RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP26C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187553

Ensembl transcript IDs: ENST00000624358.3, ENST00000651965.1

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCGGTAGCCCCCGGACACTGGCGGCAGGAGGCGCAGCACCTCCTTaGCCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCGAGGC +
Preference number: 1 (lower is better)
Translates to: CGSPRTLAAGGAAPP*PRSRRSADGPAPRG
Trigger: GCCTCGCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGCCTCCTGCCGCCAGTGTCCGGGGGCTACCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 90 bp CGCGCGGTGCGCACTAGCTCCACAGCTAGCAGCTGGAGCACGGCTTaGGCCAGCTCCTGGCCGAGGCAGCTGCGCGCACCGCCGCCGAAC +
Preference number: 1 (lower is better)
Translates to: RAVRTSSTASSWSTA*ASSWPRQLRAPPPN
Trigger: GTTCGGCGGCGGTGCGCGCAGCTGCCTCGGCCAGGAGCTGGCGCAAGCCGTGCTCCAGCTGCTAGCTGTGGAGCTAGTGCGCACCGCGCG
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp AGTCCGACCGACTGGCAGGACGCCTGCCACCGAGACCCCAAACTCTaGCGGCCCGCGCTTGCTCAGGCTGGAGCGCGTCGCGGCAGGCGC +
Preference number: 1 (lower is better)
Translates to: SPTDWQDACHRDPKL*RPALAQAGARRGRR
Trigger: GCGCCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTCGGTCGGACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp CGCACGCGCGCCCCAGCCCCTGCGCCACCAGCTCCTCCCGAATCTTaGCGATGGCCGCCGGATGCTGCAGTAGCAGCAGGACGAGCGAGG +
Preference number: 1 (lower is better)
Translates to: RTRAPAPAPPAPPES*RWPPDAAVAAGRAR
Trigger: CCTCGCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGGCGCAGGGGCTGGGGCGCGCGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 90 bp AGGGGCGCCGCTGTGGGAAGGAGTCCGACCGACTGGCAGGACGCCTaGCACCGAGACCCCAAACTCTGGCGGCCCGCGCTTGCTCAGGCT +
Preference number: 1 (lower is better)
Translates to: RGAAVGRSPTDWQDA*HRDPKLWRPALAQA
Trigger: AGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTCGGTCGGACTCCTTCCCACAGCGGCGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp CGCGCCCCAGCCCCTGCGCCACCAGCTCCTCCCGAATCTTGGCGATaGCCGCCGGATGCTGCAGTAGCAGCAGGACGAGCGAGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: RAPAPAPPAPPESWR*PPDAAVAAGRARCW
Trigger: CCAGCACCTCGCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGGCGCAGGGGCTGGGGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp GCTGGAGGCGCCCCGGGAATCTTCGCGCGCTGCGCCGAAGCGCTCTaGATCGAAGCCTTCGGGAGGGCTGCGGTACACCGCAGCCGTCTC +
Preference number: 1 (lower is better)
Translates to: AGGAPGIFARCAEAL*IEAFGRAAVHRSRL
Trigger: GAGACGGCTGCGGTGTACCGCAGCCCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGCAGCGCGCGAAGATTCCCGGGGCGCCTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp GCCAGTTCCCAGCGCGCGGTGCGCACTAGCTCCACAGCTAGCAGCTaGAGCACGGCTTGCGCCAGCTCCTGGCCGAGGCAGCTGCGCGCA +
Preference number: 1 (lower is better)
Translates to: ASSQRAVRTSSTASS*STACASSWPRQLRA
Trigger: TGCGCGCAGCTGCCTCGGCCAGGAGCTGGCGCAAGCCGTGCTCCAGCTGCTAGCTGTGGAGCTAGTGCGCACCGCGCGCTGGGAACTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp GGGCTCATCTGCAGCCCTCACGCTCTCCTCGGTTCCGCAGCCATCTaGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGGGGCGCCGCT +
Preference number: 1 (lower is better)
Translates to: GLICSPHALLGSAAI*ASEEVMEAGPRGAA
Trigger: AGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGCGGAACCGAGGAGAGCGTGAGGGCTGCAGATGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 90 bp TCTGCATGGCGGGGAAGGCGGGTGTGGCCAGTTCCCAGCGCGCGGTaGGCACTAGCTCCACAGCTAGCAGCTGGAGCACGGCTTGCGCCA +
Preference number: 1 (lower is better)
Translates to: SAWRGRRVWPVPSAR*ALAPQLAAGARLAP
Trigger: TGGCGCAAGCCGTGCTCCAGCTGCTAGCTGTGGAGCTAGTGCGCACCGCGCGCTGGGAACTGGCCACACCCGCCTTCCCCGCCATGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 90 bp AAAAAGAGCCGCAGCCCGTCCACTGGGTGCACGATGGGCACCGTCTaGATGGCGGGGAAGGCGGGTGTGGCCAGTTCCCAGCGCGCGGTG +
Preference number: 1 (lower is better)
Translates to: KKSRSPSTGCTMGTV*MAGKAGVASSQRAV
Trigger: CACCGCGCGCTGGGAACTGGCCACACCCGCCTTCCCCGCCATGCAGACGGTGCCCATCGTGCACCCAGTGGACGGGCTGCGGCTCTTTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp CGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATaGGTGGCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGTGTC +
Preference number: 1 (lower is better)
Translates to: RVKEWARDATMGSGR*VALRARHSHRPSRV
Trigger: GACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 90 bp CAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTaGAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGT +
Preference number: 1 (lower is better)
Translates to: QARVAPTACPLPYKG*RSHRVRRVSAMSPS
Trigger: ACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 90 bp GATGTAATGGAAGCGGCTGGAGGCGCCCCGGGAATCTTCGCGCGCTaGGCCGAAGCGCTCTGGATCGAAGCCTTCGGGAGGGCTGCGGTA +
Preference number: 1 (lower is better)
Translates to: DVMEAAGGAPGIFAR*AEALWIEAFGRAAV
Trigger: TACCGCAGCCCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGCAGCGCGCGAAGATTCCCGGGGCGCCTCCAGCCGCTTCCATTACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 90 bp TCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGATaGTTCTCTGGCGCGGCAGCGGTGGCTCGCCCTCCTCCTTCCTCG +
Preference number: 1 (lower is better)
Translates to: SSGRGAQKASSHGLR*FSGAAAVARPPPSS
Trigger: CGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CCA 90 bp AGGCATCTTCCCATGGGCTTAGATGCTTCTCTGGCGCGGCAGCGGTaGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTT +
Preference number: 1 (lower is better)
Translates to: RHLPMGLDASLARQR*LALLLPRVRHTSAF
Trigger: AAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGGAAGATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 90 bp CCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTaGGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTC +
Preference number: 1 (lower is better)
Translates to: PRRARFLTRVAGPTA*VGSLQCPRVAIFPL
Trigger: GAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 90 bp TGTCCATGCCTGGCACAGAGCCCAGTGCGGCTAGGGTCAGCCCATTaGCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCAC +
Preference number: 1 (lower is better)
Translates to: CPCLAQSPVRLGSAH*PFPVLGSGWGTLMH
Trigger: GTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGGCAATGGGCTGACCCTAGCCGCACTGGGCTCTGTGCCAGGCATGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 90 bp TGGCCAGCAGAATCCGGTGACCTTGAGCCCTTTCGAGCCTGGAAGTaGCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAG +
Preference number: 1 (lower is better)
Translates to: WPAESGDLEPFRAWK*PQLLVSAETGRVAK
Trigger: CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGAAAGGGCTCAAGGTCACCGGATTCTGCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 90 bp GAGAGGTCAAGCAATTGCCCAGAGTCACACAGCTGTCCATGTCCATaGCTGGCACAGAGCCCAGTGCGGCTAGGGTCAGCCCATTGCCCT +
Preference number: 1 (lower is better)
Translates to: ERSSNCPESHSCPCP*LAQSPVRLGSAHCP
Trigger: AGGGCAATGGGCTGACCCTAGCCGCACTGGGCTCTGTGCCAGGCATGGACATGGACAGCTGTGTGACTCTGGGCAATTGCTTGACCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp GGGCATCCTAGCTGCTCTCCGGGTCCTGCCCATTGTTCTGAAGTCTaGAGAAGCAGCAGTTCTCTGATCCCGAAACCTAGCGGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: GHPSCSPGPAHCSEV*RSSSSLIPKPSGSR
Trigger: CCTGGACCCGCTAGGTTTCGGGATCAGAGAACTGCTGCTTCTCCAGACTTCAGAACAATGGGCAGGACCCGGAGAGCAGCTAGGATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp CAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTaGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: QAAPRGDLSIPSIPA*PTTFSFLWARSAEG
Trigger: GCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTaGTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGA +
Preference number: 1 (lower is better)
Translates to: KPSSTSWGSIYSLHS*LAHDIFLPLGAERR
Trigger: TCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR TCA 90 bp GTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTaGACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGG +
Preference number: 1 (lower is better)
Translates to: VRHTSAFGEHLLKDC*TSERVGARRYNGER
Trigger: CCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CCA 90 bp AGCTCCACAGCCGACTCCTTCAGTTCTCCTACTGACAAGGCTGGCTaGAGGCTGAAGGCTGCAGAGGTAGTGAGTGTGGCTGAGTCATTA +
Preference number: 1 (lower is better)
Translates to: SSTADSFSSPTDKAG*RLKAAEVVSVAESL
Trigger: TAATGACTCAGCCACACTCACTACCTCTGCAGCCTTCAGCCTCCAGCCAGCCTTGTCAGTAGGAGAACTGAAGGAGTCGGCTGTGGAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR TCA 90 bp CACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACGAGTaGAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGG +
Preference number: 1 (lower is better)
Translates to: HIRVWRTFVERLLNE*KSGRATLQWGAADG
Trigger: CCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR TCA 90 bp TCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTaGAAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACA +
Preference number: 1 (lower is better)
Translates to: SFLESGTHPRLANIC*KIVERVKEWARDAT
Trigger: TGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR TCA 90 bp CCTCTGAGCCACAGCAGAGTTACTGTCATCCTGAGGAGAGGATGCTaGAGTTCAGAGAGGTCAAGCAATTGCCCAGAGTCACACAGCTGT +
Preference number: 1 (lower is better)
Translates to: PLSHSRVTVILRRGC*SSERSSNCPESHSC
Trigger: ACAGCTGTGTGACTCTGGGCAATTGCTTGACCTCTCTGAACTTCAGCATCCTCTCCTCAGGATGACAGTAACTCTGCTGTGGCTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 90 bp GGATTTGTAAGCATTAGCCTCTGTAAGAGCGTGGGCAATAGGGGATaGCTCTCCAGAGTTCAGGGAATAGCCGCAGCAAAAGCATTCCCC +
Preference number: 1 (lower is better)
Translates to: GFVSISLCKSVGNRG*LSRVQGIAAAKAFP
Trigger: GGGGAATGCTTTTGCTGCGGCTATTCCCTGAACTCTGGAGAGGCATCCCCTATTGCCCACGCTCTTACAGAGGCTAATGCTTACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp ATCCTTGTGTTAACAGCTTCCCAGCTTAGCTCCTGGCCTGGCATATaGCTGGGCTCAGTAAATGGTCGGGGATATGTCCACTGTCCACAA +
Preference number: 1 (lower is better)
Translates to: ILVLTASQLSSWPGI*LGSVNGRGYVHCPQ
Trigger: TTGTGGACAGTGGACATATCCCCGACCATTTACTGAGCCCAGCCATATGCCAGGCCAGGAGCTAAGCTGGGAAGCTGTTAACACAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 90 bp ACCTCTCTAATTATGTCTCAACCTCCCATGAAAATAATCCAGCGTTaGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATGACAAG +
Preference number: 1 (lower is better)
Translates to: TSLIMSQPPMKIIQR*RRVGVPILLCIHDK
Trigger: CTTGTCATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCATGGGAGGTTGAGACATAATTAGAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR CCA 90 bp AGACGGCCCAGCGCCGCGAGGCTGAGGTCGGGCTCGCAGCCGCAGTCGGGCGGGCGAGACCCCAAACTCTaGCGGCCCGCGCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: RRPSAARLRSGSQPQSGGRDPKL*RPALAQ
Trigger: CTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTCTCG...CCCGCCCGACTGCGGCTGCGAGCCCGACCTCAGCCTCGCGGCGCTGGGCCGTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CAA 90 bp CCGCACGCGCGCCCCAGCCCCTGCGCCACCAGCTCCTCCCGAATCTaGGCGATGGCCGCCGGATGCTGCAGTAGCAGCAGGACGAGCGAG +
Preference number: 2 (lower is better)
Translates to: PHARPSPCATSSSRI*AMAAGCCSSSRTSE
Trigger: CTCGCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGGCGCAGGGGCTGGGGCGCGCGTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp AGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGCGCGCTTGCTCAGGCTaGAGCGCGTCGCGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: SGGSPSSFLESGTHPRLARACSG*SASRQA
Trigger: CGCCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCG...CGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR TCA 90 bp CACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTCAGGGCTGGTGGAGCTaGCGCCCACACCCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: HGVPASLQGLQVPPRASGQGWWS*RPHPWV
Trigger: GACCCAGGGGTGTGGGCGTCAGCTCCACCAGCCCTG...ACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CAA 90 bp CCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTaGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAG +
Preference number: 2 (lower is better)
Translates to: PGQGCAHGVPASLQG*QVPPRASGLCNVPE
Trigger: CTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR TCA 90 bp CACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGCGTGGGGCTTCCGAAGAGGTaGTGGAGGCCGGCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: HEARRQLPEGLPSGILCVGLPKR*WRPAPG
Trigger: CCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCC...CACGCAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR GCA 90 bp GCGGCAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTAGCCTTCGGGAGGGCTaGGGTACACCGCAGCCGTCT +
Preference number: 2 (lower is better)
Translates to: AAAVARPPPSSSPAHIRVSLREG*GTPQPS
Trigger: AGACGGCTGCGGTGTACCGCAGCCCTCCCGAAGGCT...AACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR GCA 90 bp GCGGCAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTACGATGGGCACCGTCTaGATGGCGGGGAAGGCGGGT +
Preference number: 2 (lower is better)
Translates to: AAAVARPPPSSSPAHIRVTMGTV*MAGKAG
Trigger: ACCCGCCTTCCCCGCCATGCAGACGGTGCCCATCGT...AACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp AGACGGCCCAGCGCCGCGAGGCTGAGGTCGGGCTCGCAGCCGCAGTCGGGCGGGTCCTGGCCTGGCATATaGCTGGGCTCAGTAAATGGT +
Preference number: 2 (lower is better)
Translates to: RRPSAARLRSGSQPQSGGSWPGI*LGSVNG
Trigger: ACCATTTACTGAGCCCAGCCATATGCCAGGCCAGGA...CCCGCCCGACTGCGGCTGCGAGCCCGACCTCAGCCTCGCGGCGCTGGGCCGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR GCA 90 bp CCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCAGCCCGTCCACTGGGTaGACGATGGGCACCGTCTGC +
Preference number: 2 (lower is better)
Translates to: PGQGCAHGVPASLQGLQVSPSTG*TMGTVC
Trigger: GCAGACGGTGCCCATCGTGCACCCAGTGGACGGGCT...GACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp GCGCAGCACCTCCTTGACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCGTACTAGGCTCAGGCTaGGGTACCTTGATGCACCCA +
Preference number: 2 (lower is better)
Translates to: AQHLLDHAVDVAQTAQRRVLGSG*GTLMHP
Trigger: TGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTAC...GCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp CCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTGGGCTGGCGCTGGGCTaGACCGGGGCTCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: PFPCTRLRLGYLDAPSKAGLALG*TGAHLQ
Trigger: CTGCAGATGAGCCCCGGTCCAGCCCAGCGCCAGCCC...AGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp CGGCCAAGCCGTGTCCTAGAGCGCAAGCATGTCAGAGGCATAGCCCATTCCCCGTCACGCTCCAGCCCTTaGGGATCTGGTAGCCGTCGA +
Preference number: 2 (lower is better)
Translates to: RPSRVLERKHVRGIAHSPSRSSP*GSGSRR
Trigger: TCGACGGCTACCAGATCCCCAAGGGCTGGAGCGTGA...CGGGGAATGGGCTATGCCTCTGACATGCTTGCGCTCTAGGACACGGCTTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CAA 90 bp GAATCCGGTGACCTTGAGCCCTTTCGAGCCTGGAAGTGCCCACAGTaGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACGAA +
Preference number: 2 (lower is better)
Translates to: ESGDLEPFRAWKCPQ*LVSAETGRVAKAHE
Trigger: TTCGTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGAAAGGGCTCAAGGTCACCGGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR CCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTGTCCGGGGCTGGCGCTaGGCTGGACCGGGGCTCATC +
Preference number: 2 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFVRGWR*AGPGLI
Trigger: GATGAGCCCCGGTCCAGCCCAGCGCCAGCCCCGGAC...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp TCTATGGCCCAAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACCCCTCCATTCCTGCTTaGCCCACGACATTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: SMAQSQARVAPTACPLPYPSIPA*PTTFSF
Trigger: GAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGG...GTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTTGGGCCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CAA 90 bp ATGTCCATGCCTGGCACAGAGCCCAGTGCGGCTAGGGTCAGCCCATaGCCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCA +
Preference number: 2 (lower is better)
Translates to: MSMPGTEPSAARVSP*PFPCTRLRLGYLDA
Trigger: TGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGGCAATGGGCTGACCCTAGCCGCACTGGGCTCTGTGCCAGGCATGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR TCA 90 bp AAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCATCCTGCCCATTGTTCTaGAGTCTGGAGAAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: KARPGLRPRRARFLTRVASCPLF*SLEKQQ
Trigger: CTGCTGCTTCTCCAGACTTCAGAACAATGGGCAGGA...TGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR GCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCGACTGGCAGGACGCCTaGCACCGAGACCCCAAACTC +
Preference number: 2 (lower is better)
Translates to: KIVERVKEWARDATMGSGDWQDA*HRDPKL
Trigger: GAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTC...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR GCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCATGGCCGCCGGATGCTaGAGTAGCAGCAGGACGAGC +
Preference number: 2 (lower is better)
Translates to: KIVERVKEWARDATMGSGMAAGC*SSSRTS
Trigger: GCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCAT...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp AGCATTGGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTGGCTCTGCCAACACCAGGGGCGCCGCTGTaGGAAGGAGTCCGACCGACT +
Preference number: 2 (lower is better)
Translates to: SIGVGTCQKTFSALALPTPGAPL*EGVRPT
Trigger: AGTCGGTCGGACTCCTTCCCACAGCGGCGCCCCTGG...TGTTGGCAGAGCCAGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACCAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp AGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCAAACCTTCTCAGCACTaGCTCTGCCAACATCCTTGT +
Preference number: 2 (lower is better)
Translates to: RPGLRPRRARFLTRVAGPKPSQH*LCQHPC
Trigger: ACAAGGATGTTGGCAGAGCCAGTGCTGAGAAGGTTT...GGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp GCATGTCAGAGGCATAGCCCATTCCCCGCAACCGAAGGCGTGAGGGGGTGGAAATGTAATGGAAGCGGCTaGAGGCGCCCCGGGAATCTT +
Preference number: 2 (lower is better)
Translates to: ACQRHSPFPATEGVRGWKCNGSG*RRPGNL
Trigger: AAGATTCCCGGGGCGCCTCCAGCCGCTTCCATTACA...TTTCCACCCCCTCACGCCTTCGGTTGCGGGGAATGGGCTATGCCTCTGACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CAA 90 bp CCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTaGGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: PSSTSWGSIYSLHSC*AHDIFLPLGAERRR
Trigger: CCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR GCA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCGTTCCCAGCGCGCGGTaGGCACTAGCTCCACAGCTA +
Preference number: 2 (lower is better)
Translates to: KPSSTSWGSIYSLHSCLAVPSAR*ALAPQL
Trigger: TAGCTGTGGAGCTAGTGCGCACCGCGCGCTGGGAAC...GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR GCA 90 bp CTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGATCCCATGGGCTTAGATaGTTCTCTGGCGCGGCAGCG +
Preference number: 2 (lower is better)
Translates to: LFPPFLLGPRHFPSSGRGSHGLR*FSGAAA
Trigger: CGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGGA...TCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR CCA 90 bp GCATGTCAGAGGCATAGCCCATTCCCCGCAACCGAAGGCGTGAGGGGGTGGAAACTGGGGATGCAGCATTaGTGTAGGGACCTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: ACQRHSPFPATEGVRGWKLGMQH*CRDLPE
Trigger: TTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAG...TTTCCACCCCCTCACGCCTTCGGTTGCGGGGAATGGGCTATGCCTCTGACATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp CCACCAGCTCCTCCCGAATCTTGGCGATGGCCGCCGGATGCTGCAGTAGCAGCATGGCTGAGTCATTACTaGAACCCAGGTCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: PPAPPESWRWPPDAAVAAWLSHY*NPGLLL
Trigger: CAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCA...TGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp GGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCAGGAGTCCGACCGACTaGCAGGACGCCTGCCACCGA +
Preference number: 2 (lower is better)
Translates to: GDLSIPSIPAWPTTFSFLRSPTD*QDACHR
Trigger: TCGGTGGCAGGCGTCCTGCCAGTCGGTCGGACTCCT...GAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR TCA 90 bp CCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTCTGACTGAAGCAGCAGTTCTCTaGTCCCGAAACCTAGCGGGT +
Preference number: 2 (lower is better)
Translates to: PCTRLRLGYLDAPSKALTEAAVL*SRNLAG
Trigger: ACCCGCTAGGTTTCGGGATCAGAGAACTGCTGCTTC...AGTCAGAGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR TCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTTGGCACTGGCCGTGGTaGAGAAGGCGGCGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFWHWPW*RRRRRG
Trigger: TCCTCTTCGCCGCCTTCTTCACCACGGCCAGTGCCA...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTGCTCCTCCCGAATCTTaGCGATGGCCGCCGGATGCT +
Preference number: 2 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFAPPES*RWPPDA
Trigger: AGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGC...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp CTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGAACGAGTGAAAGAGTaGGCGCGCGACGCTACAATG +
Preference number: 2 (lower is better)
Translates to: LFPPFLLGPRHFPSSGRGERVKE*ARDATM
Trigger: CATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTC...TCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR TCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCGGTAGTGAGTGTGGCTaGGTCATTACTGGAACCCAG +
Preference number: 2 (lower is better)
Translates to: KIVERVKEWARDATMGSGGSECG*VITGTQ
Trigger: CTGGGTTCCAGTAATGACTCAGCCACACTCACTACC...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR GCA 90 bp GGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATTCTCAGCACTGGCTCTaGCAACATCCTTGTGTTAAC +
Preference number: 2 (lower is better)
Translates to: GPRHFPSSGRGAQKASSHSQHWL*QHPCVN
Trigger: GTTAACACAAGGATGTTGGCAGAGCCAGTGCTGAGA...ATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp GTGGCTGAGTCATTACTGGAACCCAGGTCTCCTCTTGCCCCTCATCTTGAGGACGCCTCTGTAAGAGCGTaGGCAATAGGGGATGCCTCT +
Preference number: 2 (lower is better)
Translates to: VAESLLEPRSPLAPHLEDASVRA*AIGDAS
Trigger: AGAGGCATCCCCTATTGCCCACGCTCTTACAGAGGC...GTCCTCAAGATGAGGGGCAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTGGTTCCGCAGCCATCTaGGCTTCCGAAGAGGTGATG +
Preference number: 2 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFGSAAI*ASEEVM
Trigger: CATCACCTCTTCGGAAGCCCAGATGGCTGCGGAACC...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR TCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTAGATTGTTGAACGAGTaGAAGAGTGGGCGCGCGACG +
Preference number: 2 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFRLLNE*KSGRAT
Trigger: CGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCT...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 72 bp CTGCCACCGAGACCCCAAACTCTGGCGGCCCGCGCTTaGTCAGGCTGGAGCGCGTCGCGGCAGGCGCGTCCC +
Preference number: 3 (lower is better)
Translates to: LPPRPQTLAARA*SGWSASRQARP
Trigger: GGGACGCGCCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTCTCGGTGGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp GGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTaGCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCC +
Preference number: 3 (lower is better)
Translates to: GRATLQWGAADG*RCVRAIATGQA
Trigger: GGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR TCA 72 bp CCCCGGACACTGGCGGCAGGAGGCGCAGCACCTCCTTaGCCACGCAGTCGACGTAGCGCAGACGGCCCAGCG +
Preference number: 3 (lower is better)
Translates to: PRTLAAGGAAPP*PRSRRSADGPA
Trigger: CGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGCCTCCTGCCGCCAGTGTCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp GACTGGCAGGACGCCTGCCACCGAGACCCCAAACTCTaGCGGCCCGCGCTTGCTCAGGCTGGAGCGCGTCGC +
Preference number: 3 (lower is better)
Translates to: DWQDACHRDPKL*RPALAQAGARR
Trigger: GCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp GAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATaGGTGGCGCTGCGTGCGCGCCATAGCCACCGGCCA +
Preference number: 3 (lower is better)
Translates to: EWARDATMGSGR*VALRARHSHRP
Trigger: TGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 72 bp GAAGCGGCTGGAGGCGCCCCGGGAATCTTCGCGCGCTaGGCCGAAGCGCTCTGGATCGAAGCCTTCGGGAGG +
Preference number: 3 (lower is better)
Translates to: EAAGGAPGIFAR*AEALWIEAFGR
Trigger: CCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGCAGCGCGCGAAGATTCCCGGGGCGCCTCCAGCCGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp CGCACTAGCTCCACAGCTAGCAGCTGGAGCACGGCTTaGGCCAGCTCCTGGCCGAGGCAGCTGCGCGCACCG +
Preference number: 3 (lower is better)
Translates to: RTSSTASSWSTA*ASSWPRQLRAP
Trigger: CGGTGCGCGCAGCTGCCTCGGCCAGGAGCTGGCGCAAGCCGTGCTCCAGCTGCTAGCTGTGGAGCTAGTGCG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp CGGGGAAGGCGGGTGTGGCCAGTTCCCAGCGCGCGGTaGGCACTAGCTCCACAGCTAGCAGCTGGAGCACGG +
Preference number: 3 (lower is better)
Translates to: RGRRVWPVPSAR*ALAPQLAAGAR
Trigger: CCGTGCTCCAGCTGCTAGCTGTGGAGCTAGTGCGCACCGCGCGCTGGGAACTGGCCACACCCGCCTTCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp GCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTaGGTGCGCGCCATAGCCACCGGCCAAGCCGTGTCC +
Preference number: 3 (lower is better)
Translates to: ATLQWGAADGWR*VRAIATGQAVS
Trigger: GGACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CCA 72 bp CCCAGGGGCGCCGCTGTGGGAAGGAGTCCGACCGACTaGCAGGACGCCTGCCACCGAGACCCCAAACTCTGG +
Preference number: 3 (lower is better)
Translates to: PRGAAVGRSPTD*QDACHRDPKLW
Trigger: CCAGAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTCGGTCGGACTCCTTCCCACAGCGGCGCCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp GCCCCGGGAATCTTCGCGCGCTGCGCCGAAGCGCTCTaGATCGAAGCCTTCGGGAGGGCTGCGGTACACCGC +
Preference number: 3 (lower is better)
Translates to: APGIFARCAEAL*IEAFGRAAVHR
Trigger: GCGGTGTACCGCAGCCCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGCAGCGCGCGAAGATTCCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR TCA 72 bp TCCTCGGTTCCGCAGCCATCTGGGCTTCCGAAGAGGTaGTGGAGGCCGGCCCCAGGGGCGCCGCTGTGGGAA +
Preference number: 3 (lower is better)
Translates to: SSVPQPSGLPKR*WRPAPGAPLWE
Trigger: TTCCCACAGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGCGGAACCGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp GCTGTGGGAAGGAGTCCGACCGACTGGCAGGACGCCTaGCACCGAGACCCCAAACTCTGGCGGCCCGCGCTT +
Preference number: 3 (lower is better)
Translates to: AVGRSPTDWQDA*HRDPKLWRPAL
Trigger: AAGCGCGGGCCGCCAGAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTCGGTCGGACTCCTTCCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp CGCCGAAGCGCTCTGGATCGAAGCCTTCGGGAGGGCTaGGGTACACCGCAGCCGTCTCGTGCGTGTCCCGGA +
Preference number: 3 (lower is better)
Translates to: RRSALDRSLREG*GTPQPSRACPG
Trigger: TCCGGGACACGCACGAGACGGCTGCGGTGTACCGCAGCCCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp GCCCCTGCGCCACCAGCTCCTCCCGAATCTTGGCGATaGCCGCCGGATGCTGCAGTAGCAGCAGGACGAGCG +
Preference number: 3 (lower is better)
Translates to: APAPPAPPESWR*PPDAAVAAGRA
Trigger: CGCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGGCGCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp ATGGCCCAAAGCCAGGCCAGGGTTGCGCCCACGGCGTaGCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGC +
Preference number: 3 (lower is better)
Translates to: MAQSQARVAPTA*PLPYKGCRSHR
Trigger: GCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTTGGGCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CCA 72 bp TGCAGCCCTCACGCTCTCCTCGGTTCCGCAGCCATCTaGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: CSPHALLGSAAI*ASEEVMEAGPR
Trigger: CCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGCGGAACCGAGGAGAGCGTGAGGGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp GGAAAAAGAGCCGCAGCCCGTCCACTGGGTGCACGATaGGCACCGTCTGCATGGCGGGGAAGGCGGGTGTGG +
Preference number: 3 (lower is better)
Translates to: GKRAAARPLGAR*APSAWRGRRVW
Trigger: CCACACCCGCCTTCCCCGCCATGCAGACGGTGCCCATCGTGCACCCAGTGGACGGGCTGCGGCTCTTTTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp GTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTaGAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATG +
Preference number: 3 (lower is better)
Translates to: VAPTACPLPYKG*RSHRVRRVSAM
Trigger: CATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR CAA 90 bp GACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCGAGGCTGAGGTCGGGAGAGAGGTCAAGCAATaGCCCAGAGTCACACAGCTG +
Preference number: 3 (lower is better)
Translates to: DHAVDVAQTAQRREAEVGREVKQ*PRVTQL
Trigger: CAGCTGTGTGACTCTGGGCAATTGCTTGACCTCTCT...CCCGACCTCAGCCTCGCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp AGCTCCTCCCGAATCTTGGCGATGGCCGCCGGATGCTaGAGTAGCAGCAGGACGAGCGAGGTGCTGGCACTG +
Preference number: 3 (lower is better)
Translates to: SSSRILAMAAGC*SSSRTSEVLAL
Trigger: CAGTGCCAGCACCTCGCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp ACCAGCTCCTCCCGAATCTTGGCGATGGCCGCCGGATaGTGCAGTAGCAGCAGGACGAGCGAGGTGCTGGCA +
Preference number: 3 (lower is better)
Translates to: TSSSRILAMAAG*CSSSRTSEVLA
Trigger: TGCCAGCACCTCGCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp CTGGCACAGAGCCCAGTGCGGCTAGGGTCAGCCCATTaGCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACC +
Preference number: 3 (lower is better)
Translates to: LAQSPVRLGSAH*PFPVLGSGWGT
Trigger: GGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGGCAATGGGCTGACCCTAGCCGCACTGGGCTCTGTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CAA 90 bp TCTATGGCCCAAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAACCCAGGTCTCCTCTaGCCCCTCATCTTGAGGACT +
Preference number: 3 (lower is better)
Translates to: SMAQSQARVAPTACPLPYNPGLL*PLILRT
Trigger: AGTCCTCAAGATGAGGGGCAAGAGGAGACCTGGGTT...GTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTTGGGCCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR-3UTR CAA 90 bp GGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCTCTGGCGGCCCGCGCTaGCTCAGGCTGGAGCGCGTC +
Preference number: 3 (lower is better)
Translates to: GDLSIPSIPAWPTTFSFLSGGPR*LRLERV
Trigger: GACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGA...GAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp CAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTaGAATGTCCCCGAGTTGCAATATTCCCACTCCCCT +
Preference number: 3 (lower is better)
Translates to: QGLQVPPRASGL*NVPELQYSHSP
Trigger: AGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 72 bp GCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTaGGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATA +
Preference number: 3 (lower is better)
Translates to: ARFLTRVAGPTA*VGSLQCPRVAI
Trigger: TATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR GCA 72 bp GAATCCGGTGACCTTGAGCCCTTTCGAGCCTGGAAGTaGCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGA +
Preference number: 3 (lower is better)
Translates to: ESGDLEPFRAWK*PQLLVSAETGR
Trigger: TCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGAAAGGGCTCAAGGTCACCGGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR CAA 90 bp GTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATCCCTCCATTCCTGCTaGGCCCACGACATTTTCCTT +
Preference number: 3 (lower is better)
Translates to: VAGPTACVGSLQCPRVAISLHSC*AHDIFL
Trigger: AAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGA...TATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR TCA 72 bp CTGGAGGCTGAAGGCTGCAGAGGTAGTGAGTGTGGCTaGGTCATTACTGGAACCCAGGTCTCCTCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: LEAEGCRGSECG*VITGTQVSSCP
Trigger: GGGGCAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCACACTCACTACCTCTGCAGCCTTCAGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp TTGCCCCTCATCTTGAGGACTGCCTGTGCCTCAAAGTaGGGCCACACAAGATGTGGCTCTGGGGATGCAGCA +
Preference number: 3 (lower is better)
Translates to: LPLILRTACASK*GHTRCGSGDAA
Trigger: TGCTGCATCCCCAGAGCCACATCTTGTGTGGCCCCACTTTGAGGCACAGGCAGTCCTCAAGATGAGGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CCA 72 bp CCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTaGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGC +
Preference number: 3 (lower is better)
Translates to: PRGDLSIPSIPA*PTTFSFLWARS
Trigger: GCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CCA 72 bp GATTGGCTCGGGAAGGGGAAGCCAAGCAGCACCTCGTaGGGATCTATCTATTCCCTCCATTCCTGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: DWLGKGKPSSTS*GSIYSLHSCLA
Trigger: GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTTCCCCTTCCCGAGCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR-3UTR CAA 90 bp CCACCAGCTCCTCCCGAATCTTGGCGATGGCCGCCGGATGCTGCAGTAGCAGCAACTGTAATTCAGCACTaGAGTTCCATAGTCGGAGGA +
Preference number: 3 (lower is better)
Translates to: PPAPPESWRWPPDAAVAATVIQH*SSIVGG
Trigger: TCCTCCGACTATGGAACTCAAGTGCTGAATTACAGT...TGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR TCA 72 bp CCCATTGTTCTGAAGTCTGGAGAAGCAGCAGTTCTCTaGTCCCGAAACCTAGCGGGTCCAGGGCTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: PIVLKSGEAAVL*SRNLAGPGLVE
Trigger: CTCCACCAGCCCTGGACCCGCTAGGTTTCGGGATCAGAGAACTGCTGCTTCTCCAGACTTCAGAACAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp AGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTaGTTGGCCCACGACATTTTCCTTCCTCTGGGCGCG +
Preference number: 3 (lower is better)
Translates to: STSWGSIYSLHS*LAHDIFLPLGA
Trigger: CGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CCA 72 bp TTAACAGCTTCCCAGCTTAGCTCCTGGCCTGGCATATaGCTGGGCTCAGTAAATGGTCGGGGATATGTCCAC +
Preference number: 3 (lower is better)
Translates to: LTASQLSSWPGI*LGSVNGRGYVH
Trigger: GTGGACATATCCCCGACCATTTACTGAGCCCAGCCATATGCCAGGCCAGGAGCTAAGCTGGGAAGCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR GCA 72 bp AGCATTAGCCTCTGTAAGAGCGTGGGCAATAGGGGATaGCTCTCCAGAGTTCAGGGAATAGCCGCAGCAAAA +
Preference number: 3 (lower is better)
Translates to: SISLCKSVGNRG*LSRVQGIAAAK
Trigger: TTTTGCTGCGGCTATTCCCTGAACTCTGGAGAGGCATCCCCTATTGCCCACGCTCTTACAGAGGCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR TCA 72 bp GTTTGGCGAACATTTGTTGAAAGATTGTTGAACGAGTaGAAGAGTGGGCGCGCGACGCTACAATGGGGAGCG +
Preference number: 3 (lower is better)
Translates to: VWRTFVERLLNE*KSGRATLQWGA
Trigger: CGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTTTCAACAAATGTTCGCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR TCA 72 bp CACAGCAGAGTTACTGTCATCCTGAGGAGAGGATGCTaGAGTTCAGAGAGGTCAAGCAATTGCCCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: HSRVTVILRRGC*SSERSSNCPES
Trigger: TGACTCTGGGCAATTGCTTGACCTCTCTGAACTTCAGCATCCTCTCCTCAGGATGACAGTAACTCTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR TCA 72 bp ACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTaGACGAGTGAAAGAGTGGGCGCGCGACGCTACAAT +
Preference number: 3 (lower is better)
Translates to: TSAFGEHLLKDC*TSERVGARRYN
Trigger: ATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CCA 72 bp ATTATGTCTCAACCTCCCATGAAAATAATCCAGCGTTaGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATA +
Preference number: 3 (lower is better)
Translates to: IMSQPPMKIIQR*RRVGVPILLCI
Trigger: TATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCATGGGAGGTTGAGACATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCGCAGACGGCCCAGCGCCGCGAGGCTGAGGTCGGGCTCGCAGCCGCAGTCGGGCGCGCTTGCTCAGGCTaGAGCGCGTCGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: AQTAQRREAEVGLAAAVGRACSG*SASRQA
Trigger: CGCCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCG...CCCGACTGCGGCTGCGAGCCCGACCTCAGCCTCGCGGCGCTGGGCCGTCTGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
3UTR CAA 72 bp CCTGCCACCGAGACCCCAAACTCTGGCGGCCCGCGCTaGCTCAGGCTGGAGCGCGTCGCGGCAGGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PATETPNSGGPR*LRLERVAAGAS
Trigger: GGACGCGCCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTCTCGGTGGCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GGGGCTGGCGCTGGGCTGGACCGGGGCTCATCTGCAGCCCTCACGCTCTCCTCGCGGGGAAGGCGGGTGTaGCCAGTTCCCAGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GAGAGLDRGSSAALTLSSRGRRV*PVPSAR
Trigger: CCGCGCGCTGGGAACTGGCCACACCCGCCTTCCCCG...CGAGGAGAGCGTGAGGGCTGCAGATGAGCCCCGGTCCAGCCCAGCGCCAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp TGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGCCAGCGTGGCGCACTaGGCCTCGTCCAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: WGAADGWRCVRAIATGQAASVAH*ASSSRN
Trigger: GTTGCGGCTGGACGAGGCGCAGTGCGCCACGCTGGC...GGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GACCCCAAACTCTGGCGGCCCGCGCTTGCTCAGGCTGGAGCGCGTCGCGGCAGGAAGCCAGGCCAGGGTTaGGCCCACGGCGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: DPKLWRPALAQAGARRGRKPGQG*AHGVPA
Trigger: AGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTT...CCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp TGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGCTTGCGCCAGCTCCTaGCCGAGGCAGCTGCGCGCA +
Preference number: 4 (lower is better)
Translates to: WGAADGWRCVRAIATGQAACASS*PRQLRA
Trigger: TGCGCGCAGCTGCCTCGGCCAGGAGCTGGCGCAAGC...GGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCAGCCATCTGGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGGGGCGCCGCTGCACTCTGCGGCCACTaGCTGCGCACCAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: AAIWASEEVMEAGPRGAAALCGH*LRTRRC
Trigger: GCACCGCCTGGTGCGCAGCCAGTGGCCGCAGAGTGC...AGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GCGCAGCACCTCCTTGACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCATGGGGAGCGGCAGATaGGTGGCGCTGCGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: AQHLLDHAVDVAQTAQRRMGSGR*VALRAR
Trigger: GCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCAT...GCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GGCGCACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGGGTGCTGGGCCAGGCTaGGCAGCAGGCCCGCGCACA +
Preference number: 4 (lower is better)
Translates to: GARSQTPAARGPSVRHPLGAGPG*AAGPRT
Trigger: TGTGCGCGGGCCTGCTGCTCAGCCTGGCCCAGCACC...CAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGTGTCCTAGAGCGCAAGCATCTGGCGGCCCGCGCTTaGTCAGGCTGGAGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: ALRARHSHRPSRVLERKHLAARA*SGWSAS
Trigger: CGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAG...ATGCTTGCGCTCTAGGACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GGGGCTGGCGCTGGGCTGGACCGGGGCTCATCTGCAGCCCTCACGCTCTCCTCGAGCCTTCGGGAGGGCTaGGGTACACCGCAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GAGAGLDRGSSAALTLSSSLREG*GTPQPS
Trigger: AGACGGCTGCGGTGTACCGCAGCCCTCCCGAAGGCT...CGAGGAGAGCGTGAGGGCTGCAGATGAGCCCCGGTCCAGCCCAGCGCCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GCAGCCATCTGGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGGGGCGCCGCTAGCTGGAGCACGGCTTaGGCCAGCTCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AAIWASEEVMEAGPRGAASWSTA*ASSWPR
Trigger: CCTCGGCCAGGAGCTGGCGCAAGCCGTGCTCCAGCT...AGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GACCCCAAACTCTGGCGGCCCGCGCTTGCTCAGGCTGGAGCGCGTCGCGGCAGGCGCGCGACGCTACAATaGGGAGCGGCAGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: DPKLWRPALAQAGARRGRRATLQ*GAADGW
Trigger: CCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCG...CCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp CCCATGGGCTTAGATGCTTCTCTGGCGCGGCAGCGGTGGCTCGCCCTCCTCCTTGGTGCTGGGCCAGGCTaGGCAGCAGGCCCGCGCACA +
Preference number: 4 (lower is better)
Translates to: PMGLDASLARQRWLALLLGAGPG*AAGPRT
Trigger: TGTGCGCGGGCCTGCTGCTCAGCCTGGCCCAGCACC...AAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GACCCCAAACTCTGGCGGCCCGCGCTTGCTCAGGCTGGAGCGCGTCGCGGCAGGAGTCCCTCTCGAAGGTaGCTGCTGCCTCGGGAACGC +
Preference number: 4 (lower is better)
Translates to: DPKLWRPALAQAGARRGRSPSRR*LLPRER
Trigger: GCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACT...CCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCGCAACCCCAGCAGGATaGGCGCGGCCATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RDATMGSGRWVALRARHSATPAG*ARPCGR
Trigger: CCTTCCGCATGGCCGCGCGCATCCTGCTGGGGTTGC...GCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCAGCCATCTGGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGGGGCGCCGCTAGCCCGTCCACTGGGTaGACGATGGGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: AAIWASEEVMEAGPRGAASPSTG*TMGTVC
Trigger: GCAGACGGTGCCCATCGTGCACCCAGTGGACGGGCT...AGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCAAGCCAGGCCAGGGTTaGGCCCACGGCGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: QRWLALLLPRVRHTSAFGKPGQG*AHGVPA
Trigger: AGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTT...GCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGGCAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTCCCTCCAGGTGCCGATaGAGCTGGTCCCTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AAAVARPPPSSSPAHIRVPSRCR*SWSLAR
Trigger: CCGGGCAAGGGACCAGCTGCATCGGCACCTGGAGGG...AACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CCA 90 bp GCGCAGCACCTCCTTGACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCCGAGACCCCAAACTCTaGCGGCCCGCGCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQHLLDHAVDVAQTAQRRRDPKL*RPALAQ
Trigger: CTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTCTCG...GCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp AGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCGCTTGCGCCAGCTCCTaGCCGAGGCAGCTGCGCGCA +
Preference number: 4 (lower is better)
Translates to: RPGLRPRRARFLTRVAGPACASS*PRQLRA
Trigger: TGCGCGCAGCTGCCTCGGCCAGGAGCTGGCGCAAGC...GGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCGCAGCACCTCCTTGACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCCCGAGACCGGCAGAGTaGCCAAGGCGCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: AQHLLDHAVDVAQTAQRRPRPAE*PRRTKP
Trigger: TGGCTTCGTGCGCCTTGGCCACTCTGCCGGTCTCGG...GCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATCCGAGACCGGCAGAGTaGCCAAGGCGCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ARDATMGSGRWVALRARHPRPAE*PRRTKP
Trigger: TGGCTTCGTGCGCCTTGGCCACTCTGCCGGTCTCGG...ATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp TCGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCCAGCGCGGCGCGGCTaGACACGCGCGCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: SSLEVPTVASFRRDRQSGPARRG*TRAPGP
Trigger: AGGTCCTGGCGCGCGTGTTCAGCCGCGCCGCGCTGG...GCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp CATCTGCAGCCCTCACGCTCTCCTCGGTTCCGCAGCCATCTGGGCTTCCGAAGAGGAGGCGTCGTAGACTaGGACCGGCCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HLQPSRSPRFRSHLGFRRGGVVD*DRPARR
Trigger: GCGGCGGGCGGGCCGGTCTCAGTCTACGACGCCTCC...TCTTCGGAAGCCCAGATGGCTGCGGAACCGAGGAGAGCGTGAGGGCTGCAGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGGCGAGCAGTGCGCAGTaGTCACCTGTTCCGTCCGCA +
Preference number: 4 (lower is better)
Translates to: EWARDATMGSGRWVALRAASSAQ*SPVPSA
Trigger: TGCGGACGGAACAGGTGAGCACTGCGCACTGCTCGC...CGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp TCTATGGCCCAAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACCGCACAGGAGAGCAGTaGCCGCCGCCCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SMAQSQARVAPTACPLPYRTGEQ*PPPPAL
Trigger: CAGTGCTGGGGGCGGCGGGCACTGCTCTCCTGTGCG...GTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTTGGGCCATAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCAGCCATCTGGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGGGGCGCCGCTGACTGGCAGGACGCCTaGCACCGAGACCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: AAIWASEEVMEAGPRGAADWQDA*HRDPKL
Trigger: GAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTC...AGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATATGGCCGCCGGATGCTaGAGTAGCAGCAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: ARDATMGSGRWVALRARHMAAGC*SSSRTS
Trigger: GCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCAT...ATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CCCATGGGCTTAGATGCTTCTCTGGCGCGGCAGCGGTGGCTCGCCCTCCTCCTTAGGTGCGCAGGGCGGTaGGGTAGCCCCCGGACACTG +
Preference number: 4 (lower is better)
Translates to: PMGLDASLARQRWLALLLRCAGR*GSPRTL
Trigger: CAGTGTCCGGGGGCTACCGCACCGCCCTGCGCACCT...AAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGGCAGATGGGTGGCGCTaGGTGCGCGCCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: SGGSPSSFLESGTHPRLAADGWR*VRAIAT
Trigger: GGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGC...CGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GACCCCAAACTCTGGCGGCCCGCGCTTGCTCAGGCTGGAGCGCGTCGCGGCAGGTCACGCTCCAGCCCTTaGGGATCTGGTAGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: DPKLWRPALAQAGARRGRSRSSP*GSGSRR
Trigger: TCGACGGCTACCAGATCCCCAAGGGCTGGAGCGTGA...CCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACGTTGCCAACCTGGTCTaGAGACCCCCGCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: ARVAPTACPLPYKGCRSHVANLV*RPPPHL
Trigger: CAGGTGGGGCGGGGGTCTGCAGACCAGGTTGGCAAC...GTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTAGGATGTGCGCACTCTaGGGCCACTGGCTGCGCACC +
Preference number: 4 (lower is better)
Translates to: HGVPASLQGLQVPPRASGRMCAL*GHWLRT
Trigger: GGTGCGCAGCCAGTGGCCGCAGAGTGCGCACATCCT...ACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTGCGATGGCCGCCGGATaGTGCAGTAGCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: HGVPASLQGLQVPPRASGAMAAG*CSSSRT
Trigger: CGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGC...ACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGGCAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTGTTGCGCCCACGGCGTaGCCGCTTCCTTACAAGGGT +
Preference number: 4 (lower is better)
Translates to: AAAVARPPPSSSPAHIRVVAPTA*PLPYKG
Trigger: ACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAAC...AACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCCCAGTGTTGCCAACCTaGTCTGCAGACCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RPGLRPRRARFLTRVAGPPVLPT*SADPRP
Trigger: GGGGCGGGGGTCTGCAGACCAGGTTGGCAACACTGG...GGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAACCTCGGAGGAAGGTCTaGAGCCGGGGCGGCCGTACC +
Preference number: 4 (lower is better)
Translates to: GLQVPPRASGLCNVPELQPRRKV*SRGGRT
Trigger: GGTACGGCCGCCCCGGCTCCAGACCTTCCTCCGAGG...TTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATCCCGAATCTTGGCGATaGCCGCCGGATGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ARDATMGSGRWVALRARHPESWR*PPDAAV
Trigger: TACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGG...ATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCGGCAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTCCACAGCTAGCAGCTaGAGCACGGCTTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: AAAVARPPPSSSPAHIRVSTASS*STACAS
Trigger: GCTGGCGCAAGCCGTGCTCCAGCTGCTAGCTGTGGA...AACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GGCGCACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGTGGCACTGGCCGTGGTaGAGAAGGCGGCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GARSQTPAARGPSVRHPLWHWPW*RRRRRG
Trigger: TCCTCTTCGCCGCCTTCTTCACCACGGCCAGTGCCA...CAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGTGTCCTAGAGCGCAAGCATCTCGAAGGTGCCTGCTaGCTCGGGAACGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: ALRARHSHRPSRVLERKHLEGAC*LGNAHS
Trigger: GGAGTGAGCGTTCCCGAGGCAGCAGGCACCTTCGAG...ATGCTTGCGCTCTAGGACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACCAGGAGCGCACCTCATaGCGCAGCGCCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KCPQLLVSAETGRVAKAHQERTS*RSAPCR
Trigger: CCTGCAGGGGGCGCTGCGGCATGAGGTGCGCTCCTG...GTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGCGTGGCGATGGCCGCCGGATaGTGCAGTAGCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: HEARRQLPEGLPSGILCVAMAAG*CSSSRT
Trigger: CGTCCTGCTGCTACTGCAGCATCCGGCGGCCATCGC...CACGCAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACGTTCCCAGCGCGCGGTaGGCACTAGCTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: ARVAPTACPLPYKGCRSHVPSAR*ALAPQL
Trigger: TAGCTGTGGAGCTAGTGCGCACCGCGCGCTGGGAAC...GTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGTTCCCAGCGCGCGGTaGGCACTAGCTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: QRWLALLLPRVRHTSAFGVPSAR*ALAPQL
Trigger: TAGCTGTGGAGCTAGTGCGCACCGCGCGCTGGGAAC...GCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CCCATGGGCTTAGATGCTTCTCTGGCGCGGCAGCGGTGGCTCGCCCTCCTCCTTACGATGGGCACCGTCTaGATGGCGGGGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: PMGLDASLARQRWLALLLTMGTV*MAGKAG
Trigger: ACCCGCCTTCCCCGCCATGCAGACGGTGCCCATCGT...AAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGCGTGAGGGTCCAGAGGTGCTaGGCCAGGCTGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HEARRQLPEGLPSGILCVRVQRC*ARLSSR
Trigger: CCTGCTGCTCAGCCTGGCCCAGCACCTCTGGACCCT...CACGCAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCGTCCGGGGCTGGCGCTaGGCTGGACCGGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: ASLQGLQVPPRASGLCNVVRGWR*AGPGLI
Trigger: GATGAGCCCCGGTCCAGCCCAGCGCCAGCCCCGGAC...GACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGTGTCCTAGAGCGCAAGCATGCTCCTCCCGAATCTTaGCGATGGCCGCCGGATGCT +
Preference number: 4 (lower is better)
Translates to: ALRARHSHRPSRVLERKHAPPES*RWPPDA
Trigger: AGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGC...ATGCTTGCGCTCTAGGACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GGCGCACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGGCTCCTCCCGAATCTTaGCGATGGCCGCCGGATGCT +
Preference number: 4 (lower is better)
Translates to: GARSQTPAARGPSVRHPLAPPES*RWPPDA
Trigger: AGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGC...CAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp TGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACGAAGTAGCCCCCGGACACTaGCGGCAGGAGGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CPQLLVSAETGRVAKAHEVAPGH*RQEAQH
Trigger: GTGCTGCGCCTCCTGCCGCCAGTGTCCGGGGGCTAC...TTCGTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGGAAGGCGTGAGGGGGTaGAAAAAGAGCCGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SGGSPSSFLESGTHPRLAEGVRG*KKSRSP
Trigger: CGGGCTGCGGCTCTTTTTCCACCCCCTCACGCCTTC...CGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCGGCAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTCCATGCACCCTCCCTaGATTGGCTCGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: AAAVARPPPSSSPAHIRVSMHPP*IGSGRG
Trigger: TCCCCTTCCCGAGCCAATCCAGGGAGGGTGCATGGA...AACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp TCTATGGCCCAAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAGGTGCCGATGCAGCTaGTCCCTTGCCCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: SMAQSQARVAPTACPLPYRCRCS*SLARMP
Trigger: GGGCATCCGGGCAAGGGACCAGCTGCATCGGCACCT...GTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTTGGGCCATAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
3UTR CAA 72 bp GGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTaGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GCAHGVPASLQG*QVPPRASGLCN
Trigger: ATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GCAGCCATCTGGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGGGGCGCCGCTAACGTCCAGAGGCAGTaGGAAGAGGTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: AAIWASEEVMEAGPRGAANVQRQ*EEVLHE
Trigger: CTCGTGGAGAACCTCTTCTCACTGCCTCTGGACGTT...AGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCGGGCTTCCGAAGAGGTaGTGGAGGCCGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ACVGSLQCPRVAIFPLPCGLPKR*WRPAPG
Trigger: CCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCC...GCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCCCGCACAGGAGAGCAGTaGCCGCCGCCCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: VGSLQCPRVAIFPLPCHPRTGEQ*PPPPAL
Trigger: CAGTGCTGGGGGCGGCGGGCACTGCTCTCCTGTGCG...GGGGTGGCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGCGGAGGGTCCAGAGGTaGTGGGCCAGGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AWKCPQLLVSAETGRVAKRRVQR*WARLSS
Trigger: GCTGCTCAGCCTGGCCCAGCACCTCTGGACCCTCCG...CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp TGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACGAACGGAGGGTCCAGAGGTaGTGGGCCAGGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CPQLLVSAETGRVAKAHERRVQR*WARLSS
Trigger: GCTGCTCAGCCTGGCCCAGCACCTCTGGACCCTCCG...TTCGTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATCAGGAGCGCACCTCATaGCGCAGCGCCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRHFPSSGRGAQKASSHQERTS*RSAPCR
Trigger: CCTGCAGGGGGCGCTGCGGCATGAGGTGCGCTCCTG...ATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp TCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGATGCTTCTCTGGCAGGTGCGCAGGGCGGTaGGGTAGCCCCCGGACACTG +
Preference number: 4 (lower is better)
Translates to: SGRGAQKASSHGLRCFSGRCAGR*GSPRTL
Trigger: CAGTGTCCGGGGGCTACCGCACCGCCCTGCGCACCT...GCCAGAGAAGCATCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAAGCCTTCGGGAGGGCTaGGGTACACCGCAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KARPGLRPRRARFLTRVASLREG*GTPQPS
Trigger: AGACGGCTGCGGTGTACCGCAGCCCTCCCGAAGGCT...TGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GAGCCGCAGCCCGTCCACTGGGTGCACGATGGGCACCGTCTGCATGGCGGGGAAATATTCCCACTCCCCTaGCACCCCTACCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: EPQPVHWVHDGHRLHGGEIFPLP*HPYLAF
Trigger: GAAGGCGAGGTAGGGGTGGCAGGGGAGTGGGAATAT...TTCCCCGCCATGCAGACGGTGCCCATCGTGCACCCAGTGGACGGGCTGCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GCGCCGAAGCGCTCTGGATCGAAGCCTTCGGGAGGGCTGCGGTACACCGCAGCCCGTGCGTCGGGTCTCTaGAATGTCCCCGAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: APKRSGSKPSGGLRYTAARASGL*NVPELQ
Trigger: TTGCAACTCGGGGACATTGCAGAGACCCGACGCACG...GGCTGCGGTGTACCGCAGCCCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GCTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCGCACTCTGCGGCCACTaGCTGCGCACCAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: AWPTTFSFLWARSAEGIFALCGH*LRTRRC
Trigger: GCACCGCCTGGTGCGCAGCCAGTGGCCGCAGAGTGC...GAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGAGGTCCGGGCCAGCGTaGCGCACTGCGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VERVKEWARDATMGSGRWRSGPA*RTAPRP
Trigger: TGGACGAGGCGCAGTGCGCCACGCTGGCCCGGACCT...CCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACCCGCAGCCCGTCCACTaGGTGCACGATGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: KCPQLLVSAETGRVAKAHPQPVH*VHDGHR
Trigger: ACGGTGCCCATCGTGCACCCAGTGGACGGGCTGCGG...GTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GGACCAAAAGGCGGGATGGGGCATCCTAGCTGCTCTCCGGGTCCTGCCCATTGTGGAGCGGCAGATGGGTaGCGCTGCGTGCGCGCCATA +
Preference number: 4 (lower is better)
Translates to: GPKGGMGHPSCSPGPAHCGAADG*RCVRAI
Trigger: TATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCC...ACAATGGGCAGGACCCGGAGAGCAGCTAGGATGCCCCATCCCGCCTTTTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp CCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCGGTGAAAGACTGCAGTaGCCGTGCGCCCTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: PGQGCAHGVPASLQGLQVGERLQ*PCALRE
Trigger: TTCCCTAAGGGCGCACGGTCACTGCAGTCTTTCACC...GACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCCGTTCCCAGCAGAGGTaGCGGACGCGCGGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGRSQQR*RTRGVR
Trigger: GCGCACCCCGCGCGTCCGTCACCTCTGCTGGGAACG...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GAGCCGCAGCCCGTCCACTGGGTGCACGATGGGCACCGTCTGCATGGCGGGGAAGCAACTCACCAGTGTTaGCAACCTGGTCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: EPQPVHWVHDGHRLHGGEATHQC*QPGLQT
Trigger: GGTCTGCAGACCAGGTTGGCAACACTGGTGAGTTGC...TTCCCCGCCATGCAGACGGTGCCCATCGTGCACCCAGTGGACGGGCTGCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGGACGGTGAAAGACTaGAGTGACCGTGCGCCCTTA +
Preference number: 4 (lower is better)
Translates to: ARVAPTACPLPYKGCRSHRTVKD*SDRAPL
Trigger: TAAGGGCGCACGGTCACTGCAGTCTTTCACCGTCCG...GTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp TGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACGAAAGGATGTGCGCACTCTaGGGCCACTGGCTGCGCACC +
Preference number: 4 (lower is better)
Translates to: CPQLLVSAETGRVAKAHERMCAL*GHWLRT
Trigger: GGTGCGCAGCCAGTGGCCGCAGAGTGCGCACATCCT...TTCGTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGCGTGATGGGGCATCCTAGCTaGTCTCCGGGTCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: HEARRQLPEGLPSGILCVMGHPS*SPGPAH
Trigger: ATGGGCAGGACCCGGAGAGCAGCTAGGATGCCCCAT...CACGCAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAAGGAATCTTCGCGCGCTaGGCCGAAGCGCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: GLQVPPRASGLCNVPELQGIFAR*AEALWI
Trigger: GATCCAGAGCGCTTCGGCGCAGCGCGCGAAGATTCC...TTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACACGATGGGCACCGTCTaGATGGCGGGGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: KCPQLLVSAETGRVAKAHTMGTV*MAGKAG
Trigger: ACCCGCCTTCCCCGCCATGCAGACGGTGCCCATCGT...GTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp TGCGCCACCAGCTCCTCCCGAATCTTGGCGATGGCCGCCGGATGCTGCAGTAGCTCCCATGGGCTTAGATaGTTCTCTGGCGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: CATSSSRILAMAAGCCSSSHGLR*FSGAAA
Trigger: CGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGGA...GCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAAATGGCCCCCTCCAGGTaGCGATGCAGCTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GLQVPPRASGLCNVPELQMAPSR*RCSWSL
Trigger: AAGGGACCAGCTGCATCGGCACCTGGAGGGGGCCAT...TTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CCA 90 bp GCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCTCACGCGGATCACTaGCCTGCCCAGCAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: AWKCPQLLVSAETGRVAKAHADH*PAQQVR
Trigger: ACGCACCTGCTGGGCAGGCCAGTGATCCGCGTGAGC...CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp TCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTAGGTCCGGGCCAGCGTaGCGCACTGCGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SPSSFLESGTHPRLANICRSGPA*RTAPRP
Trigger: TGGACGAGGCGCAGTGCGCCACGCTGGCCCGGACCT...ACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CATCTGCAGCCCTCACGCTCTCCTCGGTTCCGCAGCCATCTGGGCTTCCGAAGACCACTGGGTGCACGATaGGCACCGTCTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: HLQPSRSPRFRSHLGFRRPLGAR*APSAWR
Trigger: CCGCCATGCAGACGGTGCCCATCGTGCACCCAGTGG...TCTTCGGAAGCCCAGATGGCTGCGGAACCGAGGAGAGCGTGAGGGCTGCAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp CCACCAGCTCCTCCCGAATCTTGGCGATGGCCGCCGGATGCTGCAGTAGCAGCAGAAGGCGTGAGGGGGTaGAAAAAGAGCCGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PPAPPESWRWPPDAAVAAEGVRG*KKSRSP
Trigger: CGGGCTGCGGCTCTTTTTCCACCCCCTCACGCCTTC...TGCTGCTACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTGGCTCTGCCAACATCCTTGCGCCGCCCCCAGCACTaGCAGGCAGCTCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GVGTCQKTFSALALPTSLRRPQH*QAAQPP
Trigger: TGGGGGCTGAGCTGCCTGTCAGTGCTGGGGGCGGCG...CAAGGATGTTGGCAGAGCCAGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp CCCATGGGCTTAGATGCTTCTCTGGCGCGGCAGCGGTGGCTCGCCCTCCTCCTTCCAGCAGGTGCGTCTTaGACACTGTCCCATAGCGCT +
Preference number: 4 (lower is better)
Translates to: PMGLDASLARQRWLALLLPAGAS*TLSHSA
Trigger: AGCGCTATGGGACAGTGTTCAAGACGCACCTGCTGG...AAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp AAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCACCTTGCGTAGGCCACTaGAGGGAACGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KARPGLRPRRARFLTRVAPCVGH*RERPEA
Trigger: TGCCTCTGGACGTTCCCTTCAGTGGCCTACGCAAGG...TGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GGGGCTGGCGCTGGGCTGGACCGGGGCTCATCTGCAGCCCTCACGCTCTCCTCGGAGTTACTGTCATCCTaGGGAGAGGATGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GAGAGLDRGSSAALTLSSELLSS*GEDAEV
Trigger: AACTTCAGCATCCTCTCCTCAGGATGACAGTAACTC...CGAGGAGAGCGTGAGGGCTGCAGATGAGCCCCGGTCCAGCCCAGCGCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp CACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTAGATTGTTGAACGAGTaGAAGAGTGGGCGCGCGACG +
Preference number: 4 (lower is better)
Translates to: HGVPASLQGLQVPPRASGRLLNE*KSGRAT
Trigger: CGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCT...ACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CCATTGCCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCCCGGGGCGCGAGCAGTaGGCAGTGCTCACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PLPFPCTRLRLGYLDAPSPGREQ*AVLTCS
Trigger: GGAACAGGTGAGCACTGCGCACTGCTCGCGCCCCGG...GCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGGCAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCGGCCTGCCCAGCAGGTaGGTCTTGAACACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RAWKCPQLLVSAETGRVAGLPSR*VLNTVP
Trigger: TGGGACAGTGTTCAAGACGCACCTGCTGGGCAGGCC...GGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCCCTCATCTTGAGGACTaGCTGTGCCTCAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QRWLALLLPRVRHTSAFGPHLED*LCLKVG
Trigger: CCCCACTTTGAGGCACAGGCAGTCCTCAAGATGAGG...GCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCCAGCCCGTCCACTGGGTaGACGATGGGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: VGSLQCPRVAIFPLPCHPSPSTG*TMGTVC
Trigger: GCAGACGGTGCCCATCGTGCACCCAGTGGACGGGCT...GGGGTGGCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCATCCCATGGGCTTAGATaGTTCTCTGGCGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KARPGLRPRRARFLTRVASHGLR*FSGAAA
Trigger: CGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGGA...TGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGCCGAAGCGCTCTGGATCGAAGCCTTCGGGAGGGCTGCGGTACACCGCAGCCGCAATGTCCCCGAGTTaGAATATTCCCACTCCCCTG +
Preference number: 4 (lower is better)
Translates to: APKRSGSKPSGGLRYTAAAMSPS*NIPTPL
Trigger: CAGGGGAGTGGGAATATTGCAACTCGGGGACATTGC...GGCTGCGGTGTACCGCAGCCCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp TCGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCAAGCCAGACGCCAGCTaGCAGAGGGCCTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: SSLEVPTVASFRRDRQSGKPDAS*QRAFRQ
Trigger: CTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTT...GCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGCAGCACCTCCTTGACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCTTTCGAGCCTGGAAGTaGCCACAGTTGCTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AQHLLDHAVDVAQTAQRRFRAWK*PQLLVS
Trigger: GGAAACTAGCAACTGTGGGCACTTCCAGGCTCGAAA...GCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAAGACTCCTTCAGCTCCTaGATGGAGGGCTCATGGCCC +
Preference number: 4 (lower is better)
Translates to: GLQVPPRASGLCNVPELQDSFSS*MEGSWP
Trigger: GGGCCATGAGCCCTCCATGCAGGAGCTGAAGGAGTC...TTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CCA 90 bp GTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCCAGGGTCCAGAGGTGCTaGGCCAGGCTGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGSLQCPRVAIFPLPCHPRVQRC*ARLSSR
Trigger: CCTGCTGCTCAGCCTGGCCCAGCACCTCTGGACCCT...GGGGTGGCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGGTACTAGGCTCAGGCTaGGGTACCTTGATGCACCCA +
Preference number: 4 (lower is better)
Translates to: SGGSPSSFLESGTHPRLAVLGSG*GTLMHP
Trigger: TGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTAC...CGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp AAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACGTCCATGTCCATGCCTaGCACAGAGCCCAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: KCPQLLVSAETGRVAKAHVHVHA*HRAQCG
Trigger: GCCGCACTGGGCTCTGTGCCAGGCATGGACATGGAC...GTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCGTAGCCCCCGGACACTaGCGGCAGGAGGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGVAPGH*RQEAQH
Trigger: GTGCTGCGCCTCCTGCCGCCAGTGTCCGGGGGCTAC...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCACTGGGTGCACGATaGGCACCGTCTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: ASLQGLQVPPRASGLCNVPLGAR*APSAWR
Trigger: CCGCCATGCAGACGGTGCCCATCGTGCACCCAGTGG...GACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCCCCTCCATTCCTGCTTaGCCCACGACATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RDATMGSGRWVALRARHSPSIPA*PTTFSF
Trigger: GAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGG...GCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp AGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCAAAACAGACGGACGGTaGAAGACTGCAGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: RPGLRPRRARFLTRVAGPKTDGR*KTAVTV
Trigger: CACGGTCACTGCAGTCTTTCACCGTCCGTCTGTTTT...GGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCGGAGGCGTCGTAGACTaGGACCGGCCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VGIYLFPPFLLGPRHFPSGGVVD*DRPARR
Trigger: GCGGCGGGCGGGCCGGTCTCAGTCTACGACGCCTCC...GGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGCCTTGCGTAGGCCACTaGAGGGAACGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AWKCPQLLVSAETGRVAKPCVGH*RERPEA
Trigger: TGCCTCTGGACGTTCCCTTCAGTGGCCTACGCAAGG...CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp CCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGATGCTTCTCTGTGGCACTGGCCGTGGTaGAGAAGGCGGCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLGAERRRHLPMGLDASLWHWPW*RRRRRG
Trigger: TCCTCTTCGCCGCCTTCTTCACCACGGCCAGTGCCA...CAGAGAAGCATCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp CCCATGGGCTTAGATGCTTCTCTGGCGCGGCAGCGGTGGCTCGCCCTCCTCCTTGCAGCCTTGTCCTCGTaGAGCTTCTCAGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: PMGLDASLARQRWLALLLAALSS*SFSEMA
Trigger: GGCCATTTCTGAGAAGCTTCACGAGGACAAGGCTGC...AAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR GCA 90 bp CTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGACCGGGGCGCGAGCAGTaGGCAGTGCTCACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFPPFLLGPRHFPSSGRGPGREQ*AVLTCS
Trigger: GGAACAGGTGAGCACTGCGCACTGCTCGCGCCCCGG...TCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCATGGCCGCCGGATGCTaGAGTAGCAGCAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: ACVGSLQCPRVAIFPLPCMAAGC*SSSRTS
Trigger: GCTCGTCCTGCTGCTACTGCAGCATCCGGCGGCCAT...GCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGAGCAGATGGGTGGCGCTaGGTGCGCGCCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: HFPSSGRGAQKASSHGLRADGWR*VRAIAT
Trigger: GGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGC...TCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCGCAGGTCCCACCGCGTaGGTCGGGTCTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: ASLQGLQVPPRASGLCNVAGPTA*VGSLQC
Trigger: ACATTGCAGAGACCCGACGCACGCGGTGGGACCTGC...GACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGGGAGACGTGTTGGTGTaGCTATTCTCCTCTGTATAC +
Preference number: 4 (lower is better)
Translates to: EWARDATMGSGRWVALRAGDVLV*LFSSVY
Trigger: GTATACAGAGGAGAATAGGCACACCAACACGTCTCC...CGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp TCGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCGGCATCACCCGGCTCTaGAGCCTTGTCCTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSLEVPTVASFRRDRQSGGITRL*SLVLVK
Trigger: CTTCACGAGGACAAGGCTGCAGAGCCGGGTGATGCC...GCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CCA 90 bp CACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGCGTGCTCAGGACTTTTTCCTaGCTCCTGGGCCCAAATGCC +
Preference number: 4 (lower is better)
Translates to: HEARRQLPEGLPSGILCVLRTFS*LLGPNA
Trigger: GGCATTTGGGCCCAGGAGCCAGGAAAAAGTCCTGAG...CACGCAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCCCGTCCGCAAAAGGCCTaGGGTTTGGGGGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: VGSLQCPRVAIFPLPCHPRPQKA*GLGAKP
Trigger: GGGCTTTGCCCCCAAACCCCAGGCCTTTTGCGGACG...GGGGTGGCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTCTGACTCCCACGGAGGTCGTGTaGCCAGCCCCAGGTCACACC +
Preference number: 4 (lower is better)
Translates to: PCTRLRLGYLDAPSKALTPTEVV*PAPGHT
Trigger: GGTGTGACCTGGGGCTGGCCACACGACCTCCGTGGG...AGTCAGAGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCGGAGCGGCAGATGGGTaGCGCTGCGTGCGCGCCATA +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGGAADG*RCVRAI
Trigger: TATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCC...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCACATTTTCCTTCCTCTaGGCGCGGAGCGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAWKCPQLLVSAETGRVATFSFL*ARSAEG
Trigger: GCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGT...GGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAAGCCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAACATTTTCCTTCCTCTaGGCGCGGAGCGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KARPGLRPRRARFLTRVATFSFL*ARSAEG
Trigger: GCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGT...TGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCCGCACCCTCCCTGGATTaGCTCGGGAAGGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VGSLQCPRVAIFPLPCHPAPSLD*LGKGKP
Trigger: TGGCTTCCCCTTCCCGAGCCAATCCAGGGAGGGTGC...GGGGTGGCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp AAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACCCAGCAGGTGCGTCTTaGACACTGTCCCATAGCGCT +
Preference number: 4 (lower is better)
Translates to: KCPQLLVSAETGRVAKAHPAGAS*TLSHSA
Trigger: AGCGCTATGGGACAGTGTTCAAGACGCACCTGCTGG...GTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCCTGTGCCTCAAAGTGGGGCCACACAAGATGTGGCTCTGGGGATGCAGCATTGGCGAGCAGTGCGCAGTaGTCACCTGTTCCGTCCGCA +
Preference number: 4 (lower is better)
Translates to: ACASKWGHTRCGSGDAALASSAQ*SPVPSA
Trigger: TGCGGACGGAACAGGTGAGCACTGCGCACTGCTCGC...CAATGCTGCATCCCCAGAGCCACATCTTGTGTGGCCCCACTTTGAGGCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCGGCCTGCCCAGCAGGTaGGTCTTGAACACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: ACVGSLQCPRVAIFPLPCGLPSR*VLNTVP
Trigger: TGGGACAGTGTTCAAGACGCACCTGCTGGGCAGGCC...GCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCGCACCTAGCAGTGTGTaGGAGCCCAGCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: ACVGSLQCPRVAIFPLPCAPSSV*EPSRMC
Trigger: GCACATCCTGCTGGGCTCGCACACACTGCTAGGTGC...GCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GTGGCTGAGTCATTACTGGAACCCAGGTCTCCTCTTGCCCCTCATCTTGAGGACGCAACCCCAGCAGGATaGGCGCGGCCATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VAESLLEPRSPLAPHLEDATPAG*ARPCGR
Trigger: CCTTCCGCATGGCCGCGCGCATCCTGCTGGGGTTGC...GTCCTCAAGATGAGGGGCAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GGACCAAAAGGCGGGATGGGGCATCCTAGCTGCTCTCCGGGTCCTGCCCATTGTAGCTGTCCATGTCCATaGCTGGCACAGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPKGGMGHPSCSPGPAHCSCPCP*LAQSPV
Trigger: CACTGGGCTCTGTGCCAGGCATGGACATGGACAGCT...ACAATGGGCAGGACCCGGAGAGCAGCTAGGATGCCCCATCCCGCCTTTTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp TCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTGCAGGTCCCACCGCGTaGGTCGGGTCTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: SPSSFLESGTHPRLANICAGPTA*VGSLQC
Trigger: ACATTGCAGAGACCCGACGCACGCGGTGGGACCTGC...ACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GCTCTGGGGATGCAGCATTGGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTCCAGGGGCGCCGCTGTaGGAAGGAGTCCGACCGACT +
Preference number: 4 (lower is better)
Translates to: ALGMQHWCRDLPENLLSTPGAPL*EGVRPT
Trigger: AGTCGGTCGGACTCCTTCCCACAGCGGCGCCCCTGG...AGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp CGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCAAACCTTCTCAGCACTaGCTCTGCCAACATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RDATMGSGRWVALRARHSKPSQH*LCQHPC
Trigger: ACAAGGATGTTGGCAGAGCCAGTGCTGAGAAGGTTT...GCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp CCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGATGCTTCTCTGTCCATGCACCCTCCCTaGATTGGCTCGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLGAERRRHLPMGLDASLSMHPP*IGSGRG
Trigger: TCCCCTTCCCGAGCCAATCCAGGGAGGGTGCATGGA...CAGAGAAGCATCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CAA 72 bp GACCTTGAGCCCTTTCGAGCCTGGAAGTGCCCACAGTaGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DLEPFRAWKCPQ*LVSAETGRVAK
Trigger: CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGAAAGGGCTCAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCGGCGCAGCACCTCCTTaGCCACGCAGTCGACGTAGC +
Preference number: 4 (lower is better)
Translates to: KPSSTSWGSIYSLHSCLAGAAPP*PRSRRS
Trigger: GCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGCC...GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCGAGGCTGAGGTCGGGTTGGCGAACATTTGTTaGAAGATTGTTGAACGAGTG +
Preference number: 4 (lower is better)
Translates to: DHAVDVAQTAQRREAEVGLANIC*KIVERV
Trigger: CACTCGTTCAACAATCTTTCAACAAATGTTCGCCAA...CCCGACCTCAGCCTCGCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGTCCCTCTCGAAGGTaGCTGCTGCCTCGGGAACGC +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGSPSRR*LLPRER
Trigger: GCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACT...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp ACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTGCTCCTGGGCCCAAATaGCAGTCCCTCTCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TTFSFLWARSAEGIFPWAAPGPK*QSLSKV
Trigger: CACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGC...AGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATCGGACGGTGAAAGACTaGAGTGACCGTGCGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GPRHFPSSGRGAQKASSHRTVKD*SDRAPL
Trigger: TAAGGGCGCACGGTCACTGCAGTCTTTCACCGTCCG...ATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCTCTGGGGATGCAGCATTGGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTGAGCCCAGCAGGATGTaGGCACTCTGCGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: ALGMQHWCRDLPENLLSTEPSRM*ALCGHW
Trigger: CCAGTGGCCGCAGAGTGCGCACATCCTGCTGGGCTC...AGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTGCCAGCGTGGCGCACTaGGCCTCGTCCAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFASVAH*ASSSRN
Trigger: GTTGCGGCTGGACGAGGCGCAGTGCGCCACGCTGGC...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGTGGGCAATAGGGGATaGCTCTCCAGAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AWKCPQLLVSAETGRVAKVGNRG*LSRVQG
Trigger: TCCCTGAACTCTGGAGAGGCATCCCCTATTGCCCAC...CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CAGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCTCTCAGCACTGGCTCTaGCAACATCCTTGTGTTAAC +
Preference number: 4 (lower is better)
Translates to: QRWLALLLPRVRHTSAFGSQHWL*QHPCVN
Trigger: GTTAACACAAGGATGTTGGCAGAGCCAGTGCTGAGA...GCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GGACCAAAAGGCGGGATGGGGCATCCTAGCTGCTCTCCGGGTCCTGCCCATTGTATGTGGCTCTGGGGATaGAGCATTGGTGTAGGGACC +
Preference number: 4 (lower is better)
Translates to: GPKGGMGHPSCSPGPAHCMWLWG*SIGVGT
Trigger: GGTCCCTACACCAATGCTGCATCCCCAGAGCCACAT...ACAATGGGCAGGACCCGGAGAGCAGCTAGGATGCCCCATCCCGCCTTTTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CCAGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCTATTCCCTCCATTCCTaGTTGGCCCACGACATTTTC +
Preference number: 4 (lower is better)
Translates to: PGQGCAHGVPASLQGLQVYSLHS*LAHDIF
Trigger: GAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATA...GACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGCTTCCTTACAAGGGTTaGAGGTCCCACCGCGTGCGT +
Preference number: 4 (lower is better)
Translates to: VERVKEWARDATMGSGRWLPYKG*RSHRVR
Trigger: ACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAG...CCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATACTTCCTTACAAGGGTTaGAGGTCCCACCGCGTGCGT +
Preference number: 4 (lower is better)
Translates to: VAGPTACVGSLQCPRVAILPYKG*RSHRVR
Trigger: ACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAG...TATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTGTTGCGCCCACGGCGTaGCCGCTTCCTTACAAGGGT +
Preference number: 4 (lower is better)
Translates to: PFPCTRLRLGYLDAPSKAVAPTA*PLPYKG
Trigger: ACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAAC...AGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp CAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATGCTCACGCGGATCACTaGCCTGCCCAGCAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: QHLVGIYLFPPFLLGPRHAHADH*PAQQVR
Trigger: ACGCACCTGCTGGGCAGGCCAGTGATCCGCGTGAGC...ATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCAGGAGTCCGACCGACTaGCAGGACGCCTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: KPSSTSWGSIYSLHSCLARSPTD*QDACHR
Trigger: TCGGTGGCAGGCGTCCTGCCAGTCGGTCGGACTCCT...GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCCTGTAATGGAAGCGGCTaGAGGCGCCCCGGGAATCTT +
Preference number: 4 (lower is better)
Translates to: VGSLQCPRVAIFPLPCHPCNGSG*RRPGNL
Trigger: AAGATTCCCGGGGCGCCTCCAGCCGCTTCCATTACA...GGGGTGGCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCGCACCCTCCCTGGATTaGCTCGGGAAGGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGAPSLD*LGKGKP
Trigger: TGGCTTCCCCTTCCCGAGCCAATCCAGGGAGGGTGC...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp TCGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCCCTTGCACTGTGAATaGTTAGGTCGAGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: SSLEVPTVASFRRDRQSGPLHCE*LGRGHH
Trigger: GTGATGCCCTCGACCTAATCATTCACAGTGCAAGGG...GCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR GCA 90 bp GCTCTGGGGATGCAGCATTGGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTGGAATCTTCGCGCGCTaGGCCGAAGCGCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: ALGMQHWCRDLPENLLSTGIFAR*AEALWI
Trigger: GATCCAGAGCGCTTCGGCGCAGCGCGCGAAGATTCC...AGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp CATCTGCAGCCCTCACGCTCTCCTCGGTTCCGCAGCCATCTGGGCTTCCGAAGAGGGCTCAGCACCCTTTaGATAGAAGAAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HLQPSRSPRFRSHLGFRRGLSTL*IEEGKE
Trigger: CTCCTTCCCTTCTTCTATCCAAAGGGTGCTGAGCCC...TCTTCGGAAGCCCAGATGGCTGCGGAACCGAGGAGAGCGTGAGGGCTGCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGGGCTCAGCACCCTTTaGATAGAAGAAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AWKCPQLLVSAETGRVAKGLSTL*IEEGKE
Trigger: CTCCTTCCCTTCTTCTATCCAAAGGGTGCTGAGCCC...CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CGGCCAAGCCGTGTCCTAGAGCGCAAGCATGTCAGAGGCATAGCCCATTCCCCGTCCTGGCCTGGCATATaGCTGGGCTCAGTAAATGGT +
Preference number: 4 (lower is better)
Translates to: RPSRVLERKHVRGIAHSPSWPGI*LGSVNG
Trigger: ACCATTTACTGAGCCCAGCCATATGCCAGGCCAGGA...CGGGGAATGGGCTATGCCTCTGACATGCTTGCGCTCTAGGACACGGCTTGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCTCACGCTCCAGCCCTTaGGGATCTGGTAGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGSRSSP*GSGSRR
Trigger: TCGACGGCTACCAGATCCCCAAGGGCTGGAGCGTGA...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCTGCGCCGAAGCGCTCTaGATCGAAGCCTTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KPSSTSWGSIYSLHSCLACAEAL*IEAFGR
Trigger: CCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGCA...GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCCCGCAGCCCGTCCACTaGGTGCACGATGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: GDLSIPSIPAWPTTFSFLPQPVH*VHDGHR
Trigger: ACGGTGCCCATCGTGCACCCAGTGGACGGGCTGCGG...GAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GGCGCACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGGCACACATCCGCGTTTaGCGAACATTTGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GARSQTPAARGPSVRHPLAHIRV*RTFVER
Trigger: TCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGC...CAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp TGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACGAACCAAGCAGCACCTCGTaGGGATCTATCTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: CPQLLVSAETGRVAKAHEPSSTS*GSIYSL
Trigger: GAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGG...TTCGTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCTCCTGCCCATTGTTCTaGAGTCTGGAGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ACVGSLQCPRVAIFPLPCSCPLF*SLEKQQ
Trigger: CTGCTGCTTCTCCAGACTTCAGAACAATGGGCAGGA...GCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATAATCACAATCCCCCTCTaGGCCACAGCAGAGTTACTG +
Preference number: 4 (lower is better)
Translates to: VAGPTACVGSLQCPRVAIITIPL*ATAELL
Trigger: CAGTAACTCTGCTGTGGCTCAGAGGGGGATTGTGAT...TATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCGGCGCAGCACCTCCTTaGCCACGCAGTCGACGTAGC +
Preference number: 4 (lower is better)
Translates to: VGIYLFPPFLLGPRHFPSGAAPP*PRSRRS
Trigger: GCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGCC...GGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GTGGCTGAGTCATTACTGGAACCCAGGTCTCCTCTTGCCCCTCATCTTGAGGACGCTCCTGGGCCCAAATaGCAGTCCCTCTCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VAESLLEPRSPLAPHLEDAPGPK*QSLSKV
Trigger: CACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGC...GTCCTCAAGATGAGGGGCAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTGAGCCCAGCAGGATGTaGGCACTCTGCGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFEPSRM*ALCGHW
Trigger: CCAGTGGCCGCAGAGTGCGCACATCCTGCTGGGCTC...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCATATTCCCACTCCCCTaGCACCCCTACCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGIFPLP*HPYLAF
Trigger: GAAGGCGAGGTAGGGGTGGCAGGGGAGTGGGAATAT...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGACGTGCGTCGGGTCTCTaGAATGTCCCCGAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: HFPSSGRGAQKASSHGLRRASGL*NVPELQ
Trigger: TTGCAACTCGGGGACATTGCAGAGACCCGACGCACG...TCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp TCGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCTTTCGAGCCTGGAAGTaGCCACAGTTGCTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SSLEVPTVASFRRDRQSGFRAWK*PQLLVS
Trigger: GGAAACTAGCAACTGTGGGCACTTCCAGGCTCGAAA...GCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAGATTGTTGAACGAGTGAAAGAGTGGGCGCGCGACGCTACAATGGGGAGCGGCGGTTCCGCAGCCATCTaGGCTTCCGAAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: KIVERVKEWARDATMGSGGSAAI*ASEEVM
Trigger: CATCACCTCTTCGGAAGCCCAGATGGCTGCGGAACC...GCCGCTCCCCATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp CCATTGCCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCGCCTCTGTAAGAGCGTaGGCAATAGGGGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLPFPCTRLRLGYLDAPSASVRA*AIGDAS
Trigger: AGAGGCATCCCCTATTGCCCACGCTCTTACAGAGGC...GCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp TCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACATGGGGAGCGGCAGATaGGTGGCGCTGCGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: SSPAHIRVWRTFVERLLNMGSGR*VALRAR
Trigger: GCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCAT...GTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp TCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTGAACGAGTGAAAGAGTaGGCGCGCGACGCTACAATG +
Preference number: 4 (lower is better)
Translates to: SPSSFLESGTHPRLANICERVKE*ARDATM
Trigger: CATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTC...ACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp TCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGATGCTTCTCTGGCCCAAGCAGCACCTCGTaGGGATCTATCTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: SGRGAQKASSHGLRCFSGPSSTS*GSIYSL
Trigger: GAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGG...GCCAGAGAAGCATCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGATGCTTCTCTGGCGTTGGAGACGTGTTaGTGTGCCTATTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLGAERRRHLPMGLDASLALETC*CAYSPL
Trigger: CAGAGGAGAATAGGCACACCAACACGTCTCCAACGC...CAGAGAAGCATCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAGGCGCACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCAAAATAATCCAGCGTTaGAGACGTGTTGGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KAHEARRQLPEGLPSGILKIIQR*RRVGVP
Trigger: AGGCACACCAACACGTCTCCAACGCTGGATTATTTT...GAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTGCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CCCATGGGCTTAGATGCTTCTCTGGCGCGGCAGCGGTGGCTCGCCCTCCTCCTTAAAATAATCCAGCGTTaGAGACGTGTTGGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PMGLDASLARQRWLALLLKIIQR*RRVGVP
Trigger: AGGCACACCAACACGTCTCCAACGCTGGATTATTTT...AAGGAGGAGGGCGAGCCACCGCTGCCGCGCCAGAGAAGCATCTAAGCCCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCCTTCAGCTCCTGCATaGAGGGCTCATGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KPSSTSWGSIYSLHSCLAPSAPA*RAHGPA
Trigger: AGCTGGGCCATGAGCCCTCCATGCAGGAGCTGAAGG...GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR TCA 90 bp CAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATGGTGAAAGACTGCAGTaGCCGTGCGCCCTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: QHLVGIYLFPPFLLGPRHGERLQ*PCALRE
Trigger: TTCCCTAAGGGCGCACGGTCACTGCAGTCTTTCACC...ATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp CTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGAAACGTCCAGAGGCAGTaGGAAGAGGTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: LFPPFLLGPRHFPSSGRGNVQRQ*EEVLHE
Trigger: CTCGTGGAGAACCTCTTCTCACTGCCTCTGGACGTT...TCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCAGCAAAGCTCTaGCTTAGAGGACACTATTGG +
Preference number: 4 (lower is better)
Translates to: ACVGSLQCPRVAIFPLPCHPAKL*LRGHYW
Trigger: CCAATAGTGTCCTCTAAGTCAGAGCTTTGCTGGGTG...GCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp CCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTTCTTGCCCCTCATCTTaGGGACTGCCTGTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: PFPCTRLRLGYLDAPSKASCPSS*GLPVPQ
Trigger: TTGAGGCACAGGCAGTCCTCAAGATGAGGGGCAAGA...AGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGAGCAACTCACCAGTGTTaGCAACCTGGTCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: HFPSSGRGAQKASSHGLRATHQC*QPGLQT
Trigger: GGTCTGCAGACCAGGTTGGCAACACTGGTGAGTTGC...TCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCAGGTTCTCCACGAGCTaGTCGAAGGTCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGIYLFPPFLLGPRHFPSRFSTS*SKVRAS
Trigger: GCTGGCCCGGACCTTCGAGCAGCTCGTGGAGAACCT...GGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGACTAGGGTCAGCCCATTaGCCTTTCCCTGTACTAGGC +
Preference number: 4 (lower is better)
Translates to: HFPSSGRGAQKASSHGLRLGSAH*PFPVLG
Trigger: GCCTAGTACAGGGAAAGGGCAATGGGCTGACCCTAG...TCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GCTCTGGGGATGCAGCATTGGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTCTGGAGGCTGAAGGCTaGAGAGGTAGTGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ALGMQHWCRDLPENLLSTLEAEG*RGSECG
Trigger: GCCACACTCACTACCTCTGCAGCCTTCAGCCTCCAG...AGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp AGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACGAGAGCTGGAGCACGGCTTaGGCCAGCTCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SPAHIRVWRTFVERLLNESWSTA*ASSWPR
Trigger: CCTCGGCCAGGAGCTGGCGCAAGCCGTGCTCCAGCT...CTCGTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp TCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTGCTGGGCTCAGTAAATaGTCGGGGATATGTCCACTG +
Preference number: 4 (lower is better)
Translates to: SPSSFLESGTHPRLANICAGLSK*SGICPL
Trigger: CAGTGGACATATCCCCGACCATTTACTGAGCCCAGC...ACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATGGCTGAGTCATTACTaGAACCCAGGTCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VAGPTACVGSLQCPRVAIWLSHY*NPGLLL
Trigger: CAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCA...TATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCTGTAATGGAAGCGGCTaGAGGCGCCCCGGGAATCTT +
Preference number: 4 (lower is better)
Translates to: KPSSTSWGSIYSLHSCLACNGSG*RRPGNL
Trigger: AAGATTCCCGGGGCGCCTCCAGCCGCTTCCATTACA...GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGTGGCCTTCCTATTTTTaGTACAAATATCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: EWARDATMGSGRWVALRAWPSYF*YKYLKP
Trigger: AGGTTTGAGATATTTGTACCAAAAATAGGAAGGCCA...CGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp CATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGAAAAACAGACGGACGGTaGAAGACTGCAGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: HFPSSGRGAQKASSHGLRKTDGR*KTAVTV
Trigger: CACGGTCACTGCAGTCTTTCACCGTCCGTCTGTTTT...TCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp GAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACACAGGGCTGGTGGAGCTaGCGCCCACACCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ENNPALETCWCAYSPLYTQGWWS*RPHPWV
Trigger: GACCCAGGGGTGTGGGCGTCAGCTCCACCAGCCCTG...TGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GCTCTGGGGATGCAGCATTGGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTAGATTGTTGAACGAGTaGAAGAGTGGGCGCGCGACG +
Preference number: 4 (lower is better)
Translates to: ALGMQHWCRDLPENLLSTRLLNE*KSGRAT
Trigger: CGTCGCGCGCCCACTCTTTCACTCGTTCAACAATCT...AGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp GTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCGCACCTAGCAGTGTGTaGGAGCCCAGCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VGIYLFPPFLLGPRHFPSAPSSV*EPSRMC
Trigger: GCACATCCTGCTGGGCTCGCACACACTGCTAGGTGC...GGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp CACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCCGAATCTTGGCGATaGCCGCCGGATGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: HLVGIYLFPPFLLGPRHFPESWR*PPDAAV
Trigger: TACTGCAGCATCCGGCGGCCATCGCCAAGATTCGGG...AAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATCGGGGAAGGCGGGTGTaGCCAGTTCCCAGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: KIIQRWRRVGVPILLCIHRGRRV*PVPSAR
Trigger: CCGCGCGCTGGGAACTGGCCACACCCGCCTTCCCCG...ATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp CAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATGGTAGTGAGTGTGGCTaGGTCATTACTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: QHLVGIYLFPPFLLGPRHGSECG*VITGTQ
Trigger: CTGGGTTCCAGTAATGACTCAGCCACACTCACTACC...ATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGTTGTTGAAAGATTGTTaGACGAGTGAAAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AWKCPQLLVSAETGRVAKLLKDC*TSERVG
Trigger: GCCCACTCTTTCACTCGTTCAACAATCTTTCAACAA...CTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp TCGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCTTGTTGAAAGATTGTTaGACGAGTGAAAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SSLEVPTVASFRRDRQSGLLKDC*TSERVG
Trigger: GCCCACTCTTTCACTCGTTCAACAATCTTTCAACAA...GCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATGACAAGAGTAAATGGGCTGGCGCTGGGCTaGACCGGGGCTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: VGDVLVCLFSSVYMTRVNGLALG*TGAHLQ
Trigger: CTGCAGATGAGCCCCGGTCCAGCCCAGCGCCAGCCC...ATTTACTCTTGTCATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp CAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATGCGTTGGAGACGTGTTaGTGTGCCTATTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QHLVGIYLFPPFLLGPRHALETC*CAYSPL
Trigger: CAGAGGAGAATAGGCACACCAACACGTCTCCAACGC...ATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp GGCGCACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGTGGCCTTCCTATTTTTaGTACAAATATCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: GARSQTPAARGPSVRHPLWPSYF*YKYLKP
Trigger: AGGTTTGAGATATTTGTACCAAAAATAGGAAGGCCA...CAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CAA 72 bp TTCCTTTTAAGAAGTGGCCAGCAGAATCCGGTGACCTaGAGCCCTTTCGAGCCTGGAAGTGCCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: FLLRSGQQNPVT*SPFEPGSAHSC
Trigger: GCAACTGTGGGCACTTCCAGGCTCGAAAGGGCTCAAGGTCACCGGATTCTGCTGGCCACTTCTTAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTGCAATGTCCCCGAGTTaGAATATTCCCACTCCCCTG +
Preference number: 4 (lower is better)
Translates to: STSWGSIYSLHSCLAHDIAMSPS*NIPTPL
Trigger: CAGGGGAGTGGGAATATTGCAACTCGGGGACATTGC...AATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp CCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTGGAGACGTGTTGGTGTaGCTATTCTCCTCTGTATAC +
Preference number: 4 (lower is better)
Translates to: PFPCTRLRLGYLDAPSKAGDVLV*LFSSVY
Trigger: GTATACAGAGGAGAATAGGCACACCAACACGTCTCC...AGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACACCAGTGTTGCCAACCTaGTCTGCAGACCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ENNPALETCWCAYSPLYTPVLPT*SADPRP
Trigger: GGGGCGGGGGTCTGCAGACCAGGTTGGCAACACTGG...TGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTCCCTCCATTCCTGCTTaGCCCACGACATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: STSWGSIYSLHSCLAHDIPSIPA*PTTFSF
Trigger: GAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGG...AATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CAA 72 bp GAGGAGAGGATGCTGAAGTTCAGAGAGGTCAAGCAATaGCCCAGAGTCACACAGCTGTCCATGTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: EERMLKFREVKQ*PRVTQLSMSMP
Trigger: AGGCATGGACATGGACAGCTGTGTGACTCTGGGCAATTGCTTGACCTCTCTGAACTTCAGCATCCTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp GTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCAGCTCCCTTGCACTGTaGATGATTAGGTCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGIYLFPPFLLGPRHFPSSSLAL*MIRSRA
Trigger: TGCCCTCGACCTAATCATTCACAGTGCAAGGGAGCT...GGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR GCA 90 bp AAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATGTTGCCAACCTGGTCTaGAGACCCCCGCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: KIIQRWRRVGVPILLCIHVANLV*RPPPHL
Trigger: CAGGTGGGGCGGGGGTCTGCAGACCAGGTTGGCAAC...ATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GTGGCTGAGTCATTACTGGAACCCAGGTCTCCTCTTGCCCCTCATCTTGAGGACTATTCCCTCCATTCCTaGTTGGCCCACGACATTTTC +
Preference number: 4 (lower is better)
Translates to: VAESLLEPRSPLAPHLEDYSLHS*LAHDIF
Trigger: GAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATA...GTCCTCAAGATGAGGGGCAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp GTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATGACAAGAGTAAATCGCGCGACGCTACAATaGGGAGCGGCAGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGDVLVCLFSSVYMTRVNRATLQ*GAADGW
Trigger: CCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCG...ATTTACTCTTGTCATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp ACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTTGGCGAACATTTGTTaGAAGATTGTTGAACGAGTG +
Preference number: 4 (lower is better)
Translates to: TTFSFLWARSAEGIFPWALANIC*KIVERV
Trigger: CACTCGTTCAACAATCTTTCAACAAATGTTCGCCAA...AGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp AAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATAGGTTCTCCACGAGCTaGTCGAAGGTCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KIIQRWRRVGVPILLCIHRFSTS*SKVRAS
Trigger: GCTGGCCCGGACCTTCGAGCAGCTCGTGGAGAACCT...ATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR GCA 90 bp GGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCGAGAGGTCAAGCAATTaGCCAGAGTCACACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GDLSIPSIPAWPTTFSFLERSSN*PESHSC
Trigger: ACAGCTGTGTGACTCTGGGCAATTGCTTGACCTCTC...GAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp ATGAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATAAAGCCAGACGCCAGCTaGCAGAGGGCCTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: MKIIQRWRRVGVPILLCIKPDAS*QRAFRQ
Trigger: CTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTT...TATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATCGTCCGCAAAAGGCCTaGGGTTTGGGGGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: KIIQRWRRVGVPILLCIHRPQKA*GLGAKP
Trigger: GGGCTTTGCCCCCAAACCCCAGGCCTTTTGCGGACG...ATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp ATGAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATATGCGCCGAAGCGCTCTaGATCGAAGCCTTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: MKIIQRWRRVGVPILLCICAEAL*IEAFGR
Trigger: CCTCCCGAAGGCTTCGATCCAGAGCGCTTCGGCGCA...TATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACATTCCACAGCTAGCAGCTaGAGCACGGCTTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: KIIQRWRRVGVPILLCIHSTASS*STACAS
Trigger: GCTGGCGCAAGCCGTGCTCCAGCTGCTAGCTGTGGA...ATGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CAA 72 bp AAGCATTCCCCCGGGGAAAGCACTGTAATTCAGCACTaGAGTTCCATAGTCGGAGGAGATGAGGTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: KHSPGESTVIQH*SSIVGGDEVKV
Trigger: GACTTTAACCTCATCTCCTCCGACTATGGAACTCAAGTGCTGAATTACAGTGCTTTCCCCGGGGGAATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR TCA 90 bp ATGAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATAGAAGCAGCAGTTCTCTaGTCCCGAAACCTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: MKIIQRWRRVGVPILLCIEAAVL*SRNLAG
Trigger: ACCCGCTAGGTTTCGGGATCAGAGAACTGCTGCTTC...TATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGACATGACAAGAGTAAATaGCTTCTTAAGGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: LFPPFLLGPRHFPSSGRGHDKSK*LLKVGI
Trigger: AATTCCTACCTTAAGAAGGCATTTACTCTTGTCATG...TCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp ATGAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACTGGGGATGCAGCATTaGTGTAGGGACCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: MKIIQRWRRVGVPILLCILGMQH*CRDLPE
Trigger: TTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAG...TATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CCA 90 bp ATGAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATAGAACGAGTGAAAGAGTaGGCGCGCGACGCTACAATG +
Preference number: 4 (lower is better)
Translates to: MKIIQRWRRVGVPILLCIERVKE*ARDATM
Trigger: CATTGTAGCGTCGCGCGCCCACTCTTTCACTCGTTC...TATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR TCA 90 bp AGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTATTTTTATGCAGGTaGCTGAAAACCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: STSWGSIYSLHSCLAHDILFLCR*LKTRES
Trigger: TGATTCCCTGGTTTTCAGTCACCTGCATAAAAATAA...AATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR GCA 90 bp CAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATCATGACAAGAGTAAATaGCTTCTTAAGGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: QHLVGIYLFPPFLLGPRHHDKSK*LLKVGI
Trigger: AATTCCTACCTTAAGAAGGCATTTACTCTTGTCATG...ATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CCA 90 bp AGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACGAGGCACACATCCGCGTTTaGCGAACATTTGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SPAHIRVWRTFVERLLNEAHIRV*RTFVER
Trigger: TCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGC...CTCGTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
3UTR CAA 72 bp AATTATGTCTCAACCTCCCATGAAAATAATCCAGCGTaGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: NYVSTSHENNPA*ETCWCAYSPLY
Trigger: ATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTCATGGGAGGTTGAGACATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 90 bp GGGTCTGGGAGGCCCGCCCGCGCCGCGGAGCCTCGGAGGAAGGTCTaGAGCCGGGGCGGCCGTACCTTGCGTAGGCCACTGAAGGGAACG +
Preference number: 5 (lower is better)
Translates to: GSGRPARAAEPRRKV*SRGGRTLRRPLKGT
Trigger: CGTTCCCTTCAGTGGCCTACGCAAGGTACGGCCGCCCCGGCTCCAGACCTTCCTCCGAGGCTCCGCGGCGCGGGCGGGCCTCCCAGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp GGGGCTGGCGCTGGGCTGGACCGGGGCTCATCTGCAGCCCTCACGCTCTCCTCGTCTGGCGGCCCGCGCTaGCTCAGGCTGGAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: GAGAGLDRGSSAALTLSSSGGPR*LRLERV
Trigger: GACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGA...CGAGGAGAGCGTGAGGGCTGCAGATGAGCCCCGGTCCAGCCCAGCGCCAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS TCA 90 bp GCGCGCGGCCATGCGGAAGGTGAGCGCTTTGGAGGCGTCGTAGACTaGGACCGGCCCGCCCGCCGCGCACCAGGAGCGCACCTCATGCCG +
Preference number: 5 (lower is better)
Translates to: ARGHAEGERFGGVVD*DRPARRAPGAHLMP
Trigger: CGGCATGAGGTGCGCTCCTGGTGCGCGGCGGGCGGGCCGGTCTCAGTCTACGACGCCTCCAAAGCGCTCACCTTCCGCATGGCCGCGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 90 bp TTGCGCCGCCGCCGGTGCGGCTCGCCGACCGCACCTAGCAGTGTGTaGGAGCCCAGCAGGATGTGCGCACTCTGCGGCCACTGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: LRRRRCGSPTAPSSV*EPSRMCALCGHWLR
Trigger: GCGCAGCCAGTGGCCGCAGAGTGCGCACATCCTGCTGGGCTCGCACACACTGCTAGGTGCGGTCGGCGAGCCGCACCGGCGGCGGCGCAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS TCA 90 bp CGTCCAGCCGCAACCCCAGCAGGATGCGCGCGGCCATGCGGAAGGTaGGCGCTTTGGAGGCGTCGTAGACTGAGACCGGCCCGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: RPAATPAGCARPCGR*ALWRRRRLRPARPP
Trigger: CGGCGGGCGGGCCGGTCTCAGTCTACGACGCCTCCAAAGCGCTCACCTTCCGCATGGCCGCGCGCATCCTGCTGGGGTTGCGGCTGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp CGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCAAAGCCAGGCCAGGGTaGCGCCCACGGCGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: RDATMGSGRWVALRARHSKARPG*RPRRAR
Trigger: GCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTT...GCTATGGCGCGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 90 bp CCTGGCTCCTGGGCCCAAATGCCAGTCCCTCTCGAAGGTGCCTGCTaGCTCGGGAACGCTCACTCCCGGCTCCGCGGGGCACCTCCCACC +
Preference number: 5 (lower is better)
Translates to: PGSWAQMPVPLEGAC*LGNAHSRLRGAPPT
Trigger: GGTGGGAGGTGCCCCGCGGAGCCGGGAGTGAGCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 90 bp AGGTTCTCCACGAGCTGCTCGAAGGTCCGGGCCAGCGTGGCGCACTaGGCCTCGTCCAGCCGCAACCCCAGCAGGATGCGCGCGGCCATG +
Preference number: 5 (lower is better)
Translates to: RFSTSCSKVRASVAH*ASSSRNPSRMRAAM
Trigger: CATGGCCGCGCGCATCCTGCTGGGGTTGCGGCTGGACGAGGCGCAGTGCGCCACGCTGGCCCGGACCTTCGAGCAGCTCGTGGAGAACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp AGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGCAGCTGGAGCACGGCTaGCGCCAGCTCCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: SGGSPSSFLESGTHPRLAQLEHG*RQLLAE
Trigger: CTCGGCCAGGAGCTGGCGCAAGCCGTGCTCCAGCTG...CGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GACCCCAAACTCTGGCGGCCCGCGCTTGCTCAGGCTGGAGCGCGTCGCGGCAGGGCTTCCTTACAAGGGTaGCAGGTCCCACCGCGTGCG +
Preference number: 5 (lower is better)
Translates to: DPKLWRPALAQAGARRGRASLQG*QVPPRA
Trigger: CGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGC...CCTGCCGCGACGCGCTCCAGCCTGAGCAAGCGCGGGCCGCCAGAGTTTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS GCA 90 bp TTTCCTGGCTCCTGGGCCCAAATGCCAGTCCCTCTCGAAGGTGCCTaGTGCCTCGGGAACGCTCACTCCCGGCTCCGCGGGGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: FPGSWAQMPVPLEGA*CLGNAHSRLRGAPP
Trigger: GGGAGGTGCCCCGCGGAGCCGGGAGTGAGCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 90 bp GTGAGAAGAGGTTCTCCACGAGCTGCTCGAAGGTCCGGGCCAGCGTaGCGCACTGCGCCTCGTCCAGCCGCAACCCCAGCAGGATGCGCG +
Preference number: 5 (lower is better)
Translates to: VRRGSPRAARRSGPA*RTAPRPAATPAGCA
Trigger: CGCGCATCCTGCTGGGGTTGCGGCTGGACGAGGCGCAGTGCGCCACGCTGGCCCGGACCTTCGAGCAGCTCGTGGAGAACCTCTTCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCTTGCCCGGATGCCCTaGCGTAGGCCACTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: EWARDATMGSGRWVALRALARMP*RRPLKG
Trigger: TCCCTTCAGTGGCCTACGCAAGGGCATCCGGGCAAG...CGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CAA 90 bp AAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACAAAGCCAGGCCAGGGTaGCGCCCACGGCGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: KCPQLLVSAETGRVAKAHKARPG*RPRRAR
Trigger: GCGGGCACGCCGTGGGCGCAACCCTGGCCTGGCTTT...GTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 90 bp ACTTTTTCCTGGCTCCTGGGCCCAAATGCCAGTCCCTCTCGAAGGTaGCTGCTGCCTCGGGAACGCTCACTCCCGGCTCCGCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: TFSWLLGPNASPSRR*LLPRERSLPAPRGT
Trigger: GGTGCCCCGCGGAGCCGGGAGTGAGCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGGAAAAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GAGTGGGCGCGCGACGCTACAATGGGGAGCGGCAGATGGGTGGCGCTGCGTGCGCTCTTGCCCCTCATCTaGAGGACTGCCTGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: EWARDATMGSGRWVALRALLPLI*RTACAS
Trigger: TGAGGCACAGGCAGTCCTCAAGATGAGGGGCAAGAG...CGCACGCAGCGCCACCCATCTGCCGCTCCCCATTGTAGCGTCGCGCGCCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp CACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGCGTGAGCTCCTCCCGAATCTaGGCGATGGCCGCCGGATGC +
Preference number: 5 (lower is better)
Translates to: HEARRQLPEGLPSGILCVSSSRI*AMAAGC
Trigger: GCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCT...CACGCAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 90 bp CTGAAGGGAACGTCCAGAGGCAGTGAGAAGAGGTTCTCCACGAGCTaGTCGAAGGTCCGGGCCAGCGTGGCGCACTGCGCCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LKGTSRGSEKRFSTS*SKVRASVAHCASSS
Trigger: GCTGGACGAGGCGCAGTGCGCCACGCTGGCCCGGACCTTCGAGCAGCTCGTGGAGAACCTCTTCTCACTGCCTCTGGACGTTCCCTTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 90 bp GTGCCTTCCTCGAGGCCGGCACGCTCAGGACTTTTTCCTGGCTCCTaGGCCCAAATGCCAGTCCCTCTCGAAGGTGCCTGCTGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: VPSSRPARSGLFPGS*AQMPVPLEGACCLG
Trigger: CCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGGAAAAAGTCCTGAGCGTGCCGGCCTCGAGGAAGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GCAGCCATCTGGGCTTCCGAAGAGGTGATGGAGGCCGGCCCCAGGGGCGCCGCTAGCAACTCACCAGTGTaGCCAACCTGGTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: AAIWASEEVMEAGPRGAASNSPV*PTWSAD
Trigger: GTCTGCAGACCAGGTTGGCAACACTGGTGAGTTGCT...AGCGGCGCCCCTGGGGCCGGCCTCCATCACCTCTTCGGAAGCCCAGATGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp GGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGTGTCCTATCAGGCTGGGGTACCTaGATGCACCCAGCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: GRWVALRARHSHRPSRVLSGWGT*MHPAKL
Trigger: GAGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGA...TAGGACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp GCTTGGCCCACGACATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCAGCTGGAGCACGGCTaGCGCCAGCTCCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: AWPTTFSFLWARSAEGIFQLEHG*RQLLAE
Trigger: CTCGGCCAGGAGCTGGCGCAAGCCGTGCTCCAGCTG...GAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATGTCGTGGGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp CCGACCGACTGGCAGGACGCCTGCCACCGAGACCCCAAACTCTGGCGGCCCGCGAGCGTTGGAGACGTGTaGGTGTGCCTATTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PTDWQDACHRDPKLWRPASVGDV*VCLFSS
Trigger: AGAGGAGAATAGGCACACCAACACGTCTCCAACGCT...CGCGGGCCGCCAGAGTTTGGGGTCTCGGTGGCAGGCGTCCTGCCAGTCGGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS GCA 90 bp CGAGGCCGGCACGCTCAGGACTTTTTCCTGGCTCCTGGGCCCAAATaGCAGTCCCTCTCGAAGGTGCCTGCTGCCTCGGGAACGCTCACT +
Preference number: 5 (lower is better)
Translates to: RGRHAQDFFLAPGPK*QSLSKVPAASGTLT
Trigger: AGTGAGCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGGAAAAAGTCCTGAGCGTGCCGGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GCTTCCTTACAAGGGTTGCAGGTCCCACCGCGTGCGTCGGGTCTCTGCAATGTCCGGGGCGGCCGTACCTaGCGTAGGCCACTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: ASLQGLQVPPRASGLCNVRGGRT*RRPLKG
Trigger: TCCCTTCAGTGGCCTACGCAAGGTACGGCCGCCCCG...GACATTGCAGAGACCCGACGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp GGCGCACGAAGCCAGACGCCAGCTGCCAGAGGGCCTTCCGTCAGGCATCCTCTGTGGAAGTGCCCACAGTaGCTAGTTTCCGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: GARSQTPAARGPSVRHPLWKCPQ*LVSAET
Trigger: GGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCA...CAGAGGATGCCTGACGGAAGGCCCTCTGGCAGCTGGCGTCTGGCTTCGTGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp AGGCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCCAGAATCCGGTGACCTaGAGCCCTTTCGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RPGLRPRRARFLTRVAGPQNPVT*SPFEPG
Trigger: TCCAGGCTCGAAAGGGCTCAAGGTCACCGGATTCTG...GGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GCCAGGGTTGCGCCCACGGCGTGCCCGCTTCCTTACAAGGGTTGCAGGTCCCACCAGAATCCGGTGACCTaGAGCCCTTTCGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ARVAPTACPLPYKGCRSHQNPVT*SPFEPG
Trigger: TCCAGGCTCGAAAGGGCTCAAGGTCACCGGATTCTG...GTGGGACCTGCAACCCTTGTAAGGAAGCGGGCACGCCGTGGGCGCAACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 90 bp AGGGAACGTGCCTTCCTCGAGGCCGGCACGCTCAGGACTTTTTCCTaGCTCCTGGGCCCAAATGCCAGTCCCTCTCGAAGGTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: RERAFLEAGTLRTFS*LLGPNASPSRRCLL
Trigger: CAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGGAAAAAGTCCTGAGCGTGCCGGCCTCGAGGAAGGCACGTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 90 bp CATCACCCGGCTCTGCAGCCTTGTCCTCGTGAAGCTTCTCAGAAATaGCCCCCTCCAGGTGCCGATGCAGCTGGTCCCTTGCCCGGATGC +
Preference number: 5 (lower is better)
Translates to: HHPALQPCPREASQK*PPPGADAAGPLPGC
Trigger: GCATCCGGGCAAGGGACCAGCTGCATCGGCACCTGGAGGGGGCCATTTCTGAGAAGCTTCACGAGGACAAGGCTGCAGAGCCGGGTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CAA 90 bp GGCAGATGGGTGGCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGTGTCCTATCCCTCCATTCCTGCTaGGCCCACGACATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: GRWVALRARHSHRPSRVLSLHSC*AHDIFL
Trigger: AAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGA...TAGGACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGCCACCCATCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCCACCCCTGCACCCTCCCTGGATaGGCTCGGGAAGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VGSLQCPRVAIFPLPCHPCTLPG*AREGEA
Trigger: GGCTTCCCCTTCCCGAGCCAATCCAGGGAGGGTGCA...GGGGTGGCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp TCGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCGCTTCCTTACAAGGGTaGCAGGTCCCACCGCGTGCG +
Preference number: 5 (lower is better)
Translates to: SSLEVPTVASFRRDRQSGASLQG*QVPPRA
Trigger: CGCACGCGGTGGGACCTGCAACCCTTGTAAGGAAGC...GCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GCGCTGCGTGCGCGCCATAGCCACCGGCCAAGCCGTGTCCTAGAGCGCAAGCATTCCCTCCATTCCTGCTaGGCCCACGACATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: ALRARHSHRPSRVLERKHSLHSC*AHDIFL
Trigger: AAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGA...ATGCTTGCGCTCTAGGACACGGCTTGGCCGGTGGCTATGGCGCGCACGCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS TCA 90 bp GCTCCTGCATGGAGGGCTCATGGCCCAGCTCCCTTGCACTGTGAATaGTTAGGTCGAGGGCATCACCCGGCTCTGCAGCCTTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: APAWRAHGPAPLHCE*LGRGHHPALQPCPR
Trigger: ACGAGGACAAGGCTGCAGAGCCGGGTGATGCCCTCGACCTAATCATTCACAGTGCAAGGGAGCTGGGCCATGAGCCCTCCATGCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CAA 90 bp AGCGGTGGCTCGCCCTCCTCCTTCCTCGAGTCCGGCACACATCCGCGTTTGGCGGAAAATAATCCAGCGTaGGAGACGTGTTGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: SGGSPSSFLESGTHPRLAENNPA*ETCWCA
Trigger: GGCACACCAACACGTCTCCAACGCTGGATTATTTTC...CGCCAAACGCGGATGTGTGCCGGACTCGAGGAAGGAGGAGGGCGAGCCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS TCA 90 bp ATGATTAGGTCGAGGGCATCACCCGGCTCTGCAGCCTTGTCCTCGTaGAGCTTCTCAGAAATGGCCCCCTCCAGGTGCCGATGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: MIRSRASPGSAALSS*SFSEMAPSRCRCSW
Trigger: CCAGCTGCATCGGCACCTGGAGGGGGCCATTTCTGAGAAGCTTCACGAGGACAAGGCTGCAGAGCCGGGTGATGCCCTCGACCTAATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS TCA 90 bp TTCAGCTCCTGCATGGAGGGCTCATGGCCCAGCTCCCTTGCACTGTaGATGATTAGGTCGAGGGCATCACCCGGCTCTGCAGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: FSSCMEGSWPSSLAL*MIRSRASPGSAALS
Trigger: GGACAAGGCTGCAGAGCCGGGTGATGCCCTCGACCTAATCATTCACAGTGCAAGGGAGCTGGGCCATGAGCCCTCCATGCAGGAGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS GCA 90 bp AGGAGGGCGAAAGAAGAGCAACTCACCAGTGTTGCCAACCTGGTCTaGAGACCCCCGCCCCACCTGTCCCTCCTCCAGTCGTTTAACCCT +
Preference number: 5 (lower is better)
Translates to: RRAKEEQLTSVANLV*RPPPHLSLLQSFNP
Trigger: AGGGTTAAACGACTGGAGGAGGGACAGGTGGGGCGGGGGTCTGCAGACCAGGTTGGCAACACTGGTGAGTTGCTCTTCTTTCGCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS CCA 90 bp GCGCGAGCAGTGCGCAGTGCTCACCTGTTCCGTCCGCAAAAGGCCTaGGGTTTGGGGGCAAAGCCCGAGATTTATAAGCTCAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: ARAVRSAHLFRPQKA*GLGAKPEIYKLRPE
Trigger: TTCTGGCCTGAGCTTATAAATCTCGGGCTTTGCCCCCAAACCCCAGGCCTTTTGCGGACGGAACAGGTGAGCACTGCGCACTGCTCGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GCATGTCAGAGGCATAGCCCATTCCCCGCAACCGAAGGCGTGAGGGGGTGGAAATGGAAGTGCCCACAGTaGCTAGTTTCCGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: ACQRHSPFPATEGVRGWKWKCPQ*LVSAET
Trigger: GGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCA...TTTCCACCCCCTCACGCCTTCGGTTGCGGGGAATGGGCTATGCCTCTGACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp CATTTTCCTTCCTCTGGGCGCGGAGCGCAGAAGGCATCTTCCCATGGGCTTAGAGATGCAGCTGGTCCCTaGCCCGGATGCCCTTGCGTA +
Preference number: 5 (lower is better)
Translates to: HFPSSGRGAQKASSHGLRDAAGP*PGCPCV
Trigger: TACGCAAGGGCATCCGGGCAAGGGACCAGCTGCATC...TCTAAGCCCATGGGAAGATGCCTTCTGCGCTCCGCGCCCAGAGGAAGGAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS-3UTR CAA 90 bp AAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAGGCGCACTGCAATGTCCCCGAGTaGCAATATTCCCACTCCCCT +
Preference number: 5 (lower is better)
Translates to: KCPQLLVSAETGRVAKAHCNVPE*QYSHSP
Trigger: AGGGGAGTGGGAATATTGCAACTCGGGGACATTGCA...GTGCGCCTTGGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 90 bp CTCAGGCCAGAACTCTGTTCTAAAAACAGACGGACGGTGAAAGACTaGAGTGACCGTGCGCCCTTAGGGAACGTGCCTTCCTCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: LRPELCSKNRRTVKD*SDRAPLGNVPSSRP
Trigger: CGGCCTCGAGGAAGGCACGTTCCCTAAGGGCGCACGGTCACTGCAGTCTTTCACCGTCCGTCTGTTTTTAGAACAGAGTTCTGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GCGTGCGTCGGGTCTCTGCAATGTCCCCGAGTTGCAATATTCCCACTCCCCTGCAGAGAGGTCAAGCAATaGCCCAGAGTCACACAGCTG +
Preference number: 5 (lower is better)
Translates to: ACVGSLQCPRVAIFPLPCREVKQ*PRVTQL
Trigger: CAGCTGTGTGACTCTGGGCAATTGCTTGACCTCTCT...GCAGGGGAGTGGGAATATTGCAACTCGGGGACATTGCAGAGACCCGACGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp GCGCAGCACCTCCTTGACCACGCAGTCGACGTAGCGCAGACGGCCCAGCGCCGCTTGGCCTTCCTATTTTaGGTACAAATATCTCAAACC +
Preference number: 5 (lower is better)
Translates to: AQHLLDHAVDVAQTAQRRLAFLF*VQISQT
Trigger: GGTTTGAGATATTTGTACCAAAAATAGGAAGGCCAA...GCGGCGCTGGGCCGTCTGCGCTACGTCGACTGCGTGGTCAAGGAGGTGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp CCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTCGGGCTCAGCACCCTTaGGATAGAAGAAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PFPCTRLRLGYLDAPSKARAQHP*DRRREG
Trigger: TCCTTCCCTTCTTCTATCCAAAGGGTGCTGAGCCCG...AGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp GCTCTGGGGATGCAGCATTGGTGTAGGGACCTGCCAGAAAACCTTCTCAGCACTGCTAGGGTCAGCCCATaGCCCTTTCCCTGTACTAGG +
Preference number: 5 (lower is better)
Translates to: ALGMQHWCRDLPENLLSTARVSP*PFPCTR
Trigger: CCTAGTACAGGGAAAGGGCAATGGGCTGACCCTAGC...AGTGCTGAGAAGGTTTTCTGGCAGGTCCCTACACCAATGCTGCATCCCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp CCCTTTCCCTGTACTAGGCTCAGGCTGGGGTACCTTGATGCACCCAGCAAAGCTAACCCAGGTCTCCTCTaGCCCCTCATCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: PFPCTRLRLGYLDAPSKANPGLL*PLILRT
Trigger: AGTCCTCAAGATGAGGGGCAAGAGGAGACCTGGGTT...AGCTTTGCTGGGTGCATCAAGGTACCCCAGCCTGAGCCTAGTACAGGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp AAGCCAAGCAGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCGGGCTCAGCACCCTTaGGATAGAAGAAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: KPSSTSWGSIYSLHSCLARAQHP*DRRREG
Trigger: TCCTTCCCTTCTTCTATCCAAAGGGTGCTGAGCCCG...GGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCTGCTTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp TCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACTGCACCCTCCCTGGATaGGCTCGGGAAGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SSPAHIRVWRTFVERLLNCTLPG*AREGEA
Trigger: GGCTTCCCCTTCCCGAGCCAATCCAGGGAGGGTGCA...GTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp CGAGCCTGGAAGTGCCCACAGTTGCTAGTTTCCGCCGAGACCGGCAGAGTGGCCAAACATCATTCTGTCTaGATTATCACAATCCCCCTC +
Preference number: 5 (lower is better)
Translates to: RAWKCPQLLVSAETGRVAKHHSV*IITIPL
Trigger: GAGGGGGATTGTGATAATCAAGACAGAATGATGTTT...GGCCACTCTGCCGGTCTCGGCGGAAACTAGCAACTGTGGGCACTTCCAGGCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp GTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTCCTTCCAGCAACTCACCAGTGTaGCCAACCTGGTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: VGIYLFPPFLLGPRHFPSSNSPV*PTWSAD
Trigger: GTCTGCAGACCAGGTTGGCAACACTGGTGAGTTGCT...GGAAGGAAAATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GAAAATAATCCAGCGTTGGAGACGTGTTGGTGTGCCTATTCTCCTCTGTATACAAGCTCCTCCCGAATCTaGGCGATGGCCGCCGGATGC +
Preference number: 5 (lower is better)
Translates to: ENNPALETCWCAYSPLYTSSSRI*AMAAGC
Trigger: GCATCCGGCGGCCATCGCCAAGATTCGGGAGGAGCT...TGTATACAGAGGAGAATAGGCACACCAACACGTCTCCAACGCTGGATTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp GTGGCTGAGTCATTACTGGAACCCAGGTCTCCTCTTGCCCCTCATCTTGAGGACACTGTAATTCAGCACTaGAGTTCCATAGTCGGAGGA +
Preference number: 5 (lower is better)
Translates to: VAESLLEPRSPLAPHLEDTVIQH*SSIVGG
Trigger: TCCTCCGACTATGGAACTCAAGTGCTGAATTACAGT...GTCCTCAAGATGAGGGGCAAGAGGAGACCTGGGTTCCAGTAATGACTCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS-3UTR CAA 90 bp TCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACTGCAATGTCCCCGAGTaGCAATATTCCCACTCCCCT +
Preference number: 5 (lower is better)
Translates to: SSPAHIRVWRTFVERLLNCNVPE*QYSHSP
Trigger: AGGGGAGTGGGAATATTGCAACTCGGGGACATTGCA...GTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp TCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACAGCGTTGGAGACGTGTaGGTGTGCCTATTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSPAHIRVWRTFVERLLNSVGDV*VCLFSS
Trigger: AGAGGAGAATAGGCACACCAACACGTCTCCAACGCT...GTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp TCGAGTCCGGCACACATCCGCGTTTGGCGAACATTTGTTGAAAGATTGTTGAACGAAAATAATCCAGCGTaGGAGACGTGTTGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: SSPAHIRVWRTFVERLLNENNPA*ETCWCA
Trigger: GGCACACCAACACGTCTCCAACGCTGGATTATTTTC...GTTCAACAATCTTTCAACAAATGTTCGCCAAACGCGGATGTGTGCCGGACTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS-3UTR CAA 90 bp AGCACCTCGTGGGGATCTATCTATTCCCTCCATTCCTGCTTGGCCCACGACATTTTGGCCTTCCTATTTTaGGTACAAATATCTCAAACC +
Preference number: 5 (lower is better)
Translates to: STSWGSIYSLHSCLAHDILAFLF*VQISQT
Trigger: GGTTTGAGATATTTGTACCAAAAATAGGAAGGCCAA...AATGTCGTGGGCCAAGCAGGAATGGAGGGAATAGATAGATCCCCACGAGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 72 bp AGGCCCGCCCGCGCCGCGGAGCCTCGGAGGAAGGTCTaGAGCCGGGGCGGCCGTACCTTGCGTAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: RPARAAEPRRKV*SRGGRTLRRPL
Trigger: CAGTGGCCTACGCAAGGTACGGCCGCCCCGGCTCCAGACCTTCCTCCGAGGCTCCGCGGCGCGGGCGGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS GCA 72 bp CGCCGGTGCGGCTCGCCGACCGCACCTAGCAGTGTGTaGGAGCCCAGCAGGATGTGCGCACTCTGCGGCCAC +
Preference number: 6 (lower is better)
Translates to: RRCGSPTAPSSV*EPSRMCALCGH
Trigger: GTGGCCGCAGAGTGCGCACATCCTGCTGGGCTCGCACACACTGCTAGGTGCGGTCGGCGAGCCGCACCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 72 bp ACGAGCTGCTCGAAGGTCCGGGCCAGCGTGGCGCACTaGGCCTCGTCCAGCCGCAACCCCAGCAGGATGCGC +
Preference number: 6 (lower is better)
Translates to: TSCSKVRASVAH*ASSSRNPSRMR
Trigger: GCGCATCCTGCTGGGGTTGCGGCTGGACGAGGCGCAGTGCGCCACGCTGGCCCGGACCTTCGAGCAGCTCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS TCA 72 bp CATGCGGAAGGTGAGCGCTTTGGAGGCGTCGTAGACTaGGACCGGCCCGCCCGCCGCGCACCAGGAGCGCAC +
Preference number: 6 (lower is better)
Translates to: HAEGERFGGVVD*DRPARRAPGAH
Trigger: GTGCGCTCCTGGTGCGCGGCGGGCGGGCCGGTCTCAGTCTACGACGCCTCCAAAGCGCTCACCTTCCGCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 72 bp GGTTCTCCACGAGCTGCTCGAAGGTCCGGGCCAGCGTaGCGCACTGCGCCTCGTCCAGCCGCAACCCCAGCA +
Preference number: 6 (lower is better)
Translates to: GSPRAARRSGPA*RTAPRPAATPA
Trigger: TGCTGGGGTTGCGGCTGGACGAGGCGCAGTGCGCCACGCTGGCCCGGACCTTCGAGCAGCTCGTGGAGAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 72 bp TGGGCCCAAATGCCAGTCCCTCTCGAAGGTGCCTGCTaGCTCGGGAACGCTCACTCCCGGCTCCGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: WAQMPVPLEGAC*LGNAHSRLRGA
Trigger: TGCCCCGCGGAGCCGGGAGTGAGCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 72 bp TGGCTCCTGGGCCCAAATGCCAGTCCCTCTCGAAGGTaGCTGCTGCCTCGGGAACGCTCACTCCCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: WLLGPNASPSRR*LLPRERSLPAP
Trigger: CGGAGCCGGGAGTGAGCGTTCCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CAA 72 bp CCTCGGAGGAAGGTCTGGAGCCGGGGCGGCCGTACCTaGCGTAGGCCACTGAAGGGAACGTCCAGAGGCAGT +
Preference number: 6 (lower is better)
Translates to: PRRKVWSRGGRT*RRPLKGTSRGS
Trigger: ACTGCCTCTGGACGTTCCCTTCAGTGGCCTACGCAAGGTACGGCCGCCCCGGCTCCAGACCTTCCTCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS CCA 72 bp GCCTTCCTCGAGGCCGGCACGCTCAGGACTTTTTCCTaGCTCCTGGGCCCAAATGCCAGTCCCTCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: AFLEAGTLRTFS*LLGPNASPSRR
Trigger: CCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGGAAAAAGTCCTGAGCGTGCCGGCCTCGAGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS CCA 72 bp TTCTCAGAAATGGCCCCCTCCAGGTGCCGATGCAGCTaGTCCCTTGCCCGGATGCCCTTGCGTAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: FSEMAPSRCRCS*SLARMPLRRPL
Trigger: CAGTGGCCTACGCAAGGGCATCCGGGCAAGGGACCAGCTGCATCGGCACCTGGAGGGGGCCATTTCTGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS TCA 72 bp TCTGGAGCCGGGGCGGCCGTACCTTGCGTAGGCCACTaGAGGGAACGTCCAGAGGCAGTGAGAAGAGGTTCT +
Preference number: 6 (lower is better)
Translates to: SGAGAAVPCVGH*RERPEAVRRGS
Trigger: AGAACCTCTTCTCACTGCCTCTGGACGTTCCCTTCAGTGGCCTACGCAAGGTACGGCCGCCCCGGCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624358.3
CDS GCA 72 bp CACGCTCAGGACTTTTTCCTGGCTCCTGGGCCCAAATaGCAGTCCCTCTCGAAGGTGCCTGCTGCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: HAQDFFLAPGPK*QSLSKVPAASG
Trigger: TCCCGAGGCAGCAGGCACCTTCGAGAGGGACTGGCATTTGGGCCCAGGAGCCAGGAAAAAGTCCTGAGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS TCA 72 bp GCTGGTCCCTTGCCCGGATGCCCTTGCGTAGGCCACTaGAGGGAACGTCCAGAGGCAGTGAGAAGAGGTTCT +
Preference number: 6 (lower is better)
Translates to: AGPLPGCPCVGH*RERPEAVRRGS
Trigger: AGAACCTCTTCTCACTGCCTCTGGACGTTCCCTTCAGTGGCCTACGCAAGGGCATCCGGGCAAGGGACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS TCA 72 bp TGGAGGGCTCATGGCCCAGCTCCCTTGCACTGTGAATaGTTAGGTCGAGGGCATCACCCGGCTCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: WRAHGPAPLHCE*LGRGHHPALQP
Trigger: AGGCTGCAGAGCCGGGTGATGCCCTCGACCTAATCATTCACAGTGCAAGGGAGCTGGGCCATGAGCCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS GCA 72 bp AAAGAAGAGCAACTCACCAGTGTTGCCAACCTGGTCTaGAGACCCCCGCCCCACCTGTCCCTCCTCCAGTCG +
Preference number: 6 (lower is better)
Translates to: KEEQLTSVANLV*RPPPHLSLLQS
Trigger: CGACTGGAGGAGGGACAGGTGGGGCGGGGGTCTGCAGACCAGGTTGGCAACACTGGTGAGTTGCTCTTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS CAA 72 bp AGGGAAGGAGGGCGAAAGAAGAGCAACTCACCAGTGTaGCCAACCTGGTCTGCAGACCCCCGCCCCACCTGT +
Preference number: 6 (lower is better)
Translates to: REGGRKKSNSPV*PTWSADPRPTC
Trigger: ACAGGTGGGGCGGGGGTCTGCAGACCAGGTTGGCAACACTGGTGAGTTGCTCTTCTTTCGCCCTCCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS TCA 72 bp TGCATGGAGGGCTCATGGCCCAGCTCCCTTGCACTGTaGATGATTAGGTCGAGGGCATCACCCGGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: CMEGSWPSSLAL*MIRSRASPGSA
Trigger: TGCAGAGCCGGGTGATGCCCTCGACCTAATCATTCACAGTGCAAGGGAGCTGGGCCATGAGCCCTCCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651965.1
CDS CCA 72 bp GTGCGCAGTGCTCACCTGTTCCGTCCGCAAAAGGCCTaGGGTTTGGGGGCAAAGCCCGAGATTTATAAGCTC +
Preference number: 6 (lower is better)
Translates to: VRSAHLFRPQKA*GLGAKPEIYKL
Trigger: GAGCTTATAAATCTCGGGCTTTGCCCCCAAACCCCAGGCCTTTTGCGGACGGAACAGGTGAGCACTGCGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1
CDS GCA 72 bp GAACTCTGTTCTAAAAACAGACGGACGGTGAAAGACTaGAGTGACCGTGCGCCCTTAGGGAACGTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ELCSKNRRTVKD*SDRAPLGNVPS
Trigger: GGAAGGCACGTTCCCTAAGGGCGCACGGTCACTGCAGTCTTTCACCGTCCGTCTGTTTTTAGAACAGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624358.3
ENST00000651965.1