RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP2E1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130649

Ensembl transcript IDs: ENST00000252945.8, ENST00000368520.1, ENST00000418356.1, ENST00000421586.5, ENST00000463117.6, ENST00000469258.1, ENST00000477500.5, ENST00000480558.1, ENST00000541080.5, ENST00000541261.1

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CATCTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTGTCGGTCCCGGGGACAGTTaGGGTCCAGAGATTGATGGT +
Preference number: 2 (lower is better)
Translates to: HLLPILDGRDSAWPNHPVGPGDS*GPEIDG
Trigger: ACCATCAATCTCTGGACCCCAACTGTCCCCGGGACC...GACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR TCA 90 bp AACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTCGAGCAGGCAGTCGGTaGGGTCCCGGGGACAGTTGG +
Preference number: 2 (lower is better)
Translates to: NFSGSGNSWLSYKTESRVRAGSR*GPGDSW
Trigger: CCAACTGTCCCCGGGACCTCACCGACTGCCTGCTCG...AACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CCA 90 bp CTTTCCATTTTCATTCAGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAAAAGTGGGCCTCCCTCTaGATCCGGCTCTCATTGCCC +
Preference number: 2 (lower is better)
Translates to: LSIFIQEVFWLKLFWIRKKWASL*IRLSLP
Trigger: GGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTT...TTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAATGAAAATGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR TCA 90 bp TTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTGGCAAGCTTGGGTCTTCCTaGGTGCTTCCAGCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: FSGSGNSWLSYKTESRVGKLGSS*VLPAGS
Trigger: ACTTCCTGCTGGAAGCACTCAGGAAGACCCAAGCTT...GCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR CAA 90 bp AGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTaGTCATACAAAACAGAGTCCAGAGTTGGCACTACGACTGTGCCC +
Preference number: 2 (lower is better)
Translates to: RKCSGLNFSGSGNSW*SYKTESRVGTTTVP
Trigger: GGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR GCA 90 bp TCCATTTTCATTCAGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGGTCTTCCTGAGTaGTTCCAGCAGGAAGTGGGC +
Preference number: 2 (lower is better)
Translates to: SIFIQEVFWLKLFWIRKFLGLPE*FQQEVG
Trigger: GCCCACTTCCTGCTGGAAGCACTCAGGAAGACCCAA...GAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAATGAAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR GCA 90 bp AACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTAATGGTGTCTCGGGTTaGTTCATGGGGCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: NFSGSGNSWLSYKTESRVNGVSG*FMGQVG
Trigger: TCCAACCTGCCCCATGAAGCAACCCGAGACACCATT...AACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CCA 90 bp TTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGGCAGGGATTCGGCTTaGCCCAATCACCCTGTCAAT +
Preference number: 2 (lower is better)
Translates to: LNFSGSGNSWLSYKTESRGRDSA*PNHPVN
Trigger: ATTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCC...TCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR TCA 90 bp TTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGATTGGGGTCCAGAGATTaGTGGTGCTCCTTCACCCTT +
Preference number: 2 (lower is better)
Translates to: LNFSGSGNSWLSYKTESRLGSRD*WCSFTL
Trigger: AAGGGTGAAGGAGCACCATCAATCTCTGGACCCCAA...TCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR CAA 90 bp ATTCAGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTaGGTTGTCATACAAAACAGAGTCCAGAGTTGGCACTACGACTGT +
Preference number: 2 (lower is better)
Translates to: IQEVFWLKLFWIRKF*VVIQNRVQSWHYDC
Trigger: ACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR GCA 72 bp GCAGGAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTaGCCTGTTTCCCCATCCCATAGTTCCGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: AGSGPPSGSGSH*PVSPSHSSGGW
Trigger: CCACCCTCCGGAACTATGGGATGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp GAGGTATCCTCTGAAAATGGTGTCTCGGGTTGCTTCATGGGGCAGGTTGGAGGGTGGCAGGGATTCGGCTaGGCCCAATCACCCTGTCAA +
Preference number: 3 (lower is better)
Translates to: EVSSENGVSGCFMGQVGGWQGFG*AQSPCQ
Trigger: TTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCCA...CCCTCCAACCTGCCCCATGAAGCAACCCGAGACACCATTTTCAGAGGATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR TCA 72 bp AGCTTCTCTTCTCCATTTCCACGAGCAGGCAGTCGGTaGGGTCCCGGGGACAGTTGGGGTCCAGAGATTGAT +
Preference number: 3 (lower is better)
Translates to: SFSSPFPRAGSR*GPGDSWGPEID
Trigger: ATCAATCTCTGGACCCCAACTGTCCCCGGGACCTCACCGACTGCCTGCTCGTGGAAATGGAGAAGAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR TCA 72 bp TCGGTGAGGTCCCGGGGACAGTTGGGGTCCAGAGATTaGTGGTGCTCCTTCACCCTTTCAGACACATACTCT +
Preference number: 3 (lower is better)
Translates to: SVRSRGQLGSRD*WCSFTLSDTYS
Trigger: AGAGTATGTGTCTGAAAGGGTGAAGGAGCACCATCAATCTCTGGACCCCAACTGTCCCCGGGACCTCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR TCA 72 bp CCACAGCATCCATGTAGGGCATCTCTTGCCTATCCTTaGTGGCAGGGATTCGGCTTGGCCCAATCACCCTGT +
Preference number: 3 (lower is better)
Translates to: PQHPCRASLAYP*WQGFGLAQSPC
Trigger: ACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATGCCCTACATGGATGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp TCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTGTCAATTTGGATCCGGCTCTCATaGCCCTGTTTCCCCATCCCA +
Preference number: 3 (lower is better)
Translates to: SCLSLMAGIRLGPITLSIWIRLS*PCFPIP
Trigger: TGGGATGGGGAAACAGGGCAATGAGAGCCGGATCCA...AATTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp CTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTGTCAATAGTAGTGTAGAAAGCTaGGGTCTTCCTGAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: LLPILDGRDSAWPNHPVNSSVES*GLPECF
Trigger: GAAGCACTCAGGAAGACCCAAGCTTTCTACACTACT...ATTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR CCA 72 bp CATCTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTaGCCCAATCACCCTGTCAATTTCTTCATGGAGCTT +
Preference number: 3 (lower is better)
Translates to: HLLPILDGRDSA*PNHPVNFFMEL
Trigger: AAGCTCCATGAAGAAATTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp TTTCCATTTTCATTCAGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATGCTTCATGGGGCAGGTaGGAGGGCACGAGGGTGATG +
Preference number: 3 (lower is better)
Translates to: FPFSFRKCSGLNFSGSGNASWGR*EGTRVM
Trigger: CATCACCCTCGTGCCCTCCAACCTGCCCCATGAAGC...ATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAATGAAAATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR CCA 72 bp AAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTaGCACTACGACTGTGCCCTTGGGGATGAGGTATCC +
Preference number: 3 (lower is better)
Translates to: KFLVVIQNRVQS*HYDCALGDEVS
Trigger: GGATACCTCATCCCCAAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp TTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTGGCAATCTCTTGCCTATCCTaGATGGCAGGGATTCGGCTT +
Preference number: 3 (lower is better)
Translates to: FLDQEILGCHTKQSPELAISCLS*MAGIRL
Trigger: AAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGAT...TGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp TTTCCATTTTCATTCAGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATGTTGGGGTCCAGAGATaGATGGTGCTCCTTCACCCT +
Preference number: 3 (lower is better)
Translates to: FPFSFRKCSGLNFSGSGNVGVQR*MVLLHP
Trigger: AGGGTGAAGGAGCACCATCAATCTCTGGACCCCAAC...ATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAATGAAAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp AACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTCATGTAGGGCATCTCTaGCCTATCCTTGATGGCAGG +
Preference number: 3 (lower is better)
Translates to: NFSGSGNSWLSYKTESRVHVGHL*PILDGR
Trigger: CCTGCCATCAAGGATAGGCAAGAGATGCCCTACATG...AACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR-3UTR CAA 90 bp CTTTCCATTTTCATTCAGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAAAAACAGAGTCCAGAGTaGGCACTACGACTGTGCCCT +
Preference number: 3 (lower is better)
Translates to: LSIFIQEVFWLKLFWIRKKQSPE*ALRLCP
Trigger: AGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTT...TTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAATGAAAATGGAAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR TCA 90 bp GGGCATCTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTCGAGCAGGCAGTCGGTaGGGTCCCGGGGACAGTTGG +
Preference number: 4 (lower is better)
Translates to: GHLLPILDGRDSAWPNHPRAGSR*GPGDSW
Trigger: CCAACTGTCCCCGGGACCTCACCGACTGCCTGCTCG...AGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp CATCTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTGTCAAGTGGGCCTCCCTCTaGATCCGGCTCTCATTGCCC +
Preference number: 4 (lower is better)
Translates to: HLLPILDGRDSAWPNHPVKWASL*IRLSLP
Trigger: GGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTT...GACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR CAA 72 bp GTCGGTGAGGTCCCGGGGACAGTTGGGGTCCAGAGATaGATGGTGCTCCTTCACCCTTTCAGACACATACTC +
Preference number: 4 (lower is better)
Translates to: VGEVPGTVGVQR*MVLLHPFRHIL
Trigger: GAGTATGTGTCTGAAAGGGTGAAGGAGCACCATCAATCTCTGGACCCCAACTGTCCCCGGGACCTCACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR TCA 90 bp GGGCATCTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTAGGGTGATGAACCGCTaGATCTCATGCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: GHLLPILDGRDSAWPNHPRVMNR*ISCTTA
Trigger: TGCTGTGGTGCATGAGATTCAGCGGTTCATCACCCT...AGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR GCA 90 bp GGGCATCTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTAATGGTGTCTCGGGTTaGTTCATGGGGCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: GHLLPILDGRDSAWPNHPNGVSG*FMGQVG
Trigger: TCCAACCTGCCCCATGAAGCAACCCGAGACACCATT...AGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR TCA 90 bp GAGGTATCCTCTGAAAATGGTGTCTCGGGTTGCTTCATGGGGCAGGTTGGAGGGTTGGGGTCCAGAGATTaGTGGTGCTCCTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: EVSSENGVSGCFMGQVGGLGSRD*WCSFTL
Trigger: AAGGGTGAAGGAGCACCATCAATCTCTGGACCCCAA...CCCTCCAACCTGCCCCATGAAGCAACCCGAGACACCATTTTCAGAGGATACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR TCA 90 bp CCAGCAGGAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTGCCCTGTTTCCCCAAAAATGATTCCCGGGTaGAGGACTTGGGAATATTCT +
Preference number: 4 (lower is better)
Translates to: PAGSGPPSGSGSHCPVSPKMIPG*RTWEYS
Trigger: AGAATATTCCCAAGTCCTTCACCCGGGAATCATTTT...TGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTCCTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp TCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTGTCAATTGGCAGGGATTCGGCTTaGCCCAATCACCCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SCLSLMAGIRLGPITLSIGRDSA*PNHPVN
Trigger: ATTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCC...AATTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR TCA 90 bp TTGGTTGTCATACAAAACAGAGTCCAGAGTTGGCACTACGACTGTGCCCTTGGGTCTCTTGCCTATCCTTaGTGGCAGGGATTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LVVIQNRVQSWHYDCALGSLAYP*WQGFGL
Trigger: CAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGA...CCCAAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp GAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTGCCCTGTTTCCCCATCCCATACTGTCAATTTCTTCATaGAGCTTCTCTTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: EVGLPLDPALIALFPHPILSISS*SFSSPF
Trigger: AAATGGAGAAGAGAAGCTCCATGAAGAAATTGACAG...TATGGGATGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp GGGGACAGTTGGGGTCCAGAGATTGATGGTGCTCCTTCACCCTTTCAGACACATTTCTTCAATTCCAACTaGAAGAGGTTCCCGATGATG +
Preference number: 4 (lower is better)
Translates to: GDSWGPEIDGAPSPFQTHFFNSN*KRFPMM
Trigger: CATCATCGGGAACCTCTTCCAGTTGGAATTGAAGAA...ATGTGTCTGAAAGGGTGAAGGAGCACCATCAATCTCTGGACCCCAACTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp GTCCCGGGGACAGTTGGGGTCCAGAGATTGATGGTGCTCCTTCACCCTTTCAGATGGCTTAAACTTTTCTaGATCAGGAAATTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: VPGTVGVQRLMVLLHPFRWLKLF*IRKFLV
Trigger: AACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCA...TCTGAAAGGGTGAAGGAGCACCATCAATCTCTGGACCCCAACTGTCCCCGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR TCA 90 bp CTTTCCATTTTCATTCAGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAAGGAAGAGGTTCCCGATaGTGGGAAGCGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LSIFIQEVFWLKLFWIRKGRGSR*WEAGKG
Trigger: GCCCTTTCCCGCTTCCCATCATCGGGAACCTCTTCC...TTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAATGAAAATGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR GCA 90 bp TTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTGGCTTGGGTCTTCCTGAGTaGTTCCAGCAGGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: FSGSGNSWLSYKTESRVGLGLPE*FQQEVG
Trigger: GCCCACTTCCTGCTGGAAGCACTCAGGAAGACCCAA...GCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp AGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACCATAGTTCCGGAGGGTaGTCAGGGAAAACCGCCGGA +
Preference number: 4 (lower is better)
Translates to: RKCSGLNFSGSGNSWLSYHSSGG*SGKTAG
Trigger: TCCGGCGGTTTTCCCTGACCACCCTCCGGAACTATG...GTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp GTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACGGTCCCGGGGACAGTTaGGGTCCAGAGATTGATGGT +
Preference number: 4 (lower is better)
Translates to: VFWLKLFWIRKFLVVIQNGPGDS*GPEIDG
Trigger: ACCATCAATCTCTGGACCCCAACTGTCCCCGGGACC...GTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR TCA 90 bp AGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAGCTTGGGTCTTCCTaGGTGCTTCCAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RKCSGLNFSGSGNSWLSYKLGSS*VLPAGS
Trigger: ACTTCCTGCTGGAAGCACTCAGGAAGACCCAAGCTT...GTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp TTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTGGCAACAGAGTCCAGAGTTaGCACTACGACTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FSGSGNSWLSYKTESRVGNRVQS*HYDCAL
Trigger: AAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTT...GCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp TTGGTTGTCATACAAAACAGAGTCCAGAGTTGGCACTACGACTGTGCCCTTGGGTTTTCCTGTGGAAAATaGCTTGAAATAGTCACTGTA +
Preference number: 4 (lower is better)
Translates to: LVVIQNRVQSWHYDCALGFSCGK*LEIVTV
Trigger: TACAGTGACTATTTCAAGCCATTTTCCACAGGAAAA...CCCAAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR CAA 72 bp TCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTaGTCATACAAAACAGAGTCCAGAGTTGGCACTACG +
Preference number: 4 (lower is better)
Translates to: SGLNFSGSGNSW*SYKTESRVGTT
Trigger: CGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
3UTR CAA 72 bp GTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTaGGTTGTCATACAAAACAGAGTCCAGAGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VFWLKLFWIRKF*VVIQNRVQSWH
Trigger: GTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CCA 90 bp GTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACATTCAGGAAGTGTTCTaGCTTAAACTTTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: VFWLKLFWIRKFLVVIQNIQEVF*LKLFWI
Trigger: GATCCAGAAAAGTTTAAGCCAGAACACTTCCTGAAT...GTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS CCA 90 bp AGCGTGAACACCGGCCCGAAGCGCTGGGCCAACTGCGGAGACCCGTaGCTAGAAGTCAGGCCCGCCGCGCGGCGAGGAGGTGCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SVNTGPKRWANCGDP*LEVRPAARRGGAGL
Trigger: GAGCCCCGCACCTCCTCGCCGCGCGGCGGGCCTGACTTCTAGCCACGGGTCTCCGCAGTTGGCCCAGCGCTTCGGGCCGGTGTTCACGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS GCA 90 bp CGGAGACCCGTGGCTAGAAGTCAGGCCCGCCGCGCGGCGAGGAGGTaGGGGGCTCTAAGCCACACCCCTGCCGGGCGGGTATTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RRPVARSQARRAARR*GALSHTPAGRVLLL
Trigger: CAACAGCAATACCCGCCCGGCAGGGGTGTGGCTTAGAGCCCCGCACCTCCTCGCCGCGCGGCGGGCCTGACTTCTAGCCACGGGTCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS GCA 90 bp TGGTGCAGGAACGAAGCCTCCCGCCTCAGAGGGCGCGGGGCTCTGTaGTGTGTCCTGTCTCCTGTCAGCCGGCTCTGCCCGCACGCTGAG +
Preference number: 5 (lower is better)
Translates to: WCRNEASRLRGRGAL*CVLSPVSRLCPHAE
Trigger: CTCAGCGTGCGGGCAGAGCCGGCTGACAGGAGACAGGACACAGCACAGAGCCCCGCGCCCTCTGAGGCGGGAGGCTTCGTTCCTGCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS TCA 90 bp TGTAGCCGTGCATCACCACCATGCGCTGCGAGCCCACGTACAGCGTaGACACCGGCCCGAAGCGCTGGGCCAACTGCGGAGACCCGTGGC +
Preference number: 5 (lower is better)
Translates to: CSRASPPCAASPRTA*TPARSAGPTAETRG
Trigger: GCCACGGGTCTCCGCAGTTGGCCCAGCGCTTCGGGCCGGTGTTCACGCTGTACGTGGGCTCGCAGCGCATGGTGGTGATGCACGGCTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS GCA 90 bp GGGCGCGGGGCTCTGTGCTGTGTCCTGTCTCCTGTCAGCCGGCTCTaGCCGCACGCTGAGCTGCGGTTATGGCTCCGGGAGCAAACAACC +
Preference number: 5 (lower is better)
Translates to: GRGALCCVLSPVSRL*PHAELRLWLREQTT
Trigger: GGTTGTTTGCTCCCGGAGCCATAACCGCAGCTCAGCGTGCGGGCAGAGCCGGCTGACAGGAGACAGGACACAGCACAGAGCCCCGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS CCA 90 bp AAGGGCCTGGGGGCAGATTCCAGCTGCTGTGCACCTGCCTCCACATaGACACCAGCAGGAGGAAGGCCGCCCACACCAGCAGGGCCACGG +
Preference number: 5 (lower is better)
Translates to: KGLGADSSCCAPAST*TPAGGRPPTPAGPR
Trigger: CCGTGGCCCTGCTGGTGTGGGCGGCCTTCCTCCTGCTGGTGTCCATGTGGAGGCAGGTGCACAGCAGCTGGAATCTGCCCCCAGGCCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000541261.1
CDS GCA 90 bp TCCACCTCAGGACAAGAAGAAGGGGCACCACTCTGGCTGGAGACCTaGCCTCAGCCTGCCTCAGTCTCAGCCCAGGGGTGGCCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: STSGQEEGAPLWLET*PQPASVSAQGWPLA
Trigger: GGCGAGAGGCCACCCCTGGGCTGAGACTGAGGCAGGCTGAGGGCAGGTCTCCAGCCAGAGTGGTGCCCCTTCTTCTTGTCCTGAGGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp ATGATGGGAAGCGGGAAAGGGCCTGGGGGCAGATTCCAGCTGCTGTaGACCTGCCTCCACATGGACACCAGCAGGAGGAAGGCCGCCCAC +
Preference number: 5 (lower is better)
Translates to: MMGSGKGPGGRFQLL*TCLHMDTSRRKAAH
Trigger: GTGGGCGGCCTTCCTCCTGCTGGTGTCCATGTGGAGGCAGGTGCACAGCAGCTGGAATCTGCCCCCAGGCCCTTTCCCGCTTCCCATCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000541261.1
CDS GCA 90 bp CTTTCTCAAGTTAACTCGCCGCGTCCAAAGGGCAAGCCACGCTGGTaGAGGAACGAAGCCTCCCGCCTCAGAGGGCGCGGGGCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LSQVNSPRPKGKPRW*RNEASRLRGRGALC
Trigger: GCACAGAGCCCCGCGCCCTCTGAGGCGGGAGGCTTCGTTCCTGCACCAGCGTGGCTTGCCCTTTGGACGCGGCGAGTTAACTTGAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS CCA 90 bp CCACTTTCTCAAGTTAACTCGCCGCGTCCAAAGGGCAAGCCACGCTaGTGCAGGAACGAAGCCTCCCGCCTCAGAGGGCGCGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PLSQVNSPRPKGKPR*CRNEASRLRGRGAL
Trigger: CAGAGCCCCGCGCCCTCTGAGGCGGGAGGCTTCGTTCCTGCACCAGCGTGGCTTGCCCTTTGGACGCGGCGAGTTAACTTGAGAAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS CCA 90 bp GTTCAGATGCAGTCTAGGAGTCCCAGCCAGGGCTCCCCACACCGCTaGTCTGCAAGAGGACTGGGCCCTGCTAGGCAGCAGATACGCACC +
Preference number: 5 (lower is better)
Translates to: VQMQSRSPSQGSPHR*SARGLGPARQQIRT
Trigger: GGTGCGTATCTGCTGCCTAGCAGGGCCCAGTCCTCTTGCAGACCAGCGGTGTGGGGAGCCCTGGCTGGGACTCCTAGACTGCATCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp GGTCTGCAAGAGGACTGGGCCCTGCTAGGCAGCAGATACGCACCTTaGGTCTTCCTGAGTGCTTCCAGCAGGAAGTGGGCCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GLQEDWALLGSRYAP*VFLSASSRKWASLW
Trigger: CCAGAGGGAGGCCCACTTCCTGCTGGAAGCACTCAGGAAGACCCAAGGTGCGTATCTGCTGCCTAGCAGGGCCCAGTCCTCTTGCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp TGGGCACCAGAGGGTAGGGAGGGGCTCACCTCAAGGGTTCACATTTaGGTTGGGGCCAAGGCTGTGCCCAGCTTCCCATGTGACCGTGAG +
Preference number: 5 (lower is better)
Translates to: WAPEGREGLTSRVHI*VGAKAVPSFPCDRE
Trigger: CTCACGGTCACATGGGAAGCTGGGCACAGCCTTGGCCCCAACCCAAATGTGAACCCTTGAGGTGAGCCCCTCCCTACCCTCTGGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp CTGCCGGGCGGGTATTGCTGTTGCTCTAGAGAACCCAGAGGGACGTaGGGAAAAGCTGTCTTTGTCCAGCCCGAGGTGGGGGAGACCCTC +
Preference number: 5 (lower is better)
Translates to: LPGGYCCCSREPRGT*GKAVFVQPEVGETL
Trigger: GAGGGTCTCCCCCACCTCGGGCTGGACAAAGACAGCTTTTCCCCACGTCCCTCTGGGTTCTCTAGAGCAACAGCAATACCCGCCCGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS TCA 90 bp AGGCTCCTGCCAGCCATGTTCCCACCTCATGATGGGTCTTTGCACTaGCTACCTCCCAACCCCACCCAAATTGCTGCAGGGCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RLLPAMFPPHDGSLH*LPPNPTQIAAGPAP
Trigger: GGGGGCAGGCCCTGCAGCAATTTGGGTGGGGTTGGGAGGTAGTCAGTGCAAAGACCCATCATGAGGTGGGAACATGGCTGGCAGGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp CTGGGCCCTGCTAGGCAGCAGATACGCACCTTGGGTCTTCCTGAGTaGTTCCAGCAGGAAGTGGGCCTCCCTCTGGATCCGGCTCTCATT +
Preference number: 5 (lower is better)
Translates to: LGPARQQIRTLGLPE*FQQEVGLPLDPALI
Trigger: AATGAGAGCCGGATCCAGAGGGAGGCCCACTTCCTGCTGGAAGCACTCAGGAAGACCCAAGGTGCGTATCTGCTGCCTAGCAGGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp GTATCTGGGGACTCACGAGACCCTCTCCTTGTCCGTAGGTCCCTGTaGTTCAGATGCAGTCTAGGAGTCCCAGCCAGGGCTCCCCACACC +
Preference number: 5 (lower is better)
Translates to: VSGDSRDPLLVRRSL*FRCSLGVPARAPHT
Trigger: GGTGTGGGGAGCCCTGGCTGGGACTCCTAGACTGCATCTGAACCACAGGGACCTACGGACAAGGAGAGGGTCTCGTGAGTCCCCAGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS-3UTR CAA 90 bp GAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTGCCCTGTTTCCCCATCCCATAGCTTCATGGGGCAGGTaGGAGGGCACGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: EVGLPLDPALIALFPHPIASWGR*EGTRVM
Trigger: CATCACCCTCGTGCCCTCCAACCTGCCCCATGAAGC...TATGGGATGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS GCA 90 bp GTGCTTCCAGCAGGAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTaGCCTGTTTCCCCATCCCATAGTTCCGGAGGGTGGTCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: VLPAGSGPPSGSGSH*PVSPSHSSGGWSGK
Trigger: TTTCCCTGACCACCCTCCGGAACTATGGGATGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTCCTGCTGGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252945.8
ENST00000368520.1
ENST00000421586.5
ENST00000463117.6
ENST00000477500.5
ENST00000480558.1
ENST00000541080.5
CDS GCA 90 bp CCAGGGCCCTCACAGCCACCCTCTGTAAATGTGAAGGCCCTTTGGTaGTTACAAGGAATGTGGGCACCAGAGGGTAGGGAGGGGCTCACC +
Preference number: 5 (lower is better)
Translates to: PGPSQPPSVNVKALW*LQGMWAPEGREGLT
Trigger: GGTGAGCCCCTCCCTACCCTCTGGTGCCCACATTCCTTGTAAGCACCAAAGGGCCTTCACATTTACAGAGGGTGGCTGTGAGGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp TTCCAACTGGAAGAGGTTCCCGATGATGGGAAGCGGGAAAGGGCCTaGGGGCAGATTCCAGCTGCTGTGCACCTGCCTCCACATGGACAC +
Preference number: 5 (lower is better)
Translates to: FQLEEVPDDGKRERA*GQIPAAVHLPPHGH
Trigger: GTGTCCATGTGGAGGCAGGTGCACAGCAGCTGGAATCTGCCCCCAGGCCCTTTCCCGCTTCCCATCATCGGGAACCTCTTCCAGTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000477500.5
ENST00000541261.1
CDS CCA 90 bp TCCTGGTCTCTGGATTGCTCATCTCTGGTACCTGCCAGCTTCTTCTaGGTCCGCAGGCAGAGGGATGCAGGCCCGAGACGCTCTCACAGT +
Preference number: 5 (lower is better)
Translates to: SWSLDCSSLVPASFF*VRRQRDAGPRRSHS
Trigger: ACTGTGAGAGCGTCTCGGGCCTGCATCCCTCTGCCTGCGGACCCAGAAGAAGCTGGCAGGTACCAGAGATGAGCAATCCAGAGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp CCTCCAGGGCCCTCACAGCCACCCTCTGTAAATGTGAAGGCCCTTTaGTGCTTACAAGGAATGTGGGCACCAGAGGGTAGGGAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PPGPSQPPSVNVKAL*CLQGMWAPEGREGL
Trigger: GAGCCCCTCCCTACCCTCTGGTGCCCACATTCCTTGTAAGCACCAAAGGGCCTTCACATTTACAGAGGGTGGCTGTGAGGGCCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS-3UTR CAA 90 bp CAGCAGGAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTGCCCTGTTTCCCCATTGGATCCGGCTCTCATaGCCCTGTTTCCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: QQEVGLPLDPALIALFPHWIRLS*PCFPIP
Trigger: TGGGATGGGGAAACAGGGCAATGAGAGCCGGATCCA...ATGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS GCA 90 bp GGGAAAGCCAAGAGGAGTGGACAGGCCTCTTTTCTGCCCCTCAGATaGCAGAGCGGCTGGCAAAGGAGATTTGTGCCCTGGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GKAKRSGQASFLPLR*QSGWQRRFVPWTAA
Trigger: TGCTGCTGTCCAGGGCACAAATCTCCTTTGCCAGCCGCTCTGGCATCTGAGGGGCAGAAAAGAGGCCTGTCCACTCCTCTTGGCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp AACCGGATTAATGAGGTCCAGCAAGGTGAGTTCAGGGGCCTTGGCTaGCAGCTAGGACCAGCTGCATGGTTTGCGGGGCTCAGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: NRINEVQQGEFRGLG*QLGPAAWFAGLSAK
Trigger: CTTGGCACTGAGCCCCGCAAACCATGCAGCTGGTCCTAGCTGGCAGCCAAGGCCCCTGAACTCACCTTGCTGGACCTCATTAATCCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp TGCGTGAAAGCAGCAGAGACACAAGGCTGGCAACCGCCCCAACTCTaGCTGCCCTGTCAACTCAACCTCCTTTCCTCCGTGCAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: CVKAAETQGWQPPQL*LPCQLNLLSSVQWE
Trigger: TTCCCACTGCACGGAGGAAAGGAGGTTGAGTTGACAGGGCAGGCAGAGTTGGGGCGGTTGCCAGCCTTGTGTCTCTGCTGCTTTCACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp TTGCCCACCCAGAACGTGAGCCCCGTGAGGGCCCCACAGAGCACCTaGTTGCAGGAGGTACTCAATAGATCTGTGTTGCGTGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LPTQNVSPVRAPQST*LQEVLNRSVLRESS
Trigger: GCTGCTTTCACGCAACACAGATCTATTGAGTACCTCCTGCAAGCAGGTGCTCTGTGGGGCCCTCACGGGGCTCACGTTCTGGGTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS-3UTR CAA 90 bp CCAGCAGGAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTGCCCTGTTTCCCCACATGTAGGGCATCTCTaGCCTATCCTTGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: PAGSGPPSGSGSHCPVSPHVGHL*PILDGR
Trigger: CCTGCCATCAAGGATAGGCAAGAGATGCCCTACATG...TGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTCCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CAA 90 bp CCAGCAGGAAGTGGGCCTCCCTCTGGATCCGGCTCTCATTGCCCTGTTTCCCCAAAACAGAGTCCAGAGTaGGCACTACGACTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: PAGSGPPSGSGSHCPVSPKQSPE*ALRLCP
Trigger: AGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTT...TGGGGAAACAGGGCAATGAGAGCCGGATCCAGAGGGAGGCCCACTTCCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS TCA 90 bp AGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTaGAGCCTTGGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RSRGQAQDPQSPVTD*SLGLTLPLGLGQRY
Trigger: GTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp TTGAGGCATGGGGGAAAGCCAAGAGGAGTGGACAGGCCTCTTTTCTaGCCCTCAGATGCCAGAGCGGCTGGCAAAGGAGATTTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LRHGGKPRGVDRPLF*PSDARAAGKGDLCP
Trigger: AGGGCACAAATCTCCTTTGCCAGCCGCTCTGGCATCTGAGGGGCAGAAAAGAGGCCTGTCCACTCCTCTTGGCTTTCCCCCATGCCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp CCCCACAGAGCACCTGCTTGCAGGAGGTACTCAATAGATCTGTGTTaGGTGAAAGCAGCAGAGACACAAGGCTGGCAACCGCCCCAACTC +
Preference number: 5 (lower is better)
Translates to: PHRAPACRRYSIDLC*VKAAETQGWQPPQL
Trigger: GAGTTGGGGCGGTTGCCAGCCTTGTGTCTCTGCTGCTTTCACGCAACACAGATCTATTGAGTACCTCCTGCAAGCAGGTGCTCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp TGGGCCAACCGGGTGAAGGACTTGGGAATATTCTTCAATTCCAACTaGAAGAGGTTCCCGATGATGGGAAGCGGGAAAGGGCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: WANRVKDLGIFFNSN*KRFPMMGSGKGPGG
Trigger: GCCCCCAGGCCCTTTCCCGCTTCCCATCATCGGGAACCTCTTCCAGTTGGAATTGAAGAATATTCCCAAGTCCTTCACCCGGTTGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000477500.5
ENST00000541261.1
CDS CCA 90 bp TCCAGGCTTGTGCCTTTGCCAACCCACAGAAGCCCACTCTCCCTATaGCAGCTGAAGCCTTTTGAAACCTGTCCCAGCTTGCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SRLVPLPTHRSPLSL*QLKPFETCPSLPLS
Trigger: GGAGAGAGGCAAGCTGGGACAGGTTTCAAAAGGCTTCAGCTGCCATAGGGAGAGTGGGCTTCTGTGGGTTGGCAAAGGCACAAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 90 bp TTGTGCCTTTGCCAACCCACAGAAGCCCACTCTCCCTATGGCAGCTaGAGCCTTTTGAAACCTGTCCCAGCTTGCCTCTCTCCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LCLCQPTEAHSPYGS*SLLKPVPACLSPVA
Trigger: AGCCACAGGAGAGAGGCAAGCTGGGACAGGTTTCAAAAGGCTTCAGCTGCCATAGGGAGAGTGGGCTTCTGTGGGTTGGCAAAGGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp CCATATCTGACCTCACGTGCCTTCATGTGCTCACCTGCCCCTTTGTaGTGCAGAGAAGCTGGTCAAGGCGACACTGGAAGACGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: PYLTSRAFMCSPAPL*CREAGQGDTGRREA
Trigger: TGCTTCACGTCTTCCAGTGTCGCCTTGACCAGCTTCTCTGCAGCACAAAGGGGCAGGTGAGCACATGAAGGCACGTGAGGTCAGATATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 90 bp CCTGACATGATCTGGCTGTGTTCCCCCTGCCAAAACCCAATACCTTaGCAGGTTCTCATAGGGCCCTGTTGCTCTCCCTACAGAGACCCT +
Preference number: 5 (lower is better)
Translates to: PDMIWLCSPCQNPIP*QVLIGPCCSPYRDP
Trigger: AGGGTCTCTGTAGGGAGAGCAACAGGGCCCTATGAGAACCTGTCAAGGTATTGGGTTTTGGCAGGGGGAACACAGCCAGATCATGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 90 bp AAGTACAGGGCATTTCAGCATGCGACTGCCATAGTTACATGCCCATaGTCCTGGCCCTGCTATCAGCAGAGCCTGGCAAGGAGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: KYRAFQHATAIVTCP*SWPCYQQSLARRAG
Trigger: TCCAGCTCTCCTTGCCAGGCTCTGCTGATAGCAGGGCCAGGATCATGGGCATGTAACTATGGCAGTCGCATGCTGAAATGCCCTGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp TATCTGACCTCACGTGCCTTCATGTGCTCACCTGCCCCTTTGTGCTaGAGAGAAGCTGGTCAAGGCGACACTGGAAGACGTGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: YLTSRAFMCSPAPLC*REAGQGDTGRREAS
Trigger: TGATGCTTCACGTCTTCCAGTGTCGCCTTGACCAGCTTCTCTGCAGCACAAAGGGGCAGGTGAGCACATGAAGGCACGTGAGGTCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp CTTGGACAGGCTGTGAAGGTGGTGATTTCAGCCCATATCCCCTCATaGCTGTGGTTGGTTCCCAGGTTGGCATTCGAGGAACAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LGQAVKVVISAHIPS*LWLVPRLAFEEQLE
Trigger: TTCCAGCTGTTCCTCGAATGCCAACCTGGGAACCAACCACAGGCATGAGGGGATATGGGCTGAAATCACCACCTTCACAGCCTGTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 90 bp AAAACCCTGTCCCAAACCTCTCGCTGGTCACCCATCTGGCTCCACTaGAGTCCATTAGATCCAGAAGTTGCCGCCTTCACTTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: KTLSQTSRWSPIWLH*SPLDPEVAAFTSLP
Trigger: AGGAAGGGAAGTGAAGGCGGCAACTTCTGGATCTAATGGACTGCAGTGGAGCCAGATGGGTGACCAGCGAGAGGTTTGGGACAGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp GATGAGACCAAGGTCAAGTCTTCCATCACTGTCCGTGGATGTGTCTaGGACCATCACGGGCACAAAGGAGACAACGAGGATAAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: DETKVKSSITVRGCV*DHHGHKGDNEDKQP
Trigger: GGGCTGCTTATCCTCGTTGTCTCCTTTGTGCCCGTGATGGTCCCAGACACATCCACGGACAGTGATGGAAGACTTGACCTTGGTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp CCTGAATCCAGTCCCTTGTCACCTCCTTGTGACCCTGCTGCTCAGTaGTCAGGGGGATCTCTGATGAGACCAAGGTCAAGTCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: PESSPLSPPCDPAAQ*SGGSLMRPRSSLPS
Trigger: TGATGGAAGACTTGACCTTGGTCTCATCAGAGATCCCCCTGACCACTGAGCAGCAGGGTCACAAGGAGGTGACAAGGGACTGGATTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp CCACCCTCTGTAAATGTGAAGGCCCTTTGGTGCTTACAAGGAATGTaGGCACCAGAGGGTAGGGAGGGGCTCACCTCAAGGGTTCACATT +
Preference number: 5 (lower is better)
Translates to: PPSVNVKALWCLQGM*APEGREGLTSRVHI
Trigger: AATGTGAACCCTTGAGGTGAGCCCCTCCCTACCCTCTGGTGCCCACATTCCTTGTAAGCACCAAAGGGCCTTCACATTTACAGAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 90 bp AGGACTTGGGAATATTCTTCAATTCCAACTGGAAGAGGTTCCCGATaGTGGGAAGCGGGAAAGGGCCTGGGGGCAGATTCCAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RTWEYSSIPTGRGSR*WEAGKGLGADSSCC
Trigger: ACAGCAGCTGGAATCTGCCCCCAGGCCCTTTCCCGCTTCCCATCATCGGGAACCTCTTCCAGTTGGAATTGAAGAATATTCCCAAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000477500.5
ENST00000541261.1
CDS CCA 90 bp CAGAAAGGTCGTGTGTCTCCTTTGTGTGAGGCACAGCCTGAGGTTTaGGGCCAGGCAGATGTGGGTTTAATTTCAGGCCCCACAATGTAC +
Preference number: 5 (lower is better)
Translates to: QKGRVSPLCEAQPEV*GQADVGLISGPTMY
Trigger: GTACATTGTGGGGCCTGAAATTAAACCCACATCTGCCTGGCCCCAAACCTCAGGCTGTGCCTCACACAAAGGAGACACACGACCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS-3UTR CAA 90 bp GAGGTATCCTCTGAAAATGGTGTCTCGGGTTGCTTCATGGGGCAGGTTGGAGGGTCCCGGGTGAAGGACTaGGGAATATTCTTCAATTCC +
Preference number: 5 (lower is better)
Translates to: EVSSENGVSGCFMGQVGGSRVKD*GIFFNS
Trigger: GGAATTGAAGAATATTCCCAAGTCCTTCACCCGGGA...CCCTCCAACCTGCCCCATGAAGCAACCCGAGACACCATTTTCAGAGGATACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CAA 90 bp CATCTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTGTCAGTAGTGTAGAAAGCTaGGGTCTTCCTGAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: HLLPILDGRDSAWPNHPVSSVES*GLPECF
Trigger: GAAGCACTCAGGAAGACCCAAGCTTTCTACACTACT...GACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS CCA 90 bp TGGAGATTCAAGGTGGTGAAGATGTTCCCAGTGGAGCAGAGACCATaGGCAAAGCACCCCAAAATCTGCCTGAAGAACCACAGACTTGGA +
Preference number: 5 (lower is better)
Translates to: WRFKVVKMFPVEQRP*AKHPKICLKNHRLG
Trigger: TCCAAGTCTGTGGTTCTTCAGGCAGATTTTGGGGTGCTTTGCCCATGGTCTCTGCTCCACTGGGAACATCTTCACCACCTTGAATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp CATATCTCAGGAGCACTTCCCACTCCTTTGCTCTTTAGCCTCCCTTaGCCTACTTCATTTCTCTTGAACACGGTTACCGCAGCCCCATTC +
Preference number: 5 (lower is better)
Translates to: HISGALPTPLLFSLP*PTSFLLNTVTAAPF
Trigger: GAATGGGGCTGCGGTAACCGTGTTCAAGAGAAATGAAGTAGGCCAAGGGAGGCTAAAGAGCAAAGGAGTGGGAAGTGCTCCTGAGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp CTGCCAGCCCGGGAGACAATCCTGAATCACCACCTGCCACATGAATaGGGCCAGAAGGAAAATTCAACATCGGAATTCGATTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: LPARETILNHHLPHE*GQKENSTSEFDSTF
Trigger: GAAAGTGGAATCGAATTCCGATGTTGAATTTTCCTTCTGGCCCCATTCATGTGGCAGGTGGTGATTCAGGATTGTCTCCCGGGCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463117.6
ENST00000541261.1
CDS GCA 90 bp AGGATGACTGGCATTCCCCAATCATCCCATTTAAAGATGGCACCCTaGCTCCATCTGGTCACATGCCCCATCCTATTTGATGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: RMTGIPQSSHLKMAP*LHLVTCPILFDVFL
Trigger: AAGAAACACATCAAATAGGATGGGGCATGTGACCAGATGGAGGCAGGGTGCCATCTTTAAATGGGATGATTGGGGAATGCCAGTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 90 bp ATAATGTCAAAGATGGGGGTTAGAAAAGCTGGCTACACTGAGCCATaGAGATTCAAGGTGGTGAAGATGTTCCCAGTGGAGCAGAGACCA +
Preference number: 5 (lower is better)
Translates to: IMSKMGVRKAGYTEP*RFKVVKMFPVEQRP
Trigger: TGGTCTCTGCTCCACTGGGAACATCTTCACCACCTTGAATCTCCATGGCTCAGTGTAGCCAGCTTTTCTAACCCCCATCTTTGACATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS-3UTR CAA 90 bp CTCTTGCCTATCCTTGATGGCAGGGATTCGGCTTGGCCCAATCACCCTGTCAATTCAGGAAATTCTTGGTaGTCATACAAAACAGAGTCC +
Preference number: 5 (lower is better)
Translates to: LLPILDGRDSAWPNHPVNSGNSW*SYKTES
Trigger: GGACTCTGTTTTGTATGACAACCAAGAATTTCCTGA...ATTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCCATCAAGGATAGGCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS CCA 90 bp TGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTaGCACTACGACTGTGCCCTAGGAGAAACAAAGACTGTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: WIRKFLVVIQNRVQS*HYDCALGETKTVSV
Trigger: CACTGAGACAGTCTTTGTTTCTCCTAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469258.1
CDS-3UTR CAA 90 bp AACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTTGGCAGGGATTCGGCTaGGCCCAATCACCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: NFSGSGNSWLSYKTESRVWQGFG*AQSPCQ
Trigger: TTGACAGGGTGATTGGGCCAAGCCGAATCCCTGCCA...AACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CAA 90 bp AGGAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAATGGTGTCTCGGGTaGCTTCATGGGGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: RKCSGLNFSGSGNSWLSYKWCLG*LHGAGW
Trigger: CCAACCTGCCCCATGAAGCAACCCGAGACACCATTT...GTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CAA 90 bp GTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACGTTGGGGTCCAGAGATaGATGGTGCTCCTTCACCCT +
Preference number: 5 (lower is better)
Translates to: VFWLKLFWIRKFLVVIQNVGVQR*MVLLHP
Trigger: AGGGTGAAGGAGCACCATCAATCTCTGGACCCCAAC...GTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS CCA 90 bp ACATTAATCTCTCTTAACCTGACAACAATACTTCCAGGGGGCAAATaGTCATGTCACTCCCTACTTACCACATGTTACAGAGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: TLISLNLTTILPGGK*SCHSLLTTCYREGP
Trigger: AGGTCCTTCTCTGTAACATGTGGTAAGTAGGGAGTGACATGACCATTTGCCCCCTGGAAGTATTGTTGTCAGGTTAAGAGAGATTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS-3UTR CAA 90 bp GAAGTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAATCTCTTGCCTATCCTaGATGGCAGGGATTCGGCTT +
Preference number: 5 (lower is better)
Translates to: EVFWLKLFWIRKFLVVIQISCLS*MAGIRL
Trigger: AAGCCGAATCCCTGCCATCAAGGATAGGCAAGAGAT...TTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS-3UTR CAA 90 bp GTGTTCTGGCTTAAACTTTTCTGGATCAGGAAATTCTTGGTTGTCATACAAAACTGGATCAGGAAATTCTaGGTTGTCATACAAAACAGA +
Preference number: 5 (lower is better)
Translates to: VFWLKLFWIRKFLVVIQNWIRKF*VVIQNR
Trigger: TCTGTTTTGTATGACAACCAAGAATTTCCTGATCCA...GTTTTGTATGACAACCAAGAATTTCCTGATCCAGAAAAGTTTAAGCCAGAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541080.5
CDS GCA 72 bp GTGGCTAGAAGTCAGGCCCGCCGCGCGGCGAGGAGGTaGGGGGCTCTAAGCCACACCCCTGCCGGGCGGGTA +
Preference number: 6 (lower is better)
Translates to: VARSQARRAARR*GALSHTPAGRV
Trigger: TACCCGCCCGGCAGGGGTGTGGCTTAGAGCCCCGCACCTCCTCGCCGCGCGGCGGGCCTGACTTCTAGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS CCA 72 bp ACCGGCCCGAAGCGCTGGGCCAACTGCGGAGACCCGTaGCTAGAAGTCAGGCCCGCCGCGCGGCGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: TGPKRWANCGDP*LEVRPAARRGG
Trigger: ACCTCCTCGCCGCGCGGCGGGCCTGACTTCTAGCCACGGGTCTCCGCAGTTGGCCCAGCGCTTCGGGCCGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS CCA 72 bp TGCCCGCTTCCGGAATCAAGGTTCTGGACCCGGTTCTaGCGCGGGAGCCCGAGCTGGAGCAGGCGACCCCCG +
Preference number: 6 (lower is better)
Translates to: CPLPESRFWTRF*RGSPSWSRRPP
Trigger: CGGGGGTCGCCTGCTCCAGCTCGGGCTCCCGCGCCAGAACCGGGTCCAGAACCTTGATTCCGGAAGCGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS GCA 72 bp AACGAAGCCTCCCGCCTCAGAGGGCGCGGGGCTCTGTaGTGTGTCCTGTCTCCTGTCAGCCGGCTCTGCCCG +
Preference number: 6 (lower is better)
Translates to: NEASRLRGRGAL*CVLSPVSRLCP
Trigger: CGGGCAGAGCCGGCTGACAGGAGACAGGACACAGCACAGAGCCCCGCGCCCTCTGAGGCGGGAGGCTTCGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS TCA 72 bp GCATCACCACCATGCGCTGCGAGCCCACGTACAGCGTaGACACCGGCCCGAAGCGCTGGGCCAACTGCGGAG +
Preference number: 6 (lower is better)
Translates to: ASPPCAASPRTA*TPARSAGPTAE
Trigger: CTCCGCAGTTGGCCCAGCGCTTCGGGCCGGTGTTCACGCTGTACGTGGGCTCGCAGCGCATGGTGGTGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS GCA 72 bp GTTAACTCGCCGCGTCCAAAGGGCAAGCCACGCTGGTaGAGGAACGAAGCCTCCCGCCTCAGAGGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: VNSPRPKGKPRW*RNEASRLRGRG
Trigger: CCCGCGCCCTCTGAGGCGGGAGGCTTCGTTCCTGCACCAGCGTGGCTTGCCCTTTGGACGCGGCGAGTTAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS GCA 72 bp GCTCTGTGCTGTGTCCTGTCTCCTGTCAGCCGGCTCTaGCCGCACGCTGAGCTGCGGTTATGGCTCCGGGAG +
Preference number: 6 (lower is better)
Translates to: ALCCVLSPVSRL*PHAELRLWLRE
Trigger: CTCCCGGAGCCATAACCGCAGCTCAGCGTGCGGGCAGAGCCGGCTGACAGGAGACAGGACACAGCACAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS CCA 72 bp GCCAGGGCTCCCCACACCGCTGGTCTGCAAGAGGACTaGGCCCTGCTAGGCAGCAGATACGCACCTTGGGTC +
Preference number: 6 (lower is better)
Translates to: ARAPHTAGLQED*ALLGSRYAPWV
Trigger: GACCCAAGGTGCGTATCTGCTGCCTAGCAGGGCCCAGTCCTCTTGCAGACCAGCGGTGTGGGGAGCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CAGTCTAGGAGTCCCAGCCAGGGCTCCCCACACCGCTaGTCTGCAAGAGGACTGGGCCCTGCTAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: QSRSPSQGSPHR*SARGLGPARQQ
Trigger: CTGCTGCCTAGCAGGGCCCAGTCCTCTTGCAGACCAGCGGTGTGGGGAGCCCTGGCTGGGACTCCTAGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp TGTCCTGTCTCCTGTCAGCCGGCTCTGCCCGCACGCTaGGCTGCGGTTATGGCTCCGGGAGCAAACAACCCG +
Preference number: 6 (lower is better)
Translates to: CPVSCQPALPAR*AAVMAPGANNP
Trigger: CGGGTTGTTTGCTCCCGGAGCCATAACCGCAGCTCAGCGTGCGGGCAGAGCCGGCTGACAGGAGACAGGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS GCA 72 bp GCCTGTGACACGGCCTCAGGAGGTCCTGATGACCTGTaGCCAGGGTGGCAGGGTGGTCAGAGCACAGGTTGG +
Preference number: 6 (lower is better)
Translates to: ACDTASGGPDDL*PGWQGGQSTGW
Trigger: CCAACCTGTGCTCTGACCACCCTGCCACCCTGGGCACAGGTCATCAGGACCTCCTGAGGCCGTGTCACAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CTGAGTGTGCACATCCCAGGCGGGACCCGCGTGCCCTaGAGAGTCTGTGCCTCACAGGGATGCAGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: LSVHIPGGTRVP*RVCASQGCSCG
Trigger: ACCACAGCTGCATCCCTGTGAGGCACAGACTCTCCAGGGCACGCGGGTCCCGCCTGGGATGTGCACACTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541261.1
CDS CAA 72 bp TGTGCTCCCTGTGTGGGGCTGAGGGCCCCTCCACCCTaGATGAGGGACTCTTTCTCCGCAGCCAGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: CAPCVGLRAPPP*MRDSFSAARRL
Trigger: CAGCCTCCTGGCTGCGGAGAAAGAGTCCCTCATCAAGGGTGGAGGGGCCCTCAGCCCCACACAGGGAGCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp AGCATCAGCTGTGCTCCCTGTGTGGGGCTGAGGGCCCCTCCACCCTaGATGAGGGACTCTTTCTCCGCAGCCAGGAGGCTGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: SISCAPCVGLRAPPP*MRDSFSAARRLQPQ
Trigger: CTGTGGCTGCAGCCTCCTGGCTGCGGAGAAAGAGTCCCTCATCAAGGGTGGAGGGGCCCTCAGCCCCACACAGGGAGCACAGCTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp AGCGGGAAAGGGCCTGGGGGCAGATTCCAGCTGCTGTaGACCTGCCTCCACATGGACACCAGCAGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SGKGPGGRFQLL*TCLHMDTSRRK
Trigger: CTTCCTCCTGCTGGTGTCCATGTGGAGGCAGGTGCACAGCAGCTGGAATCTGCCCCCAGGCCCTTTCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000477500.5
ENST00000541261.1
CDS GCA 72 bp TGTCCCTGTGCGCATGGAACGCGGGGAGGTCGCCTCTaGCCGAGAACTCGTCCTTGTAGTCCAGCAGCGCTT +
Preference number: 6 (lower is better)
Translates to: CPCAHGTRGGRL*PRTRPCSPAAL
Trigger: AAGCGCTGCTGGACTACAAGGACGAGTTCTCGGGCAGAGGCGACCTCCCCGCGTTCCATGCGCACAGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000477500.5
ENST00000480558.1
CDS GCA 72 bp TGTCTCCTGTCAGCCGGCTCTGCCCGCACGCTGAGCTaGGGTTATGGCTCCGGGAGCAAACAACCCGGAAGT +
Preference number: 6 (lower is better)
Translates to: CLLSAGSARTLS*GYGSGSKQPGS
Trigger: ACTTCCGGGTTGTTTGCTCCCGGAGCCATAACCGCAGCTCAGCGTGCGGGCAGAGCCGGCTGACAGGAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463117.6
CDS CCA 72 bp GGGAGGGGGTCCTGGGACTCCTCAGAGGATGGTCTATaGGGAGGGCCTTTCCCATACTGGGTCCACCCAAGG +
Preference number: 6 (lower is better)
Translates to: GRGSWDSSEDGL*GGPFPYWVHPR
Trigger: CCTTGGGTGGACCCAGTATGGGAAAGGCCCTCCCCATAGACCATCCTCTGAGGAGTCCCAGGACCCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp CCCCAGAAGTGGGCGTCAGGGAACAGAAACAGCTACTaGAGGGACAGCGGAAGGGGCGGGAGGACAAGGGAG +
Preference number: 6 (lower is better)
Translates to: PQKWASGNRNSY*RDSGRGGRTRE
Trigger: CTCCCTTGTCCTCCCGCCCCTTCCGCTGTCCCTTCAGTAGCTGTTTCTGTTCCCTGACGCCCACTTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp AGCCCAGTGCCCTCCTGGGGCTTAAGAGAACATGGCTaGGGGCTGCCTCGCCTCTCCCAGGAAGCACACCAT +
Preference number: 6 (lower is better)
Translates to: SPVPSWGLREHG*GLPRLSQEAHH
Trigger: ATGGTGTGCTTCCTGGGAGAGGCGAGGCAGCCCTCAGCCATGTTCTCTTAAGCCCCAGGAGGGCACTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp GAAGAGGTTCCCGATGATGGGAAGCGGGAAAGGGCCTaGGGGCAGATTCCAGCTGCTGTGCACCTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: EEVPDDGKRERA*GQIPAAVHLPP
Trigger: TGGAGGCAGGTGCACAGCAGCTGGAATCTGCCCCCAGGCCCTTTCCCGCTTCCCATCATCGGGAACCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000477500.5
ENST00000541261.1
CDS CCA 72 bp GAGGACTGGGCCCTGCTAGGCAGCAGATACGCACCTTaGGTCTTCCTGAGTGCTTCCAGCAGGAAGTGGGCC +
Preference number: 6 (lower is better)
Translates to: EDWALLGSRYAP*VFLSASSRKWA
Trigger: GGCCCACTTCCTGCTGGAAGCACTCAGGAAGACCCAAGGTGCGTATCTGCTGCCTAGCAGGGCCCAGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CTGGATTGCTCATCTCTGGTACCTGCCAGCTTCTTCTaGGTCCGCAGGCAGAGGGATGCAGGCCCGAGACGC +
Preference number: 6 (lower is better)
Translates to: LDCSSLVPASFF*VRRQRDAGPRR
Trigger: GCGTCTCGGGCCTGCATCCCTCTGCCTGCGGACCCAGAAGAAGCTGGCAGGTACCAGAGATGAGCAATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp CACCAGAGGGTAGGGAGGGGCTCACCTCAAGGGTTCACATTTGGGTaGGGGCCAAGGCTGTGCCCAGCTTCCCATGTGACCGTGAGCAAG +
Preference number: 6 (lower is better)
Translates to: HQRVGRGSPQGFTFG*GPRLCPASHVTVSK
Trigger: CTTGCTCACGGTCACATGGGAAGCTGGGCACAGCCTTGGCCCCAACCCAAATGTGAACCCTTGAGGTGAGCCCCTCCCTACCCTCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp AAGTGCACAGGGAGGGAATGGCCAGTGCCATGGCCCTaGGGCTGTACTGTAGCTGGTGTGCACAGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: KCTGREWPVPWP*GCTVAGVHRGA
Trigger: TGCCCCTCTGTGCACACCAGCTACAGTACAGCCTCAGGGCCATGGCACTGGCCATTCCCTCCCTGTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp AGCACCAGGCCCAAACGGTCACTTCTTCCTCTCACCTaGCACAACCAGTCGCCAAGCAAGCCCTGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: STRPKRSLLPLT*HNQSPSKPWWC
Trigger: GCACCACCAGGGCTTGCTTGGCGACTGGTTGTGGCAGGTGAGAGGAAGAAGTGACCGTTTGGGCCTGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp AATGAGGTCCAGCAAGGTGAGTTCAGGGGCCTTGGCTaGCAGCTAGGACCAGCTGCATGGTTTGCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: NEVQQGEFRGLG*QLGPAAWFAGL
Trigger: GAGCCCCGCAAACCATGCAGCTGGTCCTAGCTGGCAGCCAAGGCCCCTGAACTCACCTTGCTGGACCTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp GCAGCAGAGACACAAGGCTGGCAACCGCCCCAACTCTaGCTGCCCTGTCAACTCAACCTCCTTTCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: AAETQGWQPPQL*LPCQLNLLSSV
Trigger: CACGGAGGAAAGGAGGTTGAGTTGACAGGGCAGGCAGAGTTGGGGCGGTTGCCAGCCTTGTGTCTCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CCATGTGGCCATGGGGATGGGTGTAAATTCCCACCCTaGACACTAACCTCCTGCAGGCCAGTCCCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: PCGHGDGCKFPP*TLTSCRPVPSP
Trigger: GGGGCTTGGGACTGGCCTGCAGGAGGTTAGTGTCCAGGGTGGGAATTTACACCCATCCCCATGGCCACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp AGGACAAGGGAGGGGGTCCTGGGACTCCTCAGAGGATaGTCTATGGGGAGGGCCTTTCCCATACTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: RTREGVLGLLRG*SMGRAFPILGP
Trigger: TGGACCCAGTATGGGAAAGGCCCTCCCCATAGACCATCCTCTGAGGAGTCCCAGGACCCCCTCCCTTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp GAGGGTAGGGAGGGGCTCACCTCAAGGGTTCACATTTaGGTTGGGGCCAAGGCTGTGCCCAGCTTCCCATGT +
Preference number: 6 (lower is better)
Translates to: EGREGLTSRVHI*VGAKAVPSFPC
Trigger: ACATGGGAAGCTGGGCACAGCCTTGGCCCCAACCCAAATGTGAACCCTTGAGGTGAGCCCCTCCCTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp CCTCACCCGCTACTCCCTCTTTGCTCGCTAGGCTCCTaGCAGCCATGTTCCCACCTCATGATGGGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: PHPLLPLCSLGS*QPCSHLMMGLC
Trigger: GCAAAGACCCATCATGAGGTGGGAACATGGCTGGCAGGAGCCTAGCGAGCAAAGAGGGAGTAGCGGGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp GACTCACGAGACCCTCTCCTTGTCCGTAGGTCCCTGTaGTTCAGATGCAGTCTAGGAGTCCCAGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: DSRDPLLVRRSL*FRCSLGVPARA
Trigger: AGCCCTGGCTGGGACTCCTAGACTGCATCTGAACCACAGGGACCTACGGACAAGGAGAGGGTCTCGTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CAGGCCTCTTTTCTGCCCCTCAGATGCCAGAGCGGCTaGCAAAGGAGATTTGTGCCCTGGACAGCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: QASFLPLRCQSG*QRRFVPWTAAR
Trigger: CCTTGCTGCTGTCCAGGGCACAAATCTCCTTTGCCAGCCGCTCTGGCATCTGAGGGGCAGAAAAGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp ACGGCCTCAGGAGGTCCTGATGACCTGTGCCCAGGGTaGCAGGGTGGTCAGAGCACAGGTTGGTTTTATGCT +
Preference number: 6 (lower is better)
Translates to: TASGGPDDLCPG*QGGQSTGWFYA
Trigger: AGCATAAAACCAACCTGTGCTCTGACCACCCTGCCACCCTGGGCACAGGTCATCAGGACCTCCTGAGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp GGTATTTGCCGCTCCCCTGTCTCCAGGCTTGTGCCTTaGCCAACCCACAGAAGCCCACTCTCCCTATGGCAG +
Preference number: 6 (lower is better)
Translates to: GICRSPVSRLVP*PTHRSPLSLWQ
Trigger: CTGCCATAGGGAGAGTGGGCTTCTGTGGGTTGGCAAAGGCACAAGCCTGGAGACAGGGGAGCGGCAAATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp CCCACCCAGAACGTGAGCCCCGTGAGGGCCCCACAGAGCACCTGCTaGCAGGAGGTACTCAATAGATCTGTGTTGCGTGAAAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: PTQNVSPVRAPQSTC*QEVLNRSVLRESSR
Trigger: TCTGCTGCTTTCACGCAACACAGATCTATTGAGTACCTCCTGCAAGCAGGTGCTCTGTGGGGCCCTCACGGGGCTCACGTTCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp CTCAGCCTGCCTCAGTCTCAGCCCAGGGGTGGCCTCTCGCCCTGCTaGATTCTGAAATGTTTGGTTTTGTCTCCACAGGGCAGGACACGT +
Preference number: 6 (lower is better)
Translates to: LSLPQSQPRGGLSPC*ILKCLVLSPQGRTR
Trigger: ACGTGTCCTGCCCTGTGGAGACAAAACCAAACATTTCAGAATCAAGCAGGGCGAGAGGCCACCCCTGGGCTGAGACTGAGGCAGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp AACCTCCTGGTCTCTGGATTGCTCATCTCTGGTACCTaGCAGCTTCTTCTGGGTCCGCAGGCAGAGGGATGC +
Preference number: 6 (lower is better)
Translates to: NLLVSGLLISGT*QLLLGPQAEGC
Trigger: GCATCCCTCTGCCTGCGGACCCAGAAGAAGCTGGCAGGTACCAGAGATGAGCAATCCAGAGACCAGGAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp GGGTATTGCTGTTGCTCTAGAGAACCCAGAGGGACGTaGGGAAAAGCTGTCTTTGTCCAGCCCGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: GYCCCSREPRGT*GKAVFVQPEVG
Trigger: CCCCACCTCGGGCTGGACAAAGACAGCTTTTCCCCACGTCCCTCTGGGTTCTCTAGAGCAACAGCAATACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480558.1
CDS CAA 90 bp CAAGCCCTGGTGGTGCTAAGATCGACATTGCCTGAATCCAGTCCCTaGTCACCTCCTTGTGACCCTGCTGCTCAGTGGTCAGGGGGATCT +
Preference number: 6 (lower is better)
Translates to: QALVVLRSTLPESSP*SPPCDPAAQWSGGS
Trigger: AGATCCCCCTGACCACTGAGCAGCAGGGTCACAAGGAGGTGACAAGGGACTGGATTCAGGCAATGTCGATCTTAGCACCACCAGGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp CCACAACCAGTCGCCAAGCAAGCCCTGGTGGTGCTAAGATCGACATaGCCTGAATCCAGTCCCTTGTCACCTCCTTGTGACCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: PQPVAKQALVVLRST*PESSPLSPPCDPAA
Trigger: AGCAGCAGGGTCACAAGGAGGTGACAAGGGACTGGATTCAGGCAATGTCGATCTTAGCACCACCAGGGCTTGCTTGGCGACTGGTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp GCCCCACAGAGCACCTGCTTGCAGGAGGTACTCAATAGATCTGTGTaGCGTGAAAGCAGCAGAGACACAAGGCTGGCAACCGCCCCAACT +
Preference number: 6 (lower is better)
Translates to: APQSTCLQEVLNRSV*RESSRDTRLATAPT
Trigger: AGTTGGGGCGGTTGCCAGCCTTGTGTCTCTGCTGCTTTCACGCAACACAGATCTATTGAGTACCTCCTGCAAGCAGGTGCTCTGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp CTGTCCCCGCAAAGAACAGGTCGGCCACAGTCACGGTaGTACCGTCCATTGTGTACAAGCGCTCTGCACTGT +
Preference number: 6 (lower is better)
Translates to: LSPQRTGRPQSR*YRPLCTSALHC
Trigger: ACAGTGCAGAGCGCTTGTACACAATGGACGGTATCACCGTGACTGTGGCCGACCTGTTCTTTGCGGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252945.8
ENST00000368520.1
ENST00000418356.1
ENST00000421586.5
ENST00000463117.6
CDS GCA 72 bp TCACGTGCCTTCATGTGCTCACCTGCCCCTTTGTGCTaGAGAGAAGCTGGTCAAGGCGACACTGGAAGACGT +
Preference number: 6 (lower is better)
Translates to: SRAFMCSPAPLC*REAGQGDTGRR
Trigger: ACGTCTTCCAGTGTCGCCTTGACCAGCTTCTCTGCAGCACAAAGGGGCAGGTGAGCACATGAAGGCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp ACCTCACGTGCCTTCATGTGCTCACCTGCCCCTTTGTaGTGCAGAGAAGCTGGTCAAGGCGACACTGGAAGA +
Preference number: 6 (lower is better)
Translates to: TSRAFMCSPAPL*CREAGQGDTGR
Trigger: TCTTCCAGTGTCGCCTTGACCAGCTTCTCTGCAGCACAAAGGGGCAGGTGAGCACATGAAGGCACGTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp CCAGCTAGGACCAGCTGCATGGTTTGCGGGGCTCAGTaGCAAGTGAGAATGCAGGGTCCCTTGTTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: PARTSCMVCGAQ*QVRMQGPLFQS
Trigger: ACTTTGGAACAAGGGACCCTGCATTCTCACTTGGCACTGAGCCCCGCAAACCATGCAGCTGGTCCTAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CAGCTGCTCAAGGAAGGTGAGACCAGGGAAGGTGGATaGCCCATATCTGACCTCACGTGCCTTCATGTGCTC +
Preference number: 6 (lower is better)
Translates to: QLLKEGETREGG*PISDLTCLHVL
Trigger: GAGCACATGAAGGCACGTGAGGTCAGATATGGGCCATCCACCTTCCCTGGTCTCACCTTCCTTGAGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp TCTCATAGGGCCCTGTTGCTCTCCCTACAGAGACCCTaGGGATCCTCCGGCTGCATTGCCAGGAAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: SHRALLLSLQRP*GSSGCIARKRK
Trigger: TTTCCTTTTCCTGGCAATGCAGCCGGAGGATCCTCAGGGTCTCTGTAGGGAGAGCAACAGGGCCCTATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp CAGAAGCCCACTCTCCCTATGGCAGCTGAAGCCTTTTaGAACCTGTCCCAGCTTGCCTCTCTCCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: QKPTLPMAAEAF*NLSQLASLLWL
Trigger: AAGCCACAGGAGAGAGGCAAGCTGGGACAGGTTTCAAAAGGCTTCAGCTGCCATAGGGAGAGTGGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp TGCCAACCCACAGAAGCCCACTCTCCCTATGGCAGCTaGAGCCTTTTGAAACCTGTCCCAGCTTGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: CQPTEAHSPYGS*SLLKPVPACLS
Trigger: AGAGAGGCAAGCTGGGACAGGTTTCAAAAGGCTTCAGCTGCCATAGGGAGAGTGGGCTTCTGTGGGTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp GCATTTCAGCATGCGACTGCCATAGTTACATGCCCATaGTCCTGGCCCTGCTATCAGCAGAGCCTGGCAAGG +
Preference number: 6 (lower is better)
Translates to: AFQHATAIVTCP*SWPCYQQSLAR
Trigger: CCTTGCCAGGCTCTGCTGATAGCAGGGCCAGGATCATGGGCATGTAACTATGGCAGTCGCATGCTGAAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp AACAAGGTATTTGCCGCTCCCCTGTCTCCAGGCTTGTaGCTTTGCCAACCCACAGAAGCCCACTCTCCCTAT +
Preference number: 6 (lower is better)
Translates to: NKVFAAPLSPGL*LCQPTEAHSPY
Trigger: ATAGGGAGAGTGGGCTTCTGTGGGTTGGCAAAGGCACAAGCCTGGAGACAGGGGAGCGGCAAATACCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp TCCTGCCAGCCATGTTCCCACCTCATGATGGGTCTTTaGACTGACTACCTCCCAACCCCACCCAAATTGCTG +
Preference number: 6 (lower is better)
Translates to: SCQPCSHLMMGL*TDYLPTPPKLL
Trigger: CAGCAATTTGGGTGGGGTTGGGAGGTAGTCAGTGCAAAGACCCATCATGAGGTGGGAACATGGCTGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp AGTCCCTTGTCACCTCCTTGTGACCCTGCTGCTCAGTaGTCAGGGGGATCTCTGATGAGACCAAGGTCAAGT +
Preference number: 6 (lower is better)
Translates to: SPLSPPCDPAAQ*SGGSLMRPRSS
Trigger: ACTTGACCTTGGTCTCATCAGAGATCCCCCTGACCACTGAGCAGCAGGGTCACAAGGAGGTGACAAGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp GTGCCTTTGCCAACCCACAGAAGCCCACTCTCCCTATaGCAGCTGAAGCCTTTTGAAACCTGTCCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: VPLPTHRSPLSL*QLKPFETCPSL
Trigger: CAAGCTGGGACAGGTTTCAAAAGGCTTCAGCTGCCATAGGGAGAGTGGGCTTCTGTGGGTTGGCAAAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp GTAAATGTGAAGGCCCTTTGGTGCTTACAAGGAATGTaGGCACCAGAGGGTAGGGAGGGGCTCACCTCAAGG +
Preference number: 6 (lower is better)
Translates to: VNVKALWCLQGM*APEGREGLTSR
Trigger: CCTTGAGGTGAGCCCCTCCCTACCCTCTGGTGCCCACATTCCTTGTAAGCACCAAAGGGCCTTCACATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CCCTCACAGCCACCCTCTGTAAATGTGAAGGCCCTTTaGTGCTTACAAGGAATGTGGGCACCAGAGGGTAGG +
Preference number: 6 (lower is better)
Translates to: PSQPPSVNVKAL*CLQGMWAPEGR
Trigger: CCTACCCTCTGGTGCCCACATTCCTTGTAAGCACCAAAGGGCCTTCACATTTACAGAGGGTGGCTGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CATGTCCTGCCAATCTCCCCCTCTCCTCTCTGCTTGTaGGAGTGTTCAGGAAACACCCTCCAACCTCATTCC +
Preference number: 6 (lower is better)
Translates to: HVLPISPSPLCL*ECSGNTLQPHS
Trigger: GGAATGAGGTTGGAGGGTGTTTCCTGAACACTCCCACAAGCAGAGAGGAGAGGGGGAGATTGGCAGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp ACCGGCCCGAAGCGCTGGGCCAACCGGGTGAAGGACTaGGGAATATTCTTCAATTCCAACTGGAAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: TGPKRWANRVKD*GIFFNSNWKRF
Trigger: GAACCTCTTCCAGTTGGAATTGAAGAATATTCCCAAGTCCTTCACCCGGTTGGCCCAGCGCTTCGGGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000477500.5
ENST00000541261.1
CDS CAA 72 bp GTCGCCAAGCAAGCCCTGGTGGTGCTAAGATCGACATaGCCTGAATCCAGTCCCTTGTCACCTCCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: VAKQALVVLRST*PESSPLSPPCD
Trigger: GTCACAAGGAGGTGACAAGGGACTGGATTCAGGCAATGTCGATCTTAGCACCACCAGGGCTTGCTTGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp AAAAACAAGGTATTTGCCGCTCCCCTGTCTCCAGGCTaGTGCCTTTGCCAACCCACAGAAGCCCACTCTCCC +
Preference number: 6 (lower is better)
Translates to: KNKVFAAPLSPG*CLCQPTEAHSP
Trigger: GGGAGAGTGGGCTTCTGTGGGTTGGCAAAGGCACAAGCCTGGAGACAGGGGAGCGGCAAATACCTTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp CCTCATGTCCTGCCAATCTCCCCCTCTCCTCTCTGCTaGTGGGAGTGTTCAGGAAACACCCTCCAACCTCAT +
Preference number: 6 (lower is better)
Translates to: PHVLPISPSPLC*WECSGNTLQPH
Trigger: ATGAGGTTGGAGGGTGTTTCCTGAACACTCCCACAAGCAGAGAGGAGAGGGGGAGATTGGCAGGACATGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp ATCTGGCTGTGTTCCCCCTGCCAAAACCCAATACCTTaGCAGGTTCTCATAGGGCCCTGTTGCTCTCCCTAC +
Preference number: 6 (lower is better)
Translates to: IWLCSPCQNPIP*QVLIGPCCSPY
Trigger: GTAGGGAGAGCAACAGGGCCCTATGAGAACCTGTCAAGGTATTGGGTTTTGGCAGGGGGAACACAGCCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp GCTGTGAAGGTGGTGATTTCAGCCCATATCCCCTCATaGCTGTGGTTGGTTCCCAGGTTGGCATTCGAGGAA +
Preference number: 6 (lower is better)
Translates to: AVKVVISAHIPS*LWLVPRLAFEE
Trigger: TTCCTCGAATGCCAACCTGGGAACCAACCACAGGCATGAGGGGATATGGGCTGAAATCACCACCTTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp AAAACCCTGTCCCAAACCTCTCGCTGGTCACCCATCTaGCTCCACTGCAGTCCATTAGATCCAGAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: KTLSQTSRWSPI*LHCSPLDPEVA
Trigger: GGCAACTTCTGGATCTAATGGACTGCAGTGGAGCCAGATGGGTGACCAGCGAGAGGTTTGGGACAGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp GGCACAAAGGAGACAACGAGGATAAGCAGCCCGTGTTaGTCCCCCAGGAGGATCCTAGGCACTGAACAAGAA +
Preference number: 6 (lower is better)
Translates to: GTKETTRISSPC*SPRRILGTEQE
Trigger: TTCTTGTTCAGTGCCTAGGATCCTCCTGGGGGACAAACACGGGCTGCTTATCCTCGTTGTCTCCTTTGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp GTGGTGCTAAGATCGACATTGCCTGAATCCAGTCCCTaGTCACCTCCTTGTGACCCTGCTGCTCAGTGGTCA +
Preference number: 6 (lower is better)
Translates to: VVLRSTLPESSP*SPPCDPAAQWS
Trigger: TGACCACTGAGCAGCAGGGTCACAAGGAGGTGACAAGGGACTGGATTCAGGCAATGTCGATCTTAGCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp GTGGTGATTTCAGCCCATATCCCCTCATGCCTGTGGTaGGTTCCCAGGTTGGCATTCGAGGAACAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: VVISAHIPSCLW*VPRLAFEEQLE
Trigger: TTCCAGCTGTTCCTCGAATGCCAACCTGGGAACCAACCACAGGCATGAGGGGATATGGGCTGAAATCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp GCTGTGAAGGTGGTGATTTCAGCCCATATCCCCTCATGCCTGTGGTaGGTTCCCAGGTTGGCATTCGAGGAACAGCTGGAAGATCTGATG +
Preference number: 6 (lower is better)
Translates to: AVKVVISAHIPSCLW*VPRLAFEEQLEDLM
Trigger: CATCAGATCTTCCAGCTGTTCCTCGAATGCCAACCTGGGAACCAACCACAGGCATGAGGGGATATGGGCTGAAATCACCACCTTCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp TCATTTCTCTTGAACACGGTTACCGCAGCCCCATTCGGTATCTTATaGTGTCTGTTCCCAGTCTTGCCCACCCAGAACGTGAGCCCCGTG +
Preference number: 6 (lower is better)
Translates to: SFLLNTVTAAPFGIL*CLFPVLPTQNVSPV
Trigger: CACGGGGCTCACGTTCTGGGTGGGCAAGACTGGGAACAGACACAATAAGATACCGAATGGGGCTGCGGTAACCGTGTTCAAGAGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp GGCCCTCAGGTCCCTTCCCATATCTCAGGAGCACTTCCCACTCCTTaGCTCTTTAGCCTCCCTTGGCCTACTTCATTTCTCTTGAACACG +
Preference number: 6 (lower is better)
Translates to: GPQVPSHISGALPTP*LFSLPWPTSFLLNT
Trigger: CGTGTTCAAGAGAAATGAAGTAGGCCAAGGGAGGCTAAAGAGCAAAGGAGTGGGAAGTGCTCCTGAGATATGGGAAGGGACCTGAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp GTTCAGGGTGTCCTCCACACACTCATGAGCGGGGAATaGCACAGAGTTTGTAACGTGGTGGGATACAGCCAA +
Preference number: 6 (lower is better)
Translates to: VQGVLHTLMSGE*HRVCNVVGYSQ
Trigger: TTGGCTGTATCCCACCACGTTACAAACTCTGTGTCATTCCCCGCTCATGAGTGTGTGGAGGACACCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000469258.1
CDS CCA 72 bp AAGGTCAAGTCTTCCATCACTGTCCGTGGATGTGTCTaGGACCATCACGGGCACAAAGGAGACAACGAGGAT +
Preference number: 6 (lower is better)
Translates to: KVKSSITVRGCV*DHHGHKGDNED
Trigger: ATCCTCGTTGTCTCCTTTGTGCCCGTGATGGTCCCAGACACATCCACGGACAGTGATGGAAGACTTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp CTATGGCAGCTGAAGCCTTTTGAAACCTGTCCCAGCTaGCCTCTCTCCTGTGGCTTCCACCAGACATGTAGT +
Preference number: 6 (lower is better)
Translates to: LWQLKPFETCPS*PLSCGFHQTCS
Trigger: ACTACATGTCTGGTGGAAGCCACAGGAGAGAGGCAAGCTGGGACAGGTTTCAAAAGGCTTCAGCTGCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp AGCACCTGCTTGCAGGAGGTACTCAATAGATCTGTGTaGCGTGAAAGCAGCAGAGACACAAGGCTGGCAACC +
Preference number: 6 (lower is better)
Translates to: STCLQEVLNRSV*RESSRDTRLAT
Trigger: GGTTGCCAGCCTTGTGTCTCTGCTGCTTTCACGCAACACAGATCTATTGAGTACCTCCTGCAAGCAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp GAAGGTGGGGTCGAAAGGCTGGCCCGGGTGAAGGACTaGGGAATATTCTTCAATTCCAACTGGAAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: EGGVERLARVKD*GIFFNSNWKRF
Trigger: GAACCTCTTCCAGTTGGAATTGAAGAATATTCCCAAGTCCTTCACCCGGGCCAGCCTTTCGACCCCACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418356.1
CDS CAA 90 bp ACCATCACGGGCACAAAGGAGACAACGAGGATAAGCAGCCCGTGTTaGTCCCCCAGGAGGATCCTAGGCACTGAACAAGAAAATAGACAG +
Preference number: 6 (lower is better)
Translates to: TITGTKETTRISSPC*SPRRILGTEQENRQ
Trigger: CTGTCTATTTTCTTGTTCAGTGCCTAGGATCCTCCTGGGGGACAAACACGGGCTGCTTATCCTCGTTGTCTCCTTTGTGCCCGTGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp CCCAGGGGTGGCCTCTCGCCCTGCTTGATTCTGAAATGTTTGGTTTaGTCTCCACAGGGCAGGACACGTCCTCACAGAAAATTGAAGACT +
Preference number: 6 (lower is better)
Translates to: PRGGLSPCLILKCLV*SPQGRTRPHRKLKT
Trigger: AGTCTTCAATTTTCTGTGAGGACGTGTCCTGCCCTGTGGAGACAAAACCAAACATTTCAGAATCAAGCAGGGCGAGAGGCCACCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp AGTCACGGTGATACCGTCCATTGTGTACAAGCGCTCTaGACTGTGCTTTTCCTTCTCCATTTCCACGAGCAG +
Preference number: 6 (lower is better)
Translates to: SHGDTVHCVQAL*TVLFLLHFHEQ
Trigger: CTGCTCGTGGAAATGGAGAAGGAAAAGCACAGTGCAGAGCGCTTGTACACAATGGACGGTATCACCGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252945.8
ENST00000368520.1
ENST00000418356.1
ENST00000421586.5
ENST00000463117.6
CDS CAA 72 bp GAAACACCCTCCAACCTCATTCCCACCTCAGGGCTTTaGCCAGACGCTGTCTGTGCTTCCTCAGATAATACA +
Preference number: 6 (lower is better)
Translates to: ETPSNLIPTSGL*PDAVCASSDNT
Trigger: TGTATTATCTGAGGAAGCACAGACAGCGTCTGGCAAAAGCCCTGAGGTGGGAATGAGGTTGGAGGGTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp GGCCTCTCGCCCTGCTTGATTCTGAAATGTTTGGTTTaGTCTCCACAGGGCAGGACACGTCCTCACAGAAAA +
Preference number: 6 (lower is better)
Translates to: GLSPCLILKCLV*SPQGRTRPHRK
Trigger: TTTTCTGTGAGGACGTGTCCTGCCCTGTGGAGACAAAACCAAACATTTCAGAATCAAGCAGGGCGAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp GGCATTCCCCAATCATCCCATTTAAAGATGGCACCCTaGCTCCATCTGGTCACATGCCCCATCCTATTTGAT +
Preference number: 6 (lower is better)
Translates to: GIPQSSHLKMAP*LHLVTCPILFD
Trigger: ATCAAATAGGATGGGGCATGTGACCAGATGGAGGCAGGGTGCCATCTTTAAATGGGATGATTGGGGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp ATGTTAAAGCTCAATCAGGTGTCCACAGACCTGACATaGTCTGGCTGTGTTCCCCCTGCCAAAACCCAATAC +
Preference number: 6 (lower is better)
Translates to: MLKLNQVSTDLT*SGCVPPAKTQY
Trigger: GTATTGGGTTTTGGCAGGGGGAACACAGCCAGATCATGTCAGGTCTGTGGACACCTGATTGAGCTTTAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS GCA 72 bp GGTTCACCAAGGCCTGTGAGAAGGTGCCCTGAAAACTaGCAGTTTACGAAAGATAGTGAATGTCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: GSPRPVRRCPEN*QFTKDSECLNL
Trigger: CAGGTTCAGACATTCACTATCTTTCGTAAACTGGCAGTTTTCAGGGCACCTTCTCACAGGCCTTGGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CGGGAGACAATCCTGAATCACCACCTGCCACATGAATaGGGCCAGAAGGAAAATTCAACATCGGAATTCGAT +
Preference number: 6 (lower is better)
Translates to: RETILNHHLPHE*GQKENSTSEFD
Trigger: ATCGAATTCCGATGTTGAATTTTCCTTCTGGCCCCATTCATGTGGCAGGTGGTGATTCAGGATTGTCTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463117.6
ENST00000541261.1
CDS CAA 72 bp CACCCTGCCTCCATCTGGTCACATGCCCCATCCTATTaGATGTGTTTCTTTATAGCCCTTATCCCACTTCGT +
Preference number: 6 (lower is better)
Translates to: HPASIWSHAPSY*MCFFIALIPLR
Trigger: ACGAAGTGGGATAAGGGCTATAAAGAAACACATCAAATAGGATGGGGCATGTGACCAGATGGAGGCAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp TTGCTCTTTAGCCTCCCTTGGCCTACTTCATTTCTCTaGAACACGGTTACCGCAGCCCCATTCGGTATCTTA +
Preference number: 6 (lower is better)
Translates to: LLFSLPWPTSFL*NTVTAAPFGIL
Trigger: TAAGATACCGAATGGGGCTGCGGTAACCGTGTTCAAGAGAAATGAAGTAGGCCAAGGGAGGCTAAAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp GTGCTTGCAGGTTTATCTGTTGTAAATAACAATCCATaGGCATCCCCACTGCAGTACCGCAGAGATGTGGGA +
Preference number: 6 (lower is better)
Translates to: VLAGLSVVNNNP*ASPLQYRRDVG
Trigger: TCCCACATCTCTGCGGTACTGCAGTGGGGATGCTCATGGATTGTTATTTACAACAGATAAACCTGCAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 90 bp CTGGATCAGGAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTaGGCACTACGACTGTGCCCTAGGAGAAACAAAGACTGTCTCAGT +
Preference number: 6 (lower is better)
Translates to: LDQEILGCHTKQSPE*ALRLCPRRNKDCLS
Trigger: ACTGAGACAGTCTTTGTTTCTCCTAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTCCTGATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469258.1
CDS CCA 72 bp TCTCTTAACCTGACAACAATACTTCCAGGGGGCAAATaGTCATGTCACTCCCTACTTACCACATGTTACAGA +
Preference number: 6 (lower is better)
Translates to: SLNLTTILPGGK*SCHSLLTTCYR
Trigger: TCTGTAACATGTGGTAAGTAGGGAGTGACATGACCATTTGCCCCCTGGAAGTATTGTTGTCAGGTTAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp TTTTTCTTGAATTATATCAGGAGCTTTGATCTTACTTaGAACAGCCTCAGCAGTGAGAGTGCACCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: FFLNYIRSFDLT*NSLSSESAPLP
Trigger: GGGCAGGGGTGCACTCTCACTGCTGAGGCTGTTCAAAGTAAGATCAAAGCTCCTGATATAATTCAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CAA 72 bp GAAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTaGGCACTACGACTGTGCCCTAGGAGAAACAAAGAC +
Preference number: 6 (lower is better)
Translates to: EILGCHTKQSPE*ALRLCPRRNKD
Trigger: GTCTTTGTTTCTCCTAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469258.1
CDS CCA 72 bp AAATTCTTGGTTGTCATACAAAACAGAGTCCAGAGTTaGCACTACGACTGTGCCCTAGGAGAAACAAAGACT +
Preference number: 6 (lower is better)
Translates to: KFLVVIQNRVQS*HYDCALGETKT
Trigger: AGTCTTTGTTTCTCCTAGGGCACAGTCGTAGTGCCAACTCTGGACTCTGTTTTGTATGACAACCAAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469258.1
CDS CCA 72 bp AAACCCAATATGTATAGGGCTGAGGTCGATATCCTTTaGGTCAACGAGAGGCTTCAAATTAAAATGCTGCAA +
Preference number: 6 (lower is better)
Translates to: KPNMYRAEVDIL*VNERLQIKMLQ
Trigger: TTGCAGCATTTTAATTTGAAGCCTCTCGTTGACCCAAAGGATATCGACCTCAGCCCTATACATATTGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252945.8
ENST00000463117.6
ENST00000469258.1
CDS TCA 72 bp ATGTCTATTCACTCATCTGTCTGTTCATTTAGGCATTaGGCCAACCATTTGTCCATTCTCTCTCCATTCATC +
Preference number: 6 (lower is better)
Translates to: MSIHSSVCSFRH*ANHLSILSPFI
Trigger: GATGAATGGAGAGAGAATGGACAAATGGTTGGCTCAATGCCTAAATGAACAGACAGATGAGTGAATAGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS CCA 72 bp CAAATCAACATATGTAAGATGAACATTGGTTCGATCTaGAAAGGTGGGACAACTCAAAGCAATGATGAGACA +
Preference number: 6 (lower is better)
Translates to: QINICKMNIGSI*KGGTTQSNDET
Trigger: TGTCTCATCATTGCTTTGAGTTGTCCCACCTTTCCAGATCGAACCAATGTTCATCTTACATATGTTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp CTGAAAACTGCCAGTTTACGAAAGATAGTGAATGTCTaGACCTGTTTGAGTTTCCTTTGCTTTTCAACAGTA +
Preference number: 6 (lower is better)
Translates to: LKTASLRKIVNV*TCLSFLCFSTV
Trigger: TACTGTTGAAAAGCAAAGGAAACTCAAACAGGTTCAGACATTCACTATCTTTCGTAAACTGGCAGTTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368520.1
CDS TCA 72 bp GCCTTTCCAAAGGAGGCAATCAGATATGCATTTATCTaGGTAAGAAGAAGGATGACTGAATTATTTTCAGAT +
Preference number: 6 (lower is better)
Translates to: AFPKEAIRYAFI*VRRRMTELFSD
Trigger: ATCTGAAAATAATTCAGTCATCCTTCTTCTTACTCAGATAAATGCATATCTGATTGCCTCCTTTGGAAAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368520.1