RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP26B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000003137

Ensembl transcript IDs: ENST00000001146.7, ENST00000412253.1, ENST00000461519.1, ENST00000474509.1, ENST00000546307.5

Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGGCCCTaGAATCAGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCC +
Preference number: 1 (lower is better)
Translates to: AAAAFPQLSGDHTGP*NQLRGRTAAALTSP
Trigger: GGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCTGATTGCAGGGCCCTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 90 bp GTCCGGAGACCACACAGGGCCCTGCAATCAGCTCCGAGGCAGAACTaGCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCACCC +
Preference number: 1 (lower is better)
Translates to: VRRPHRALQSAPRQN*RCAHLPHAFASSPP
Trigger: GGGTGGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCTGATTGCAGGGCCCTGTGTGGTCTCCGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 90 bp GAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTaGCTCCTGTTCTGCTACCCAGGATGCTGTTCCTGGGCAGACGCA +
Preference number: 1 (lower is better)
Translates to: EGQSPGWTQPPPRQG*LLFCYPGCCSWADA
Trigger: TGCGTCTGCCCAGGAACAGCATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 90 bp TCTGTGGGGCTGCCTACGGGATCTGGTCTGAGGGAGCCACTGAGGTaGTCACAGCAGCGATCGGGGACTGGCATGTCCTTCATTCTTCTG +
Preference number: 1 (lower is better)
Translates to: SVGLPTGSGLREPLR*SQQRSGTGMSFILL
Trigger: CAGAAGAATGAAGGACATGCCAGTCCCCGATCGCTGCTGTGAGCACCTCAGTGGCTCCCTCAGACCAGATCCCGTAGGCAGCCCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CCA 90 bp CCGTATCCTTCCCCATACTCACGCCTGGAGTCAGGGCCAGTGCACTaGGGTGAACAGGGGCCAAACAGGAAATCGTGGCCGCCTCCAAAT +
Preference number: 1 (lower is better)
Translates to: PYPSPYSRLESGPVH*GEQGPNRKSWPPPN
Trigger: ATTTGGAGGCGGCCACGATTTCCTGTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGGGGAAGGATACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 90 bp TTTCACCCAGTCATCCCGACTGGCCAGTTTTCAACCCAATCCCCCTaGCAAACCGCACGTAGCCGCCTCTTCAGCTTCAGCTGCGGCAGC +
Preference number: 1 (lower is better)
Translates to: FHPVIPTGQFSTQSP*QTARSRLFSFSCGS
Trigger: GCTGCCGCAGCTGAAGCTGAAGAGGCGGCTACGTGCGGTTTGTCAGGGGGATTGGGTTGAAAACTGGCCAGTCGGGATGACTGGGTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 90 bp GGAAGGGAGCAGTTCAGAACATCACAAAAACACTGTAGCACGCGCTaGCACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCC +
Preference number: 1 (lower is better)
Translates to: GREQFRTSQKHCSTR*HLTLSRACRAPATP
Trigger: GGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTGTTTTTGTGATGTTCTGAACTGCTCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CCA 90 bp CCTTCCCCAGGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTaGCAGGAGCTACTCCTCTTTCACCCAGTCATCCCGACTGGCCAG +
Preference number: 1 (lower is better)
Translates to: PSPGGIPNCQHSKRQ*QELLLFHPVIPTGQ
Trigger: CTGGCCAGTCGGGATGACTGGGTGAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCCTGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 90 bp CACGGTGGTGCCCAGAACACAAACGCCAGCGCCCAACATCGAAAGTaGTTCAATCTGCAAGCCCGTGGCAGGAAGAGTTTTGTGGGGTTT +
Preference number: 1 (lower is better)
Translates to: HGGAQNTNASAQHRK*FNLQARGRKSFVGF
Trigger: AAACCCCACAAAACTCTTCCTGCCACGGGCTTGCAGATTGAAGCACTTTCGATGTTGGGCGCTGGCGTTTGTGTTCTGGGCACCACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 90 bp AACAGGAAATCGTGGCCGCCTCCAAATCTACCTGATCAGGGTTTTTaGCAGGAGAGGGAGGAGGCAATGGGCCACATTCCATCTCCACCA +
Preference number: 1 (lower is better)
Translates to: NRKSWPPPNLPDQGF*QEREEAMGHIPSPP
Trigger: TGGTGGAGATGGAATGTGGCCCATTGCCTCCTCCCTCTCCTGTCAAAAACCCTGATCAGGTAGATTTGGAGGCGGCCACGATTTCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCCCCGCTGCCTGGGCTaGGCTGAGGCGGGTGGGTCT +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPPRCLG*AEAGGS
Trigger: AGACCCACCCGCCTCAGCCCAGCCCAGGCAGCGGGG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
71% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCACCACCCCGCTGCCTaGGCTGGGCTGAGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPHHPAA*AGLRRV
Trigger: CACCCGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCAACCACCACCCCGCTaGCTGGGCTGGGCTGAGGCG +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPQPPPR*LGWAEA
Trigger: CGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTGGTTG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGGCATGCAGAGCCCCTaGCACGCCCTTCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHGMQSP*HALPRG
Trigger: GCCCCTGGGAAGGGCGTGGCAGGGGCTCTGCATGCC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCCCCCGCTGCCTGGGCTaGGCTGAGGCGGGTGGGTCT +
Preference number: 2 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPPRCLG*AEAGGS
Trigger: AGACCCACCCGCCTCAGCCCAGCCCAGGCAGCGGGG...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCGGGCAATCTCCAGGTTaGACGCAGCCCCCGCCCCGC +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPGQSPG*TQPPPR
Trigger: GCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCC...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCAACCACCACCCCGCTaGCTGGGCTGGGCTGAGGCG +
Preference number: 2 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFQPPPR*LGWAEA
Trigger: CGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTGGTTG...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGGCATGCAGAGCCCCTaGCACGCCCTTCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFGMQSP*HALPRG
Trigger: GCCCCTGGGAAGGGCGTGGCAGGGGCTCTGCATGCC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACACTGTCACGGGCATaGAGAGCCCCTGCCACGCCC +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHTLSRA*RAPATP
Trigger: GGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGT...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGGAGACGCTGAAGAGTaGGCCCAAGGGGGCACGGCT +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHGDAEE*AQGGTA
Trigger: AGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACCACCACCCCGCTGCCTaGGCTGGGCTGAGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNHHPAA*AGLRRV
Trigger: CACCCGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTG...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACAAGGGAGGGCAAGTATaGGGGCCACTCGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHKGGQV*GPLALP
Trigger: GGGGAGGGCGAGTGGCCCCCATACTTGCCCTCCCTT...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGGGCAATCTCCAGGTTaGACGCAGCCCCCGCCCCGC +
Preference number: 2 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQGQSPG*TQPPPR
Trigger: GCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACCCGCCCCGCCAAGGTTaGCTCCTGTTCTGCTACCCA +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHPPRQG*LLFCYP
Trigger: TGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGG...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCCTGGGGGCTGGGTTTaGCCAGAGACCCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPPGGWV*PETPSS
Trigger: AGAGGAAGGGGTCTCTGGTCAAACCCAGCCCCCAGG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTGCTTTGGGTAGGGTTTaGCAGGGAGGGGGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: GGAGGGDAEECAQGGTALALGRV*QGGGAR
Trigger: CCTTGCTCCCCCTCCCTGGCAAACCCTACCCAAAGC...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCAGGTGGGGGTGTCAGTaGACCTGCCCAGGGCCACCA +
Preference number: 2 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFRWGCQ*TCPGPP
Trigger: TGGTGGCCCTGGGCAGGTGCACTGACACCCCCACCT...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCAAGGGAGGGCAAGTATaGGGGCCACTCGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFKGGQV*GPLALP
Trigger: GGGGAGGGCGAGTGGCCCCCATACTTGCCCTCCCTT...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGGGGCCCACTGGCTTTaGGTAGGGTTTGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHGAHWL*VGFARE
Trigger: CTCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACGGGCAATCTCCAGGTTaGACGCAGCCCCCGCCCCGC +
Preference number: 2 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNGQSPG*TQPPPR
Trigger: GCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCC...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGGGGCGGGCAGCACATaGGCCGCGGGCCTTAGGCGG +
Preference number: 2 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIGAGST*AAGLRR
Trigger: CCGCCTAAGGCCCGCGGCTCATGTGCTGCCCGCCCC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGGGGGCGGGCAGCACATaGGCCGCGGGCCTTAGGCGG +
Preference number: 2 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEGAGST*AAGLRR
Trigger: CCGCCTAAGGCCCGCGGCTCATGTGCTGCCCGCCCC...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CAA 90 bp GGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTaGACTCCTGTTCTGCTACCCAGGATGCTGTTCCTGGGCAGACGC +
Preference number: 2 (lower is better)
Translates to: GRAISRLDAAPAPPR*TPVLLPRMLFLGRR
Trigger: GCGTCTGCCCAGGAACAGCATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGGGGCGGGCAGCACATaGGCCGCGGGCCTTAGGCGG +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLGAGST*AAGLRR
Trigger: CCGCCTAAGGCCCGCGGCTCATGTGCTGCCCGCCCC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGGCTTTGGGTAGGGTTTaGCAGGGAGGGGGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPALGRV*QGGGAR
Trigger: CCTTGCTCCCCCTCCCTGGCAAACCCTACCCAAAGC...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACACACTGTCACGGGCATaGAGAGCCCCTGCCACGCCC +
Preference number: 2 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNTLSRA*RAPATP
Trigger: GGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGT...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGTGGAGTCAGGGCCAGTaGACTGGGGTGAACAGGGGC +
Preference number: 2 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQWSQGQ*TGVNRG
Trigger: GCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCA...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACAGGAATGGGGCCCACTaGCTTTGGGTAGGGTTTGCC +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHRNGAH*LWVGFA
Trigger: GGCAAACCCTACCCAAAGCCAGTGGGCCCCATTCCT...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCAGGAATGGGGCCCACTaGCTTTGGGTAGGGTTTGCC +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPRNGAH*LWVGFA
Trigger: GGCAAACCCTACCCAAAGCCAGTGGGCCCCATTCCT...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACCCAGGATGCTGTTCCTaGGCAGACGCAGTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNPGCCS*ADAVGA
Trigger: CGCCCCCACTGCGTCTGCCCAGGAACAGCATCCTGG...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACTGGTGAGGGAGGGTaGGAACCGTGGCATAGGGAA +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHTGEGG*EPWHRE
Trigger: TTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGT...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCAATTGTCCAAACTGGTaGGGGAGGGTGGGAACCGTG +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPNCPNW*GRVGTV
Trigger: CACGGTTCCCACCCTCCCTCACCAGTTTGGACAATT...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACCCTGGGGGCTGGGTTTaGCCAGAGACCCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNPGGWV*PETPSS
Trigger: AGAGGAAGGGGTCTCTGGTCAAACCCAGCCCCCAGG...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCAACCACCACCCCGCTaGCTGGGCTGGGCTGAGGCG +
Preference number: 2 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIQPPPR*LGWAEA
Trigger: CGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTGGTTG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCCCCATACTCACGCCTaGAGTCAGGGCCAGTGCACT +
Preference number: 2 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQPHTHA*SQGQCT
Trigger: AGTGCACTGGCCCTGACTCCAGGCGTGAGTATGGGG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACGCCCTTCCCAGGGGCTaGGCTGATGGTAAATGGGGA +
Preference number: 2 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNALPRG*ADGKWG
Trigger: TCCCCATTTACCATCAGCTCAGCCCCTGGGAAGGGC...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCACTGTAGCACGCGCTaGCACCTAACACTGTCACGG +
Preference number: 2 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDHCSTR*HLTLSR
Trigger: CCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGTTCAACCCTAGGCCCTaGGGGCTGGGTTTGACCAGA +
Preference number: 2 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQFNPRP*GLGLTR
Trigger: TCTGGTCAAACCCAGCCCCCAGGGCCTAGGGTTGAA...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGAATTGTCCAAACTGGTaGGGGAGGGTGGGAACCGTG +
Preference number: 2 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQNCPNW*GRVGTV
Trigger: CACGGTTCCCACCCTCCCTCACCAGTTTGGACAATT...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGGGAGACGCTGAAGAGTaGGCCCAAGGGGGCACGGCT +
Preference number: 2 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEGDAEE*AQGGTA
Trigger: AGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCC...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGGCCTGGGGCTCCTTTaGCCCAAGGTCAGAGGACAG +
Preference number: 2 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSGLGLL*PKVRGQ
Trigger: CTGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGGGGCCCACTGGCTTTaGGTAGGGTTTGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVGAHWL*VGFARE
Trigger: CTCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCC...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCCAGGATGCTGTTCCTaGGCAGACGCAGTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEPGCCS*ADAVGA
Trigger: CGCCCCCACTGCGTCTGCCCAGGAACAGCATCCTGG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCAGGGGATGGGAAGGTaGGGGTGTCAGTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVQGMGR*GCQCTC
Trigger: GCAGGTGCACTGACACCCCCACCTTCCCATCCCCTG...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACCCAAACAGGAAATCGTaGCCGCCTCCAAATCTACCT +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHPNRKS*PPPNLP
Trigger: AGGTAGATTTGGAGGCGGCCACGATTTCCTGTTTGG...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGGGCTAAGCAGACAGTaGCATAGAGGTGGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQGLSRQ*HRGGRD
Trigger: GTCCCTTCCACCTCTATGCCACTGTCTGCTTAGCCC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCCGCCCCGCCAAGGTTaGCTCCTGTTCTGCTACCCA +
Preference number: 2 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPPPRQG*LLFCYP
Trigger: TGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCGCCTCCAAATCTACCTaGTCAGGGTTTTTGACAGGA +
Preference number: 2 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPASKST*SGFLTG
Trigger: TCCTGTCAAAAACCCTGATCAGGTAGATTTGGAGGC...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGCCTCCAAATCTACCTaGTCAGGGTTTTTGACAGGA +
Preference number: 2 (lower is better)
Translates to: AASSASAAAAFPQLSGDHASKST*SGFLTG
Trigger: TCCTGTCAAAAACCCTGATCAGGTAGATTTGGAGGC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCAGGTGGGGGTGTCAGTaGACCTGCCCAGGGCCACCA +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLRWGCQ*TCPGPP
Trigger: TGGTGGCCCTGGGCAGGTGCACTGACACCCCCACCT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCAGGGGATGGGAAGGTaGGGGTGTCAGTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEQGMGR*GCQCTC
Trigger: GCAGGTGCACTGACACCCCCACCTTCCCATCCCCTG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCAAACAGGAAATCGTaGCCGCCTCCAAATCTACCT +
Preference number: 2 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFPNRKS*PPPNLP
Trigger: AGGTAGATTTGGAGGCGGCCACGATTTCCTGTTTGG...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCACTGTAGCACGCGCTaGCACCTAACACTGTCACGG +
Preference number: 2 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSHCSTR*HLTLSR
Trigger: CCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGCCTCCAAATCTACCTaGTCAGGGTTTTTGACAGGA +
Preference number: 2 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFASKST*SGFLTG
Trigger: TCCTGTCAAAAACCCTGATCAGGTAGATTTGGAGGC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCACTGGTGAGGGAGGGTaGGAACCGTGGCATAGGGAA +
Preference number: 2 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVTGEGG*EPWHRE
Trigger: TTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGT...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTTTCAACCCTAGGCCCTaGGGGCTGGGTTTGACCAGA +
Preference number: 2 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSFNPRP*GLGLTR
Trigger: TCTGGTCAAACCCAGCCCCCAGGGCCTAGGGTTGAA...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCACTGTAGCACGCGCTaGCACCTAACACTGTCACGG +
Preference number: 2 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEHCSTR*HLTLSR
Trigger: CCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTCAACCCAATCCCCCTaGCAAACCGCACGTAGCCGC +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLSTQSP*QTARSR
Trigger: GCGGCTACGTGCGGTTTGTCAGGGGGATTGGGTTGA...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCTTCTGCTACCCAGGATaGTGTTCCTGGGCAGACGCA +
Preference number: 2 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVFCYPG*CSWADA
Trigger: TGCGTCTGCCCAGGAACAGCATCCTGGGTAGCAGAA...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGACCACACAGGGCCCTaGAATCAGCTCCGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLDHTGP*NQLRGR
Trigger: TCTGCCTCGGAGCTGATTGCAGGGCCCTGTGTGGTC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAAAGGGAGGGCAAGTATaGGGGCCACTCGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: GRRCSLQTPASPRFSISEKGGQV*GPLALP
Trigger: GGGGAGGGCGAGTGGCCCCCATACTTGCCCTCCCTT...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGTGGTTCAGCAGGGGATaGGAAGGTGGGGGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEWFSRG*EGGGVS
Trigger: ACTGACACCCCCACCTTCCCATCCCCTGCTGAACCA...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTGGTTCAGCAGGGGATaGGAAGGTGGGGGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPWFSRG*EGGGVS
Trigger: ACTGACACCCCCACCTTCCCATCCCCTGCTGAACCA...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGTCAGGGTCGGTCTGTaGGGCTGCCTACGGGATCTG +
Preference number: 2 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPVRVGL*GCLRDL
Trigger: CAGATCCCGTAGGCAGCCCCACAGACCGACCCTGAC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGAATTGTCCAAACTGGTaGGGGAGGGTGGGAACCGTG +
Preference number: 2 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEENCPNW*GRVGTV
Trigger: CACGGTTCCCACCCTCCCTCACCAGTTTGGACAATT...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCCTGATCAGGGTTTTTaGCAGGAGAGGGAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPPDQGF*QEREEA
Trigger: TGCCTCCTCCCTCTCCTGTCAAAAACCCTGATCAGG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGCCAGTGCACTGGGGTaGACAGGGGCCAAACAGGAA +
Preference number: 2 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPASALG*TGAKQE
Trigger: TTCCTGTTTGGCCCCTGTTCACCCCAGTGCACTGGC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCTGGAGTCAGGGCCAGTaGACTGGGGTGAACAGGGGC +
Preference number: 2 (lower is better)
Translates to: ASQIANTQNASGRSYSSFWSQGQ*TGVNRG
Trigger: GCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCA...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGCCCTTCCCAGGGGCTaGGCTGATGGTAAATGGGGA +
Preference number: 2 (lower is better)
Translates to: ASQIANTQNASGRSYSSFALPRG*ADGKWG
Trigger: TCCCCATTTACCATCAGCTCAGCCCCTGGGAAGGGC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCACACAGGCTAGGGCATaGAGGGGAGGAGATGTTCAC +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLTQARA*RGGDVH
Trigger: GTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTCTGCTACCCAGGATaGTGTTCCTGGGCAGACGCA +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLFCYPG*CSWADA
Trigger: TGCGTCTGCCCAGGAACAGCATCCTGGGTAGCAGAA...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCCCCATACTCACGCCTaGAGTCAGGGCCAGTGCACT +
Preference number: 2 (lower is better)
Translates to: ASQIANTQNASGRSYSSFPHTHA*SQGQCT
Trigger: AGTGCACTGGCCCTGACTCCAGGCGTGAGTATGGGG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGGGCTAAGCAGACAGTaGCATAGAGGTGGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLGLSRQ*HRGGRD
Trigger: GTCCCTTCCACCTCTATGCCACTGTCTGCTTAGCCC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CAA 90 bp AGACTCACCAAACGCCCGGAAACCTTCCCCAGGAGGCATCCCAAATaGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: RLTKRPETFPRRHPK*PTLKTPVAGATPLS
Trigger: TGAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCCTGGGGAAGGTTTCCGGGCGTTTGGTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTCCCCGCTGCCTGGGCTaGGCTGAGGCGGGTGGGTCT +
Preference number: 2 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIPRCLG*AEAGGS
Trigger: AGACCCACCCGCCTCAGCCCAGCCCAGGCAGCGGGG...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCAGGAATGGGGCCCACTaGCTTTGGGTAGGGTTTGCC +
Preference number: 2 (lower is better)
Translates to: ASQIANTQNASGRSYSSFRNGAH*LWVGFA
Trigger: GGCAAACCCTACCCAAAGCCAGTGGGCCCCATTCCT...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCTGGTTCAGCAGGGGATaGGAAGGTGGGGGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: ASQIANTQNASGRSYSSFWFSRG*EGGGVS
Trigger: ACTGACACCCCCACCTTCCCATCCCCTGCTGAACCA...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCCCCAGTCATCCCGACTaGCCAGTTTTCAACCCAATC +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLPSHPD*PVFNPI
Trigger: GATTGGGTTGAAAACTGGCCAGTCGGGATGACTGGG...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCAGGGAGCCACTGAGGTaGTCACAGCAGCGATCGGGG +
Preference number: 2 (lower is better)
Translates to: STYCSPRYSVKNNWFRASREPLR*SQQRSG
Trigger: CCCCGATCGCTGCTGTGAGCACCTCAGTGGCTCCCT...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCCCAAACAGGAAATCGTaGCCGCCTCCAAATCTACCT +
Preference number: 2 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLPNRKS*PPPNLP
Trigger: AGGTAGATTTGGAGGCGGCCACGATTTCCTGTTTGG...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCACTTCAGTCCAGGAGTaGGGCTCCGAGATTAAACCC +
Preference number: 2 (lower is better)
Translates to: ASQIANTQNASGRSYSSFTSVQE*GSEIKP
Trigger: GGGTTTAATCTCGGAGCCTCACTCCTGGACTGAAGT...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAGGCATGCAGAGCCCCTaGCACGCCCTTCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISGMQSP*HALPRG
Trigger: GCCCCTGGGAAGGGCGTGGCAGGGGCTCTGCATGCC...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR CAA 90 bp CAAGGTCAGAGGACAGAACAAGTAGCAGCAATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAGGGTGGGAACCGTGGCATAGGGAAG +
Preference number: 2 (lower is better)
Translates to: QGQRTEQVAAIGNFK*SKLVREGGNRGIGK
Trigger: CTTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGTTTGGACAATTTGAAATTACCTATTGCTGCTACTTGTTCTGTCCTCTGACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTACTGGTGAGGGAGGGTaGGAACCGTGGCATAGGGAA +
Preference number: 2 (lower is better)
Translates to: GLSEVPLTALLDTQSKTITGEGG*EPWHRE
Trigger: TTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGT...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCACCCCATACTCACGCCTaGAGTCAGGGCCAGTGCACT +
Preference number: 2 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISPHTHA*SQGQCT
Trigger: AGTGCACTGGCCCTGACTCCAGGCGTGAGTATGGGG...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR-3UTR CCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCGCAGTCTGTGTGGTATaGGCCCGTTCCTATAGTCTA +
Preference number: 2 (lower is better)
Translates to: STYCSPRYSVKNNWFRASAVCVV*ARSYSL
Trigger: TAGACTATAGGAACGGGCCCATACCACACAGACTGC...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAGGGCTAAGCAGACAGTaGCATAGAGGTGGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISGLSRQ*HRGGRD
Trigger: GTCCCTTCCACCTCTATGCCACTGTCTGCTTAGCCC...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGAGAGCAGTCTGTGTaGTATGGGCCCGTTCCTATA +
Preference number: 2 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGEQSV*YGPVPI
Trigger: TATAGGAACGGGCCCATACCACACAGACTGCTCTCC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAACTTCAGTCCAGGAGTaGGGCTCCGAGATTAAACCC +
Preference number: 2 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISTSVQE*GSEIKP
Trigger: GGGTTTAATCTCGGAGCCTCACTCCTGGACTGAAGT...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR-3UTR TCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCCAGTTTAAAGGAAAATaGACCTCCCAGACACTGGTT +
Preference number: 2 (lower is better)
Translates to: STYCSPRYSVKNNWFRASQFKGK*TSQTLV
Trigger: AACCAGTGTCTGGGAGGTTCATTTTCCTTTAAACTG...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR GCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGAGGCATCCCAAATTaGCAACACTCAAAACGCCAG +
Preference number: 2 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGGIPN*QHSKRQ
Trigger: CTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTCTGAGACTCAGGGATTaGAGAGCAGTCTGTGTGGTA +
Preference number: 2 (lower is better)
Translates to: GLSEVPLTALLDTQSKTILRLRD*RAVCVV
Trigger: TACCACACAGACTGCTCTCCAATCCCTGAGTCTCAG...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR TCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAATCTCACTAGAGAGCTaGAAGGAGGGACCAATTACA +
Preference number: 2 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISISLES*KEGPIT
Trigger: TGTAATTGGTCCCTCCTTTCAGCTCTCTAGTGAGAT...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR TCA 72 bp GGGCAGACGCAGTGGGGGCGCAGGAGGAGGAGACGCTaGAGAGTGCGCCCAAGGGGGCACGGCTCTTCCCGT +
Preference number: 3 (lower is better)
Translates to: GQTQWGRRRRRR*RVRPRGHGSSR
Trigger: ACGGGAAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCCACTGCGTCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 72 bp GCCTTCCCGCAGCTGTCCGGAGACCACACAGGGCCCTaGAATCAGCTCCGAGGCAGAACTGCCGCTGCGCTC +
Preference number: 3 (lower is better)
Translates to: AFPQLSGDHTGP*NQLRGRTAAAL
Trigger: GAGCGCAGCGGCAGTTCTGCCTCGGAGCTGATTGCAGGGCCCTGTGTGGTCTCCGGACAGCTGCGGGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACGGGCCTGGGGCTCCTTaGCCCCAAGGTCAGAGGACA +
Preference number: 3 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNGPGAP*PQGQRT
Trigger: TGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCCC...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp TCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTaGCTCCTGTTCTGCTACCCAGGATGCTGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: SPGWTQPPPRQG*LLFCYPGCCSW
Trigger: CCAGGAACAGCATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCAGGGCAATCTCCAGGTaGGACGCAGCCCCCGCCCCG +
Preference number: 3 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIRAISR*DAAPAP
Trigger: CGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCCT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp ATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTaGACAGGGGCCAAACAGGAAATCGTGGCCGCCTCC +
Preference number: 3 (lower is better)
Translates to: ILTPGVRASALG*TGAKQEIVAAS
Trigger: GGAGGCGGCCACGATTTCCTGTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 72 bp CTGCCTACGGGATCTGGTCTGAGGGAGCCACTGAGGTaGTCACAGCAGCGATCGGGGACTGGCATGTCCTTC +
Preference number: 3 (lower is better)
Translates to: LPTGSGLREPLR*SQQRSGTGMSF
Trigger: GAAGGACATGCCAGTCCCCGATCGCTGCTGTGAGCACCTCAGTGGCTCCCTCAGACCAGATCCCGTAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CCA 72 bp TCCCCATACTCACGCCTGGAGTCAGGGCCAGTGCACTaGGGTGAACAGGGGCCAAACAGGAAATCGTGGCCG +
Preference number: 3 (lower is better)
Translates to: SPYSRLESGPVH*GEQGPNRKSWP
Trigger: CGGCCACGATTTCCTGTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCTGGGGCCCACTGGCTTaGGGTAGGGTTTGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVWGPLA*GRVCQG
Trigger: TCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCCA...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCCCGCCCCGCCAAGGTaGACTCCTGTTCTGCTACCC +
Preference number: 3 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEPAPPR*TPVLLP
Trigger: GGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTAGGGCAATCTCCAGGTaGGACGCAGCCCCCGCCCCG +
Preference number: 3 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPRAISR*DAAPAP
Trigger: CGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCCT...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCTGGGGCCCACTGGCTTaGGGTAGGGTTTGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIWGPLA*GRVCQG
Trigger: TCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCCA...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCCCCGCCCCGCCAAGGTaGACTCCTGTTCTGCTACCC +
Preference number: 3 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLPAPPR*TPVLLP
Trigger: GGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGG...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGGAAGACGGAGGCCCTaGCTCCCCGTCAGAAGAACC +
Preference number: 3 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLGRRRP*LPVRRT
Trigger: GGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGGGCCTGGGGCTCCTTaGCCCCAAGGTCAGAGGACA +
Preference number: 3 (lower is better)
Translates to: ASQIANTQNASGRSYSSFGPGAP*PQGQRT
Trigger: TGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCCC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp GGAAGGCTTTCAACCCTAGGCCCTGGGGGCTGGGTTTaGCCAGAGACCCCTTCCTCTTCACTCACAGAAGTC +
Preference number: 3 (lower is better)
Translates to: GRLSTLGPGGWV*PETPSSSLTEV
Trigger: GACTTCTGTGAGTGAAGAGGAAGGGGTCTCTGGTCAAACCCAGCCCCCAGGGCCTAGGGTTGAAAGCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp GTCATCCCGACTGGCCAGTTTTCAACCCAATCCCCCTaGCAAACCGCACGTAGCCGCCTCTTCAGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: VIPTGQFSTQSP*QTARSRLFSFS
Trigger: GCTGAAGCTGAAGAGGCGGCTACGTGCGGTTTGTCAGGGGGATTGGGTTGAAAACTGGCCAGTCGGGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp AGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATaGAGGGGAGGAGATGTTCACTCCAGACCCCAGCAT +
Preference number: 3 (lower is better)
Translates to: SLARTARTQARA*RGGDVHSRPQH
Trigger: ATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CCA 72 bp CAAATTGTCCAAACTGGTGAGGGAGGGTGGGAACCGTaGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAG +
Preference number: 3 (lower is better)
Translates to: QIVQTGEGGWEP*HREGQSPGWTQ
Trigger: CTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGTTTGGACAATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CCA 72 bp GCAGGAGCTACTCCTCTTTCACCCAGTCATCCCGACTaGCCAGTTTTCAACCCAATCCCCCTGACAAACCGC +
Preference number: 3 (lower is better)
Translates to: AGATPLSPSHPD*PVFNPIPLTNR
Trigger: GCGGTTTGTCAGGGGGATTGGGTTGAAAACTGGCCAGTCGGGATGACTGGGTGAAAGAGGAGTAGCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp CTGCCCCTCACCTGGACCAGACCCAGTGGGCTTGTCTaGAGTTCCACTTACTGCTCTCCTAGATACTCAGTC +
Preference number: 3 (lower is better)
Translates to: LPLTWTRPSGLV*SSTYCSPRYSV
Trigger: GACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCCCACTGGGTCTGGTCCAGGTGAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CCA 72 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTaGCAGGAGCTACTCCTCTTTCACCCAGTCATCCCG +
Preference number: 3 (lower is better)
Translates to: GGIPNCQHSKRQ*QELLLFHPVIP
Trigger: CGGGATGACTGGGTGAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCGGGCCTGGGGCTCCTTaGCCCCAAGGTCAGAGGACA +
Preference number: 3 (lower is better)
Translates to: STYCSPRYSVKNNWFRASGPGAP*PQGQRT
Trigger: TGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCCC...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp CGCACACGCACAGACACGGGCATCTCACTAGAGAGCTaGAAGGAGGGACCAATTACAACACAGGGATCCTGT +
Preference number: 3 (lower is better)
Translates to: RTRTDTGISLES*KEGPITTQGSC
Trigger: ACAGGATCCCTGTGTTGTAATTGGTCCCTCCTTTCAGCTCTCTAGTGAGATGCCCGTGTCTGTGCGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 72 bp GCCCAGAACACAAACGCCAGCGCCCAACATCGAAAGTaGTTCAATCTGCAAGCCCGTGGCAGGAAGAGTTTT +
Preference number: 3 (lower is better)
Translates to: AQNTNASAQHRK*FNLQARGRKSF
Trigger: AAAACTCTTCCTGCCACGGGCTTGCAGATTGAAGCACTTTCGATGTTGGGCGCTGGCGTTTGTGTTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CCA 72 bp CTGAGACTCAGGGATTGGAGAGCAGTCTGTGTGGTATaGGCCCGTTCCTATAGTCTATCTTCAGGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: LRLRDWRAVCVV*ARSYSLSSGWL
Trigger: CAGCCACCCTGAAGATAGACTATAGGAACGGGCCCATACCACACAGACTGCTCTCCAATCCCTGAGTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR TCA 72 bp CAGTTCAGAACATCACAAAAACACTGTAGCACGCGCTaGCACCTAACACTGTCACGGGCATGCAGAGCCCCT +
Preference number: 3 (lower is better)
Translates to: QFRTSQKHCSTR*HLTLSRACRAP
Trigger: AGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTGTTTTTGTGATGTTCTGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 72 bp CAAACGCCAGCGCCCAACATCGAAAGTGCTTCAATCTaGAAGCCCGTGGCAGGAAGAGTTTTGTGGGGTTTT +
Preference number: 3 (lower is better)
Translates to: QTPAPNIESASI*KPVAGRVLWGF
Trigger: AAAACCCCACAAAACTCTTCCTGCCACGGGCTTGCAGATTGAAGCACTTTCGATGTTGGGCGCTGGCGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVIGNFK*SKLVRE
Trigger: CTCCCTCACCAGTTTGGACAATTTGAAATTACCTAT...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR GCA 72 bp AATAATATTATAGCCATCTGGGCAGGGTCACGGTGGTaGCCAGAACACAAACGCCAGCGCCCAACATCGAAA +
Preference number: 3 (lower is better)
Translates to: NNIIAIWAGSRW*PEHKRQRPTSK
Trigger: TTTCGATGTTGGGCGCTGGCGTTTGTGTTCTGGGCACCACCGTGACCCTGCCCAGATGGCTATAATATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTTGGGGCCCACTGGCTTaGGGTAGGGTTTGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIWGPLA*GRVCQG
Trigger: TCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCCA...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLIGNFK*SKLVRE
Trigger: CTCCCTCACCAGTTTGGACAATTTGAAATTACCTAT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCTCTGAGACTCAGGGATaGGAGAGCAGTCTGTGTGGT +
Preference number: 3 (lower is better)
Translates to: STYCSPRYSVKNNWFRASSETQG*ESSLCG
Trigger: ACCACACAGACTGCTCTCCAATCCCTGAGTCTCAGA...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAAGGAGGCATCCCAAATaGCCAACACTCAAAACGCCA +
Preference number: 3 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISRRHPK*PTLKTP
Trigger: TGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCCT...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR CCA 72 bp AGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCTaGATCAGTTTAAAGGAAAATGAACCTCCCAGACAC +
Preference number: 3 (lower is better)
Translates to: RYSVKNNWFRAS*ISLKENEPPRH
Trigger: GTGTCTGGGAGGTTCATTTTCCTTTAAACTGATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCACTCAGTCAAAAACAATaGGTTCAGGGCCAGCTGGAT +
Preference number: 3 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISLSQKQ*VQGQLD
Trigger: ATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGAG...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR-3UTR CAA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIIGNFK*SKLVRE
Trigger: CTCCCTCACCAGTTTGGACAATTTGAAATTACCTAT...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR-3UTR CAA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAGCTATGTTGCAAGCTTaGACAAGTCTTTACCCATTC +
Preference number: 3 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISAMLQA*TSLYPF
Trigger: GAATGGGTAAAGACTTGTCAAAGCTTGCAACATAGC...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
3UTR CCA 72 bp ACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTaGTTCAGGGCCAGCTGGATCAGTTTAAAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: TYCSPRYSVKNN*FRASWISLKEN
Trigger: ATTTTCCTTTAAACTGATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTCAACCACCACCCCGCTaGCTGGGCTGGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALQPPPR*LGWAEA
Trigger: CGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTGGTTG...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTCGCTCCGCGCCTGGCTaGAGCGATCGGGGTCGAACA +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALRSAPG*SDRGRT
Trigger: TGTTCGACCCCGATCGCTTCAGCCAGGCGCGGAGCG...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACAGCACATGCGGCCCCTaGCGGAGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHSTCGP*RRESAS
Trigger: GGAGGCGGACTCCCTCCGTCAGGGGCCGCATGTGCT...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412253.1
CDS-3UTR CCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTTCCTCGCTCCGCGCCTaGCTGAAGCGATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALSSLRA*LKRSGS
Trigger: CGACCCCGATCGCTTCAGCCAGGCGCGGAGCGAGGA...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACGGGGCGGGCAGCACATaGGCCGCGGGCCTTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNGAGST*AAGLRR
Trigger: CCGCCTAAGGCCCGCGGCTCATGTGCTGCCCGCCCC...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCTGGCCTCGGGGTGGCTaGTCCAGGCGCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPWPRGG*SRRAVC
Trigger: ACACACTGCGCGCCTGGAGCAGCCACCCCGAGGCCA...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTGCTTGGCCAGGTGCTTaGCCAGGCAGGTCCGGACAC +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALAWPGA*PGRSGH
Trigger: GTGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGC...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGGCATGCAGAGCCCCTaGCACGCCCTTCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPGMQSP*HALPRG
Trigger: GCCCCTGGGAAGGGCGTGGCAGGGGCTCTGCATGCC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTGGAGACGCTGAAGAGTaGGCCCAAGGGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALGDAEE*AQGGTA
Trigger: AGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCC...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGCTCCGAGGCAGAACTaGCGCTGCGCTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHAPRQN*RCAHLP
Trigger: GGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTCTGTGGCGCTCAGCATaGCCTCCGTCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALLWRSA*PPSPAG
Trigger: TCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAG...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCCCCGCTGCCTGGGCTaGGCTGAGGCGGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDPRCLG*AEAGGS
Trigger: AGACCCACCCGCCTCAGCCCAGCCCAGGCAGCGGGG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCACCACCCCGCTGCCTaGGCTGGGCTGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDHHPAA*AGLRRV
Trigger: CACCCGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCGCCGGTAGCCACTaGAGGGCAGGTCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFPAGSH*RAGRQA
Trigger: TGCCTGTCGACCTGCCCTTCAGTGGCTACCGGCGGG...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACCTGTGCAGGATGCCATaGGCCCGCAGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHLCRMP*ARSSSR
Trigger: GCGGGATGAGCTGCGGGCTCATGGCATCCTGCACAG...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCGCTCCGCGCCTGGCTaGAGCGATCGGGGTCGAACA +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPRSAPG*SDRGRT
Trigger: TGTTCGACCCCGATCGCTTCAGCCAGGCGCGGAGCG...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTCCGCCCCGCCAAGGTTaGCTCCTGTTCTGCTACCCA +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALPPRQG*LLFCYP
Trigger: TGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGG...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCGCAGCTGCCACAGCTaGTGCGACACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFRSCHS*CDTASS
Trigger: GCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCG...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR GCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACTGCGAGGCCACTCGGTaGTCACGAGGTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHCEATR*SRGGAR
Trigger: GCGAGCACCACCTCGTGAGCACCGAGTGGCCTCGCA...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCAACCACCACCCCGCTaGCTGGGCTGGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQQPPPR*LGWAEA
Trigger: CGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTGGTTG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGGCATGCAGAGCCCCTaGCACGCCCTTCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQGMQSP*HALPRG
Trigger: GCCCCTGGGAAGGGCGTGGCAGGGGCTCTGCATGCC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCACACTGTCACGGGCATaGAGAGCCCCTGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPTLSRA*RAPATP
Trigger: GGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGT...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCGGAGACGCTGAAGAGTaGGCCCAAGGGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPGDAEE*AQGGTA
Trigger: AGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCC...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGGCCACCAGGGAGGATaGTGGGGAGACAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPGHQGG*WGDRAW
Trigger: CCAGGCCCTGTCTCCCCAGCATCCTCCCTGGTGGCC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGGTGAGGTGCTGGCGCTaGCCGTGGTGGCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPVRCWR*PWWHRP
Trigger: CGGCCTATGCCACCACGGCCAGCGCCAGCACCTCAC...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGGGGCAATCTCCAGGTTaGACGCAGCCCCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLGQSPG*TQPPPR
Trigger: GCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCC...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGGCCGGTCTCTCCGATaGGCGGGAAGCCCATGGATC +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFGRSLR*AGSPWI
Trigger: GATCCATGGGCTTCCCGCTCATCGGAGAGACCGGCC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR TCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCCCGCCGGTAGCCACTaGAGGGCAGGTCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQPAGSH*RAGRQA
Trigger: TGCCTGTCGACCTGCCCTTCAGTGGCTACCGGCGGG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGCTTGGCCAGGTGCTTaGCCAGGCAGGTCCGGACAC +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPAWPGA*PGRSGH
Trigger: GTGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCAGGTGGGGGTGTCAGTaGACCTGCCCAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPRWGCQ*TCPGPP
Trigger: TGGTGGCCCTGGGCAGGTGCACTGACACCCCCACCT...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCTGTGGCGCTCAGCATaGCCTCCGTCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFLWRSA*PPSPAG
Trigger: TCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAG...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCCTGTGGCGCTCAGCATaGCCTCCGTCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPLWRSA*PPSPAG
Trigger: TCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAG...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCAGGGGATGGGAAGGTaGGGGTGTCAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPQGMGR*GCQCTC
Trigger: GCAGGTGCACTGACACCCCCACCTTCCCATCCCCTG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCAGCTGCATGATGAGTaGGGTGCTGGCGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPQLHDE*GAGAGR
Trigger: ACGGCCAGCGCCAGCACCTCACTCATCATGCAGCTG...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCTGTGCAGGATGCCATaGGCCCGCAGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDLCRMP*ARSSSR
Trigger: GCGGGATGAGCTGCGGGCTCATGGCATCCTGCACAG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGCCCTTCCCAGGGGCTaGGCTGATGGTAAATGGGGA +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHALPRG*ADGKWG
Trigger: TCCCCATTTACCATCAGCTCAGCCCCTGGGAAGGGC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTGTGCTCACGAGGTGGTaGTCGCCCATGAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALVLTRW*SPMRIL
Trigger: CAAGATCCTCATGGGCGAGCACCACCTCGTGAGCAC...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTCGGAAGGTCAGCTTCTaGGCCTCCTGGTACACGTTG +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALRKVSF*ASWYTL
Trigger: CAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCG...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGAGGCCATCCACGGGGTaGAGGACGGGGACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQRPSTG*RTGTKV
Trigger: CACCTTGGTCCCCGTCCTGCACCCCGTGGATGGCCT...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCAGGGAGCCACTGAGGTaGTCACAGCAGCGATCGGGG +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPREPLR*SQQRSG
Trigger: CCCCGATCGCTGCTGTGAGCACCTCAGTGGCTCCCT...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACAGCTCTTGTCGCGAGTaGCGGCCCAGCGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNSSCRE*RPSAAA
Trigger: GGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCT...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCAGCCCATGGATCCCTTaGGGATGGGCAGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPSPWIP*GWAACS
Trigger: GCTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCT...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCCCTGCAGCAGCCAGTaGCCGGTCTCTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQPCSSQ*PVSPMS
Trigger: GCTCATCGGAGAGACCGGCCACTGGCTGCTGCAGGG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCTCCCTCCGCGACGACTaGAAGCCAGAACCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPSLRDD*KPEPCS
Trigger: GCTGCAGGGTTCTGGCTTCCAGTCGTCGCGGAGGGA...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCACCACCCCGCTGCCTaGGCTGGGCTGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVHHPAA*AGLRRV
Trigger: CACCCGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTG...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCCAGGATGCTGTTCCTaGGCAGACGCAGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLPGCCS*ADAVGA
Trigger: CGCCCCCACTGCGTCTGCCCAGGAACAGCATCCTGG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTTTCAACCCTAGGCCCTaGGGGCTGGGTTTGACCAGA +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALFNPRP*GLGLTR
Trigger: TCTGGTCAAACCCAGCCCCCAGGGCCTAGGGTTGAA...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGCTGCCTACGGGATCTaGTCTGAGGGAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHAAYGI*SEGATE
Trigger: CTCAGTGGCTCCCTCAGACCAGATCCCGTAGGCAGC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGTCAGGGTCGGTCTGTaGGGCTGCCTACGGGATCTG +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFVRVGL*GCLRDL
Trigger: CAGATCCCGTAGGCAGCCCCACAGACCGACCCTGAC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCCCCTGCCCCTCACCTaGACCAGACCCAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLPLPLT*TRPSGL
Trigger: AAGCCCACTGGGTCTGGTCCAGGTGAGGGGCAGGGG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACTGGGCAGGGTCACGGTaGTGCCCAGAACACAAACGC +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHWAGSR*CPEHKR
Trigger: GCGTTTGTGTTCTGGGCACCACCGTGACCCTGCCCA...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACCCTCCTGGTACACGTTaGTGGCCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNPPGTR*WPRGGC
Trigger: GCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGG...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCAGCTGCATGATGAGTaGGGTGCTGGCGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDQLHDE*GAGAGR
Trigger: ACGGCCAGCGCCAGCACCTCACTCATCATGCAGCTG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCAGCTGCATGATGAGTaGGGTGCTGGCGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLQLHDE*GAGAGR
Trigger: ACGGCCAGCGCCAGCACCTCACTCATCATGCAGCTG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCCGCCCCGCCAAGGTTaGCTCCTGTTCTGCTACCCA +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLPPRQG*LLFCYP
Trigger: TGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTACACAGGCTAGGGCATaGAGGGGAGGAGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALTQARA*RGGDVH
Trigger: GTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGT...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCCTGGGGGCTGGGTTTaGCCAGAGACCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLPGGWV*PETPSS
Trigger: AGAGGAAGGGGTCTCTGGTCAAACCCAGCCCCCAGG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGCCAGTGCACTGGGGTaGACAGGGGCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPASALG*TGAKQE
Trigger: TTCCTGTTTGGCCCCTGTTCACCCCAGTGCACTGGC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCTCAACCCAATCCCCCTaGCAAACCGCACGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFSTQSP*QTARSR
Trigger: GCGGCTACGTGCGGTTTGTCAGGGGGATTGGGTTGA...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCTTGCCCTGTGTGCACTaGAGCTTCTCCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFLPCVH*SFSRMA
Trigger: GGCCATCCGGGAGAAGCTGCAGTGCACACAGGGCAA...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTTGTCCAGGCGCAGTGTaGCCTCGCAGGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSCPGAV*PRRGSR
Trigger: GCGGCTGCCCCTGCGAGGGCACACTGCGCCTGGACA...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCAGGTCTGCAGCACAGTaGGGTAGCCGCCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFRSAAQ*GSRRKW
Trigger: CCATTTCCGGCGGCTACCGCACTGTGCTGCAGACCT...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGCTTTGGGTAGGGTTTaGCAGGGAGGGGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPALGRV*QGGGAR
Trigger: CCTTGCTCCCCCTCCCTGGCAAACCCTACCCAAAGC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGCAGGGTCACGGTGGTaGCCAGAACACAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFAGSRW*PEHKRQ
Trigger: CTGGCGTTTGTGTTCTGGGCACCACCGTGACCCTGC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCCCTCAAAGAGCATGTTaGCGGCCGCTCGGGGGATTG +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPPQRAC*RPLGGL
Trigger: CAATCCCCCGAGCGGCCGCCAACATGCTCTTTGAGG...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAGAT +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVGTRRG*PAPTPD
Trigger: ATCTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCC...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCTCGGTGCTCACGAGGTaGTGCTCGCCCATGAGGATC +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFSVLTR*CSPMRI
Trigger: GATCCTCATGGGCGAGCACCACCTCGTGAGCACCGA...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGCGCGCAGTGTGTCCTaGATCACCAGCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHARSVS*ITSWIL
Trigger: CAAGATCCAGCTGGTGATCCAGGACACACTGCGCGC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGTGCTGGCGCTGGCCGTaGTGGCATAGGCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQCWRWP*WHRPQR
Trigger: TCTTTGCGGCCTATGCCACCACGGCCAGCGCCAGCA...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCGCTTCTCCAGCACAGTaGGGTGCTTCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPASPAQ*GASAAA
Trigger: TGCAGCTGCTGAAGCACCCCACTGTGCTGGAGAAGC...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGGGGCCCACTGGCTTTaGGTAGGGTTTGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDGAHWL*VGFARE
Trigger: CTCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGGGCAATCTCCAGGTTaGACGCAGCCCCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSGQSPG*TQPPPR
Trigger: GCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCCCCCATACTCACGCCTaGAGTCAGGGCCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPPHTHA*SQGQCT
Trigger: AGTGCACTGGCCCTGACTCCAGGCGTGAGTATGGGG...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGGCTGCCTACGGGATCTaGTCTGAGGGAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPAAYGI*SEGATE
Trigger: CTCAGTGGCTCCCTCAGACCAGATCCCGTAGGCAGC...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGTCAGGGTCGGTCTGTaGGGCTGCCTACGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQVRVGL*GCLRDL
Trigger: CAGATCCCGTAGGCAGCCCCACAGACCGACCCTGAC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCCGCCGGTAGCCACTaGAGGGCAGGTCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSPAGSH*RAGRQA
Trigger: TGCCTGTCGACCTGCCCTTCAGTGGCTACCGGCGGG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCCTTGCTGCTCTCAATaGGGAGGTCCAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQPCCSQ*GGPGRP
Trigger: TGGACGCCCTGGACCTCCTCATTGAGAGCAGCAAGG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGCTCCGCGCCTGGCTaGAGCGATCGGGGTCGAACA +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSRSAPG*SDRGRT
Trigger: TGTTCGACCCCGATCGCTTCAGCCAGGCGCGGAGCG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGCCCTTCCCAGGGGCTaGGCTGATGGTAAATGGGGA +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQALPRG*ADGKWG
Trigger: TCCCCATTTACCATCAGCTCAGCCCCTGGGAAGGGC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGCCCTTCCCAGGGGCTaGGCTGATGGTAAATGGGGA +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDALPRG*ADGKWG
Trigger: TCCCCATTTACCATCAGCTCAGCCCCTGGGAAGGGC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACCCTCTTCCCCACCCCTaGGCTGGGCTAAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNPLPHP*AGLSRQ
Trigger: CTGTCTGCTTAGCCCAGCTCAGGGGTGGGGAAGAGG...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGCAGCTGCCACAGCTaGTGCGACACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSRSCHS*CDTASS
Trigger: GCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCGCCACTGTGCAGGATaGCATGAGCCCGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQRHCAG*HEPAAH
Trigger: ATGAGCTGCGGGCTCATGGCATCCTGCACAGTGGCG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCGCCACTGTGCAGGATaGCATGAGCCCGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLRHCAG*HEPAAH
Trigger: ATGAGCTGCGGGCTCATGGCATCCTGCACAGTGGCG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGTGTCCAGGCGCAGTGTaGCCTCGCAGGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEECPGAV*PRRGSR
Trigger: GCGGCTGCCCCTGCGAGGGCACACTGCGCCTGGACA...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACGGCCTGGGGCTCCTTTaGCCCAAGGTCAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNGLGLL*PKVRGQ
Trigger: CTGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCC...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGGCCACCAGGGAGGATaGTGGGGAGACAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSGHQGG*WGDRAW
Trigger: CCAGGCCCTGTCTCCCCAGCATCCTCCCTGGTGGCC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGCTCCGAGGCAGAACTaGCGCTGCGCTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSAPRQN*RCAHLP
Trigger: GGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGACCACACAGGGCCCTaGAATCAGCTCCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDDHTGP*NQLRGR
Trigger: TCTGCCTCGGAGCTGATTGCAGGGCCCTGTGTGGTC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGACCACACAGGGCCCTaGAATCAGCTCCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQDHTGP*NQLRGR
Trigger: TCTGCCTCGGAGCTGATTGCAGGGCCCTGTGTGGTC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCTCTTCAGCTTCAGCTaGGGCAGCCTTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDLFSFS*GSLPAA
Trigger: AGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTCTTCAGCTTCAGCTaGGGCAGCCTTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLLFSFS*GSLPAA
Trigger: AGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCCTCAAAGAGCATGTTaGCGGCCGCTCGGGGGATTG +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQPQRAC*RPLGGL
Trigger: CAATCCCCCGAGCGGCCGCCAACATGCTCTTTGAGG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGAGCCCATGGATCCCTTaGGGATGGGCAGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQSPWIP*GWAACS
Trigger: GCTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCT...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCTGTCGCCAATGGAATTaGACACCGTGTTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPCRQWN*TPCWGP
Trigger: TGGGCCCCAACACGGTGTCCAATTCCATTGGCGACA...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCTCACCAGCTGGATCTTaGGCAGGTAACTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPSPAGS*AGNSPG
Trigger: CCCTGGAGAGTTACCTGCCCAAGATCCAGCTGGTGA...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGGCGCGCAGTGTGTCCTaGATCACCAGCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPARSVS*ITSWIL
Trigger: CAAGATCCAGCTGGTGATCCAGGACACACTGCGCGC...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCAGCTTCTGCGCCTCCTaGTACACGTTGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFSFCAS*YTLMAS
Trigger: CGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCT...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCCTTCAGGAACAGCTTaGCCAGGTGCTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQPSGTA*PGACPG
Trigger: GCCTGGGCAAGCACCTGGCCAAGCTGTTCCTGAAGG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCCTTCAGGAACAGCTTaGCCAGGTGCTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDPSGTA*PGACPG
Trigger: GCCTGGGCAAGCACCTGGCCAAGCTGTTCCTGAAGG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGGTAGCGCAGCCCACTaGGCGTGTCCAGGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIGSAAH*ACPGAV
Trigger: CACTGCGCCTGGACACGCTCAGTGGGCTGCGCTACC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGGGGCGGGCAGCACATaGGCCGCGGGCCTTAGGCGG +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFGAGST*AAGLRR
Trigger: CCGCCTAAGGCCCGCGGCTCATGTGCTGCCCGCCCC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCTCTTCTCACTGCCTTTaGGACCCAGCGGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFSSHCL*DPAGQM
Trigger: CATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGA...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTTGGGGCCCAGCAACATaGGGGTGCTGCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSWGPAT*GCCEAT
Trigger: AGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCA...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTGGCCTCGGGGTGGCTaGTCCAGGCGCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPWPRGG*SRRAVC
Trigger: ACACACTGCGCGCCTGGAGCAGCCACCCCGAGGCCA...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCGGAAGGTCAGCTTCTaGGCCTCCTGGTACACGTTG +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQRKVSF*ASWYTL
Trigger: CAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCTTCTGCTACCCAGGATaGTGTTCCTGGGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFFCYPG*CSWADA
Trigger: TGCGTCTGCCCAGGAACAGCATCCTGGGTAGCAGAA...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTGGAGGCATCCCAAATTaGCAACACTCAAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: GGAGGGDAEECAQGGTALGGIPN*QHSKRQ
Trigger: CTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATAATTGGACACCGTGTTaGGGCCCAGCAACATGCGGG +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDNWTPC*GPATCG
Trigger: CCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATT...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGACGGGCGCTGTGTCATaGGTGTCCCGGATGCTATAC +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLTGAVS*VSRMLY
Trigger: GTATAGCATCCGGGACACCCATGACACAGCGCCCGT...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCTCGCTCCGCGCCTaGCTGAAGCGATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPSSLRA*LKRSGS
Trigger: CGACCCCGATCGCTTCAGCCAGGCGCGGAGCGAGGA...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGGCAGGATCTCGTTCTaGTTGGAGTCCAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPGRISF*LESRPK
Trigger: CTTTGGCCTGGACTCCAACCAGAACGAGATCCTGCC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTCACCACCCCGCTGCCTaGGCTGGGCTGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPHHPAA*AGLRRV
Trigger: CACCCGCCTCAGCCCAGCCCAGGCAGCGGGGTGGTG...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCAAGGGAGGGCAAGTATaGGGGCCACTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVKGGQV*GPLALP
Trigger: GGGGAGGGCGAGTGGCCCCCATACTTGCCCTCCCTT...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCCAGGATGCTGTTCCTaGGCAGACGCAGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVPGCCS*ADAVGA
Trigger: CGCCCCCACTGCGTCTGCCCAGGAACAGCATCCTGG...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACCCCAGTCATCCCGACTaGCCAGTTTTCAACCCAATC +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHPSHPD*PVFNPI
Trigger: GATTGGGTTGAAAACTGGCCAGTCGGGATGACTGGG...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGCAGCGATCGGGGACTaGCATGTCCTTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHAAIGD*HVLHSS
Trigger: AGAAGAATGAAGGACATGCCAGTCCCCGATCGCTGC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACGGAGAGCAGTCTGTGTaGTATGGGCCCGTTCCTATA +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHGEQSV*YGPVPI
Trigger: TATAGGAACGGGCCCATACCACACAGACTGCTCTCC...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCTGGACCAGACCCAGTaGGCTTGTCTGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPLDQTQ*ACLKFH
Trigger: GTGGAACTTCAGACAAGCCCACTGGGTCTGGTCCAG...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CAA 72 bp ATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTaGACTCCTGTTCTGCTACCCAGGATGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ISRLDAAPAPPR*TPVLLPRMLFL
Trigger: CAGGAACAGCATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCCTCCTGGTACACGTTaGTGGCCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPPPGTR*WPRGGC
Trigger: GCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGGTAGCGCAGCCCACTaGGCGTGTCCAGGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLGSAAH*ACPGAV
Trigger: CACTGCGCCTGGACACGCTCAGTGGGCTGCGCTACC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCACACGTTCACGTCTTTaGACACGGGCGCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPTRSRL*TRALCH
Trigger: ATGACACAGCGCCCGTGTTCAAAGACGTGAACGTGT...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGGACGGGGACCAAGGTaGTGCGGGGGAAGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLGRGPR*CGGRSV
Trigger: CACGGACCTTCCCCCGCATCACCTTGGTCCCCGTCC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCTGGGGGCTGGGTTTaGCCAGAGACCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSPGGWV*PETPSS
Trigger: AGAGGAAGGGGTCTCTGGTCAAACCCAGCCCCCAGG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCCCAGTGGGCTTGTCTaGAGTTCCACTTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPPSGLV*SSTYCS
Trigger: AGAGCAGTAAGTGGAACTTCAGACAAGCCCACTGGG...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACTCTTGGAGAAGACCTTaGGCTTGTTGCGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHSWRRP*ACCGGC
Trigger: ACATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGA...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCGTCCAAGTAGTCCTTaGCCTGTGTGCACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQRPSSP*PVCTAA
Trigger: AGCTGCAGTGCACACAGGGCAAGGACTACTTGGACG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGTCCAGCACAGTGGGGTaGTTCAGCAGCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQSSTVG*FSSCMM
Trigger: CATCATGCAGCTGCTGAAGCACCCCACTGTGCTGGA...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTTGTCCAGGCGCAGTGTaGCCTCGCAGGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPCPGAV*PRRGSR
Trigger: GCGGCTGCCCCTGCGAGGGCACACTGCGCCTGGACA...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCAGGCCATCCACGGGGTaGAGGACGGGGACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIRPSTG*RTGTKV
Trigger: CACCTTGGTCCCCGTCCTGCACCCCGTGGATGGCCT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGGCATGCAGAGCCCCTaGCACGCCCTTCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPGMQSP*HALPRG
Trigger: GCCCCTGGGAAGGGCGTGGCAGGGGCTCTGCATGCC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCAGGTGGGGGTGTCAGTaGACCTGCCCAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIRWGCQ*TCPGPP
Trigger: TGGTGGCCCTGGGCAGGTGCACTGACACCCCCACCT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCGAAAGTGCTTCAATCTaGAAGCCCGTGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPESASI*KPVAGR
Trigger: TCTTCCTGCCACGGGCTTGCAGATTGAAGCACTTTC...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCTCTCCAGGGCCTCGTaGCTGAAGATCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDLSRAS*LKILEK
Trigger: CTTCTCCAAGATCTTCAGCCACGAGGCCCTGGAGAG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTCTCCAGGGCCTCGTaGCTGAAGATCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLLSRAS*LKILEK
Trigger: CTTCTCCAAGATCTTCAGCCACGAGGCCCTGGAGAG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGTCACCAGCTGGATCTTaGGCAGGTAACTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLSPAGS*AGNSPG
Trigger: CCCTGGAGAGTTACCTGCCCAAGATCCAGCTGGTGA...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCAGCCTTTGGGGATCTaGAAACCATCAAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPQPLGI*KPSSSK
Trigger: CTTCGAGCTTGATGGTTTCCAGATCCCCAAAGGCTG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTGGGGGAAGGTCCGTGTaGCCAGCTCAAAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPGGRSV*PAQSGW
Trigger: CCAGCCGCTTTGAGCTGGCCACACGGACCTTCCCCC...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACCCCGCTGCCTGGGCTaGGCTGAGGCGGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEPRCLG*AEAGGS
Trigger: AGACCCACCCGCCTCAGCCCAGCCCAGGCAGCGGGG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACAGGAATGGGGCCCACTaGCTTTGGGTAGGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNRNGAH*LWVGFA
Trigger: GGCAAACCCTACCCAAAGCCAGTGGGCCCCATTCCT...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCCAGGATGCTGTTCCTaGGCAGACGCAGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPPGCCS*ADAVGA
Trigger: CGCCCCCACTGCGTCTGCCCAGGAACAGCATCCTGG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACTTCAACCCTAGGCCCTaGGGGCTGGGTTTGACCAGA +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNFNPRP*GLGLTR
Trigger: TCTGGTCAAACCCAGCCCCCAGGGCCTAGGGTTGAA...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCACTCAAAACGCCAGTaGCAGGAGCTACTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPHSKRQ*QELLLF
Trigger: AAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGGAGAGCAGTCTGTGTaGTATGGGCCCGTTCCTATA +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFGEQSV*YGPVPI
Trigger: TATAGGAACGGGCCCATACCACACAGACTGCTCTCC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACCTGAGACTCAGGGATTaGAGAGCAGTCTGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: AASSASAAAAFPQLSGDHLRLRD*RAVCVV
Trigger: TACCACACAGACTGCTCTCCAATCCCTGAGTCTCAG...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCTGGACCAGACCCAGTaGGCTTGTCTGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQLDQTQ*ACLKFH
Trigger: GTGGAACTTCAGACAAGCCCACTGGGTCTGGTCCAG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCCTGCCCCTCACCTaGACCAGACCCAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIPLPLT*TRPSGL
Trigger: AAGCCCACTGGGTCTGGTCCAGGTGAGGGGCAGGGG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGACTTCAGTCCAGGAGTaGGGCTCCGAGATTAAACCC +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLTSVQE*GSEIKP
Trigger: GGGTTTAATCTCGGAGCCTCACTCCTGGACTGAAGT...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCCTCTTCCCCACCCCTaGGCTGGGCTAAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPPLPHP*AGLSRQ
Trigger: CTGTCTGCTTAGCCCAGCTCAGGGGTGGGGAAGAGG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTTCAACCCAATCCCCCTaGCAAACCGCACGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSSTQSP*QTARSR
Trigger: GCGGCTACGTGCGGTTTGTCAGGGGGATTGGGTTGA...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCTGGAAGCCAGAACCCTaGAGCAGCCAGTGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIWKPEP*SSQWPV
Trigger: GACCGGCCACTGGCTGCTGCAGGGTTCTGGCTTCCA...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCCCAGCAACATGCGGGTaGTGCGAGGCCACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLPATCG*CEATRC
Trigger: GCACCGAGTGGCCTCGCAGCACCCGCATGTTGCTGG...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTTGGCCTCGGGGTGGCTaGTCCAGGCGCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPWPRGG*SRRAVC
Trigger: ACACACTGCGCGCCTGGAGCAGCCACCCCGAGGCCA...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGAACAGCTTGGCCAGGTaGTTGCCCAGGCAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEENSLAR*LPRQVR
Trigger: CCGGACCTGCCTGGGCAAGCACCTGGCCAAGCTGTT...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCAACAGCTTGGCCAGGTaGTTGCCCAGGCAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSINSLAR*LPRQVR
Trigger: CCGGACCTGCCTGGGCAAGCACCTGGCCAAGCTGTT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCAGGCCATCCACGGGGTaGAGGACGGGGACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLRPSTG*RTGTKV
Trigger: CACCTTGGTCCCCGTCCTGCACCCCGTGGATGGCCT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGCTTTGGGTAGGGTTTaGCAGGGAGGGGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVALGRV*QGGGAR
Trigger: CCTTGCTCCCCCTCCCTGGCAAACCCTACCCAAAGC...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGCTTTGGGTAGGGTTTaGCAGGGAGGGGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSALGRV*QGGGAR
Trigger: CCTTGCTCCCCCTCCCTGGCAAACCCTACCCAAAGC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTGGCCTGGGGCTCCTTTaGCCCAAGGTCAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPGLGLL*PKVRGQ
Trigger: CTGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCC...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTGGAGTCAGGGCCAGTaGACTGGGGTGAACAGGGGC +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPWSQGQ*TGVNRG
Trigger: GCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCA...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGCCCAACATCGAAAGTaGTTCAATCTGCAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPAQHRK*FNLQAR
Trigger: ACGGGCTTGCAGATTGAAGCACTTTCGATGTTGGGC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAGAT +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEGTRRG*PAPTPD
Trigger: ATCTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCC...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGGTGGATGTCGCCAATaGAATTGGACACCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDGGCRQ*NWTPCW
Trigger: CCAACACGGTGTCCAATTCCATTGGCGACATCCACC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTTGGCGCTGGCCGTGGTaGCATAGGCCGCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSWRWPW*HRPQRS
Trigger: TGATCTTTGCGGCCTATGCCACCACGGCCAGCGCCA...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGTGCTGGCGCTGGCCGTaGTGGCATAGGCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEECWRWP*WHRPQR
Trigger: TCTTTGCGGCCTATGCCACCACGGCCAGCGCCAGCA...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTTCCTCGCTCCGCGCCTaGCTGAAGCGATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPSSLRA*LKRSGS
Trigger: CGACCCCGATCGCTTCAGCCAGGCGCGGAGCGAGGA...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGGGGGAAGGTCCGTGTaGCCAGCTCAAAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLGGRSV*PAQSGW
Trigger: CCAGCCGCTTTGAGCTGGCCACACGGACCTTCCCCC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGGATCTCGTTCTGGTTaGAGTCCAGGCCAAAGAACT +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFGSRSG*SPGQRT
Trigger: AGTTCTTTGGCCTGGACTCCAACCAGAACGAGATCC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGGGGCCCACTGGCTTTaGGTAGGGTTTGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIGAHWL*VGFARE
Trigger: CTCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAGGGCAATCTCCAGGTTaGACGCAGCCCCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEGQSPG*TQPPPR
Trigger: GCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCC...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCACTCAAAACGCCAGTaGCAGGAGCTACTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPHSKRQ*QELLLF
Trigger: AAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTG...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGCTGCCTACGGGATCTaGTCTGAGGGAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVAAYGI*SEGATE
Trigger: CTCAGTGGCTCCCTCAGACCAGATCCCGTAGGCAGC...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGTCAGGGTCGGTCTGTaGGGCTGCCTACGGGATCTG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIVRVGL*GCLRDL
Trigger: CAGATCCCGTAGGCAGCCCCACAGACCGACCCTGAC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGCAGTCTGTGTGGTATaGGCCCGTTCCTATAGTCTA +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFAVCVV*ARSYSL
Trigger: TAGACTATAGGAACGGGCCCATACCACACAGACTGC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCTGAGACTCAGGGATTaGAGAGCAGTCTGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFLRLRD*RAVCVV
Trigger: TACCACACAGACTGCTCTCCAATCCCTGAGTCTCAG...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGACCTGCAGCAGCCAGTaGCCGGTCTCTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEETCSSQ*PVSPMS
Trigger: GCTCATCGGAGAGACCGGCCACTGGCTGCTGCAGGT...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546307.5
CDS-3UTR TCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGGCCGGTCTCTCCGATaGGCGGGAAGCCCATGGATC +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPGRSLR*AGSPWI
Trigger: GATCCATGGGCTTCCCGCTCATCGGAGAGACCGGCC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR TCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCCTTGCTGCTCTCAATaGGGAGGTCCAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEPCCSQ*GGPGRP
Trigger: TGGACGCCCTGGACCTCCTCATTGAGAGCAGCAAGG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCCTTGCTGCTCTCAATaGGGAGGTCCAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIPCCSQ*GGPGRP
Trigger: TGGACGCCCTGGACCTCCTCATTGAGAGCAGCAAGG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAGGACGGGGACCAAGGTaGTGCGGGGGAAGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEGRGPR*CGGRSV
Trigger: CACGGACCTTCCCCCGCATCACCTTGGTCCCCGTCC...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGGACGGGGACCAAGGTaGTGCGGGGGAAGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFGRGPR*CGGRSV
Trigger: CACGGACCTTCCCCCGCATCACCTTGGTCCCCGTCC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCGCCTCCAAATCTACCTaGTCAGGGTTTTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPASKST*SGFLTG
Trigger: TCCTGTCAAAAACCCTGATCAGGTAGATTTGGAGGC...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCATCTCACTAGAGAGCTaGAAGGAGGGACCAATTACA +
Preference number: 4 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPISLES*KEGPIT
Trigger: TGTAATTGGTCCCTCCTTTCAGCTCTCTAGTGAGAT...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCTGGGGATGGGCAGCTTaGAGCTCTTGTCGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIWGWAA*SSCREW
Trigger: CCACTCGCGACAAGAGCTGCAAGCTGCCCATCCCCA...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCAGGTCTGCAGCACAGTaGGGTAGCCGCCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIRSAAQ*GSRRKW
Trigger: CCATTTCCGGCGGCTACCGCACTGTGCTGCAGACCT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGAGGTCTGCAGCACAGTaGGGTAGCCGCCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEERSAAQ*GSRRKW
Trigger: CCATTTCCGGCGGCTACCGCACTGTGCTGCAGACCT...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGGCCACCAGGGAGGATaGTGGGGAGACAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFGHQGG*WGDRAW
Trigger: CCAGGCCCTGTCTCCCCAGCATCCTCCCTGGTGGCC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGGACCACACAGGGCCCTaGAATCAGCTCCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEDHTGP*NQLRGR
Trigger: TCTGCCTCGGAGCTGATTGCAGGGCCCTGTGTGGTC...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGGAGGCATCCCAAATTaGCAACACTCAAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDGGIPN*QHSKRQ
Trigger: CTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGGGAGGCATCCCAAATTaGCAACACTCAAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLGGIPN*QHSKRQ
Trigger: CTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCAGGGAGCCACTGAGGTaGTCACAGCAGCGATCGGGG +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLREPLR*SQQRSG
Trigger: CCCCGATCGCTGCTGTGAGCACCTCAGTGGCTCCCT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGAAAGTGCTTCAATCTaGAAGCCCGTGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQESASI*KPVAGR
Trigger: TCTTCCTGCCACGGGCTTGCAGATTGAAGCACTTTC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGCAGGGTCACGGTGGTaGCCAGAACACAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIAGSRW*PEHKRQ
Trigger: CTGGCGTTTGTGTTCTGGGCACCACCGTGACCCTGC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGCGCGCAGTGTGTCCTaGATCACCAGCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSARSVS*ITSWIL
Trigger: CAAGATCCAGCTGGTGATCCAGGACACACTGCGCGC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGTGGCGCTGGCCGTGGTaGCATAGGCCGCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEWRWPW*HRPQRS
Trigger: TGATCTTTGCGGCCTATGCCACCACGGCCAGCGCCA...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCTGGCGCTGGCCGTGGTaGCATAGGCCGCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIWRWPW*HRPQRS
Trigger: TGATCTTTGCGGCCTATGCCACCACGGCCAGCGCCA...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGTGAGGTGCTGGCGCTaGCCGTGGTGGCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFVRCWR*PWWHRP
Trigger: CGGCCTATGCCACCACGGCCAGCGCCAGCACCTCAC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCAGCCTTTGGGGATCTaGAAACCATCAAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQQPLGI*KPSSSK
Trigger: CTTCGAGCTTGATGGTTTCCAGATCCCCAAAGGCTG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCCTTCAGGAACAGCTTaGCCAGGTGCTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIPSGTA*PGACPG
Trigger: GCCTGGGCAAGCACCTGGCCAAGCTGTTCCTGAAGG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCTGAGACTCAGGGATTaGAGAGCAGTCTGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDLRLRD*RAVCVV
Trigger: TACCACACAGACTGCTCTCCAATCCCTGAGTCTCAG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTCCCCTGCCCCTCACCTaGACCAGACCCAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPPLPLT*TRPSGL
Trigger: AAGCCCACTGGGTCTGGTCCAGGTGAGGGGCAGGGG...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACCAATCTGCAAGCCCGTaGCAGGAAGAGTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNQSASP*QEEFCG
Trigger: CCCACAAAACTCTTCCTGCCACGGGCTTGCAGATTG...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACCTCCTGGTACACGTTaGTGGCCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEPPGTR*WPRGGC
Trigger: GCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACTGTGCAGGATGCCATaGGCCCGCAGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISELCRMP*ARSSSR
Trigger: GCGGGATGAGCTGCGGGCTCATGGCATCCTGCACAG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCACTGTAGCACGCGCTaGCACCTAACACTGTCACGG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPHCSTR*HLTLSR
Trigger: CCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGCCAGTGCACTGGGGTaGACAGGGGCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLASALG*TGAKQE
Trigger: TTCCTGTTTGGCCCCTGTTCACCCCAGTGCACTGGC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCACCCAGCGGGGCAAATaGTCCTTCTTTCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVTQRGK*SFFPPS
Trigger: TGAGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGT...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTTCTTCTCACTGCCTTTaGGACCCAGCGGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSSSHCL*DPAGQM
Trigger: CATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGA...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGATCTCACTAGAGAGCTaGAAGGAGGGACCAATTACA +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPISLES*KEGPIT
Trigger: TGTAATTGGTCCCTCCTTTCAGCTCTCTAGTGAGAT...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTAATGCTAGCTGTATaGAACACACACGCACACGCA +
Preference number: 4 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLLMLAV*NTHAHA
Trigger: TGCGTGTGCGTGTGTGTTTCATACAGCTAGCATTAG...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGCAACATGCGGGTGCTaGGAGGCCACTCGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPATCGC*EATRCS
Trigger: TGAGCACCGAGTGGCCTCGCAGCACCCGCATGTTGC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCGGAAGGTCAGCTTCTaGGCCTCCTGGTACACGTTG +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEERKVSF*ASWYTL
Trigger: CAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGCACCCGGATGGCCATaGGGAAGGTCAGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPAPGWP*GRSASA
Trigger: CGCAGAAGCTGACCTTCCGCATGGCCATCCGGGTGC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCCGTCCTTCAGCTCCTaGATGGTCATCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIPSFSS*MVISFP
Trigger: CGGGAAGGAGATGACCATGCAGGAGCTGAAGGACGG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCCGTCCTTCAGCTCCTaGATGGTCATCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPPSFSS*MVISFP
Trigger: CGGGAAGGAGATGACCATGCAGGAGCTGAAGGACGG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTTCCAGCACAGTGGGGTaGTTCAGCAGCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSSSTVG*FSSCMM
Trigger: CATCATGCAGCTGCTGAAGCACCCCACTGTGCTGGA...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGCTTGGCCAGGTGCTTaGCCAGGCAGGTCCGGACAC +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFAWPGA*PGRSGH
Trigger: GTGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCACACTGTCACGGGCATaGAGAGCCCCTGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFTLSRA*RAPATP
Trigger: GGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGT...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACTTGCGCTTGTTGCGGTaGATGTCGCCAATGGAATTG +
Preference number: 4 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNLRLLR*MSPMEL
Trigger: CAATTCCATTGGCGACATCCACCGCAACAAGCGCAA...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTCCAGCAGCACCCGGATaGCCATGCGGAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPPAAPG*PCGRSA
Trigger: AGCTGACCTTCCGCATGGCCATCCGGGTGCTGCTGG...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTGCTTCTCCAGCACAGTaGGGTGCTTCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPASPAQ*GASAAA
Trigger: TGCAGCTGCTGAAGCACCCCACTGTGCTGGAGAAGC...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGGCTTCTCCAGCACAGTaGGGTGCTTCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEASPAQ*GASAAA
Trigger: TGCAGCTGCTGAAGCACCCCACTGTGCTGGAGAAGC...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGACGGGCGCTGTGTCATaGGTGTCCCGGATGCTATAC +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEETGAVS*VSRMLY
Trigger: GTATAGCATCCGGGACACCCATGACACAGCGCCCGT...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCAAGGGAGGGCAAGTATaGGGGCCACTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFKGGQV*GPLALP
Trigger: GGGGAGGGCGAGTGGCCCCCATACTTGCCCTCCCTT...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCACTGGTGAGGGAGGGTaGGAACCGTGGCATAGGGAA +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSITGEGG*EPWHRE
Trigger: TTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGACTGGTGAGGGAGGGTaGGAACCGTGGCATAGGGAA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEETGEGG*EPWHRE
Trigger: TTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGT...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTCAGGGGATGGGAAGGTaGGGGTGTCAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPQGMGR*GCQCTC
Trigger: GCAGGTGCACTGACACCCCCACCTTCCCATCCCCTG...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGTTCAACCCTAGGCCCTaGGGGCTGGGTTTGACCAGA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEFNPRP*GLGLTR
Trigger: TCTGGTCAAACCCAGCCCCCAGGGCCTAGGGTTGAA...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGTCAGTCAAAAACAATTaGTTCAGGGCCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPSVKNN*FRASWI
Trigger: GATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGA...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCACACGTTCACGTCTTTaGACACGGGCGCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVTRSRL*TRALCH
Trigger: ATGACACAGCGCCCGTGTTCAAAGACGTGAACGTGT...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTAATTGTCCAAACTGGTaGGGGAGGGTGGGAACCGTG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPNCPNW*GRVGTV
Trigger: CACGGTTCCCACCCTCCCTCACCAGTTTGGACAATT...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTACACAGGCTAGGGCATaGAGGGGAGGAGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPTQARA*RGGDVH
Trigger: GTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGT...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACCTGGGGGCTGGGTTTaGCCAGAGACCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEPGGWV*PETPSS
Trigger: AGAGGAAGGGGTCTCTGGTCAAACCCAGCCCCCAGG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTACTTCAGTCCAGGAGTaGGGCTCCGAGATTAAACCC +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSTSVQE*GSEIKP
Trigger: GGGTTTAATCTCGGAGCCTCACTCCTGGACTGAAGT...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCCTGATCAGGGTTTTTaGCAGGAGAGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIPDQGF*QEREEA
Trigger: TGCCTCCTCCCTCTCCTGTCAAAAACCCTGATCAGG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCCAGTGGGCTTGTCTaGAGTTCCACTTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSPSGLV*SSTYCS
Trigger: AGAGCAGTAAGTGGAACTTCAGACAAGCCCACTGGG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGGCCGCCCCAACAAATaGGTCTTGAACACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIGRPNK*VLNTLP
Trigger: TGGCAACGTGTTCAAGACGCATTTGTTGGGGCGGCC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGCACCCGGATGGCCATaGGGAAGGTCAGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFAPGWP*GRSASA
Trigger: CGCAGAAGCTGACCTTCCGCATGGCCATCCGGGTGC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAGCACCCGGATGGCCATaGGGAAGGTCAGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEAPGWP*GRSASA
Trigger: CGCAGAAGCTGACCTTCCGCATGGCCATCCGGGTGC...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCGTCCAAGTAGTCCTTaGCCTGTGTGCACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIRPSSP*PVCTAA
Trigger: AGCTGCAGTGCACACAGGGCAAGGACTACTTGGACG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGTCATCTCCTTCCCGTaGTCCTTGCTGCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSVISFP*SLLLSM
Trigger: CATTGAGAGCAGCAAGGAGCACGGGAAGGAGATGAC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCCCGTCCTTCAGCTCCTaGATGGTCATCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLPSFSS*MVISFP
Trigger: CGGGAAGGAGATGACCATGCAGGAGCTGAAGGACGG...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTTCTGCTACCCAGGATaGTGTTCCTGGGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPFCYPG*CSWADA
Trigger: TGCGTCTGCCCAGGAACAGCATCCTGGGTAGCAGAA...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAATGGAGTCAGGGCCAGTaGACTGGGGTGAACAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEWSQGQ*TGVNRG
Trigger: GCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCA...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCCAGCAGCACCCGGATaGCCATGCGGAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFPAAPG*PCGRSA
Trigger: AGCTGACCTTCCGCATGGCCATCCGGGTGCTGCTGG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACCAGCAGCACCCGGATaGCCATGCGGAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEPAAPG*PCGRSA
Trigger: AGCTGACCTTCCGCATGGCCATCCGGGTGCTGCTGG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAATGCTGGCGCTGGCCGTaGTGGCATAGGCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISECWRWP*WHRPQR
Trigger: TCTTTGCGGCCTATGCCACCACGGCCAGCGCCAGCA...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGGGCAGGATCTCGTTCTaGTTGGAGTCCAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEGRISF*LESRPK
Trigger: CTTTGGCCTGGACTCCAACCAGAACGAGATCCTGCC...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCAGGAATGGGGCCCACTaGCTTTGGGTAGGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLRNGAH*LWVGFA
Trigger: GGCAAACCCTACCCAAAGCCAGTGGGCCCCATTCCT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCCCAGTCATCCCGACTaGCCAGTTTTCAACCCAATC +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVPSHPD*PVFNPI
Trigger: GATTGGGTTGAAAACTGGCCAGTCGGGATGACTGGG...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGCAGCGATCGGGGACTaGCATGTCCTTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVAAIGD*HVLHSS
Trigger: AGAAGAATGAAGGACATGCCAGTCCCCGATCGCTGC...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGCAGCGATCGGGGACTaGCATGTCCTTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSAAIGD*HVLHSS
Trigger: AGAAGAATGAAGGACATGCCAGTCCCCGATCGCTGC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCTGGACCAGACCCAGTaGGCTTGTCTGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSILDQTQ*ACLKFH
Trigger: GTGGAACTTCAGACAAGCCCACTGGGTCTGGTCCAG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGGGCGGGCAGCACATaGGCCGCGGGCCTTAGGCGG +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGAGST*AAGLRR
Trigger: CCGCCTAAGGCCCGCGGCTCATGTGCTGCCCGCCCC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTACTTCAGTCCAGGAGTaGGGCTCCGAGATTAAACCC +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPTSVQE*GSEIKP
Trigger: GGGTTTAATCTCGGAGCCTCACTCCTGGACTGAAGT...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGCCAGTGCACTGGGGTaGACAGGGGCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFASALG*TGAKQE
Trigger: TTCCTGTTTGGCCCCTGTTCACCCCAGTGCACTGGC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAATCAACCCAATCCCCCTaGCAAACCGCACGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISESTQSP*QTARSR
Trigger: GCGGCTACGTGCGGTTTGTCAGGGGGATTGGGTTGA...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCTATGTTGCAAGCTTTaGCAAGTCTTTACCCATTCT +
Preference number: 4 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFLCCKL*QVFTHS
Trigger: AGAATGGGTAAAGACTTGTCAAAGCTTGCAACATAG...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCTTGCCCTGTGTGCACTaGAGCTTCTCCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFLPCVH*SFSRMA
Trigger: GGCCATCCGGGAGAAGCTGCAGTGCACACAGGGCAA...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGTCATCTCCTTCCCGTaGTCCTTGCTGCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIVISFP*SLLLSM
Trigger: CATTGAGAGCAGCAAGGAGCACGGGAAGGAGATGAC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCGCCACTGTGCAGGATaGCATGAGCCCGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFRHCAG*HEPAAH
Trigger: ATGAGCTGCGGGCTCATGGCATCCTGCACAGTGGCG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTGAAAGTGCTTCAATCTaGAAGCCCGTGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSESASI*KPVAGR
Trigger: TCTTCCTGCCACGGGCTTGCAGATTGAAGCACTTTC...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAGCAGGGTCACGGTGGTaGCCAGAACACAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEAGSRW*PEHKRQ
Trigger: CTGGCGTTTGTGTTCTGGGCACCACCGTGACCCTGC...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTGGATCCCTTGGGGATaGGCAGCTTGCAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLWIPWG*AACSSC
Trigger: ACAAGAGCTGCAAGCTGCCCATCCCCAAGGGATCCA...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTCACCAGCTGGATCTTaGGCAGGTAACTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLSPAGS*AGNSPG
Trigger: CCCTGGAGAGTTACCTGCCCAAGATCCAGCTGGTGA...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTAGCTTCTGCGCCTCCTaGTACACGTTGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPSFCAS*YTLMAS
Trigger: CGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCT...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTACGGGCGCTGTGTCATaGGTGTCCCGGATGCTATAC +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPTGAVS*VSRMLY
Trigger: GTATAGCATCCGGGACACCCATGACACAGCGCCCGT...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTTGGTTCAGCAGGGGATaGGAAGGTGGGGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPWFSRG*EGGGVS
Trigger: ACTGACACCCCCACCTTCCCATCCCCTGCTGAACCA...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCCAAACAGGAAATCGTaGCCGCCTCCAAATCTACCT +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVPNRKS*PPPNLP
Trigger: AGGTAGATTTGGAGGCGGCCACGATTTCCTGTTTGG...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATTGGTTCAGGGCCAGCTaGATCAGTTTAAAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDWFRAS*ISLKEN
Trigger: ATTTTCCTTTAAACTGATCCAGCTGGCCCTGAACCA...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTCAATCTGCAAGCCCGTaGCAGGAAGAGTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPQSASP*QEEFCG
Trigger: CCCACAAAACTCTTCCTGCCACGGGCTTGCAGATTG...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACCAGGGCCTCGTGGCTaGAGATCTTGGAGAAGACCT +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEPGPRG*RSWRRP
Trigger: AGGTCTTCTCCAAGATCTTCAGCCACGAGGCCCTGG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCACTGTAGCACGCGCTaGCACCTAACACTGTCACGG +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFHCSTR*HLTLSR
Trigger: CCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACACTGTAGCACGCGCTaGCACCTAACACTGTCACGG +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEHCSTR*HLTLSR
Trigger: CCGTGACAGTGTTAGGTGTCAGCGCGTGCTACAGTG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTACCCAGCGGGGCAAATaGTCCTTCTTTCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPTQRGK*SFFPPS
Trigger: TGAGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGT...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCAGCTGCCACAGCTGCTaGGACACGGCCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASSCHSC*DTASSS
Trigger: GCTGCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCT...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCACACTGTCACGGGCATaGAGAGCCCCTGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASTLSRA*RAPATP
Trigger: GGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGT...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCGGAGACGCTGAAGAGTaGGCCCAAGGGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASGDAEE*AQGGTA
Trigger: AGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCC...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGCCCAACATCGAAAGTaGTTCAATCTGCAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIAQHRK*FNLQAR
Trigger: ACGGGCTTGCAGATTGAAGCACTTTCGATGTTGGGC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAATCTTGGAGAAGACCTaGAGCAGCCAGTGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEILEKT*SSQWPV
Trigger: GACCGGCCACTGGCTGCTGCAGGTCTTCTCCAAGAT...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTCCTTCAGCTCCTGCATaGTCATCTCCTTCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPPSAPA*SSPSRA
Trigger: AGCACGGGAAGGAGATGACCATGCAGGAGCTGAAGG...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCAGCCTTTGGGGATCTaGAAACCATCAAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEQPLGI*KPSSSK
Trigger: CTTCGAGCTTGATGGTTTCCAGATCCCCAAAGGCTG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCGGGGGAAGGTCCGTGTaGCCAGCTCAAAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASGGRSV*PAQSGW
Trigger: CCAGCCGCTTTGAGCTGGCCACACGGACCTTCCCCC...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCGCAGTCTGTGTGGTATaGGCCCGTTCCTATAGTCTA +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIAVCVV*ARSYSL
Trigger: TAGACTATAGGAACGGGCCCATACCACACAGACTGC...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGGAGAGCAGTCTGTGTaGTATGGGCCCGTTCCTATA +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLGEQSV*YGPVPI
Trigger: TATAGGAACGGGCCCATACCACACAGACTGCTCTCC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTAATATTATAGCCATCTaGGCAGGGTCACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPNIIAI*AGSRWC
Trigger: GCACCACCGTGACCCTGCCCAGATGGCTATAATATT...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAACACAGGCTAGGGCATaGAGGGGAGGAGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISETQARA*RGGDVH
Trigger: GTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGT...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACCTGATCAGGGTTTTTaGCAGGAGAGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEPDQGF*QEREEA
Trigger: TGCCTCCTCCCTCTCCTGTCAAAAACCCTGATCAGG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTCCCAGTGGGCTTGTCTaGAGTTCCACTTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPPSGLV*SSTYCS
Trigger: AGAGCAGTAAGTGGAACTTCAGACAAGCCCACTGGG...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTATCTCACTAGAGAGCTaGAAGGAGGGACCAATTACA +
Preference number: 4 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSISLES*KEGPIT
Trigger: TGTAATTGGTCCCTCCTTTCAGCTCTCTAGTGAGAT...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCTAATGCTAGCTGTATaGAACACACACGCACACGCA +
Preference number: 4 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEELMLAV*NTHAHA
Trigger: TGCGTGTGCGTGTGTGTTTCATACAGCTAGCATTAG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCGTCCAAGTAGTCCTTaGCCTGTGTGCACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFRPSSP*PVCTAA
Trigger: AGCTGCAGTGCACACAGGGCAAGGACTACTTGGACG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAATCCAGCACAGTGGGGTaGTTCAGCAGCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISESSTVG*FSSCMM
Trigger: CATCATGCAGCTGCTGAAGCACCCCACTGTGCTGGA...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCAACAGCTTGGCCAGGTaGTTGCCCAGGCAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASNSLAR*LPRQVR
Trigger: CCGGACCTGCCTGGGCAAGCACCTGGCCAAGCTGTT...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCGCCCAACATCGAAAGTaGTTCAATCTGCAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLAQHRK*FNLQAR
Trigger: ACGGGCTTGCAGATTGAAGCACTTTCGATGTTGGGC...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCTGGATCCCTTGGGGATaGGCAGCTTGCAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFWIPWG*AACSSC
Trigger: ACAAGAGCTGCAAGCTGCCCATCCCCAAGGGATCCA...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACCTTCAGCTCCTGCATaGTCATCTCCTTCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEPSAPA*SSPSRA
Trigger: AGCACGGGAAGGAGATGACCATGCAGGAGCTGAAGG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCACCCCGCTGCCTGGGCTaGGCTGAGGCGGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISPRCLG*AEAGGS
Trigger: AGACCCACCCGCCTCAGCCCAGCCCAGGCAGCGGGG...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCAATATTATAGCCATCTaGGCAGGGTCACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLNIIAI*AGSRWC
Trigger: GCACCACCGTGACCCTGCCCAGATGGCTATAATATT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CAA 72 bp GAGGGGGTACAGGTCCGGGTGCACCATGTAGCTATGTaGCAAGCTTTGACAAGTCTTTACCCATTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EGVQVRVHHVAM*QALTSLYPFWP
Trigger: AGGCCAGAATGGGTAAAGACTTGTCAAAGCTTGCAACATAGCTACATGGTGCACCCGGACCTGTACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCCCAACAAATGCGTCTTaGACACGTTGCCATACTTCT +
Preference number: 4 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIPTNAS*TRCHTS
Trigger: AGAAGTATGGCAACGTGTTCAAGACGCATTTGTTGG...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR TCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTAGCGCAGCCCACTaGGCGTGTCCAGGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGSAAH*ACPGAV
Trigger: CACTGCGCCTGGACACGCTCAGTGGGCTGCGCTACC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCTTGCCCTGTGTGCACTaGAGCTTCTCCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASLPCVH*SFSRMA
Trigger: GGCCATCCGGGAGAAGCTGCAGTGCACACAGGGCAA...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCCCCCATACTCACGCCTaGAGTCAGGGCCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASPHTHA*SQGQCT
Trigger: AGTGCACTGGCCCTGACTCCAGGCGTGAGTATGGGG...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCCCAGTCATCCCGACTaGCCAGTTTTCAACCCAATC +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFPSHPD*PVFNPI
Trigger: GATTGGGTTGAAAACTGGCCAGTCGGGATGACTGGG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGCAGTCTGTGTGGTATaGGCCCGTTCCTATAGTCTA +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPAVCVV*ARSYSL
Trigger: TAGACTATAGGAACGGGCCCATACCACACAGACTGC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCTGGTTCAGGGCCAGCTaGATCAGTTTAAAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVWFRAS*ISLKEN
Trigger: ATTTTCCTTTAAACTGATCCAGCTGGCCCTGAACCA...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACAATCTGCAAGCCCGTaGCAGGAAGAGTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISEQSASP*QEEFCG
Trigger: CCCACAAAACTCTTCCTGCCACGGGCTTGCAGATTG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGCCTCCAAATCTACCTaGTCAGGGTTTTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPASKST*SGFLTG
Trigger: TCCTGTCAAAAACCCTGATCAGGTAGATTTGGAGGC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCTATGTTGCAAGCTTTaGCAAGTCTTTACCCATTCT +
Preference number: 4 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVLCCKL*QVFTHS
Trigger: AGAATGGGTAAAGACTTGTCAAAGCTTGCAACATAG...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTAGCTGCCACAGCTGCTaGGACACGGCCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTISCHSC*DTASSS
Trigger: GCTGCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCT...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCAGCTTCTGCGCCTCCTaGTACACGTTGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASSFCAS*YTLMAS
Trigger: CGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCT...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTAAGGGAGGGCAAGTATaGGGGCCACTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIKGGQV*GPLALP
Trigger: GGGGAGGGCGAGTGGCCCCCATACTTGCCCTCCCTT...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCCAAACAGGAAATCGTaGCCGCCTCCAAATCTACCT +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFPNRKS*PPPNLP
Trigger: AGGTAGATTTGGAGGCGGCCACGATTTCCTGTTTGG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCCAGTTTAAAGGAAAATaGACCTCCCAGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLQFKGK*TSQTLV
Trigger: AACCAGTGTCTGGGAGGTTCATTTTCCTTTAAACTG...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCTCTTCTCACTGCCTTTaGGACCCAGCGGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASSSHCL*DPAGQM
Trigger: CATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGA...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCTAATGCTAGCTGTATaGAACACACACGCACACGCA +
Preference number: 4 (lower is better)
Translates to: ASQIANTQNASGRSYSSFLMLAV*NTHAHA
Trigger: TGCGTGTGCGTGTGTGTTTCATACAGCTAGCATTAG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCGGCAGGATCTCGTTCTaGTTGGAGTCCAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASGRISF*LESRPK
Trigger: CTTTGGCCTGGACTCCAACCAGAACGAGATCCTGCC...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGGGCCCACTGGCTTTaGGTAGGGTTTGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGAHWL*VGFARE
Trigger: CTCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCGGGCTAAGCAGACAGTaGCATAGAGGTGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASGLSRQ*HRGGRD
Trigger: GTCCCTTCCACCTCTATGCCACTGTCTGCTTAGCCC...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCACACGTTCACGTCTTTaGACACGGGCGCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASTRSRL*TRALCH
Trigger: ATGACACAGCGCCCGTGTTCAAAGACGTGAACGTGT...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCGTCATCTCCTTCCCGTaGTCCTTGCTGCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASVISFP*SLLLSM
Trigger: CATTGAGAGCAGCAAGGAGCACGGGAAGGAGATGAC...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTCTCTTCAGCTTCAGCTaGGGCAGCCTTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTILFSFS*GSLPAA
Trigger: AGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAG...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCACAGGGGATGGGAAGGTaGGGGTGTCAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISQGMGR*GCQCTC
Trigger: GCAGGTGCACTGACACCCCCACCTTCCCATCCCCTG...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAATCAGTCAAAAACAATTaGTTCAGGGCCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISESVKNN*FRASWI
Trigger: GATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGA...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
3UTR CAA 72 bp AGGACAGAACAAGTAGCAGCAATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAGGGTGGGAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: RTEQVAAIGNFK*SKLVREGGNRG
Trigger: GCCACGGTTCCCACCCTCCCTCACCAGTTTGGACAATTTGAAATTACCTATTGCTGCTACTTGTTCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTCCAGGGCCTCGTGGCTaGAGATCTTGGAGAAGACCT +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIPGPRG*RSWRRP
Trigger: AGGTCTTCTCCAAGATCTTCAGCCACGAGGCCCTGG...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCATGGGCAGGGTCACGGTaGTGCCCAGAACACAAACGC +
Preference number: 4 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISWAGSR*CPEHKR
Trigger: GCGTTTGTGTTCTGGGCACCACCGTGACCCTGCCCA...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR TCA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAACTATGTTGCAAGCTTTaGCAAGTCTTTACCCATTCT +
Preference number: 4 (lower is better)
Translates to: GRRCSLQTPASPRFSISELCCKL*QVFTHS
Trigger: AGAATGGGTAAAGACTTGTCAAAGCTTGCAACATAG...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR TCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTACCCAGCGGGGCAAATaGTCCTTCTTTCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTITQRGK*SFFPPS
Trigger: TGAGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGT...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTCTCTCCAGGGCCTCGTaGCTGAAGATCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTILSRAS*LKILEK
Trigger: CTTCTCCAAGATCTTCAGCCACGAGGCCCTGGAGAG...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTCCTTCAGCTCCTGCATaGTCATCTCCTTCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIPSAPA*SSPSRA
Trigger: AGCACGGGAAGGAGATGACCATGCAGGAGCTGAAGG...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAACTGGTGAGGGAGGGTaGGAACCGTGGCATAGGGAA +
Preference number: 4 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISTGEGG*EPWHRE
Trigger: TTCCCTATGCCACGGTTCCCACCCTCCCTCACCAGT...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCATGGTTCAGCAGGGGATaGGAAGGTGGGGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISWFSRG*EGGGVS
Trigger: ACTGACACCCCCACCTTCCCATCCCCTGCTGAACCA...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGGCTAAGCAGACAGTaGCATAGAGGTGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGLSRQ*HRGGRD
Trigger: GTCCCTTCCACCTCTATGCCACTGTCTGCTTAGCCC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR GCA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCAAGACCTTGCGCTTGTTaGGGTGGATGTCGCCAATGG +
Preference number: 4 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISRPCAC*GGCRQW
Trigger: CCATTGGCGACATCCACCGCAACAAGCGCAAGGTCT...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CCA 90 bp TCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGTTCAGGGCCAGCTCAGTCAAAAACAATTaGTTCAGGGCCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: STYCSPRYSVKNNWFRASSVKNN*FRASWI
Trigger: GATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGA...GCTGGCCCTGAACCAATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGATCTCGTTCTGGTTaGAGTCCAGGCCAAAGAACT +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGSRSG*SPGQRT
Trigger: AGTTCTTTGGCCTGGACTCCAACCAGAACGAGATCC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTAATATTATAGCCATCTaGGCAGGGTCACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTINIIAI*AGSRWC
Trigger: GCACCACCGTGACCCTGCCCAGATGGCTATAATATT...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CCA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTTGGTTCAGGGCCAGCTaGATCAGTTTAAAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIWFRAS*ISLKEN
Trigger: ATTTTCCTTTAAACTGATCCAGCTGGCCCTGAACCA...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS GCA 90 bp CAGCTCTTGTCGCGAGTGGCGGCCCAGCGCAGCTGCCACAGCTGCTaGGACACGGCCAGCAGCAGCGTCACGGACACCAGGCACGCGGCG +
Preference number: 5 (lower is better)
Translates to: QLLSRVAAQRSCHSC*DTASSSVTDTRHAA
Trigger: CGCCGCGTGCCTGGTGTCCGTGACGCTGCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS GCA 90 bp TTGCAGCTCTTGTCGCGAGTGGCGGCCCAGCGCAGCTGCCACAGCTaGTGCGACACGGCCAGCAGCAGCGTCACGGACACCAGGCACGCG +
Preference number: 5 (lower is better)
Translates to: LQLLSRVAAQRSCHS*CDTASSSVTDTRHA
Trigger: CGCGTGCCTGGTGTCCGTGACGCTGCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCTGCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTTGGAAGCGGCCATCCTaGTCCTCGCTCCGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGAGGGDAEECAQGGTALWKRPS*SSLRAW
Trigger: CCAGGCGCGGAGCGAGGACAAGGATGGCCGCTTCCA...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS TCA 90 bp CGCAGTGTGCCCTCGCAGGGGCAGCCGCCACTGTGCAGGATGCCATaGGCCCGCAGCTCATCCCGCAGCTTCTCCAGCACAGTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: RSVPSQGQPPLCRMP*ARSSSRSFSSTVGC
Trigger: GCACCCCACTGTGCTGGAGAAGCTGCGGGATGAGCTGCGGGCTCATGGCATCCTGCACAGTGGCGGCTGCCCCTGCGAGGGCACACTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS GCA 90 bp ATGGGCAGCTTGCAGCTCTTGTCGCGAGTGGCGGCCCAGCGCAGCTaGCACAGCTGCTGCGACACGGCCAGCAGCAGCGTCACGGACACC +
Preference number: 5 (lower is better)
Translates to: MGSLQLLSRVAAQRS*HSCCDTASSSVTDT
Trigger: GGTGTCCGTGACGCTGCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCTGCAAGCTGCCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS GCA 90 bp CCAGGCGCAGTGTGCCCTCGCAGGGGCAGCCGCCACTGTGCAGGATaGCATGAGCCCGCAGCTCATCCCGCAGCTTCTCCAGCACAGTGG +
Preference number: 5 (lower is better)
Translates to: PGAVCPRRGSRHCAG*HEPAAHPAASPAQW
Trigger: CCACTGTGCTGGAGAAGCTGCGGGATGAGCTGCGGGCTCATGGCATCCTGCACAGTGGCGGCTGCCCCTGCGAGGGCACACTGCGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTGGGCCTGGGGCTCCTTaGCCCCAAGGTCAGAGGACA +
Preference number: 5 (lower is better)
Translates to: GGAGGGDAEECAQGGTALGPGAP*PQGQRT
Trigger: TGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCCC...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 90 bp CCATGGATCCCTTGGGGATGGGCAGCTTGCAGCTCTTGTCGCGAGTaGCGGCCCAGCGCAGCTGCCACAGCTGCTGCGACACGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PWIPWGWAACSSCRE*RPSAAATAAATRPA
Trigger: TGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGATCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS-3UTR CAA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCGGCAGCTTGCAGCTCTaGTCGCGAGTGGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFGSLQL*SRVAAQ
Trigger: CTGGGCCGCCACTCGCGACAAGAGCTGCAAGCTGCC...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CAA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCTGGAAGCGGCCATCCTaGTCCTCGCTCCGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPWKRPS*SSLRAW
Trigger: CCAGGCGCGGAGCGAGGACAAGGATGGCCGCTTCCA...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 90 bp ACACGGCCAGCAGCAGCGTCACGGACACCAGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAGATCCAAGCCCTCAAAGAGCATGTTGG +
Preference number: 5 (lower is better)
Translates to: TRPAAASRTPGTRRG*PAPTPDPSPQRACW
Trigger: CCAACATGCTCTTTGAGGGCTTGGATCTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCCTGGTGTCCGTGACGCTGCTGCTGGCCGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS CCA 90 bp AGCAGCACCCGGATGGCCATGCGGAAGGTCAGCTTCTGCGCCTCCTaGTACACGTTGATGGCCTCGGGGTGGCTGCTCCAGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SSTRMAMRKVSFCAS*YTLMASGWLLQARS
Trigger: ACTGCGCGCCTGGAGCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCGCATGGCCATCCGGGTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000474509.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTAAGCCCATGGATCCCTaGGGGATGGGCAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GGAGGGDAEECAQGGTALKPMDP*GMGSLQ
Trigger: CTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCTT...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CAA 90 bp AGCTCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCAGCTTGGCCAGGTGCTaGCCCAGGCAGGTCCGGACA +
Preference number: 5 (lower is better)
Translates to: SSEAELPLRSPPPRFRLFSLARC*PRQVRT
Trigger: TGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGCT...GAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACTGGGGCCCACTGGCTTaGGGTAGGGTTTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: AASSASAAAAFPQLSGDHWGPLA*GRVCQG
Trigger: TCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCCA...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS TCA 90 bp GGATGGCCATGCGGAAGGTCAGCTTCTGCGCCTCCTGGTACACGTTaGTGGCCTCGGGGTGGCTGCTCCAGGCGCGCAGTGTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GWPCGRSASAPPGTR*WPRGGCSRRAVCPG
Trigger: TCCAGGACACACTGCGCGCCTGGAGCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCGCATGGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000474509.1
ENST00000546307.5
CDS GCA 90 bp CTGAAGCCCAGCAGCACCCGGATGGCCATGCGGAAGGTCAGCTTCTaGGCCTCCTGGTACACGTTGATGGCCTCGGGGTGGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LKPSSTRMAMRKVSF*ASWYTLMASGWLLQ
Trigger: CTGGAGCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCGCATGGCCATCCGGGTGCTGCTGGGCTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000474509.1
ENST00000546307.5
CDS GCA 90 bp CCAGCTCCACCGCCAGCACCTTCAGGAACAGCTTGGCCAGGTGCTTaGCCAGGCAGGTCCGGACACCGCCACCGAACGGGAGGTAATGGA +
Preference number: 5 (lower is better)
Translates to: PAPPPAPSGTAWPGA*PGRSGHRHRTGGNG
Trigger: TCCATTACCTCCCGTTCGGTGGCGGTGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGCTGTTCCTGAAGGTGCTGGCGGTGGAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTTCCTTCCCGTGCTCCTaGCTGCTCTCAATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GGAGGGDAEECAQGGTALSFPCS*LLSMRR
Trigger: CCTCCTCATTGAGAGCAGCAAGGAGCACGGGAAGGA...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTTCCAGGCCAAAGAACTaGACGCTGAGGCCATCCACG +
Preference number: 5 (lower is better)
Translates to: GGAGGGDAEECAQGGTALSRPKN*TLRPST
Trigger: CGTGGATGGCCTCAGCGTCAAGTTCTTTGGCCTGGA...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGGGCCTGGGGCTCCTTaGCCCCAAGGTCAGAGGACA +
Preference number: 5 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQGPGAP*PQGQRT
Trigger: TGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCCC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS GCA 90 bp GGATGTCGCCAATGGAATTGGACACCGTGTTGGGGCCCAGCAACATaGGGGTGCTGCGAGGCCACTCGGTGCTCACGAGGTGGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: GCRQWNWTPCWGPAT*GCCEATRCSRGGAR
Trigger: GCGAGCACCACCTCGTGAGCACCGAGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CCA 90 bp TGGGCTGAGGCGGGTGGGTCTTGGGTTAGACTGTGGCGCTCAGCATaGCCTCCGTCTCCGGCAGGATCTCGTTCTGGTTGGAGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: WAEAGGSWVRLWRSA*PPSPAGSRSGWSPG
Trigger: GCCTGGACTCCAACCAGAACGAGATCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAGTCTAACCCAAGACCCACCCGCCTCAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGCCCTCAAAGAGCATGTaGGCGGCCGCTCGGGGGATT +
Preference number: 5 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQPSKSM*AAARGI
Trigger: AATCCCCCGAGCGGCCGCCAACATGCTCTTTGAGGG...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATCCCTCAAAGAGCATGTaGGCGGCCGCTCGGGGGATT +
Preference number: 5 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDPSKSM*AAARGI
Trigger: AATCCCCCGAGCGGCCGCCAACATGCTCTTTGAGGG...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CAA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACTCCAGGCCAAAGAACTaGACGCTGAGGCCATCCACG +
Preference number: 5 (lower is better)
Translates to: AASSASAAAAFPQLSGDHSRPKN*TLRPST
Trigger: CGTGGATGGCCTCAGCGTCAAGTTCTTTGGCCTGGA...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGTGGGGCCCACTGGCTTaGGGTAGGGTTTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQWGPLA*GRVCQG
Trigger: TCCCTGGCAAACCCTACCCAAAGCCAGTGGGCCCCA...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCAATCTCCAGGTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGGGAAGACGGAGGCCCTaGCTCCCCGTCAGAAGAACC +
Preference number: 5 (lower is better)
Translates to: AISRLDAAPAPPRLTPVLGRRRP*LPVRRT
Trigger: GGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCC...CAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAACCTGGAGATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGGGAAGACGGAGGCCCTaGCTCCCCGTCAGAAGAACC +
Preference number: 5 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQGRRRP*LPVRRT
Trigger: GGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCC...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS TCA 90 bp CCGCGCCGGTCACGCGTATCAGCGGCCGCCCCAACAAATGCGTCTTaGACACGTTGCCATACTTCTCCCTCCGCGACGACTGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: PRRSRVSAAAPTNAS*TRCHTSPSATTGSQ
Trigger: CTGGCTTCCAGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCATTTGTTGGGGCGGCCGCTGATACGCGTGACCGGCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CCA 90 bp AAGGTCAGCTTCTGCGCCTCCTGGTACACGTTGATGGCCTCGGGGTaGCTGCTCCAGGCGCGCAGTGTGTCCTGGATCACCAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: KVSFCASWYTLMASG*LLQARSVSWITSWI
Trigger: GATCCAGCTGGTGATCCAGGACACACTGCGCGCCTGGAGCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000461519.1
ENST00000474509.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCGGCAGCTTGCAGCTCTaGTCGCGAGTGGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVGSLQL*SRVAAQ
Trigger: CTGGGCCGCCACTCGCGACAAGAGCTGCAAGCTGCC...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGAATTGGACACCGTGTaGGGGCCCAGCAACATGCGG +
Preference number: 5 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDELDTV*GPSNMR
Trigger: CCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp CCATACTCACGCCTGGAGTCAGGGCCAGTGCACTGGGGTGAACAGGGGCCAAACGGAAGACGGAGGCCCTaGCTCCCCGTCAGAAGAACC +
Preference number: 5 (lower is better)
Translates to: PYSRLESGPVHWGEQGPNGRRRP*LPVRRT
Trigger: GGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCC...GTTTGGCCCCTGTTCACCCCAGTGCACTGGCCCTGACTCCAGGCGTGAGTATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 90 bp TGCGCTTGTTGCGGTGGATGTCGCCAATGGAATTGGACACCGTGTTaGGGCCCAGCAACATGCGGGTGCTGCGAGGCCACTCGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: CACCGGCRQWNWTPC*GPATCGCCEATRCS
Trigger: TGAGCACCGAGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS-3UTR CAA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGTGCGTCTTGAACACGTaGCCATACTTCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPCVLNT*PYFSLR
Trigger: GCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCA...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGAGAAGACCTTGCGCTaGTTGCGGTGGATGTCGCCA +
Preference number: 5 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDEKTLR*LRWMSP
Trigger: TGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACAACACGTTCACGTCTTaGAACACGGGCGCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: AASSASAAAAFPQLSGDHNTFTS*NTGAVS
Trigger: TGACACAGCGCCCGTGTTCAAAGACGTGAACGTGTT...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGTCCAGGCCAAAGAACTaGACGCTGAGGCCATCCACG +
Preference number: 5 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQSRPKN*TLRPST
Trigger: CGTGGATGGCCTCAGCGTCAAGTTCTTTGGCCTGGA...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACAGGATCTCGTTCTGGTaGGAGTCCAGGCCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: AASSASAAAAFPQLSGDHRISFW*ESRPKN
Trigger: GTTCTTTGGCCTGGACTCCAACCAGAACGAGATCCT...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCCGCCCCGCCAAGGTaGACTCCTGTTCTGCTACCC +
Preference number: 5 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSPAPPR*TPVLLP
Trigger: GGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCAGGGCAATCTCCAGGTaGGACGCAGCCCCCGCCCCG +
Preference number: 5 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLRAISR*DAAPAP
Trigger: CGGGGCGGGGGCTGCGTCCAACCTGGAGATTGCCCT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCTCTGAGACTCAGGGATaGGAGAGCAGTCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPSETQG*ESSLCG
Trigger: ACCACACAGACTGCTCTCCAATCCCTGAGTCTCAGA...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACTCTGAGACTCAGGGATaGGAGAGCAGTCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: AASSASAAAAFPQLSGDHSETQG*ESSLCG
Trigger: ACCACACAGACTGCTCTCCAATCCCTGAGTCTCAGA...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS TCA 90 bp GCTGGTAGACCTCAAAGAGGTGCCCAAGGTCCTCCTCAGGGATGCTaGAGCCCAGCAGCACCCGGATGGCCATGCGGAAGGTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: AGRPQRGAQGPPQGC*SPAAPGWPCGRSAS
Trigger: AGAAGCTGACCTTCCGCATGGCCATCCGGGTGCTGCTGGGCTTCAGCATCCCTGAGGAGGACCTTGGGCACCTCTTTGAGGTCTACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000474509.1
ENST00000546307.5
CDS CCA 90 bp TGGAGAAGACCTTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATTaGACACCGTGTTGGGGCCCAGCAACATGCGGGTGCTGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: WRRPCACCGGCRQWN*TPCWGPATCGCCEA
Trigger: GGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CCA 90 bp CGTCCAAGTAGTCCTTGCCCTGTGTGCACTGCAGCTTCTCCCGGATaGCCTTCTCCAGCCCCTTCTGCAGGATCTGCCGAGCCTGAATGC +
Preference number: 5 (lower is better)
Translates to: RPSSPCPVCTAASPG*PSPAPSAGSAEPEC
Trigger: GCATTCAGGCTCGGCAGATCCTGCAGAAGGGGCTGGAGAAGGCCATCCGGGAGAAGCTGCAGTGCACACAGGGCAAGGACTACTTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 90 bp ACTGTGGCGCTCAGCATGGCCTCCGTCTCCGGCAGGATCTCGTTCTaGTTGGAGTCCAGGCCAAAGAACTTGACGCTGAGGCCATCCACG +
Preference number: 5 (lower is better)
Translates to: TVALSMASVSGRISF*LESRPKNLTLRPST
Trigger: CGTGGATGGCCTCAGCGTCAAGTTCTTTGGCCTGGACTCCAACCAGAACGAGATCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACACAGAAGACCTTGCGCTTGTaGCGGTGGATGTCGCCAATG +
Preference number: 5 (lower is better)
Translates to: PLQLQLRQPSRSCPETTQKTLRL*RWMSPM
Trigger: CATTGGCGACATCCACCGCAACAAGCGCAAGGTCTT...CTGTGTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCAACACGTTCACGTCTTaGAACACGGGCGCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPNTFTS*NTGAVS
Trigger: TGACACAGCGCCCGTGTTCAAAGACGTGAACGTGTT...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 90 bp AAATGCGTCTTGAACACGTTGCCATACTTCTCCCTCCGCGACGACTaGAAGCCAGAACCCTGCGGGAGCCACACCCGGGTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: KCVLNTLPYFSLRDD*KPEPCGSHTRVSLR
Trigger: CCTGAGAGAGACCCGGGTGTGGCTCCCGCAGGGTTCTGGCTTCCAGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461519.1
CDS-3UTR CAA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCAGCTTGGCCAGGTGCTaGCCCAGGCAGGTCCGGACA +
Preference number: 5 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLSLARC*PRQVRT
Trigger: TGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGCT...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATAGGATCTCGTTCTGGTaGGAGTCCAGGCCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDRISFW*ESRPKN
Trigger: GTTCTTTGGCCTGGACTCCAACCAGAACGAGATCCT...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCCGCCTCTTCAGCTTCAGCTGCGGCAGCCTTCCCGCAGCTGTCCGGAGACCACCTCAGTCAAAAACAATaGGTTCAGGGCCAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: AASSASAAAAFPQLSGDHLSQKQ*VQGQLD
Trigger: ATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGAG...GTGGTCTCCGGACAGCTGCGGGAAGGCTGCCGCAGCTGAAGCTGAAGAGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp TCCGAGGCAGAACTGCCGCTGCGCTCACCTCCCCCACGCTTTCGCCTCTTCCCCCTCAGTCAAAAACAATaGGTTCAGGGCCAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: SEAELPLRSPPPRFRLFPLSQKQ*VQGQLD
Trigger: ATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGAG...GGGGAAGAGGCGAAAGCGTGGGGGAGGTGAGCGCAGCGGCAGTTCTGCCTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATTCGTGGCTGAAGATCTaGGAGAAGACCTTCGCCAAG +
Preference number: 5 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDSWLKI*EKTFAK
Trigger: CTTGGCGAAGGTCTTCTCCAAGATCTTCAGCCACGA...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412253.1
CDS TCA 90 bp GCTCCTGCATGGTCATCTCCTTCCCGTGCTCCTTGCTGCTCTCAATaGGGAGGTCCAGGGCGTCCAAGTAGTCCTTGCCCTGTGTGCACT +
Preference number: 5 (lower is better)
Translates to: APAWSSPSRAPCCSQ*GGPGRPSSPCPVCT
Trigger: AGTGCACACAGGGCAAGGACTACTTGGACGCCCTGGACCTCCTCATTGAGAGCAGCAAGGAGCACGGGAAGGAGATGACCATGCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATATGACACTCCAGCCTTaGGGGATCTGGAAACCATCA +
Preference number: 5 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDMTLQP*GIWKPS
Trigger: TGATGGTTTCCAGATCCCCAAAGGCTGGAGTGTCAT...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAATGGAAGCGGCCATCCTaGTCCTCGCTCCGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRRCSLQTPASPRFSISEWKRPS*SSLRAW
Trigger: CCAGGCGCGGAGCGAGGACAAGGATGGCCGCTTCCA...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTAGCTTGGCCAGGTGCTaGCCCAGGCAGGTCCGGACA +
Preference number: 5 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPSLARC*PRQVRT
Trigger: TGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGCT...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGTGGGAACCGTGGCATAGGGAAGGGCAATCTCCAGGTTGGACGCAGCCCCCGCTCAGTCAAAAACAATaGGTTCAGGGCCAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: GWEPWHREGQSPGWTQPPLSQKQ*VQGQLD
Trigger: ATCCAGCTGGCCCTGAACCAATTGTTTTTGACTGAG...CGGGGGCTGCGTCCAACCTGGAGATTGCCCTTCCCTATGCCACGGTTCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 90 bp AGATCTTGGAGAAGACCTTGCGCTTGTTGCGGTGGATGTCGCCAATaGAATTGGACACCGTGTTGGGGCCCAGCAACATGCGGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSWRRPCACCGGCRQ*NWTPCWGPATCGCC
Trigger: GCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS-3UTR CAA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTATGTCGCCAATGGAATaGGACACCGTGTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPMSPME*DTVLGP
Trigger: GGGCCCCAACACGGTGTCCAATTCCATTGGCGACAT...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGTCCTTCCCGTGCTCCTaGCTGCTCTCAATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEESFPCS*LLSMRR
Trigger: CCTCCTCATTGAGAGCAGCAAGGAGCACGGGAAGGA...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGGGCGCAGGAGGAGGAGACGCTGAAGAGTGCGCCCAAGGGGGCACGGCTCTTATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GGAGGGDAEECAQGGTALIGNFK*SKLVRE
Trigger: CTCCCTCACCAGTTTGGACAATTTGAAATTACCTAT...AAGAGCCGTGCCCCCTTGGGCGCACTCTTCAGCGTCTCCTCCTCCTGCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGAGGCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTCCTTCCCGTGCTCCTaGCTGCTCTCAATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GGIPNCQHSKRQWQELLLSFPCS*LLSMRR
Trigger: CCTCCTCATTGAGAGCAGCAAGGAGCACGGGAAGGA...GAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCGCTGACACCTAACACTGTCACGGGCATGCAGAGCCCCTGCCACGCCCTTCCCCACCATGTAGCTATGTaGCAAGCTTTGACAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ALTPNTVTGMQSPCHALPHHVAM*QALTSL
Trigger: AAGACTTGTCAAAGCTTGCAACATAGCTACATGGTG...GGGAAGGGCGTGGCAGGGGCTCTGCATGCCCGTGACAGTGTTAGGTGTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCCAGACCCAGTGGGCTaGTCTGAAGTTCCACTTACT +
Preference number: 5 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSPDPVG*SEVPLT
Trigger: AGTAAGTGGAACTTCAGACAAGCCCACTGGGTCTGG...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAAAGCCCATGGATCCCTaGGGGATGGGCAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GRRCSLQTPASPRFSISEKPMDP*GMGSLQ
Trigger: CTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCTT...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CAA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCATCTTGGAGAAGACCTaGCGCTTGTTGCGGTGGATG +
Preference number: 5 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIILEKT*RLLRWM
Trigger: CATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGAT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp CCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTATGACACTCCAGCCTTaGGGGATCTGGAAACCATCA +
Preference number: 5 (lower is better)
Translates to: PLLPVRRTRILPHTHAWSMTLQP*GIWKPS
Trigger: TGATGGTTTCCAGATCCCCAAAGGCTGGAGTGTCAT...ACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCCCCATACTCACGCCTGGAGTCAGGAGGCATCCCAAATaGCCAACACTCAAAACGCCA +
Preference number: 5 (lower is better)
Translates to: PCSPSEEPVSFPILTPGVRRHPK*PTLKTP
Trigger: TGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCCT...GACTCCAGGCGTGAGTATGGGGAAGGATACGGGTTCTTCTGACGGGGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTTCTGAGACTCAGGGATaGGAGAGCAGTCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPSETQG*ESSLCG
Trigger: ACCACACAGACTGCTCTCCAATCCCTGAGTCTCAGA...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTGGACGCAGCCCCCGCCCCGCCAAGGTTGACTCCTGTTCTGCTACCCAGGATGCTATGTTGCAAGCTTaGACAAGTCTTTACCCATTC +
Preference number: 5 (lower is better)
Translates to: VGRSPRPAKVDSCSATQDAMLQA*TSLYPF
Trigger: GAATGGGTAAAGACTTGTCAAAGCTTGCAACATAGC...ATCCTGGGTAGCAGAACAGGAGTCAACCTTGGCGGGGCGGGGGCTGCGTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp ACAGAAGTCTCGCCAGGACAGCTAGAACACAGGCTAGGGCATGAAGGGGAGGAGCCAGACCCAGTGGGCTaGTCTGAAGTTCCACTTACT +
Preference number: 5 (lower is better)
Translates to: TEVSPGQLEHRLGHEGEEPDPVG*SEVPLT
Trigger: AGTAAGTGGAACTTCAGACAAGCCCACTGGGTCTGG...CTCCTCCCCTTCATGCCCTAGCCTGTGTTCTAGCTGTCCTGGCGAGACTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAATCGTGGCTGAAGATCTaGGAGAAGACCTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: GRRCSLQTPASPRFSISESWLKI*EKTLRL
Trigger: CAAGCGCAAGGTCTTCTCCAAGATCTTCAGCCACGA...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp GGGAGGAGATGTTCACTCCAGACCCCAGCATCCCCAAGATTCTCTATCAGTGAAAGGATCTCGTTCTGGTaGGAGTCCAGGCCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: GRRCSLQTPASPRFSISERISFW*ESRPKN
Trigger: GTTCTTTGGCCTGGACTCCAACCAGAACGAGATCCT...TTCACTGATAGAGAATCTTGGGGATGCTGGGGTCTGGAGTGAACATCTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTAGGAGGCATCCCAAATaGCCAACACTCAAAACGCCA +
Preference number: 5 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPRRHPK*PTLKTP
Trigger: TGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCCT...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCATGACACTCCAGCCTTaGGGGATCTGGAAACCATCA +
Preference number: 5 (lower is better)
Translates to: ASQIANTQNASGRSYSSFMTLQP*GIWKPS
Trigger: TGATGGTTTCCAGATCCCCAAAGGCTGGAGTGTCAT...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTGGGCCTGGGGCTCCTTaGCCCCAAGGTCAGAGGACA +
Preference number: 5 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIGPGAP*PQGQRT
Trigger: TGTCCTCTGACCTTGGGGCAAAGGAGCCCCAGGCCC...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCAGGAGGCATCCCAAATaGCCAACACTCAAAACGCCA +
Preference number: 5 (lower is better)
Translates to: ASQIANTQNASGRSYSSFRRHPK*PTLKTP
Trigger: TGGCGTTTTGAGTGTTGGCAATTTGGGATGCCTCCT...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GAACACAGGCTAGGGCATGAAGGGGAGGAGATGTTCACTCCAGACCCCAGCATCATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EHRLGHEGEEMFTPDPSIIGNFK*SKLVRE
Trigger: CTCCCTCACCAGTTTGGACAATTTGAAATTACCTAT...GATGCTGGGGTCTGGAGTGAACATCTCCTCCCCTTCATGCCCTAGCCTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GTTAAGGAAGGGAAGACGGAGGCCCTTGCTCCCCGTCAGAAGAACCCGTATCCTATAGGTAATTTCAAATaGTCCAAACTGGTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VKEGKTEALAPRQKNPYPIGNFK*SKLVRE
Trigger: CTCCCTCACCAGTTTGGACAATTTGAAATTACCTAT...AGGATACGGGTTCTTCTGACGGGGAGCAAGGGCCTCCGTCTTCCCTTCCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTTTGGGGATGGGCAGCTaGCAGCTCTTGTCGCGAGTG +
Preference number: 5 (lower is better)
Translates to: GLSEVPLTALLDTQSKTILGMGS*QLLSRV
Trigger: CACTCGCGACAAGAGCTGCAAGCTGCCCATCCCCAA...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS-3UTR CAA 90 bp CTCTTCTCACTGCCTTTGAGACCCAGCGGGGCAAATGATCCTTCTTTCCTCCCTGCTATGTTGCAAGCTTaGACAAGTCTTTACCCATTC +
Preference number: 5 (lower is better)
Translates to: LFSLPLRPSGANDPSFLPAMLQA*TSLYPF
Trigger: GAATGGGTAAAGACTTGTCAAAGCTTGCAACATAGC...AGGGAGGAAAGAAGGATCATTTGCCCCGCTGGGTCTCAAAGGCAGTGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCGCTATGTTGCAAGCTTaGACAAGTCTTTACCCATTC +
Preference number: 5 (lower is better)
Translates to: ASQIANTQNASGRSYSSFAMLQA*TSLYPF
Trigger: GAATGGGTAAAGACTTGTCAAAGCTTGCAACATAGC...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GCATCCCAAATTGCCAACACTCAAAACGCCAGTGGCAGGAGCTACTCCTCTTTCCACCATGTAGCTATGTaGCAAGCTTTGACAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ASQIANTQNASGRSYSSFHHVAM*QALTSL
Trigger: AAGACTTGTCAAAGCTTGCAACATAGCTACATGGTG...GAAAGAGGAGTAGCTCCTGCCACTGGCGTTTTGAGTGTTGGCAATTTGGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTAACACGTTCACGTCTTaGAACACGGGCGCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: GLSEVPLTALLDTQSKTINTFTS*NTGAVS
Trigger: TGACACAGCGCCCGTGTTCAAAGACGTGAACGTGTT...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp GGCTTGTCTGAAGTTCCACTTACTGCTCTCCTAGATACTCAGTCAAAAACAATTCCAGACCCAGTGGGCTaGTCTGAAGTTCCACTTACT +
Preference number: 5 (lower is better)
Translates to: GLSEVPLTALLDTQSKTIPDPVG*SEVPLT
Trigger: AGTAAGTGGAACTTCAGACAAGCCCACTGGGTCTGG...AATTGTTTTTGACTGAGTATCTAGGAGAGCAGTAAGTGGAACTTCAGACAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS-3UTR CAA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCACCCAACAAATGCGTCTaGAACACGTTGCCATACTTC +
Preference number: 5 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISPNKCV*NTLPYF
Trigger: GAAGTATGGCAACGTGTTCAAGACGCATTTGTTGGG...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS-3UTR CAA 90 bp TACAGATTAAAACCACGACAGCAAAAACACTCACACGGTACCAGTTTCATATCACACCATGTAGCTATGTaGCAAGCTTTGACAAGTCTT +
Preference number: 5 (lower is better)
Translates to: YRLKPRQQKHSHGTSFISHHVAM*QALTSL
Trigger: AAGACTTGTCAAAGCTTGCAACATAGCTACATGGTG...TGATATGAAACTGGTACCGTGTGAGTGTTTTTGCTGTCGTGGTTTTAATCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000546307.5
CDS GCA 72 bp TTGTCGCGAGTGGCGGCCCAGCGCAGCTGCCACAGCTaGTGCGACACGGCCAGCAGCAGCGTCACGGACACC +
Preference number: 6 (lower is better)
Translates to: LSRVAAQRSCHS*CDTASSSVTDT
Trigger: GGTGTCCGTGACGCTGCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS CAA 90 bp AGCGGGAAGCCCATGGATCCCTTGGGGATGGGCAGCTTGCAGCTCTaGTCGCGAGTGGCGGCCCAGCGCAGCTGCCACAGCTGCTGCGAC +
Preference number: 6 (lower is better)
Translates to: SGKPMDPLGMGSLQL*SRVAAQRSCHSCCD
Trigger: GTCGCAGCAGCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCTTCCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS CAA 90 bp CGGCTGGTGCTAGCCAGCTCCACCGCCAGCACCTTCAGGAACAGCTaGGCCAGGTGCTTGCCCAGGCAGGTCCGGACACCGCCACCGAAC +
Preference number: 6 (lower is better)
Translates to: RLVLASSTASTFRNS*ARCLPRQVRTPPPN
Trigger: GTTCGGTGGCGGTGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGCTGTTCCTGAAGGTGCTGGCGGTGGAGCTGGCTAGCACCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS TCA 72 bp CCCTCGCAGGGGCAGCCGCCACTGTGCAGGATGCCATaGGCCCGCAGCTCATCCCGCAGCTTCTCCAGCACA +
Preference number: 6 (lower is better)
Translates to: PSQGQPPLCRMP*ARSSSRSFSST
Trigger: TGTGCTGGAGAAGCTGCGGGATGAGCTGCGGGCTCATGGCATCCTGCACAGTGGCGGCTGCCCCTGCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS GCA 72 bp TGGACACCGTGTTGGGGCCCAGCAACATGCGGGTGCTaGGAGGCCACTCGGTGCTCACGAGGTGGTGCTCGC +
Preference number: 6 (lower is better)
Translates to: WTPCWGPATCGC*EATRCSRGGAR
Trigger: GCGAGCACCACCTCGTGAGCACCGAGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS GCA 72 bp GTGTGCCCTCGCAGGGGCAGCCGCCACTGTGCAGGATaGCATGAGCCCGCAGCTCATCCCGCAGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: VCPRRGSRHCAG*HEPAAHPAASP
Trigger: TGGAGAAGCTGCGGGATGAGCTGCGGGCTCATGGCATCCTGCACAGTGGCGGCTGCCCCTGCGAGGGCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 72 bp GCAGCAGCGTCACGGACACCAGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAGATCCAAGCCCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: AAASRTPGTRRG*PAPTPDPSPQR
Trigger: TCTTTGAGGGCTTGGATCTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCCTGGTGTCCGTGACGCTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS CAA 72 bp ACCGCCAGCACCTTCAGGAACAGCTTGGCCAGGTGCTaGCCCAGGCAGGTCCGGACACCGCCACCGAACGGG +
Preference number: 6 (lower is better)
Translates to: TASTFRNSLARC*PRQVRTPPPNG
Trigger: CCCGTTCGGTGGCGGTGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGCTGTTCCTGAAGGTGCTGGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CAA 90 bp TCTCCGATGAGCGGGAAGCCCATGGATCCCTTGGGGATGGGCAGCTaGCAGCTCTTGTCGCGAGTGGCGGCCCAGCGCAGCTGCCACAGC +
Preference number: 6 (lower is better)
Translates to: SPMSGKPMDPLGMGS*QLLSRVAAQRSCHS
Trigger: GCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCTTCCCGCTCATCGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS CAA 90 bp AGCCAGTGGCCGGTCTCTCCGATGAGCGGGAAGCCCATGGATCCCTaGGGGATGGGCAGCTTGCAGCTCTTGTCGCGAGTGGCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SQWPVSPMSGKPMDP*GMGSLQLLSRVAAQ
Trigger: CTGGGCCGCCACTCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCTTCCCGCTCATCGGAGAGACCGGCCACTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS GCA 72 bp TCCACCGCCAGCACCTTCAGGAACAGCTTGGCCAGGTaGTTGCCCAGGCAGGTCCGGACACCGCCACCGAAC +
Preference number: 6 (lower is better)
Translates to: STASTFRNSLAR*LPRQVRTPPPN
Trigger: GTTCGGTGGCGGTGTCCGGACCTGCCTGGGCAAGCACCTGGCCAAGCTGTTCCTGAAGGTGCTGGCGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 72 bp GGCTGGGCTGAGGCGGGTGGGTCTTGGGTTAGACTGTaGCGCTCAGCATGGCCTCCGTCTCCGGCAGGATCT +
Preference number: 6 (lower is better)
Translates to: GWAEAGGSWVRL*RSAWPPSPAGS
Trigger: AGATCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAGTCTAACCCAAGACCCACCCGCCTCAGCCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS GCA 72 bp AGCAGCACCCGGATGGCCATGCGGAAGGTCAGCTTCTaGGCCTCCTGGTACACGTTGATGGCCTCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: SSTRMAMRKVSF*ASWYTLMASGW
Trigger: CCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCGCATGGCCATCCGGGTGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000474509.1
ENST00000546307.5
CDS CCA 72 bp TTCTGCGCCTCCTGGTACACGTTGATGGCCTCGGGGTaGCTGCTCCAGGCGCGCAGTGTGTCCTGGATCACC +
Preference number: 6 (lower is better)
Translates to: FCASWYTLMASG*LLQARSVSWIT
Trigger: GGTGATCCAGGACACACTGCGCGCCTGGAGCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000461519.1
ENST00000474509.1
ENST00000546307.5
CDS CCA 72 bp CGGATGGCCATGCGGAAGGTCAGCTTCTGCGCCTCCTaGTACACGTTGATGGCCTCGGGGTGGCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RMAMRKVSFCAS*YTLMASGWLLQ
Trigger: CTGGAGCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAAGCTGACCTTCCGCATGGCCATCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000474509.1
ENST00000546307.5
CDS GCA 72 bp AATTGGACACCGTGTTGGGGCCCAGCAACATGCGGGTaGTGCGAGGCCACTCGGTGCTCACGAGGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: NWTPCWGPATCG*CEATRCSRGGA
Trigger: AGCACCACCTCGTGAGCACCGAGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CCA 72 bp GCGGGTGGGTCTTGGGTTAGACTGTGGCGCTCAGCATaGCCTCCGTCTCCGGCAGGATCTCGTTCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: AGGSWVRLWRSA*PPSPAGSRSGW
Trigger: CCAACCAGAACGAGATCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAGTCTAACCCAAGACCCACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CAA 72 bp CCGGTCTCTCCGATGAGCGGGAAGCCCATGGATCCCTaGGGGATGGGCAGCTTGCAGCTCTTGTCGCGAGTG +
Preference number: 6 (lower is better)
Translates to: PVSPMSGKPMDP*GMGSLQLLSRV
Trigger: CACTCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGATCCATGGGCTTCCCGCTCATCGGAGAGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000474509.1
ENST00000546307.5
CDS CAA 90 bp GTGGCGCTCAGCATGGCCTCCGTCTCCGGCAGGATCTCGTTCTGGTaGGAGTCCAGGCCAAAGAACTTGACGCTGAGGCCATCCACGGGG +
Preference number: 6 (lower is better)
Translates to: VALSMASVSGRISFW*ESRPKNLTLRPSTG
Trigger: CCCCGTGGATGGCCTCAGCGTCAAGTTCTTTGGCCTGGACTCCAACCAGAACGAGATCCTGCCGGAGACGGAGGCCATGCTGAGCGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CAA 90 bp TCCGCGCCGGTCACGCGTATCAGCGGCCGCCCCAACAAATGCGTCTaGAACACGTTGCCATACTTCTCCCTCCGCGACGACTGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: SAPVTRISGRPNKCV*NTLPYFSLRDDWKP
Trigger: TGGCTTCCAGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCATTTGTTGGGGCGGCCGCTGATACGCGTGACCGGCGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CAA 90 bp TTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATTGGACACCGTGTaGGGGCCCAGCAACATGCGGGTGCTGCGAGGCCACTCGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LRLLRWMSPMELDTV*GPSNMRVLRGHSVL
Trigger: GAGCACCGAGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS GCA 72 bp CAATGGAATTGGACACCGTGTTGGGGCCCAGCAACATaGGGGTGCTGCGAGGCCACTCGGTGCTCACGAGGT +
Preference number: 6 (lower is better)
Translates to: QWNWTPCWGPAT*GCCEATRCSRG
Trigger: ACCTCGTGAGCACCGAGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS GCA 72 bp CGCAGCTCATCCCGCAGCTTCTCCAGCACAGTGGGGTaGTTCAGCAGCTGCATGATGAGTGAGGTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: RSSSRSFSSTVG*FSSCMMSEVLA
Trigger: CGCCAGCACCTCACTCATCATGCAGCTGCTGAAGCACCCCACTGTGCTGGAGAAGCTGCGGGATGAGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CCA 72 bp TGCGGTGGATGTCGCCAATGGAATTGGACACCGTGTTaGGGCCCAGCAACATGCGGGTGCTGCGAGGCCACT +
Preference number: 6 (lower is better)
Translates to: CGGCRQWNWTPC*GPATCGCCEAT
Trigger: AGTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CCA 72 bp TTGAACACGTTGCCATACTTCTCCCTCCGCGACGACTaGAAGCCAGAACCCTGCGGGAGCCACACCCGGGTC +
Preference number: 6 (lower is better)
Translates to: LNTLPYFSLRDD*KPEPCGSHTRV
Trigger: GACCCGGGTGTGGCTCCCGCAGGGTTCTGGCTTCCAGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461519.1
CDS CAA 72 bp TTGCGGTGGATGTCGCCAATGGAATTGGACACCGTGTaGGGGCCCAGCAACATGCGGGTGCTGCGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: LRWMSPMELDTV*GPSNMRVLRGH
Trigger: GTGGCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CCA 72 bp TTGAACACGTTGCCATACTTCTCCCTCCGCGACGACTaGAAGCCAGAACCCTGCAGCAGCCAGTGGCCGGTC +
Preference number: 6 (lower is better)
Translates to: LNTLPYFSLRDD*KPEPCSSQWPV
Trigger: GACCGGCCACTGGCTGCTGCAGGGTTCTGGCTTCCAGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000001146.7
CDS CCA 72 bp CCTTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATTaGACACCGTGTTGGGGCCCAGCAACATGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: PCACCGGCRQWN*TPCWGPATCGC
Trigger: GCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CAA 90 bp TTGGAGAAGACCTTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATaGGACACCGTGTTGGGGCCCAGCAACATGCGGGTGCTGCGAGGC +
Preference number: 6 (lower is better)
Translates to: LEKTLRLLRWMSPME*DTVLGPSNMRVLRG
Trigger: GCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CCA 72 bp CTCAGCATGGCCTCCGTCTCCGGCAGGATCTCGTTCTaGTTGGAGTCCAGGCCAAAGAACTTGACGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LSMASVSGRISF*LESRPKNLTLR
Trigger: CCTCAGCGTCAAGTTCTTTGGCCTGGACTCCAACCAGAACGAGATCCTGCCGGAGACGGAGGCCATGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CAA 72 bp GTCACGCGTATCAGCGGCCGCCCCAACAAATGCGTCTaGAACACGTTGCCATACTTCTCCCTCCGCGACGAC +
Preference number: 6 (lower is better)
Translates to: VTRISGRPNKCV*NTLPYFSLRDD
Trigger: GTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCATTTGTTGGGGCGGCCGCTGATACGCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CAA 72 bp ACCTTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATaGGACACCGTGTTGGGGCCCAGCAACATGCGGGTG +
Preference number: 6 (lower is better)
Translates to: TLRLLRWMSPME*DTVLGPSNMRV
Trigger: CACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CAA 72 bp TGGCTGAAGCGATCGGGGTCGAACACGTTCACGTCTTaGAACACGGGCGCTGTGTCATGGGTGTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: WLKRSGSNTFTS*NTGAVSWVSRM
Trigger: CATCCGGGACACCCATGACACAGCGCCCGTGTTCAAAGACGTGAACGTGTTCGACCCCGATCGCTTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CAA 72 bp AGCATGGCCTCCGTCTCCGGCAGGATCTCGTTCTGGTaGGAGTCCAGGCCAAAGAACTTGACGCTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: SMASVSGRISFW*ESRPKNLTLRP
Trigger: TGGCCTCAGCGTCAAGTTCTTTGGCCTGGACTCCAACCAGAACGAGATCCTGCCGGAGACGGAGGCCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS TCA 72 bp TCACGCGTATCAGCGGCCGCCCCAACAAATGCGTCTTaGACACGTTGCCATACTTCTCCCTCCGCGACGACT +
Preference number: 6 (lower is better)
Translates to: SRVSAAAPTNAS*TRCHTSPSATT
Trigger: AGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCATTTGTTGGGGCGGCCGCTGATACGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS TCA 72 bp TGGTCATCTCCTTCCCGTGCTCCTTGCTGCTCTCAATaGGGAGGTCCAGGGCGTCCAAGTAGTCCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: WSSPSRAPCCSQ*GGPGRPSSPCP
Trigger: AGGGCAAGGACTACTTGGACGCCCTGGACCTCCTCATTGAGAGCAGCAAGGAGCACGGGAAGGAGATGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS CAA 72 bp ATCAGCGGCCGCCCCAACAAATGCGTCTTGAACACGTaGCCATACTTCTCCCTCCGCGACGACTGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ISGRPNKCVLNT*PYFSLRDDWKP
Trigger: TGGCTTCCAGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCATTTGTTGGGGCGGCCGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS CAA 72 bp TTCAGCTCCTGCATGGTCATCTCCTTCCCGTGCTCCTaGCTGCTCTCAATGAGGAGGTCCAGGGCGTCCAAG +
Preference number: 6 (lower is better)
Translates to: FSSCMVISFPCS*LLSMRRSRASK
Trigger: CTTGGACGCCCTGGACCTCCTCATTGAGAGCAGCAAGGAGCACGGGAAGGAGATGACCATGCAGGAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000001146.7
ENST00000412253.1
ENST00000546307.5
CDS TCA 72 bp GGATCTTGGGCAGGTAACTCTCCAGGGCCTCGTGGCTaGAGATCTTGGAGAAGACCTTGCGCTTGTTGCGGT +
Preference number: 6 (lower is better)
Translates to: GSWAGNSPGPRG*RSWRRPCACCG
Trigger: ACCGCAACAAGCGCAAGGTCTTCTCCAAGATCTTCAGCCACGAGGCCCTGGAGAGTTACCTGCCCAAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1
CDS TCA 72 bp GGATCTTGGGCAGGTAACTCTCCAGGGCCTCGTGGCTaGAGATCTTGGAGAAGACCTTCGCCAAGACCACAG +
Preference number: 6 (lower is better)
Translates to: GSWAGNSPGPRG*RSWRRPSPRPQ
Trigger: CTGTGGTCTTGGCGAAGGTCTTCTCCAAGATCTTCAGCCACGAGGCCCTGGAGAGTTACCTGCCCAAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412253.1
CDS CCA 72 bp AGAAGACCTTGCGCTTGTTGCGGTGGATGTCGCCAATaGAATTGGACACCGTGTTGGGGCCCAGCAACATGC +
Preference number: 6 (lower is better)
Translates to: RRPCACCGGCRQ*NWTPCWGPATC
Trigger: GCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000001146.7
ENST00000461519.1