Pregenerated sensors for CYP2C19 (Homo sapiens)
Ensembl gene IDs: ENSG00000165841Ensembl transcript IDs: ENST00000371321.9, ENST00000645461.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAGTAGGAGTAGGAGATGTAACAAAAGAAGCAAGTGTTTGGAGTaGAAGAAAAAGGAGTTCATGAGCCAAGGAATGCAGGCAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SSRSRRCNKRSKCLE*KKKEFMSQGMQAAF Trigger: AAAGGCTGCCTGCATTCCTTGGCTCATGAACTCCTTTTTCTTTCACTCCAAACACTTGCTTCTTTTGTTACATCTCCTACTCCTACTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR TCA 90 bp | AACTTCTACTTTCCAGTCAGATTGCCCTTGTCCAATTGTTGGCTCTaGCACTTAAAAAGCTGTGTGACCTTGAACAAGATGCTTAACAGA | + |
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Preference number: 1 (lower is better) Translates to: NFYFPVRLPLSNCWL*HLKSCVTLNKMLNR Trigger: TCTGTTAAGCATCTTGTTCAAGGTCACACAGCTTTTTAAGTGTCAGAGCCAACAATTGGACAAGGGCAATCTGACTGGAAAGTAGAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACCCAGGAGGTGGAGATTaGAGTGAGCCGAGATCGCAC | + |
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Preference number: 2 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYPGGGD*SEPRSH Trigger: GTGCGATCTCGGCTCACTGCAATCTCCACCTCCTGG...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAGGCAGGAGAATCTCTTaGGCCTGGGAGGCGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LHKGERIRVVGVGDVTKEGRRIS*AWEAKV Trigger: AACCTTCGCCTCCCAGGCTCAAGAGATTCTCCTGCC...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACGCAGCCTTTAGGAGCTaGAATAGGCAGGAAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYAAFRS*NRQENR Trigger: TCTGTTTTCCTGCCTATTTCAGCTCCTAAAGGCTGC...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACATTCCTCCCAATACCTaGTCCTCTGAATATTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYIPPNT*SSEYFP Trigger: AGGGAAATATTCAGAGGATCAGGTATTGGGAGGAAT...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAGGCAGGAGAACCACTTaGATCCAGGAGGTGGAGATT | + |
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Preference number: 2 (lower is better) Translates to: LHKGERIRVVGVGDVTKEGRRTT*IQEVEI Trigger: AATCTCCACCTCCTGGATTCAAGTGGTTCTCCTGCC...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAGAAAAAGGAGTTCATaGGCCAAGGAATGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LHKGERIRVVGVGDVTKERKRSS*AKECRQ Trigger: CTGCCTGCATTCCTTGGCTCATGAACTCCTTTTTCT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAATCCTGGCTAACATGGTaGAACCCTGTCTGTACTAAA | + |
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Preference number: 2 (lower is better) Translates to: LHKGERIRVVGVGDVTKESWLTW*NPVCTK Trigger: TTTAGTACAGACAGGGTTTCACCATGTTAGCCAGGA...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR CCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAATACAAAAATTAGCCTaGTGTGGTGGTAGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: LHKGERIRVVGVGDVTKEIQKLA*CGGRHL Trigger: CAGGTGCCTACCACCACACCAGGCTAATTTTTGTAT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAGCTTGTTCTAGGAGATaGGCTGTGAAAAGCATAATC | + |
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Preference number: 2 (lower is better) Translates to: LHKGERIRVVGVGDVTKEACSRR*AVKSII Trigger: GATTATGCTTTTCACAGCTCATCTCCTAGAACAAGC...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR GCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAATTGTCACCTGCATTATaGACAAAGGAAGGAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LHKGERIRVVGVGDVTKELSPAL*TKEGRS Trigger: AGACCTTCCTTCCTTTGTGCATAATGCAGGTGACAA...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR TCA 72 bp | GAAGCAAGTGTTTGGAGTGAAAGAAAAAGGAGTTCATaGGCCAAGGAATGCAGGCAGCCTTTAGGAGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: EASVWSERKRSS*AKECRQPLGAE Trigger: TTCAGCTCCTAAAGGCTGCCTGCATTCCTTGGCTCATGAACTCCTTTTTCTTTCACTCCAAACACTTGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR CAA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAGGCAGGAGAATCTCTaGAGCCTGGGAGGCGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LHKGERIRVVGVGDVTKERQENL*SLGGEG Trigger: ACCTTCGCCTCCCAGGCTCAAGAGATTCTCCTGCCT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR-3UTR CAA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAGGCAGGAGAACCACTaGAATCCAGGAGGTGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: LHKGERIRVVGVGDVTKERQENH*NPGGGD Trigger: ATCTCCACCTCCTGGATTCAAGTGGTTCTCCTGCCT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACGGCAGGAGAACCACTTaGATCCAGGAGGTGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYGRRTT*IQEVEI Trigger: AATCTCCACCTCCTGGATTCAAGTGGTTCTCCTGCC...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACAGAAAAAGGAGTTCATaGGCCAAGGAATGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYRKRSS*AKECRQ Trigger: CTGCCTGCATTCCTTGGCTCATGAACTCCTTTTTCT...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACTCCTGGCTAACATGGTaGAACCCTGTCTGTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYSWLTW*NPVCTK Trigger: TTTAGTACAGACAGGGTTTCACCATGTTAGCCAGGA...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR GCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACACTTTCCAGTCAGATTaGCCTTGTCCAATTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYTFQSD*PCPIVG Trigger: GCCAACAATTGGACAAGGGCAATCTGACTGGAAAGT...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR CAA 72 bp | CTTCTACTTTCCAGTCAGATTGCCCTTGTCCAATTGTaGGCTCTGACACTTAAAAAGCTGTGTGACCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLLSSQIALVQL*ALTLKKLCDLE Trigger: TTCAAGGTCACACAGCTTTTTAAGTGTCAGAGCCAACAATTGGACAAGGGCAATCTGACTGGAAAGTAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| 3UTR CAA 72 bp | CAACTTCTACTTTCCAGTCAGATTGCCCTTGTCCAATaGTTGGCTCTGACACTTAAAAAGCTGTGTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: QLLLSSQIALVQ*LALTLKKLCDL Trigger: AAGGTCACACAGCTTTTTAAGTGTCAGAGCCAACAATTGGACAAGGGCAATCTGACTGGAAAGTAGAAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAGTCCCGAGGGTTGTTaGTGTCCATCGATTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LHKGERIRVVGVGDVTKESPEGC*CPSILG Trigger: ACCAAGAATCGATGGACATCAACAACCCTCGGGACT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CCA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACAAATTATTGCATATCTaGATCCAGGGGGTGCTTACA | + |
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Preference number: 4 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYKLLHI*IQGVLT Trigger: TGTAAGCACCCCCTGGATCCAGATATGCAATAATTT...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAGTGGGATCACAGGGTaGAGCCTTGGTTTTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LHKGERIRVVGVGDVTKESGITG*SLGFSQ Trigger: TTGAGAAAAACCAAGGCTTCACCCTGTGATCCCACT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAACACAGGGTGAAGCCTTaGTTTTTCTCAACTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LHKGERIRVVGVGDVTKEHRVKP*FFSTPP Trigger: TGGAGGAGTTGAGAAAAACCAAGGCTTCACCCTGTG...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAACACAAAAGGATCCATTaGAGCCTTCTCCTCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: LHKGERIRVVGVGDVTKEHKRIH*SLLLLL Trigger: TAACAAGAGGAGAAGGCTTCAATGGATCCTTTTGTG...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAATCCAATTGTTGGCTCTaGCACTTAAAAAGCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LHKGERIRVVGVGDVTKESNCWL*HLKSCV Trigger: CACACAGCTTTTTAAGTGTCAGAGCCAACAATTGGA...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR TCA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAGCAAGTGTTTGGAGTaGAAGAAAAAGGAGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: LHKGERIRVVGVGDVTKESKCLE*KKKEFM Trigger: CATGAACTCCTTTTTCTTTCACTCCAAACACTTGCT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACAGGCAGGAGAACCACTaGAATCCAGGAGGTGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYRQENH*NPGGGD Trigger: ATCTCCACCTCCTGGATTCAAGTGGTTCTCCTGCCT...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACTCACAGGGTGAAGCCTaGGTTTTTCTCAACTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYSQGEA*VFLNSS Trigger: GGAGGAGTTGAGAAAAACCAAGGCTTCACCCTGTGA...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACATAAAGTCCCGAGGGTaGTTGATGTCCATCGATTCT | + |
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Preference number: 5 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYIKSRG*LMSIDS Trigger: AGAATCGATGGACATCAACAACCCTCGGGACTTTAT...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACGCCCTTGTCCAATTGTaGGCTCTGACACTTAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYALVQL*ALTLKK Trigger: CTTTTTAAGTGTCAGAGCCAACAATTGGACAAGGGC...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACATAGTGGGAAAATTATaGCATATCTGGATCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYIVGKL*HIWIQG Trigger: CCCCTGGATCCAGATATGCAATAATTTTCCCACTAT...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | CTGGACATGAAGAGATTACACTGGTGGGTTTCATGTAATCACAAGGGTCTTTACCAGGGCCATAGATTTTaGAGAGATTGGTTAAGGATT | + |
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Preference number: 5 (lower is better) Translates to: LDMKRLHWWVSCNHKGLYQGHRF*RDWLRI Trigger: AATCCTTAACCAATCTCTCAAAAATCTATGGCCCTG...GTAAAGACCCTTGTGATTACATGAAACCCACCAGTGTAATCTCTTCATGTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAAGTCCCGAGGGTTGTaGATGTCCATCGATTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LHKGERIRVVGVGDVTKEKSRGL*MSIDSW Trigger: CCAAGAATCGATGGACATCAACAACCCTCGGGACTT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS-3UTR CAA 90 bp | TTACATAAGGGAGAGAGAATAAGAGTAGTAGGAGTAGGAGATGTAACAAAAGAAAGATCATCAGTGCAATaGTTTGGTTGTTCAAATGGG | + |
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Preference number: 5 (lower is better) Translates to: LHKGERIRVVGVGDVTKERSSVQ*FGCSNG Trigger: CCCATTTGAACAACCAAACAATTGCACTGATGATCT...TTCTTTTGTTACATCTCCTACTCCTACTACTCTTATTCTCTCTCCCTTATGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371321.9 |
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| CDS CAA 72 bp | AGATGGCCTATGATGTTCAAGGCAATGGTCAGACAATaGCTACACAGATTACAATTAACCCTCACACCAACA | + |
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Preference number: 6 (lower is better) Translates to: RWPMMFKAMVRQ*LHRLQLTLTPT Trigger: TGTTGGTGTGAGGGTTAATTGTAATCTGTGTAGCAATTGTCTGACCATTGCCTTGAACATCATAGGCCATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645461.1 |
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| CDS CCA 72 bp | AAAGTTTGTAAACACACCAATCAGCACTCTGTAAAATaGAACAATCAGCACTCTGTAAAATGGACCAATCAG | + |
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Preference number: 6 (lower is better) Translates to: KVCKHTNQHSVK*NNQHSVKWTNQ Trigger: CTGATTGGTCCATTTTACAGAGTGCTGATTGTTCCATTTTACAGAGTGCTGATTGGTGTGTTTACAAACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645461.1 |
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