
Trigger: GTGAAGAATTGTCCTGCTCAAGATGCCAGGATTTCC...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTGTCTTCTCCGTGCTTTaGCATTTCTGCTTTCACATA +
Preference number: 5 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICVFSVL*HFCFHI
Trigger: TATGTGAAAGCAGAAATGCAAAAGCACGGAGAAGAC...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATTTCCATCTTTGCCAGTaGTTCTCCCATACACACCCG +
Preference number: 5 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYFHLCQ*FSHTHP
Trigger: CGGGTGTGTATGGGAGAACAACTGGCAAAGATGGAA...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GTTCAGGAATGTGGTTGCTCATATGACTGCTATGCTTACTTCTGTACATGGAGCCGTTTCATAGGTACTTaGTTTTCTATCCCCCAAATC +
Preference number: 5 (lower is better)
Translates to: VQECGCSYDCYAYFCTWSRFIGT*FSIPQI
Trigger: GATTTGGGGGATAGAAAACAAAGTACCTATGAAACG...GCTCCATGTACAGAAGTAAGCATAGCAGTCATATGAGCAACCACATTCCTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CAA 90 bp CCAGATATCCCGTTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTACTCTGGATCTTTTCTaGCCCTCTTCTCTATCAGTA +
Preference number: 5 (lower is better)
Translates to: PDIPFHRYFVFYPPNHRPTLDLF*PSSLSV
Trigger: TACTGATAGAGAAGAGGGCAAGAAAAGATCCAGAGT...AGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAACGGGATATCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS-3UTR CAA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATAGAGAACTTCCTTTGTaGTCTCCAGACGGGACCATA +
Preference number: 5 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYRELPL*SPDGTI
Trigger: TATGGTCCCGTCTGGAGACAACAAAGGAAGTTCTCT...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATTGTACTGACCACAGGTaGGGTAAGATCAATGTGCCT +
Preference number: 5 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYCTDHR*GKINVP
Trigger: AGGCACATTGATCTTACCCAACCTGTGGTCAGTACA...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGGGAATAATTCCATCTTaGCCAGTTGTTCTCCCATAC +
Preference number: 5 (lower is better)
Translates to: KESEFFESIFKDQMHWAWGIIPS*PVVLPY
Trigger: GTATGGGAGAACAACTGGCAAAGATGGAATTATTCC...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GTTGCTGGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTAAAGATGTAAGGCATTaGACCATCATTAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VAGFTVLCSRKNLLRRICKDVRH*TIISAE
Trigger: CTCAGCACTAATGATGGTCAAATGCCTTACATCTTT...ACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCCAGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAAGAGAACTTCCTTTGTaGTCTCCAGACGGGACCATA +
Preference number: 5 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKRELPL*SPDGTI
Trigger: TATGGTCCCGTCTGGAGACAACAAAGGAAGTTCTCT...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AGCACCCCCATCATTATGATAACCAAGAATCATACCCACACATTTCCAAACTCCTCTATCCAGAGACTCTaGATGGTCTTTGATGATTTT +
Preference number: 5 (lower is better)
Translates to: STPIIMITKNHTHTFPNSSIQRL*MVFDDF
Trigger: AAAATCATCAAAGACCATCAAGAGTCTCTGGATAGA...GGAGTTTGGAAATGTGTGGGTATGATTCTTGGTTATCATAATGATGGGGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAACTTGGATCCACTGAGTaGCTGGATTCACTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKLGSTE*LDSLSF
Trigger: AAAGGACAGTGAATCCAGCAACTCAGTGGATCCAAG...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGCGTTTCATAGGTACTTaGTTTTCTATCCCCCAAATC +
Preference number: 5 (lower is better)
Translates to: KESEFFESIFKDQMHWAWRFIGT*FSIPQI
Trigger: GATTTGGGGGATAGAAAACAAAGTACCTATGAAACG...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp AAAGAGAGTGAATTCTTTGAGAGTATATTCAAGGATCAGATGCATTGGGCCTGGTCTATCCAGAGACTCTaGATGGTCTTTGATGATTTT +
Preference number: 5 (lower is better)
Translates to: KESEFFESIFKDQMHWAWSIQRL*MVFDDF
Trigger: AAAATCATCAAAGACCATCAAGAGTCTCTGGATAGA...CCAGGCCCAATGCATCTGATCCTTGAATATACTCTCAAAGAATTCACTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp CTGCTGAAAACTGCTTTTCCAGAGGGACCATCTACATTTAGAAACAATTTAGTTGGAATAATTCCATCTTaGCCAGTTGTTCTCCCATAC +
Preference number: 5 (lower is better)
Translates to: LLKTAFPEGPSTFRNNLVGIIPS*PVVLPY
Trigger: GTATGGGAGAACAACTGGCAAAGATGGAATTATTCC...AACTAAATTGTTTCTAAATGTAGATGGTCCCTCTGGAAAAGCAGTTTTCAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp GGATTCACTGTCCTTTGCAGTAGGAAGAATCTGCTTAGAAGGATATGTATTTATAACTCCTCAATAATCTaGGGCTCCAAGCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: GFTVLCSRKNLLRRICIYNSSII*GSKLSF
Trigger: AAAACTTAGCTTGGAGCCCAAGATTATTGAGGAGTT...ATAAATACATATCCTTCTAAGCAGATTCTTCCTACTGCAAAGGACAGTGAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS GCA 90 bp AACTTTTCAGCAAATGTATTAAGTCAACTATTTCTAGCCTCTCTTTaGGTTATGAAACATACCCTTCTCTGCTATTCTCACCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: NFSANVLSQLFLASL*VMKHTLLCYSHQLQ
Trigger: CTGAAGTTGGTGAGAATAGCAGAGAAGGGTATGTTTCATAACGCAAAGAGAGGCTAGAAATAGTTGACTTAATACATTTGCTGAAAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS-3UTR CAA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAAACTCCTCAATAATCTaGGGCTCCAAGCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKNSSII*GSKLSF
Trigger: AAAACTTAGCTTGGAGCCCAAGATTATTGAGGAGTT...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS-3UTR CAA 90 bp TTTCATAGGTACTTTGTTTTCTATCCCCCAAATCACAGACCTGCATTACTAAAAAAAGATGTAAGGCATTaGACCATCATTAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: FHRYFVFYPPNHRPALLKKDVRH*TIISAE
Trigger: CTCAGCACTAATGATGGTCAAATGCCTTACATCTTT...TTTTAGTAATGCAGGTCTGTGATTTGGGGGATAGAAAACAAAGTACCTATGAAA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS GCA 72 bp GCCGGAGGAAGGGAGGCAGCAGCACGTGACCGAAGTTaGCCACCAGAGGCCAGGGCGTGGGCCCGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: AGGREAAARDRS*PPEARAWARAG
Trigger: TCCCGCCCGGGCCCACGCCCTGGCCTCTGGTGGGCAACTTCGGTCACGTGCTGCTGCCTCCCTTCCTCCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332884.11
ENST00000508453.1
ENST00000513302.1
CDS TCA 72 bp AAGAAGCTGAAGATGCTGCCGTACACGCGGGCTAGGTaGGCCAGGAGCACCTGCGGGCCTATGACCGAGGGA +
Preference number: 6 (lower is better)
Translates to: KKLKMLPYTRAR*ARSTCGPMTEG
Trigger: TCCCTCGGTCATAGGCCCGCAGGTGCTCCTGGCTCACCTAGCCCGCGTGTACGGCAGCATCTTCAGCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332884.11
ENST00000508453.1
ENST00000513302.1
CDS TCA 72 bp CAAGCGGCACCACCACAGTTAGCCTCTGCACTTCCATaGTGGTGGCTTCTGTGTAGGGCATCTGGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: QAAPPQLASALP*WWLLCRASGPC
Trigger: ACAAGGCCCAGATGCCCTACACAGAAGCCACCATCATGGAAGTGCAGAGGCTAACTGTGGTGGTGCCGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS CCA 72 bp GAAGGCTGGGAAGTCCAAGAGGATAGCACTGGCATCTaGCAAGGGCCTTCATGCTGCATCATCCCATGGTGG +
Preference number: 6 (lower is better)
Translates to: EGWEVQEDSTGI*QGPSCCIIPWW
Trigger: CCACCATGGGATGATGCAGCATGAAGGCCCTTGCCAGATGCCAGTGCTATCCTCTTGGACTTCCCAGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS CCA 72 bp GAAGGCTGGGAAGTCCAAGAGGATAGCACTGGCATCTaGCAAGGGCCTTCATGCCTTCTCCTTGGTCACGAT +
Preference number: 6 (lower is better)
Translates to: EGWEVQEDSTGI*QGPSCLLLGHD
Trigger: ATCGTGACCAAGGAGAAGGCATGAAGGCCCTTGCCAGATGCCAGTGCTATCCTCTTGGACTTCCCAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS TCA 72 bp GTATACCCTTGGAGCACTGTGTTCTCTGAGGTCATATaGGGAATGGCAAGCGGCACCACCACAGTTAGCCTC +
Preference number: 6 (lower is better)
Translates to: VYPWSTVFSEVI*GMASGTTTVSL
Trigger: GAGGCTAACTGTGGTGGTGCCGCTTGCCATTCCTCATATGACCTCAGAGAACACAGTGCTCCAAGGGTATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS CCA 72 bp CTTGGAGCACTGTGTTCTCTGAGGTCATATGAGGAATaGCAAGCGGCACCACCACAGTTAGCCTCTGCACTT +
Preference number: 6 (lower is better)
Translates to: LGALCSLRSYEE*QAAPPQLASAL
Trigger: AAGTGCAGAGGCTAACTGTGGTGGTGCCGCTTGCCATTCCTCATATGACCTCAGAGAACACAGTGCTCCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS CAA 90 bp AAGCGCTGGCCAAAGCACAAGGAGCAAATGATGTTAGAGACGGCATaGCTGATGATGGAGAAAGGGCAGAAGGGGTCTTCTCCGTGCTTT +
Preference number: 6 (lower is better)
Translates to: KRWPKHKEQMMLETA*LMMEKGQKGSSPCF
Trigger: AAAGCACGGAGAAGACCCCTTCTGCCCTTTCTCCATCATCAGCAATGCCGTCTCTAACATCATTTGCTCCTTGTGCTTTGGCCAGCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS GCA 72 bp GAACTTCCTTTGTTGTCTCCAGACGGGACCATAATGTaGAAACACAACCCCCTTCTCCTTGGTCACGATGGA +
Preference number: 6 (lower is better)
Translates to: ELPLLSPDGTIM*KHNPLLLGHDG
Trigger: TCCATCGTGACCAAGGAGAAGGGGGTTGTGTTTGCACATTATGGTCCCGTCTGGAGACAACAAAGGAAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332884.11
CDS CAA 90 bp TCCGGTTTCTCCCAAATGGCTGGGTCTCTATGTACTGACCACAGGTaGGGTAAGATCAATGTGCCTTTAGGAATGGTATACCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: SGFSQMAGSLCTDHR*GKINVPLGMVYPWS
Trigger: GCTCCAAGGGTATACCATTCCTAAAGGCACATTGATCTTACCCAACCTGTGGTCAGTACATAGAGACCCAGCCATTTGGGAGAAACCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS CCA 72 bp ATTTACTCCTTTGCTACTGGGCACAGTAGCCAAAGATaGTTTGAGCTGTCCTCAAGTCTTGCTGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: IYSFATGHSSQR*FELSSSLAELS
Trigger: GCTCAGCTCAGCAAGACTTGAGGACAGCTCAAACCATCTTTGGCTACTGTGCCCAGTAGCAAAGGAGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS CAA 72 bp TTTGAGCTGTCCTCAAGTCTTGCTGAGCTGAGCATCTaGACTGTAGTCACAGTGGCCTCTTTTCTTCAGGCT +
Preference number: 6 (lower is better)
Translates to: FELSSSLAELSI*TVVTVASFLQA
Trigger: AGCCTGAAGAAAAGAGGCCACTGTGACTACAGTCAAGATGCTCAGCTCAGCAAGACTTGAGGACAGCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS GCA 72 bp GAACTTCCTTTGTTGTCTCCAGACGGGACCATAATGTaGAAACACAACCCTTATCACTGTGGCCAAGAAGGT +
Preference number: 6 (lower is better)
Translates to: ELPLLSPDGTIM*KHNPYHCGQEG
Trigger: ACCTTCTTGGCCACAGTGATAAGGGTTGTGTTTGCACATTATGGTCCCGTCTGGAGACAACAAAGGAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS CAA 90 bp TATGGCCTACACATCTTGTTTCTGGACAGTATCACATTTACTCCTTaGCTACTGGGCACAGTAGCCAAAGATGGTTTGAGCTGTCCTCAA +
Preference number: 6 (lower is better)
Translates to: YGLHILFLDSITFTP*LLGTVAKDGLSCPQ
Trigger: TTGAGGACAGCTCAAACCATCTTTGGCTACTGTGCCCAGTAGCAAAGGAGTAAATGTGATACTGTCCAGAAACAAGATGTGTAGGCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS TCA 72 bp CAAGCTAAGTTTTCCCAACCCAAAATGACGAAGAGTTaGATGAGAGAACTTCCTTTGTTGTCTCCAGACGGG +
Preference number: 6 (lower is better)
Translates to: QAKFSQPKMTKS*MRELPLLSPDG
Trigger: CCCGTCTGGAGACAACAAAGGAAGTTCTCTCATTCAACTCTTCGTCATTTTGGGTTGGGAAAACTTAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS TCA 72 bp GTCCAAAGGGAAGGTAATAAAGCCAAGGGCATATGTTaGCCAGGAGGACTTGACTGTTCAGACAGATTTCTA +
Preference number: 6 (lower is better)
Translates to: VQREGNKAKGIC*PGGLDCSDRFL
Trigger: TAGAAATCTGTCTGAACAGTCAAGTCCTCCTGGTCAACATATGCCCTTGGCTTTATTACCTTCCCTTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332884.11
ENST00000508453.1
CDS TCA 72 bp GTGCAAACACAACCCTTATCACTGTGGCCAAGAAGGTaGGTTTATGTAAAGATATGGCATCTGCCGTTCAAC +
Preference number: 6 (lower is better)
Translates to: VQTQPLSLWPRR*VYVKIWHLPFN
Trigger: GTTGAACGGCAGATGCCATATCTTTACATAAACTCACCTTCTTGGCCACAGTGATAAGGGTTGTGTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508453.1
CDS CAA 72 bp CACATCTTGTTTCTGGACAGTATCACATTTACTCCTTaGCTACTGGGCACAGTAGCCAAAGATGGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: HILFLDSITFTP*LLGTVAKDGLS
Trigger: GCTCAAACCATCTTTGGCTACTGTGCCCAGTAGCAAAGGAGTAAATGTGATACTGTCCAGAAACAAGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS TCA 72 bp AACAGCACTAATCCATTGATGAAGGCAGAGCCCTCATaGCCTAGTCATCTTTTAAGTTCCCATCTCTTGACA +
Preference number: 6 (lower is better)
Translates to: NSTNPLMKAEPS*PSHLLSSHLLT
Trigger: TGTCAAGAGATGGGAACTTAAAAGATGACTAGGTCATGAGGGCTCTGCCTTCATCAATGGATTAGTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS GCA 72 bp CTAGCCTCTCTTTGCGTTATGAAACATACCCTTCTCTaGTATTCTCACCAACTTCAGCAGCAAAGTTCTTTC +
Preference number: 6 (lower is better)
Translates to: LASLCVMKHTLL*YSHQLQQQSSF
Trigger: GAAAGAACTTTGCTGCTGAAGTTGGTGAGAATAGCAGAGAAGGGTATGTTTCATAACGCAAAGAGAGGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS CCA 72 bp AATTTCTTTTCTCTTATGGCCTACACATCTTGTTTCTaGACAGTATCACATTTACTCCTTTGCTACTGGGCA +
Preference number: 6 (lower is better)
Translates to: NFFSLMAYTSCF*TVSHLLLCYWA
Trigger: TGCCCAGTAGCAAAGGAGTAAATGTGATACTGTCCAGAAACAAGATGTGTAGGCCATAAGAGAAAAGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513302.1
CDS CAA 90 bp GAACTTTTCAGCAAATGTATTAAGTCAACTATTTCTAGCCTCTCTTaGCGTTATGAAACATACCCTTCTCTGCTATTCTCACCAACTTCA +
Preference number: 6 (lower is better)
Translates to: ELFSKCIKSTISSLS*RYETYPSLLFSPTS
Trigger: TGAAGTTGGTGAGAATAGCAGAGAAGGGTATGTTTCATAACGCAAAGAGAGGCTAGAAATAGTTGACTTAATACATTTGCTGAAAAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513302.1