RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP26A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000095596

Ensembl transcript IDs: ENST00000224356.5, ENST00000371531.5, ENST00000622925.1, ENST00000623162.1, ENST00000624589.3, ENST00000625202.1

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATaGATCCTCTGGGTGAGGCAGCATGAATCGGTCAGGATTAAATTC +
Preference number: 1 (lower is better)
Translates to: TAPKASSKWNEAEPG*ILWVRQHESVRIKF
Trigger: GAATTTAATCCTGACCGATTCATGCTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR TCA 90 bp CCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGTaGGGCAGCATGAATCGGTCAGGATTAAATTCTTCCTTGTTGGTG +
Preference number: 1 (lower is better)
Translates to: PPPNGMKLNLDASSG*GSMNRSGLNSSLLV
Trigger: CACCAACAAGGAAGAATTTAATCCTGACCGATTCATGCTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CCA 90 bp TTTTGCAAATTCTTTGCCTACACAGCTCCTAAGGCCTCCTCCAAATaGAATGAAGCTGAACCTGGATGCATCCTCTGGGTGAGGCAGCAT +
Preference number: 1 (lower is better)
Translates to: FCKFFAYTAPKASSK*NEAEPGCILWVRQH
Trigger: ATGCTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGTAGGCAAAGAATTTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CCA 90 bp AAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTaGGTGAGGCAGCATGAATCGGTCAGGATTAAATTCTTCCTTGTT +
Preference number: 1 (lower is better)
Translates to: KASSKWNEAEPGCIL*VRQHESVRIKFFLV
Trigger: AACAAGGAAGAATTTAATCCTGACCGATTCATGCTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CCA 90 bp GTCTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATaGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGGGA +
Preference number: 1 (lower is better)
Translates to: VSGLNIQAHQISPWK*VNLAGRLSTGYTVG
Trigger: TCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR GCA 90 bp TACACGGTGGGACTGGTTTTCATTGTAGGAGGTCCATTTAGAAGCTaGCAGTCACAATGCCTGGCCAGCTCCACTGTAAATATTTTGAGA +
Preference number: 1 (lower is better)
Translates to: YTVGLVFIVGGPFRS*QSQCLASSTVNILR
Trigger: TCTCAAAATATTTACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAAAACCAGTCCCACCGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR GCA 90 bp GAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTaGAGGGAGATTGTCCACAGGATACACGGTGGGACTGGTTTTCAT +
Preference number: 1 (lower is better)
Translates to: EHSSSSDFPMEMGES*REIVHRIHGGTGFH
Trigger: ATGAAAACCAGTCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR GCA 90 bp CATGAATCGGTCAGGATTAAATTCTTCCTTGTTGGTGAAGATCTCTaGCACATCATGAGTATCACAGATACTGTAGATAACATTCCAGCC +
Preference number: 1 (lower is better)
Translates to: HESVRIKFFLVGEDL*HIMSITDTVDNIPA
Trigger: GGCTGGAATGTTATCTACAGTATCTGTGATACTCATGATGTGGCAGAGATCTTCACCAACAAGGAAGAATTTAATCCTGACCGATTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR GCA 90 bp GTAGGAGGTCCATTTAGAAGCTGCCAGTCACAATGCCTGGCCAGCTCCACTGTAGAAGCTGAACCTGGATaGATCCTCTGGGTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: VGGPFRSCQSQCLASSTVEAEPG*ILWVRQ
Trigger: CTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTC...TACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR CCA 90 bp CTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGAAACCCTCCTGGAACTaGGGGATTCAGTCGAAGGGT +
Preference number: 2 (lower is better)
Translates to: LLRPPPNGMKLNLDASSGKPSWN*GIQSKG
Trigger: ACCCTTCGACTGAATCCCCCAGTTCCAGGAGGGTTT...CCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR CCA 90 bp TTCATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAATGCCTGGCCAGCTCCAACCCGAAACCCTCCTaGAACTGGGGGATTCAGTCG +
Preference number: 2 (lower is better)
Translates to: FIVGGPFRSCQSQCLASSNPKPS*NWGIQS
Trigger: CGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTT...GGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CAA 90 bp GCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGAGATaGTCCACAGGATACACGGTGGGACTGGTTTTCATTGTAGGAGGT +
Preference number: 2 (lower is better)
Translates to: AHQISPWKWVNLAGR*STGYTVGLVFIVGG
Trigger: ACCTCCTACAATGAAAACCAGTCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR TCA 90 bp CTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTGATGCATCCTCTGGGTaGGGCAGCATGAATCGGTCA +
Preference number: 2 (lower is better)
Translates to: LRFEHSSSSDFPMEMGESDASSG*GSMNRS
Trigger: TGACCGATTCATGCTGCCTCACCCAGAGGATGCATC...AGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR CCA 90 bp ACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCCAGCCCTTGGGAATCTaGTATCCATTTAATTCAAAA +
Preference number: 2 (lower is better)
Translates to: TQLLRPPPNGMKLNLDASQPLGI*YPFNSK
Trigger: TTTTGAATTAAATGGATACCAGATTCCCAAGGGCTG...GGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR GCA 90 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGGTTGGTGAAGATCTCTaGCACATCATGAGTATCACA +
Preference number: 2 (lower is better)
Translates to: LNIQAHQISPWKWVNLAGVGEDL*HIMSIT
Trigger: TGTGATACTCATGATGTGGCAGAGATCTTCACCAAC...CCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR TCA 90 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGTCCAACTTGTTGTCTTaGTTGCTCTTGCAAAGTAAA +
Preference number: 2 (lower is better)
Translates to: LNIQAHQISPWKWVNLAGSNLLS*LLLQSK
Trigger: TTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGA...CCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR TCA 90 bp CCAATAAGTCTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGATTCTTCCTTGTTGGTaGAGATCTCTGCCACATCAT +
Preference number: 2 (lower is better)
Translates to: PISLRFEHSSSSDFPMEMILPCW*RSLPHH
Trigger: ATGATGTGGCAGAGATCTTCACCAACAAGGAAGAAT...CATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAGACTTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAAACAGATGCAAAGATaGCAAATAAGTCCAGGTAGG +
Preference number: 2 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDKQMQR*QISPGR
Trigger: CCTACCTGGACTTATTTGTCATCTTTGCATCTGTTT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
3UTR-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAAACAGATGCAAAGATaGCAAATAAGTCCAGGTAGG +
Preference number: 2 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHKQMQR*QISPGR
Trigger: CCTACCTGGACTTATTTGTCATCTTTGCATCTGTTT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
3UTR GCA 72 bp AAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATaGATCCTCTGGGTGAGGCAGCATGAATCGGTCAGG +
Preference number: 3 (lower is better)
Translates to: KASSKWNEAEPG*ILWVRQHESVR
Trigger: CCTGACCGATTCATGCTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CCA 72 bp TTCTTTGCCTACACAGCTCCTAAGGCCTCCTCCAAATaGAATGAAGCTGAACCTGGATGCATCCTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: FFAYTAPKASSK*NEAEPGCILWV
Trigger: CACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGTAGGCAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR GCA 72 bp AGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTaGAGGGAGATTGTCCACAGGATACACGGTGGGACT +
Preference number: 3 (lower is better)
Translates to: SSSDFPMEMGES*REIVHRIHGGT
Trigger: AGTCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR GCA 72 bp GGACTGGTTTTCATTGTAGGAGGTCCATTTAGAAGCTaGCAGTCACAATGCCTGGCCAGCTCCACTGTAAAT +
Preference number: 3 (lower is better)
Translates to: GLVFIVGGPFRS*QSQCLASSTVN
Trigger: ATTTACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAAAACCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR TCA 72 bp AATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGTaGGGCAGCATGAATCGGTCAGGATTAAATTCTTCC +
Preference number: 3 (lower is better)
Translates to: NGMKLNLDASSG*GSMNRSGLNSS
Trigger: GGAAGAATTTAATCCTGACCGATTCATGCTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR TCA 72 bp ACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTaGATCTTGCAGGGAGATTGTCCACAGGATACACGG +
Preference number: 3 (lower is better)
Translates to: TFKLIRFPHGNG*ILQGDCPQDTR
Trigger: CCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CCA 72 bp TCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTaGGTGAGGCAGCATGAATCGGTCAGGATTAAATTC +
Preference number: 3 (lower is better)
Translates to: SKWNEAEPGCIL*VRQHESVRIKF
Trigger: GAATTTAATCCTGACCGATTCATGCTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR GCA 72 bp ATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAATaGCTGGCCAGCTCCACTGTAAATATTTTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: IVGGPFRSCQSQ*LASSTVNILRR
Trigger: TCTTCTCAAAATATTTACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CCA 72 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATaGGTGAATCTTGCAGGGAGATTGTCCACAGGATAC +
Preference number: 3 (lower is better)
Translates to: LNIQAHQISPWK*VNLAGRLSTGY
Trigger: GTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR CCA 72 bp TCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATaGAAATGGGTGAATCTTGCAGGGAGATTGTCCACA +
Preference number: 3 (lower is better)
Translates to: SGLNIQAHQISP*KWVNLAGRLST
Trigger: TGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR CAA 90 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGCCCGATGTATTTAAGTaGTTCCAAAATTTCCATGTC +
Preference number: 3 (lower is better)
Translates to: LNIQAHQISPWKWVNLAGPDVFK*FQNFHV
Trigger: GACATGGAAATTTTGGAACAACTTAAATACATCGGG...CCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR-3UTR CAA 90 bp CCAATAAGTCTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGTTAAATTCTTCCTTGTaGGTGAAGATCTCTGCCACA +
Preference number: 3 (lower is better)
Translates to: PISLRFEHSSSSDFPMEMLNSSL*VKISAT
Trigger: TGTGGCAGAGATCTTCACCAACAAGGAAGAATTTAA...CATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAGACTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR TCA 72 bp GTTTATGACATGTTAGATAAGCTGGAGAGGTTAGAGTaGCAGTTCTCAGTGTTACCTTTTCAGGTTCATCTT +
Preference number: 3 (lower is better)
Translates to: VYDMLDKLERLE*QFSVLPFQVHL
Trigger: AAGATGAACCTGAAAAGGTAACACTGAGAACTGTCACTCTAACCTCTCCAGCTTATCTAACATGTCATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
3UTR GCA 72 bp GTCAGGATTAAATTCTTCCTTGTTGGTGAAGATCTCTaGCACATCATGAGTATCACAGATACTGTAGATAAC +
Preference number: 3 (lower is better)
Translates to: VRIKFFLVGEDL*HIMSITDTVDN
Trigger: GTTATCTACAGTATCTGTGATACTCATGATGTGGCAGAGATCTTCACCAACAAGGAAGAATTTAATCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
3UTR TCA 72 bp AAAACTCATATGTACACTTCCAATAAGTCTCAGGTTTaGACATTCAAGCTCATCAGATTTCCCCATGGAAAT +
Preference number: 3 (lower is better)
Translates to: KTHMYTSNKSQV*TFKLIRFPHGN
Trigger: ATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAGACTTATTGGAAGTGTACATATGAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGGCTGCAGCGCGTCTTTaGAGCCCTGGCCCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LLRPPPNGMKLNLDASSGAAARL*SPGPPR
Trigger: CCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGC...CCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp GTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCAGTCGAAGGGTCTGCTCGATGCGCGCGTaGATGAGGTTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VFRATRNPPGTGGFSRRVCSMRA*MRFRAF
Trigger: GAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCA...GACCCTTCGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCAGTCGAAGGGTCGCTCTCCGAGCAAGATaGGCCGCACATTGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: VFRATRNPPGTGGFSRRVALRAR*AAHCPR
Trigger: GCGCGGACAATGTGCGGCGCATCTTGCTCGGAGAGC...GACCCTTCGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GTAGGAGGTCCATTTAGAAGCTGCCAGTCACAATGCCTGGCCAGCTCCACTGTAGCCTCCACAAGCTGCTaGTCGGAGTCCCCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: VGGPFRSCQSQCLASSTVASTSC*SESPSP
Trigger: GGGCGACGGGGACTCCGAGCAGCAGCTTGTGGAGGC...TACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp ACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCGCGTCTTTGCAGCCCTaGCCCGCCTCGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: TQLLRPPPNGMKLNLDASASLQP*PASDAR
Trigger: GCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGC...GGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp GAAATGGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGGGACTGGTCCCGGTACAGCCCGCTaGAGGGCACGTCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: EMGESCREIVHRIHGGTGPGTAR*RARRWA
Trigger: TGCCCATCGACGTGCCCTTCAGCGGGCTGTACCGGG...ACCAGTCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp CTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGCGATGCGCGCGTGAATaGGGTTCCGCGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: LLRPPPNGMKLNLDASSGRCARE*GSAPSC
Trigger: GCATGAAGGCGCGGAACCTCATTCACGCGCGCATCG...CCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTCCGCAGCTCAGCCACTaGTCCAGGCTGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: QLLRPPPNGMKLNLDASSPQLSH*SRLLPT
Trigger: AGTGGGCAGCAGCCTGGAGCAGTGGCTGAGCTGCGG...AGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp ACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCAAGGCCTCCACAAGCTaGTGCTCGGAGTCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: TQLLRPPPNGMKLNLDASKASTS*CSESPS
Trigger: CGACGGGGACTCCGAGCAGCAGCTTGTGGAGGCCTT...GGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp ACGGTGGGACTGGTTTTCATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAAACCGACGCTGGCCAGTaGACCGACACCAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TVGLVFIVGGPFRSCQSQTDAGQ*TDTSRC
Trigger: GCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGT...TTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAAAACCAGTCCCACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp ACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCCAGATCCCAGAATGGTaGGCACCGACGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TQLLRPPPNGMKLNLDASQIPEW*APTLAS
Trigger: ACTGGCCAGCGTCGGTGCGCACCATTCTGGGATCTG...GGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp AAAAGTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCAGTCGAAGTGCCTCGCGGCTTCTTaGGCTGCTTGTGCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KSLQSNPKPSWNWGIQSKCLAAS*AACARS
Trigger: ACTCCTCGCACAAGCAGCGCAAGAAGCCGCGAGGCA...CTTCGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGACTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp ACGGTGGGACTGGTTTTCATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAACCATCACCCGTACGGTaGGCCGCCCGAACAGATGCG +
Preference number: 4 (lower is better)
Translates to: TVGLVFIVGGPFRSCQSQPSPVR*AARTDA
Trigger: CGCATCTGTTCGGGCGGCCCACCGTACGGGTGATGG...TTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAAAACCAGTCCCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGGGACTGGTTTTCATTGTACCGACACCAGCCGGTaGTCTCCGAGCAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: ESCREIVHRIHGGTGFHCTDTSR*SPSKMR
Trigger: GCGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGT...ACAATGAAAACCAGTCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp TCCCCATGGAAATGGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGTGCTCGATCAACAGCTaGAGCGCGTCTTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SPWKWVNLAGRLSTGYTVCSINS*SASLQP
Trigger: GGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCA...CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTCACGTAGCATTCGAGTaGCTCGCGGCTTCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QLLRPPPNGMKLNLDASSHVAFE*LAASCA
Trigger: AGCGCAAGAAGCCGCGAGGCACTCGAATGCTACGTG...AGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp AAAAGTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCAGTCGAAGGAGATGTGGCTGCACTaGCCGTGGTTTCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KSLQSNPKPSWNWGIQSKEMWLH*PWFRVL
Trigger: GAGGACACGAAACCACGGCCAGTGCAGCCACATCTC...CTTCGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp GAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGGGACTGGTTTTCATTGTTGGCGATTCGGAACATaGGGCGCTTCACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ESCREIVHRIHGGTGFHCWRFGT*GASPRG
Trigger: ACCCCGAGGTGAAGCGCCTCATGTTCCGAATCGCCA...ACAATGAAAACCAGTCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp CAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGATGCATCCTCTGGGTaGGGCAGCATGAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: QLLRPPPNGMKLNLDASSDASSG*GSMNRS
Trigger: TGACCGATTCATGCTGCCTCACCCAGAGGATGCATC...AGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGATCAGAGATGTGGCTaGACTGGCCGTGGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: QLLRPPPNGMKLNLDASSDQRCG*TGRGFV
Trigger: CACGAAACCACGGCCAGTGCAGCCACATCTCTGATC...AGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCCCGGTCCCACCCGCTaGCCCGGCCCAAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHPGPTR*PGPKQP
Trigger: AGGCTGCTTTGGGCCGGGGCAGCGGGTGGGACCGGG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR GCA 90 bp TTTAATTCAAAAGTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCCGCGGCTTCTTGCGCTaGTTGTGCGAGGAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: FNSKVFRATRNPPGTGGFRGFLR*LCEESC
Trigger: GCACGACTCCTCGCACAAGCAGCGCAAGAAGCCGCG...GAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGACTTTTGAATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp TTTTGCAAATTCTTTGCCTACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAACCGTCGCCCGCCAGTTaGGGTTCGCAGCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: FCKFFAYTAPKASSKWNEPSPAS*GSQPSR
Trigger: CCTACTGGGCTGCGAACCCCAACTGGCGGGCGACGG...TTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGTAGGCAAAGAATTTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp GTAGGAGGTCCATTTAGAAGCTGCCAGTCACAATGCCTGGCCAGCTCCACTGTACCCCATGGAAATGGGTaGATCTTGCAGGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: VGGPFRSCQSQCLASSTVPHGNG*ILQGDC
Trigger: ACAATCTCCCTGCAAGATTCACCCATTTCCATGGGG...TACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGCTGCAGCGCGTCTTTaGAGCCCTGGCCCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDAAARL*SPGPPR
Trigger: CCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp TCCCCATGGAAATGGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGGGTCCATTTAGAAGCTaGCAGTCACAATGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPWKWVNLAGRLSTGYTVGPFRS*QSQCLA
Trigger: GGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACC...CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGCGTCTTTGCAGCCCTaGCCCGCCTCGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDASLQP*PASDAR
Trigger: GCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTCCGAGCGCGCCTCCTaGGGTGCGGGGCTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDSERAS*GAGLGA
Trigger: AGCTCCTAGCCCCGCACCCCAGGAGGCGCGCTCGGA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCCCGGTACAGCCCGCTaGAGGGCACGTCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHPGTAR*RARRWA
Trigger: TGCCCATCGACGTGCCCTTCAGCGGGCTGTACCGGG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCCATCCAAGGTGTGCTaGGCTCCGAGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDPSKVC*APRRRW
Trigger: CCACCGCCGCCTCGGAGCTCAGCACACCTTGGATGG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACATGGGAGGGCACAACTaGGGTCGCGGCCGCTCACGC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHMGGHN*GRGRSR
Trigger: GCGTGAGCGGCCGCGACCGCAGTTGTGCCCTCCCAT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224356.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGCCTCCACAAGCTGCTaGTCGGAGTCCCCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDASTSC*SESPSP
Trigger: GGGCGACGGGGACTCCGAGCAGCAGCTTGTGGAGGC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGCCTCCACAAGCTGCTaGTCGGAGTCCCCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHASTSC*SESPSP
Trigger: GGGCGACGGGGACTCCGAGCAGCAGCTTGTGGAGGC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCTGGCCCGCCTCGGATaGCCGCAGCCCGCAGATCTT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDLARLG*PQPADL
Trigger: AAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCTGGCCCGCCTCGGATaGCCGCAGCCCGCAGATCTT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHLARLG*PQPADL
Trigger: AAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTGCGGGGCTAGGAGCTaGCCGCCTCCCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHCGARS*PPPPSK
Trigger: CTTGGATGGGGGAGGCGGGCAGCTCCTAGCCCCGCA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACCGACGCTGGCCAGTaGACCGACACCAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHTDAGQ*TDTSRC
Trigger: GCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGGTGCGCACCGACGCTaGCCAGTGGACCGACACCAG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDGAHRR*PVDRHQ
Trigger: CTGGTGTCGGTCCACTGGCCAGCGTCGGTGCGCACC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCCGTCGCCCGCCAGTTaGGGTTCGCAGCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDPSPAS*GSQPSR
Trigger: CCTACTGGGCTGCGAACCCCAACTGGCGGGCGACGG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp ACGGTGGGACTGGTTTTCATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAACCTGGATGCATCCTCTaGGTGAGGCAGCATGAATCG +
Preference number: 4 (lower is better)
Translates to: TVGLVFIVGGPFRSCQSQPGCIL*VRQHES
Trigger: CGATTCATGCTGCCTCACCCAGAGGATGCATCCAGG...TTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAAAACCAGTCCCACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCCGCAGCTCAGCCACTaGTCCAGGCTGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDPQLSH*SRLLPT
Trigger: AGTGGGCAGCAGCCTGGAGCAGTGGCTGAGCTGCGG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCCGCAGCTCAGCCACTaGTCCAGGCTGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHPQLSH*SRLLPT
Trigger: AGTGGGCAGCAGCCTGGAGCAGTGGCTGAGCTGCGG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCCATCACCCGTACGGTaGGCCGCCCGAACAGATGCG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDPSPVR*AARTDA
Trigger: CGCATCTGTTCGGGCGGCCCACCGTACGGGTGATGG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGGCAGCCCGCAGATCTTaGCGCGAATGTTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LNIQAHQISPWKWVNLAGAARRS*RECSAR
Trigger: TCGAGCAGAACATTCGCGCCAAGATCTGCGGGCTGC...CCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp ACGGTGGGACTGGTTTTCATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAAAAACCCTCCTGGAACTaGGGGATTCAGTCGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TVGLVFIVGGPFRSCQSQKPSWN*GIQSKG
Trigger: ACCCTTCGACTGAATCCCCCAGTTCCAGGAGGGTTT...TTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAAAACCAGTCCCACCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGATTTCCCCATGGAAATaGGTGAATCTTGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLRPPPNGMKLNLDASSGISPWK*VNLAGR
Trigger: TCTCCCTGCAAGATTCACCCATTTCCATGGGGAAAT...CCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTCCCGGCGGTCTCTTTaGAATCCCTCCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHSRRSL*NPSRPV
Trigger: GACCGGGCGGGAGGGATTCCAAAGAGACCGCCGGGA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCGATGCGCGCGTGAATaGGGTTCCGCGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHRCARE*GSAPSC
Trigger: GCATGAAGGCGCGGAACCTCATTCACGCGCGCATCG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTGCTCGATGCGCGCGTaGATGAGGTTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHCSMRA*MRFRAF
Trigger: GAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTGCTCGATGCGCGCGTaGATGAGGTTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDCSMRA*MRFRAF
Trigger: GAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGCTCTCCGAGCAAGATaGGCCGCACATTGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDALRAR*AAHCPR
Trigger: GCGCGGACAATGTGCGGCGCATCTTGCTCGGAGAGC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACACCGACACCAGCCGGTaGTCTCCGAGCAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDTDTSR*SPSKMR
Trigger: GCGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGTTGTGCGAGGAGTCGTaGAGGTTAGAGAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LNIQAHQISPWKWVNLAGLCEES*RLERQP
Trigger: TGGCTGCCTCTCTAACCTGCACGACTCCTCGCACAA...CCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCACGTAGCATTCGAGTaGCTCGCGGCTGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHHVAFE*LAAEGP
Trigger: CGGGCCTTCAGCCGCGAGGCACTCGAATGCTACGTG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCACGTAGCATTCGAGTaGCTCGCGGCTGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDHVAFE*LAAEGP
Trigger: CGGGCCTTCAGCCGCGAGGCACTCGAATGCTACGTG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAAGGCCTCCACAAGCTaGTGCTCGGAGTCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHKASTS*CSESPS
Trigger: CGACGGGGACTCCGAGCAGCAGCTTGTGGAGGCCTT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAAGGCCTCCACAAGCTaGTGCTCGGAGTCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDKASTS*CSESPS
Trigger: CGACGGGGACTCCGAGCAGCAGCTTGTGGAGGCCTT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp AAGGGTCTCCTTAATAACACACCCGATGTATTTAAGTTGTTCCAAAATTTCCATCTGGCCCGCCTCGGATaGCCGCAGCCCGCAGATCTT +
Preference number: 4 (lower is better)
Translates to: KGLLNNTPDVFKLFQNFHLARLG*PQPADL
Trigger: AAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAG...ATGGAAATTTTGGAACAACTTAAATACATCGGGTGTGTTATTAAGGAGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp TTCTTCCTTGTTGGTGAAGATCTCTGCCACATCATGAGTATCACAGATACTGTACCCCTCTCCCACGAGTaGTCGATCAACAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FFLVGEDLCHIMSITDTVPLSHE*SINSCS
Trigger: GCTGCAGCTGTTGATCGAGCACTCGTGGGAGAGGGG...TACAGTATCTGTGATACTCATGATGTGGCAGAGATCTTCACCAACAAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp TTCATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAATGCCTGGCCAGCTCCAGTTCGGTTGAAGATTaGTTTAGTGCCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: FIVGGPFRSCQSQCLASSSSVED*FSACMS
Trigger: GGACATGCAGGCACTAAAGCAATCTTCAACCGAACT...GGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCAGTCGAAGGGTCACTTGTTGTCTTGATTaGTCTTGCAAAGTAAACCCT +
Preference number: 4 (lower is better)
Translates to: VFRATRNPPGTGGFSRRVTCCLD*SCKVNP
Trigger: AGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGT...GACCCTTCGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAGCCAGATCCCAGAATaGTGCGCACCGACGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDSQIPE*CAPTLA
Trigger: GGCCAGCGTCGGTGCGCACCATTCTGGGATCTGGCT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGAACCCGAAACCCTCCTaGAACTGGGGGATTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LNIQAHQISPWKWVNLAGNPKPS*NWGIQS
Trigger: CGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTT...CCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp TTTAATTCAAAAGTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCGATGCGTCTTGTAGATaGAGCCGTATTTCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: FNSKVFRATRNPPGTGGFDASCR*SRISCA
Trigger: AGCGCAGGAAATACGGCTTCATCTACAAGACGCATC...GAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGACTTTTGAATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTGGCGATTCGGAACATaGGGCGCTTCACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDWRFGT*GASPRG
Trigger: ACCCCGAGGTGAAGCGCCTCATGTTCCGAATCGCCA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCAGATCCCAGAATGGTaGGCACCGACGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHQIPEW*APTLAS
Trigger: ACTGGCCAGCGTCGGTGCGCACCATTCTGGGATCTG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp TTCTTCCTTGTTGGTGAAGATCTCTGCCACATCATGAGTATCACAGATACTGTACGCAGCCCAGTAGGATaGGCATGGCGATTCGGAACA +
Preference number: 4 (lower is better)
Translates to: FFLVGEDLCHIMSITDTVRSPVG*AWRFGT
Trigger: TGTTCCGAATCGCCATGCGCATCCTACTGGGCTGCG...TACAGTATCTGTGATACTCATGATGTGGCAGAGATCTTCACCAACAAGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCCCCTCTCCCACGAGTaGTCGATCAACAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDPLSHE*SINSCS
Trigger: GCTGCAGCTGTTGATCGAGCACTCGTGGGAGAGGGG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTAGCTGCCAGTCACAATaGCTGGCCAGCTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: LRFEHSSSSDFPMEMGESSCQSQ*LASSTV
Trigger: TACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCT...AGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTGCCCACTTCCTCGGTaGTCACCGGCACGTAGCATT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDCPLPR*SPARSI
Trigger: AATGCTACGTGCCGGTGATCACCGAGGAAGTGGGCA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTGCCCACTTCCTCGGTaGTCACCGGCACGTAGCATT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHCPLPR*SPARSI
Trigger: AATGCTACGTGCCGGTGATCACCGAGGAAGTGGGCA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTTCTTGCGCTGCTTGTaGGAGGAGTCGTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LRFEHSSSSDFPMEMGESFLRCL*EESCRL
Trigger: TAACCTGCACGACTCCTCGCACAAGCAGCGCAAGAA...AGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCGCAGCCCAGTAGGATaGGCATGGCGATTCGGAACA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHRSPVG*AWRFGT
Trigger: TGTTCCGAATCGCCATGCGCATCCTACTGGGCTGCG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCGCAGCCCAGTAGGATaGGCATGGCGATTCGGAACA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDRSPVG*AWRFGT
Trigger: TGTTCCGAATCGCCATGCGCATCCTACTGGGCTGCG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTGCTCGATCAACAGCTaGAGCGCGTCTTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDCSINS*SASLQP
Trigger: GGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTGCTCGATCAACAGCTaGAGCGCGTCTTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHCSINS*SASLQP
Trigger: GGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTCCTTAATAACACACCCGATGTATTTAAGTTGTTCCAAAATTTCCATGTCCAAAGCCAGATCCCAGAATaGTGCGCACCGACGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLNNTPDVFKLFQNFHVQSQIPE*CAPTLA
Trigger: GGCCAGCGTCGGTGCGCACCATTCTGGGATCTGGCT...TTGGACATGGAAATTTTGGAACAACTTAAATACATCGGGTGTGTTATTAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGCAGCCCGCAGATCTTaGCGCGAATGTTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDAARRS*RECSAR
Trigger: TCGAGCAGAACATTCGCGCCAAGATCTGCGGGCTGC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp TTCTTCCTTGTTGGTGAAGATCTCTGCCACATCATGAGTATCACAGATACTGTATGGCTGCACTGGCCGTaGTTTCGTGTCCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FFLVGEDLCHIMSITDTVWLHWP*FRVLQR
Trigger: TCTTTGGAGGACACGAAACCACGGCCAGTGCAGCCA...TACAGTATCTGTGATACTCATGATGTGGCAGAGATCTTCACCAACAAGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGAGATGTGGCTGCACTaGCCGTGGTTTCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDEMWLH*PWFRVL
Trigger: GAGGACACGAAACCACGGCCAGTGCAGCCACATCTC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTCTGCCACATCATGAGTATCACAGATACTGTAGATAACATTCCAGCCCTTGGGAAGGCCTCCTCCAAATaGAATGAAGCTGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: LCHIMSITDTVDNIPALGKASSK*NEAEPG
Trigger: TCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTT...CCCAAGGGCTGGAATGTTATCTACAGTATCTGTGATACTCATGATGTGGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTCTTTAATTGCGGATTaGGCCCCTGGCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDSLIAD*APGSSP
Trigger: GGGGGAGGAGCCAGGGGCCCAATCCGCAATTAAAGA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR TCA 90 bp TTCATTGTAGGAGGTCCATTTAGAAGCTGCCAGTCACAATGCCTGGCCAGCTCCTCCAACTTGTTGTCTTaGTTGCTCTTGCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: FIVGGPFRSCQSQCLASSSNLLS*LLLQSK
Trigger: TTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGA...GGAGCTGGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGATGCATCCTCTGGGTaGGGCAGCATGAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHDASSG*GSMNRS
Trigger: TGACCGATTCATGCTGCCTCACCCAGAGGATGCATC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTAATAAGTCTCAGGTTTaGACATTCAAGCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: QLLRPPPNGMKLNLDASSNKSQV*TFKLIR
Trigger: TCTGATGAGCTTGAATGTTCAAACCTGAGACTTATT...AGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTTCCTGCGCTTCATCTaGAGGAACTTCCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHFLRFI*RNFLRC
Trigger: GCAGCGGAGGAAGTTCCTGCAGATGAAGCGCAGGAA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224356.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTTGTGCGAGGAGTCGTaGAGGTTAGAGAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHLCEES*RLERQP
Trigger: TGGCTGCCTCTCTAACCTGCACGACTCCTCGCACAA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACATCACCTTCTTGCGCTaGTTGTGCGAGGAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHITFLR*LCEESC
Trigger: GCACGACTCCTCGCACAAGCAGCGCAAGAAGGTGAT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGATCAGAGATGTGGCTaGACTGGCCGTGGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHDQRCG*TGRGFV
Trigger: CACGAAACCACGGCCAGTGCAGCCACATCTCTGATC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp TCCCCATGGAAATGGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGTGTCTTGATTGCTCTTaGAAAGTAAACCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: SPWKWVNLAGRLSTGYTVCLDCS*KVNPYS
Trigger: AGAGTAAGGGTTTACTTTGCAAGAGCAATCAAGACA...CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGAAGCTGAACCTGGATaGATCCTCTGGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDEAEPG*ILWVRQ
Trigger: CTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGAAGCTGAACCTGGATaGATCCTCTGGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHEAEPG*ILWVRQ
Trigger: CTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAGCTGCCAGTCACAATaGCTGGCCAGCTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDSCQSQ*LASSTV
Trigger: TACAGTGGAGCTGGCCAGGCATTGTGACTGGCAGCT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTGGCTGCACTGGCCGTaGTTTCGTGTCCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHWLHWP*FRVLQR
Trigger: TCTTTGGAGGACACGAAACCACGGCCAGTGCAGCCA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTGGCTGCACTGGCCGTaGTTTCGTGTCCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDWLHWP*FRVLQR
Trigger: TCTTTGGAGGACACGAAACCACGGCCAGTGCAGCCA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAACCCGAAACCCTCCTaGAACTGGGGGATTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDNPKPS*NWGIQS
Trigger: CGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp TCCCCATGGAAATGGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGCAGCCCTTGGGAATCTaGTATCCATTTAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: SPWKWVNLAGRLSTGYTVQPLGI*YPFNSK
Trigger: TTTTGAATTAAATGGATACCAGATTCCCAAGGGCTG...CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCCTGGATGCATCCTCTaGGTGAGGCAGCATGAATCG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDPGCIL*VRQHES
Trigger: CGATTCATGCTGCCTCACCCAGAGGATGCATCCAGG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTTCTTGCGCTGCTTGTaGGAGGAGTCGTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDFLRCL*EESCRL
Trigger: TAACCTGCACGACTCCTCGCACAAGCAGCGCAAGAA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTTCTTGCGCTGCTTGTaGGAGGAGTCGTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHFLRCL*EESCRL
Trigger: TAACCTGCACGACTCCTCGCACAAGCAGCGCAAGAA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGCAGCGAGAAGAGATTaGGGGTCATTTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHAARRD*GSFPRR
Trigger: CCTTCGAGGAAATGACCCGCAATCTCTTCTCGCTGC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGGTCCATTTAGAAGCTaGCAGTCACAATGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDGPFRS*QSQCLA
Trigger: GGCCAGGCATTGTGACTGGCAGCTTCTAAATGGACC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp TTTTGCAAATTCTTTGCCTACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGAAATGGGTGAATCTTaGAGGGAGATTGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: FCKFFAYTAPKASSKWNEEMGES*REIVHR
Trigger: CCTGTGGACAATCTCCCTGCAAGATTCACCCATTTC...TTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGTAGGCAAAGAATTTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTTCCTGCGCTTCATCTaGAGGAACTTCCTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHFLRFI*RNFLRL
Trigger: CAAGCGGAGGAAGTTCCTGCAGATGAAGCGCAGGAA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAAACCCTCCTGGAACTaGGGGATTCAGTCGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHKPSWN*GIQSKG
Trigger: ACCCTTCGACTGAATCCCCCAGTTCCAGGAGGGTTT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGATGCGTCTTGTAGATaGAGCCGTATTTCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDDASCR*SRISCA
Trigger: AGCGCAGGAAATACGGCTTCATCTACAAGACGCATC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGATGCGTCTTGTAGATaGAGCCGTATTTCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHDASCR*SRISCA
Trigger: AGCGCAGGAAATACGGCTTCATCTACAAGACGCATC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCCCCATGGAAATGGGTaGATCTTGCAGGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDPHGNG*ILQGDC
Trigger: ACAATCTCCCTGCAAGATTCACCCATTTCCATGGGG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCCCCATGGAAATGGGTaGATCTTGCAGGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHPHGNG*ILQGDC
Trigger: ACAATCTCCCTGCAAGATTCACCCATTTCCATGGGG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCGCTGCAGTACCATCTaGAAGGTTTCCCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHRCSTI*KVSPKK
Trigger: CTTCTTTGGGGAAACCTTGCAGATGGTACTGCAGCG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224356.5
CDS-3UTR GCA 90 bp AAGGGTCTCCTTAATAACACACCCGATGTATTTAAGTTGTTCCAAAATTTCCATGAAGCTGAACCTGGATaGATCCTCTGGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGLLNNTPDVFKLFQNFHEAEPG*ILWVRQ
Trigger: CTGCCTCACCCAGAGGATGCATCCAGGTTCAGCTTC...ATGGAAATTTTGGAACAACTTAAATACATCGGGTGTGTTATTAAGGAGACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CCAATAAGTCTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGTTTCTGGAGAACATGTaGGTAGAGCCCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: PISLRFEHSSSSDFPMEMFLENM*VEPQVS
Trigger: ACTTACCTGGGGCTCTACCCACATGTTCTCCAGAAA...CATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAGACTTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCAAAGCAGCCTTCACTaGCTTTCCATTTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDQSSLH*LSISRC
Trigger: GCACCTGGAAATGGAAAGCCAGTGAAGGCTGCTTTG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR TCA 90 bp TTTTGCAAATTCTTTGCCTACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAATTCTTCCTTGTTGGTaGAGATCTCTGCCACATCAT +
Preference number: 4 (lower is better)
Translates to: FCKFFAYTAPKASSKWNEILPCW*RSLPHH
Trigger: ATGATGTGGCAGAGATCTTCACCAACAAGGAAGAAT...TTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGTAGGCAAAGAATTTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCTGGAGAGGTTAGAGTaGCAGTTCTCAGTGTTACCT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHLERLE*QFSVLP
Trigger: AGGTAACACTGAGAACTGTCACTCTAACCTCTCCAG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCTGGAGAGGTTAGAGTaGCAGTTCTCAGTGTTACCT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDLERLE*QFSVLP
Trigger: AGGTAACACTGAGAACTGTCACTCTAACCTCTCCAG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp AAGGGTCTCCTTAATAACACACCCGATGTATTTAAGTTGTTCCAAAATTTCCATGCAGCGAGAAGAGATTaGGGGTCATTTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: KGLLNNTPDVFKLFQNFHAARRD*GSFPRR
Trigger: CCTTCGAGGAAATGACCCGCAATCTCTTCTCGCTGC...ATGGAAATTTTGGAACAACTTAAATACATCGGGTGTGTTATTAAGGAGACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp TTTTGCAAATTCTTTGCCTACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGTTGGTGAAGATCTCTaGCACATCATGAGTATCACA +
Preference number: 4 (lower is better)
Translates to: FCKFFAYTAPKASSKWNEVGEDL*HIMSIT
Trigger: TGTGATACTCATGATGTGGCAGAGATCTTCACCAAC...TTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGTAGGCAAAGAATTTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGAAATGGGTGAATCTTaGAGGGAGATTGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDEMGES*REIVHR
Trigger: CCTGTGGACAATCTCCCTGCAAGATTCACCCATTTC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGAAATGGGTGAATCTTaGAGGGAGATTGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHEMGES*REIVHR
Trigger: CCTGTGGACAATCTCCCTGCAAGATTCACCCATTTC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAAGTTCATCTTTAATTaGGGATTGGGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHKFIFN*GLGPWL
Trigger: GAGCCAGGGGCCCAATCCGCAATTAAAGATGAACTT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTTTCTGGAGAACATGTaGGTAGAGCCCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHFLENM*VEPQVS
Trigger: ACTTACCTGGGGCTCTACCCACATGTTCTCCAGAAA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTTTCTGGAGAACATGTaGGTAGAGCCCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDFLENM*VEPQVS
Trigger: ACTTACCTGGGGCTCTACCCACATGTTCTCCAGAAA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAAGGCCTCCTCCAAATaGAATGAAGCTGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDKASSK*NEAEPG
Trigger: TCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAAGGCCTCCTCCAAATaGAATGAAGCTGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHKASSK*NEAEPG
Trigger: TCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAGTTCGGTTGAAGATTaGTTTAGTGCCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDSSVED*FSACMS
Trigger: GGACATGCAGGCACTAAAGCAATCTTCAACCGAACT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAGTTCGGTTGAAGATTaGTTTAGTGCCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHSSVED*FSACMS
Trigger: GGACATGCAGGCACTAAAGCAATCTTCAACCGAACT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACATTTCCCCATGGAAATaGGTGAATCTTGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDISPWK*VNLAGR
Trigger: TCTCCCTGCAAGATTCACCCATTTCCATGGGGAAAT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACATTTCCCCATGGAAATaGGTGAATCTTGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHISPWK*VNLAGR
Trigger: TCTCCCTGCAAGATTCACCCATTTCCATGGGGAAAT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACATTCTTCCTTGTTGGTaGAGATCTCTGCCACATCAT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHILPCW*RSLPHH
Trigger: ATGATGTGGCAGAGATCTTCACCAACAAGGAAGAAT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACATTCTTCCTTGTTGGTaGAGATCTCTGCCACATCAT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDILPCW*RSLPHH
Trigger: ATGATGTGGCAGAGATCTTCACCAACAAGGAAGAAT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGTTGGTGAAGATCTCTaGCACATCATGAGTATCACA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHVGEDL*HIMSIT
Trigger: TGTGATACTCATGATGTGGCAGAGATCTTCACCAAC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACGTTGGTGAAGATCTCTaGCACATCATGAGTATCACA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDVGEDL*HIMSIT
Trigger: TGTGATACTCATGATGTGGCAGAGATCTTCACCAAC...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCATCAGATTTCCCCATaGAAATGGGTGAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDHQISP*KWVNLA
Trigger: TGCAAGATTCACCCATTTCCATGGGGAAATCTGATG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCATCAGATTTCCCCATaGAAATGGGTGAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHHQISP*KWVNLA
Trigger: TGCAAGATTCACCCATTTCCATGGGGAAATCTGATG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTCCAACTTGTTGTCTTaGTTGCTCTTGCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHSNLLS*LLLQSK
Trigger: TTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTCCAACTTGTTGTCTTaGTTGCTCTTGCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDSNLLS*LLLQSK
Trigger: TTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAATAAGTCTCAGGTTTaGACATTCAAGCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHNKSQV*TFKLIR
Trigger: TCTGATGAGCTTGAATGTTCAAACCTGAGACTTATT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR TCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAATAAGTCTCAGGTTTaGACATTCAAGCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDNKSQV*TFKLIR
Trigger: TCTGATGAGCTTGAATGTTCAAACCTGAGACTTATT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTGTCTTGATTGCTCTTaGAAAGTAAACCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDCLDCS*KVNPYS
Trigger: AGAGTAAGGGTTTACTTTGCAAGAGCAATCAAGACA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR GCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACTTGTTGTCTTGATTaGTCTTGCAAAGTAAACCCT +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHTCCLD*SCKVNP
Trigger: AGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCAGCCCTTGGGAATCTaGTATCCATTTAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDQPLGI*YPFNSK
Trigger: TTTTGAATTAAATGGATACCAGATTCCCAAGGGCTG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCAGCCCTTGGGAATCTaGTATCCATTTAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHQPLGI*YPFNSK
Trigger: TTTTGAATTAAATGGATACCAGATTCCCAAGGGCTG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CCA 90 bp CTCCTTAATAACACACCCGATGTATTTAAGTTGTTCCAAAATTTCCATGTCCAACATCAGATTTCCCCATaGAAATGGGTGAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLNNTPDVFKLFQNFHVQHQISP*KWVNLA
Trigger: TGCAAGATTCACCCATTTCCATGGGGAAATCTGATG...TTGGACATGGAAATTTTGGAACAACTTAAATACATCGGGTGTGTTATTAAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CCA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACTTACAGAGATACGTCTaGAATAACACACACAGACAT +
Preference number: 4 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDLQRYV*NNTHRH
Trigger: ATGTCTGTGTGTGTTATTCCAGACGTATCTCTGTAA...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS GCA 90 bp GGTGAGCAGACGCCCAGGTCCCGCGCCCCTAGTCCGCAGCCCGTTTaGCGCCCTTACCCGGTACAGCCCGCTGAAGGGCACGTCGATGGG +
Preference number: 5 (lower is better)
Translates to: GEQTPRSRAPSPQPV*RPYPVQPAEGHVDG
Trigger: CCCATCGACGTGCCCTTCAGCGGGCTGTACCGGGTAAGGGCGGCAAACGGGCTGCGGACTAGGGGCGCGGGACCTGGGCGTCTGCTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622925.1
CDS GCA 90 bp ACGCTGGCCAGTGGACCGACACCAGCCGGTGCTCTCCGAGCAAGATaGGCCGCACATTGTCCGCGCCCATCACCCGTACGGTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TLASGPTPAGALRAR*AAHCPRPSPVRWAA
Trigger: GGCGGCCCACCGTACGGGTGATGGGCGCGGACAATGTGCGGCGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGTCCACTGGCCAGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 90 bp CTCCCCTCTCCCACGAGTGCTCGATCAACAGCTGCAGCGCGTCTTTaGAGCCCTGGCCCGCCTCGGATGCCCGCAGCCCGCAGATCTTGG +
Preference number: 5 (lower is better)
Translates to: LPSPTSARSTAAARL*SPGPPRMPAARRSW
Trigger: CCAAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCACTCGTGGGAGAGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS GCA 90 bp ATGTCCAGCCGCTCTCCCCTCTCCCACGAGTGCTCGATCAACAGCTaGAGCGCGTCTTTGCAGCCCTGGCCCGCCTCGGATGCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: MSSRSPLSHECSINS*SASLQPWPASDARS
Trigger: GCTGCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCACTCGTGGGAGAGGGGAGAGCGGCTGGACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS TCA 90 bp GCCCGCAGATCTTGGCGCGAATGTTCTGCTCGATGCGCGCGTGAATaGGGTTCCGCGCCTTCATGCCCTGAGCGCAGAGAGCGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: ARRSWRECSARCARE*GSAPSCPERRERAA
Trigger: CGCCGCGCGCTCTCTGCGCTCAGGGCATGAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCAGAACATTCGCGCCAAGATCTGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622925.1
CDS TCA 90 bp CGCCGCAGCTCAGCCACTGCTCCAGGCTGCTGCCCACTTCCTCGGTaGTCACCGGCACGTAGCATTCGAGTGCCTCGCGGCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: RRSSATAPGCCPLPR*SPARSIRVPRGFLR
Trigger: GCGCAAGAAGCCGCGAGGCACTCGAATGCTACGTGCCGGTGATCACCGAGGAAGTGGGCAGCAGCCTGGAGCAGTGGCTGAGCTGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS GCA 90 bp AGAATGGTGCGCACCGACGCTGGCCAGTGGACCGACACCAGCCGGTaGTCTCCGAGCAAGATGCGCCGCACATTGTCCGCGCCCATCACC +
Preference number: 5 (lower is better)
Translates to: RMVRTDAGQWTDTSR*SPSKMRRTLSAPIT
Trigger: GGTGATGGGCGCGGACAATGTGCGGCGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGTGCGCACCATTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS CCA 90 bp GAGAGGCAGCCAGATCCCAGAATGGTGCGCACCGACGCTGGCCAGTaGACCGACACCAGCCGGTGCTCTCCGAGCAAGATGCGCCGCACA +
Preference number: 5 (lower is better)
Translates to: ERQPDPRMVRTDAGQ*TDTSRCSPSKMRRT
Trigger: TGTGCGGCGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGTGCGCACCATTCTGGGATCTGGCTGCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS CCA 90 bp TCCCACGAGTGCTCGATCAACAGCTGCAGCGCGTCTTTGCAGCCCTaGCCCGCCTCGGATGCCCGCAGCCCGCAGATCTTGGCGCGAATG +
Preference number: 5 (lower is better)
Translates to: SHECSINSCSASLQP*PASDARSPQILARM
Trigger: CATTCGCGCCAAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCACTCGTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS GCA 90 bp GATCAACAGCTGCAGCGCGTCTTTGCAGCCCTGGCCCGCCTCGGATaGCCGCAGCCCGCAGATCTTGGCGCGAATGTTCTGCTCGATGCG +
Preference number: 5 (lower is better)
Translates to: DQQLQRVFAALARLG*PQPADLGANVLLDA
Trigger: CGCATCGAGCAGAACATTCGCGCCAAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS TCA 90 bp CGCAGCCCGCAGATCTTGGCGCGAATGTTCTGCTCGATGCGCGCGTaGATGAGGTTCCGCGCCTTCATGCCCCGGTACAGCCCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RSPQILARMFCSMRA*MRFRAFMPRYSPLK
Trigger: CTTCAGCGGGCTGTACCGGGGCATGAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCAGAACATTCGCGCCAAGATCTGCGGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS GCA 90 bp AGCGAGAAGAGATTGCGGGTCATTTCCTCGAAGGCCTCCACAAGCTaGTGCTCGGAGTCCCCGTCGCCCGCCAGTTGGGGTTCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SEKRLRVISSKASTS*CSESPSPASWGSQP
Trigger: GGGCTGCGAACCCCAACTGGCGGGCGACGGGGACTCCGAGCAGCAGCTTGTGGAGGCCTTCGAGGAAATGACCCGCAATCTCTTCTCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 90 bp TGCTTTAGTGCCTGCATGTCCAGCCGCTCTCCCCTCTCCCACGAGTaGTCGATCAACAGCTGCAGCGCGTCTTTGCAGCCCTGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: CFSACMSSRSPLSHE*SINSCSASLQPWPA
Trigger: GGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCACTCGTGGGAGAGGGGAGAGCGGCTGGACATGCAGGCACTAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS CCA 90 bp CAGGTTAGAGAGGCAGCCAGATCCCAGAATGGTGCGCACCGACGCTaGCCAGTGGACCGACACCAGCCGGTGCTCTCCGAGCAAGATGCG +
Preference number: 5 (lower is better)
Translates to: QVREAARSQNGAHRR*PVDRHQPVLSEQDA
Trigger: CGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGTGCGCACCATTCTGGGATCTGGCTGCCTCTCTAACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS CCA 90 bp AAGGCCTCCACAAGCTGCTGCTCGGAGTCCCCGTCGCCCGCCAGTTaGGGTTCGCAGCCCAGTAGGATGCGCATGGCGATTCGGAACATG +
Preference number: 5 (lower is better)
Translates to: KASTSCCSESPSPAS*GSQPSRMRMAIRNM
Trigger: CATGTTCCGAATCGCCATGCGCATCCTACTGGGCTGCGAACCCCAACTGGCGGGCGACGGGGACTCCGAGCAGCAGCTTGTGGAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 90 bp GAGAAGAGATTGCGGGTCATTTCCTCGAAGGCCTCCACAAGCTGCTaGTCGGAGTCCCCGTCGCCCGCCAGTTGGGGTTCGCAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: EKRLRVISSKASTSC*SESPSPASWGSQPS
Trigger: ACTGGGCTGCGAACCCCAACTGGCGGGCGACGGGGACTCCGAGCAGCAGCTTGTGGAGGCCTTCGAGGAAATGACCCGCAATCTCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 90 bp GCTGCTGCCCACTTCCTCGGTGATCACCGGCACGTAGCATTCGAGTaGCTCGCGGCTGAAGGCCCGCATAATCACCTTCTTGCGCTGCTT +
Preference number: 5 (lower is better)
Translates to: AAAHFLGDHRHVAFE*LAAEGPHNHLLALL
Trigger: AAGCAGCGCAAGAAGGTGATTATGCGGGCCTTCAGCCGCGAGGCACTCGAATGCTACGTGCCGGTGATCACCGAGGAAGTGGGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
CDS GCA 90 bp ATTCGAGTGCCTCGCGGCTTCTTGCGCTGCTTGTGCGAGGAGTCGTaGAGGTTAGAGAGGCAGCCAGATCCCAGAATGGTGCGCACCGAC +
Preference number: 5 (lower is better)
Translates to: IRVPRGFLRCLCEES*RLERQPDPRMVRTD
Trigger: GTCGGTGCGCACCATTCTGGGATCTGGCTGCCTCTCTAACCTGCACGACTCCTCGCACAAGCAGCGCAAGAAGCCGCGAGGCACTCGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS GCA 90 bp AAGGCCCGCATAATCACCTTCTTGCGCTGCTTGTGCGAGGAGTCGTaGAGGTTAGAGAGGCAGCCAGATCCCAGAATGGTGCGCACCGAC +
Preference number: 5 (lower is better)
Translates to: KARIITFLRCLCEES*RLERQPDPRMVRTD
Trigger: GTCGGTGCGCACCATTCTGGGATCTGGCTGCCTCTCTAACCTGCACGACTCCTCGCACAAGCAGCGCAAGAAGGTGATTATGCGGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
CDS-3UTR CAA 90 bp CTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGGTGCCTCGCGGCTTCTaGCGCTGCTTGTGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: LLRPPPNGMKLNLDASSGVPRGF*RCLCEE
Trigger: CTCCTCGCACAAGCAGCGCAAGAAGCCGCGAGGCAC...CCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS TCA 90 bp CCATCACCCGTACGGTGGGCCGCCCGAACAGATGCGTCTTGTAGATaGAGCCGTATTTCCTGCGCTTCATCTGCAGGAACTTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: PSPVRWAARTDASCR*SRISCASSAGTSSA
Trigger: AGCGGAGGAAGTTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTACAAGACGCATCTGTTCGGGCGGCCCACCGTACGGGTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
CDS-3UTR CAA 90 bp CTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCTCTGGGGGCTTCTTGCGCTGCTaGTGCGAGGAGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLRPPPNGMKLNLDASSGGFLRC*CEESCR
Trigger: CCTGCACGACTCCTCGCACAAGCAGCGCAAGAAGCC...CCCAGAGGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp TCCCCATGGAAATGGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGAAGATGCGCCGCACATaGTCCGCGCCCATCACCCGT +
Preference number: 5 (lower is better)
Translates to: SPWKWVNLAGRLSTGYTVKMRRT*SAPITR
Trigger: ACGGGTGATGGGCGCGGACAATGTGCGGCGCATCTT...CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTCCATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp ACACAGCTCCTAAGGCCTCCTCCAAATGGAATGAAGCTGAACCTGGATGCATCCCGCAGCCCGCAGATCTaGGCGCGAATGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: TQLLRPPPNGMKLNLDASRSPQI*ARMFCS
Trigger: CGAGCAGAACATTCGCGCCAAGATCTGCGGGCTGCG...GGATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp GTCTTCAGAGCAACCCGAAACCCTCCTGGAACTGGGGGATTCAGTCGAAGGGTCCAAAGAGGAGTTCGGTaGAAGATTGCTTTAGTGCCT +
Preference number: 5 (lower is better)
Translates to: VFRATRNPPGTGGFSRRVQRGVR*KIALVP
Trigger: AGGCACTAAAGCAATCTTCAACCGAACTCCTCTTTG...GACCCTTCGACTGAATCCCCCAGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTTCCCGGCGGTCTCTTaGGAATCCCTCCCGCCCGGT +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHFPAVS*ESLPPG
Trigger: ACCGGGCGGGAGGGATTCCAAAGAGACCGCCGGGAA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS GCA 90 bp ATGATGGGAGAGACTGGGAGGGGGAAACAGCAGCTAATGGCCATTTaGCTGCCCAAATCCACTATCTATTTACAATCCCAGGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: MMGETGRGKQQLMAI*LPKSTIYLQSQENA
Trigger: AGCATTCTCCTGGGATTGTAAATAGATAGTGGATTTGGGCAGGCAAATGGCCATTAGCTGCTGTTTCCCCCTCCCAGTCTCTCCCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625202.1
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAAGATGCGCCGCACATaGTCCGCGCCCATCACCCGT +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDKMRRT*SAPITR
Trigger: ACGGGTGATGGGCGCGGACAATGTGCGGCGCATCTT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCGCAGCCCGCAGATCTaGGCGCGAATGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDRSPQI*ARMFCS
Trigger: CGAGCAGAACATTCGCGCCAAGATCTGCGGGCTGCG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCGCAGCCCGCAGATCTaGGCGCGAATGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHRSPQI*ARMFCS
Trigger: CGAGCAGAACATTCGCGCCAAGATCTGCGGGCTGCG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACCTTCTTGCGCTGCTaGTGCGAGGAGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHTFLRC*CEESCR
Trigger: CCTGCACGACTCCTCGCACAAGCAGCGCAAGAAGGT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACATCTTTAATTGCGGATaGGGCCCCTGGCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDIFNCG*GPWLLP
Trigger: GGGGAGGAGCCAGGGGCCCAATCCGCAATTAAAGAT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS GCA 90 bp GCTTTAGTGCCTAAGAATAGAGTGAGACCCACATTCTCACAAGTCTaGCTGCGGTTTGACAGAAGGATTACTCAGAATCGAACTGAGAGT +
Preference number: 5 (lower is better)
Translates to: ALVPKNRVRPTFSQV*LRFDRRITQNRTES
Trigger: ACTCTCAGTTCGATTCTGAGTAATCCTTCTGTCAAACCGCAGGCAGACTTGTGAGAATGTGGGTCTCACTCTATTCTTAGGCACTAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623162.1
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCGCATAATCACCTTCTaGCGCTGCTTGTGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDRIITF*RCLCEE
Trigger: CTCCTCGCACAAGCAGCGCAAGAAGGTGATTATGCG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACGGCAGCGAGAAGAGATaGCGGGTCATTTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHGSEKR*RVISSK
Trigger: CTTCGAGGAAATGACCCGCAATCTCTTCTCGCTGCC...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp GAAATGGGTGAATCTTGCAGGGAGATTGTCCACAGGATACACGGTGGGACTGGTCCCGATGTATTTAAGTaGTTCCAAAATTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: EMGESCREIVHRIHGGTGPDVFK*FQNFHV
Trigger: GACATGGAAATTTTGGAACAACTTAAATACATCGGG...ACCAGTCCCACCGTGTATCCTGTGGACAATCTCCCTGCAAGATTCACCCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp CCAATAAGTCTCAGGTTTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGAATCTTGCAGGGAGATaGTCCACAGGATACACGGTG +
Preference number: 5 (lower is better)
Translates to: PISLRFEHSSSSDFPMEMNLAGR*STGYTV
Trigger: CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATT...CATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAAACCTGAGACTTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp TTGAACATTCAAGCTCATCAGATTTCCCCATGGAAATGGGTGAATCTTGCAGGGATAACATTCCAGCCCTaGGGAATCTGGTATCCATTT +
Preference number: 5 (lower is better)
Translates to: LNIQAHQISPWKWVNLAGITFQP*GIWYPF
Trigger: AAATGGATACCAGATTCCCAAGGGCTGGAATGTTAT...CCCTGCAAGATTCACCCATTTCCATGGGGAAATCTGATGAGCTTGAATGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp CTCTGCCACATCATGAGTATCACAGATACTGTAGATAACATTCCAGCCCTTGGGTTAAATTCTTCCTTGTaGGTGAAGATCTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: LCHIMSITDTVDNIPALGLNSSL*VKISAT
Trigger: TGTGGCAGAGATCTTCACCAACAAGGAAGAATTTAA...CCCAAGGGCTGGAATGTTATCTACAGTATCTGTGATACTCATGATGTGGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACAATCTTGCAGGGAGATaGTCCACAGGATACACGGTG +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDNLAGR*STGYTV
Trigger: CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAATCTTGCAGGGAGATaGTCCACAGGATACACGGTG +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHNLAGR*STGYTV
Trigger: CACCGTGTATCCTGTGGACAATCTCCCTGCAAGATT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAAAATCTTTAACCGTTaGTTCCGCGCCGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHKIFNR*FRAEAE
Trigger: CTCTGCCTCGGCGCGGAACAAACGGTTAAAGATTTT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACAGGAACTTCCTCCGCTaGGTCAGACAATTAGTTCAC +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHRNFLR*VRQLVH
Trigger: GTGAACTAATTGTCTGACCAAGCGGAGGAAGTTCCT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACCAAAGAGGAGTTCGGTaGAAGATTGCTTTAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDQRGVR*KIALVP
Trigger: AGGCACTAAAGCAATCTTCAACCGAACTCCTCTTTG...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACATAACATTCCAGCCCTaGGGAATCTGGTATCCATTT +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHITFQP*GIWYPF
Trigger: AAATGGATACCAGATTCCCAAGGGCTGGAATGTTAT...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACATAACATTCCAGCCCTaGGGAATCTGGTATCCATTT +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDITFQP*GIWYPF
Trigger: AAATGGATACCAGATTCCCAAGGGCTGGAATGTTAT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp TTCTTCCTTGTTGGTGAAGATCTCTGCCACATCATGAGTATCACAGATACTGTAATTTTTGCAAATTCTTaGCCTACACAGCTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: FFLVGEDLCHIMSITDTVIFANS*PTQLLR
Trigger: CCTTAGGAGCTGTGTAGGCAAAGAATTTGCAAAAAT...TACAGTATCTGTGATACTCATGATGTGGCAGAGATCTTCACCAACAAGGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACTTAAATTCTTCCTTGTaGGTGAAGATCTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHLNSSL*VKISAT
Trigger: TGTGGCAGAGATCTTCACCAACAAGGAAGAATTTAA...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS-3UTR CAA 90 bp CTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACACAGACATTTTTGCAAATTCTTaGCCTACACAGCTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: LSDCRRIYRDTSGITHTDIFANS*PTQLLR
Trigger: CCTTAGGAGCTGTGTAGGCAAAGAATTTGCAAAAAT...GTCTGTGTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS TCA 90 bp ATGTATTTAAGTTGTTCCAAAATTTCCATGTCCAACTTGTTGTCTTaGTTGCTCTTGCAAAGTAAACCCTTACTCTTCAGCTCTTCTCGC +
Preference number: 5 (lower is better)
Translates to: MYLSCSKISMSNLLS*LLLQSKPLLFSSSR
Trigger: GCGAGAAGAGCTGAAGAGTAAGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGACATGGAAATTTTGGAACAACTTAAATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000623162.1
ENST00000624589.3
CDS-3UTR CAA 90 bp GGGAATCTAAGTGACTGTAGAAGAATTTACAGAGATACGTCTGGAATAACACACCCCGATGTATTTAAGTaGTTCCAAAATTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: GNLSDCRRIYRDTSGITHPDVFK*FQNFHV
Trigger: GACATGGAAATTTTGGAACAACTTAAATACATCGGG...GTGTGTTATTCCAGACGTATCTCTGTAAATTCTTCTACAGTCACTTAGATTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224356.5
ENST00000371531.5
CDS GCA 72 bp ACGCCCAGGTCCCGCGCCCCTAGTCCGCAGCCCGTTTaGCGCCCTTACCCGGTACAGCCCGCTGAAGGGCAC +
Preference number: 6 (lower is better)
Translates to: TPRSRAPSPQPV*RPYPVQPAEGH
Trigger: GTGCCCTTCAGCGGGCTGTACCGGGTAAGGGCGGCAAACGGGCTGCGGACTAGGGGCGCGGGACCTGGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622925.1
CDS GCA 72 bp CCCACGAGTGCTCGATCAACAGCTGCAGCGCGTCTTTaGAGCCCTGGCCCGCCTCGGATGCCCGCAGCCCGC +
Preference number: 6 (lower is better)
Translates to: PTSARSTAAARL*SPGPPRMPAAR
Trigger: GCGGGCTGCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCACTCGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS GCA 72 bp CGCACCGACGCTGGCCAGTGGACCGACACCAGCCGGTaGTCTCCGAGCAAGATGCGCCGCACATTGTCCGCG +
Preference number: 6 (lower is better)
Translates to: RTDAGQWTDTSR*SPSKMRRTLSA
Trigger: CGCGGACAATGTGCGGCGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGTGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 72 bp CTGCAGCGCGTCTTTGCAGCCCTGGCCCGCCTCGGATaGCCGCAGCCCGCAGATCTTGGCGCGAATGTTCTG +
Preference number: 6 (lower is better)
Translates to: LQRVFAALARLG*PQPADLGANVL
Trigger: CAGAACATTCGCGCCAAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS CCA 72 bp GAGGCAGCCAGATCCCAGAATGGTGCGCACCGACGCTaGCCAGTGGACCGACACCAGCCGGTGCTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: EAARSQNGAHRR*PVDRHQPVLSE
Trigger: CTCGGAGAGCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGTGCGCACCATTCTGGGATCTGGCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS CAA 72 bp CCGGAATTCCAAGCTCTAGCCTTCCCGGCGGTCTCTTaGGAATCCCTCCCGCCCGGTCCCACCCGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: PEFQALAFPAVS*ESLPPGPTRCP
Trigger: GGGGCAGCGGGTGGGACCGGGCGGGAGGGATTCCAAAGAGACCGCCGGGAAGGCTAGAGCTTGGAATTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371531.5
CDS GCA 72 bp AGTGGACCGACACCAGCCGGTGCTCTCCGAGCAAGATaGGCCGCACATTGTCCGCGCCCATCACCCGTACGG +
Preference number: 6 (lower is better)
Translates to: SGPTPAGALRAR*AAHCPRPSPVR
Trigger: CCGTACGGGTGATGGGCGCGGACAATGTGCGGCGCATCTTGCTCGGAGAGCACCGGCTGGTGTCGGTCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 72 bp CGCTCTCCCCTCTCCCACGAGTGCTCGATCAACAGCTaGAGCGCGTCTTTGCAGCCCTGGCCCGCCTCGGAT +
Preference number: 6 (lower is better)
Translates to: RSPLSHECSINS*SASLQPWPASD
Trigger: ATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCACTCGTGGGAGAGGGGAGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS CCA 72 bp TGCTCGATCAACAGCTGCAGCGCGTCTTTGCAGCCCTaGCCCGCCTCGGATGCCCGCAGCCCGCAGATCTTG +
Preference number: 6 (lower is better)
Translates to: CSINSCSASLQP*PASDARSPQIL
Trigger: CAAGATCTGCGGGCTGCGGGCATCCGAGGCGGGCCAGGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS TCA 72 bp GCAGCCCGTTTGCCGCCCTTACCCGGTACAGCCCGCTaGAGGGCACGTCGATGGGCAGCGAGAAGAGATTGC +
Preference number: 6 (lower is better)
Translates to: AARLPPLPGTAR*RARRWAARRDC
Trigger: GCAATCTCTTCTCGCTGCCCATCGACGTGCCCTTCAGCGGGCTGTACCGGGTAAGGGCGGCAAACGGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622925.1
CDS GCA 72 bp TTGCGGGTCATTTCCTCGAAGGCCTCCACAAGCTGCTaGTCGGAGTCCCCGTCGCCCGCCAGTTGGGGTTCG +
Preference number: 6 (lower is better)
Translates to: LRVISSKASTSC*SESPSPASWGS
Trigger: CGAACCCCAACTGGCGGGCGACGGGGACTCCGAGCAGCAGCTTGTGGAGGCCTTCGAGGAAATGACCCGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 72 bp GCCTGCATGTCCAGCCGCTCTCCCCTCTCCCACGAGTaGTCGATCAACAGCTGCAGCGCGTCTTTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: ACMSSRSPLSHE*SINSCSASLQP
Trigger: GGGCTGCAAAGACGCGCTGCAGCTGTTGATCGAGCACTCGTGGGAGAGGGGAGAGCGGCTGGACATGCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS CCA 72 bp CCAGATCCCAGAATGGTGCGCACCGACGCTGGCCAGTaGACCGACACCAGCCGGTGCTCTCCGAGCAAGATG +
Preference number: 6 (lower is better)
Translates to: PDPRMVRTDAGQ*TDTSRCSPSKM
Trigger: CATCTTGCTCGGAGAGCACCGGCTGGTGTCGGTCCACTGGCCAGCGTCGGTGCGCACCATTCTGGGATCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS CCA 72 bp ACAAGCTGCTGCTCGGAGTCCCCGTCGCCCGCCAGTTaGGGTTCGCAGCCCAGTAGGATGCGCATGGCGATT +
Preference number: 6 (lower is better)
Translates to: TSCCSESPSPAS*GSQPSRMRMAI
Trigger: AATCGCCATGCGCATCCTACTGGGCTGCGAACCCCAACTGGCGGGCGACGGGGACTCCGAGCAGCAGCTTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS TCA 72 bp TCTTGGCGCGAATGTTCTGCTCGATGCGCGCGTGAATaGGGTTCCGCGCCTTCATGCCCCGGTACAGCCCGC +
Preference number: 6 (lower is better)
Translates to: SWRECSARCARE*GSAPSCPGTAR
Trigger: GCGGGCTGTACCGGGGCATGAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCAGAACATTCGCGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS CAA 90 bp CGGTACAGCCCGCTGAAGGGCACGTCGATGGGCAGCGAGAAGAGATaGCGGGTCATTTCCTCGAAGGCCTCCACAAGCTGCTGCTCGGAG +
Preference number: 6 (lower is better)
Translates to: RYSPLKGTSMGSEKR*RVISSKASTSCCSE
Trigger: CTCCGAGCAGCAGCTTGTGGAGGCCTTCGAGGAAATGACCCGCAATCTCTTCTCGCTGCCCATCGACGTGCCCTTCAGCGGGCTGTACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS TCA 72 bp CAGATCTTGGCGCGAATGTTCTGCTCGATGCGCGCGTaGATGAGGTTCCGCGCCTTCATGCCCCGGTACAGC +
Preference number: 6 (lower is better)
Translates to: QILARMFCSMRA*MRFRAFMPRYS
Trigger: GCTGTACCGGGGCATGAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCAGAACATTCGCGCCAAGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS TCA 72 bp TCTTGGCGCGAATGTTCTGCTCGATGCGCGCGTGAATaGGGTTCCGCGCCTTCATGCCCTGAGCGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SWRECSARCARE*GSAPSCPERRE
Trigger: CTCTCTGCGCTCAGGGCATGAAGGCGCGGAACCTCATTCACGCGCGCATCGAGCAGAACATTCGCGCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622925.1
CDS CAA 72 bp CCGCTGAAGGGCACGTCGATGGGCAGCGAGAAGAGATaGCGGGTCATTTCCTCGAAGGCCTCCACAAGCTGC +
Preference number: 6 (lower is better)
Translates to: PLKGTSMGSEKR*RVISSKASTSC
Trigger: GCAGCTTGTGGAGGCCTTCGAGGAAATGACCCGCAATCTCTTCTCGCTGCCCATCGACGTGCCCTTCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS GCA 72 bp AGCATTCGAGTGCCTCGCGGCTTCTTGCGCTGCTTGTaGGAGGAGTCGTGCAGGTTAGAGAGGCAGCCAGAT +
Preference number: 6 (lower is better)
Translates to: SIRVPRGFLRCL*EESCRLERQPD
Trigger: ATCTGGCTGCCTCTCTAACCTGCACGACTCCTCGCACAAGCAGCGCAAGAAGCCGCGAGGCACTCGAATGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624589.3
CDS GCA 72 bp CACTTCCTCGGTGATCACCGGCACGTAGCATTCGAGTaGCTCGCGGCTGAAGGCCCGCATAATCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: HFLGDHRHVAFE*LAAEGPHNHLL
Trigger: AAGAAGGTGATTATGCGGGCCTTCAGCCGCGAGGCACTCGAATGCTACGTGCCGGTGATCACCGAGGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
CDS GCA 72 bp CTGAAGGCCCGCATAATCACCTTCTTGCGCTGCTTGTaGGAGGAGTCGTGCAGGTTAGAGAGGCAGCCAGAT +
Preference number: 6 (lower is better)
Translates to: LKARIITFLRCL*EESCRLERQPD
Trigger: ATCTGGCTGCCTCTCTAACCTGCACGACTCCTCGCACAAGCAGCGCAAGAAGGTGATTATGCGGGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
CDS GCA 72 bp TGGGTAGAGCCCCAGGTAAGTGATCAGAGATGTGGCTaGACTGGCCGTGGTTTCGTGTCCTCCAAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: WVEPQVSDQRCG*TGRGFVSSKEE
Trigger: CTCCTCTTTGGAGGACACGAAACCACGGCCAGTGCAGCCACATCTCTGATCACTTACCTGGGGCTCTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000623162.1
ENST00000624589.3
CDS TCA 72 bp GTACGGTGGGCCGCCCGAACAGATGCGTCTTGTAGATaGAGCCGTATTTCCTGCGCTTCATCTGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: VRWAARTDASCR*SRISCASSAGT
Trigger: AGTTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTACAAGACGCATCTGTTCGGGCGGCCCACCGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000622925.1
ENST00000624589.3
CDS CAA 72 bp TGGCCGTGGTTTCGTGTCCTCCAAAGAGGAGTTCGGTaGAAGATTGCTTTAGTGCCTGCATGTCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: WPWFRVLQRGVR*KIALVPACPAA
Trigger: AGCGGCTGGACATGCAGGCACTAAAGCAATCTTCAACCGAACTCCTCTTTGGAGGACACGAAACCACGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000624589.3
CDS CCA 72 bp ACTCTTCAGCTCTTCTCGCACTTTCTGGAGAACATGTaGGTAGAGCCCCAGGTAAGTGATCAGAGATGTGGC +
Preference number: 6 (lower is better)
Translates to: TLQLFSHFLENM*VEPQVSDQRCG
Trigger: GCCACATCTCTGATCACTTACCTGGGGCTCTACCCACATGTTCTCCAGAAAGTGCGAGAAGAGCTGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000623162.1
ENST00000624589.3
CDS CAA 90 bp CATGATGGGAGAGACTGGGAGGGGGAAACAGCAGCTAATGGCCATTaGCCTGCCCAAATCCACTATCTATTTACAATCCCAGGAGAATGC +
Preference number: 6 (lower is better)
Translates to: HDGRDWEGETAANGH*PAQIHYLFTIPGEC
Trigger: GCATTCTCCTGGGATTGTAAATAGATAGTGGATTTGGGCAGGCAAATGGCCATTAGCTGCTGTTTCCCCCTCCCAGTCTCTCCCATCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625202.1
CDS CAA 90 bp TGGCTGCACTGGCCGTGGTTTCGTGTCCTCCAAAGAGGAGTTCGGTaGAAGATTGCTTTAGTGCCTAAGAATAGAGTGAGACCCACATTC +
Preference number: 6 (lower is better)
Translates to: WLHWPWFRVLQRGVR*KIALVPKNRVRPTF
Trigger: GAATGTGGGTCTCACTCTATTCTTAGGCACTAAAGCAATCTTCAACCGAACTCCTCTTTGGAGGACACGAAACCACGGCCAGTGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623162.1
CDS CAA 72 bp TGGCCGTGGTTTCGTGTCCTCCAAAGAGGAGTTCGGTaGAAGATTGCTTTAGTGCCTAAGAATAGAGTGAGA +
Preference number: 6 (lower is better)
Translates to: WPWFRVLQRGVR*KIALVPKNRVR
Trigger: TCTCACTCTATTCTTAGGCACTAAAGCAATCTTCAACCGAACTCCTCTTTGGAGGACACGAAACCACGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623162.1
CDS GCA 72 bp CCTAAGAATAGAGTGAGACCCACATTCTCACAAGTCTaGCTGCGGTTTGACAGAAGGATTACTCAGAATCGA +
Preference number: 6 (lower is better)
Translates to: PKNRVRPTFSQV*LRFDRRITQNR
Trigger: TCGATTCTGAGTAATCCTTCTGTCAAACCGCAGGCAGACTTGTGAGAATGTGGGTCTCACTCTATTCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623162.1
CDS GCA 72 bp AAATTTCCATGTCCAACTTGTTGTCTTGATTGCTCTTaGAAAGTAAACCCTTACTCTTCAGCTCTTCTCGCA +
Preference number: 6 (lower is better)
Translates to: KFPCPTCCLDCS*KVNPYSSALLA
Trigger: TGCGAGAAGAGCTGAAGAGTAAGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGACATGGAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000623162.1
ENST00000624589.3
CDS TCA 72 bp AGTTGTTCCAAAATTTCCATGTCCAACTTGTTGTCTTaGTTGCTCTTGCAAAGTAAACCCTTACTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SCSKISMSNLLS*LLLQSKPLLFS
Trigger: GCTGAAGAGTAAGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGACATGGAAATTTTGGAACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000623162.1
ENST00000624589.3
CDS GCA 72 bp GTTCCAAAATTTCCATGTCCAACTTGTTGTCTTGATTaGTCTTGCAAAGTAAACCCTTACTCTTCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: VPKFPCPTCCLD*SCKVNPYSSAL
Trigger: AAGAGCTGAAGAGTAAGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGACATGGAAATTTTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224356.5
ENST00000371531.5
ENST00000623162.1
ENST00000624589.3
CDS TCA 72 bp AGTTGTTCCAAAATTTCCATGTCCAACTTGTTGTCTTaGTTGCTCTTGCAAAGTAAACCCTATCAAAACAGT +
Preference number: 6 (lower is better)
Translates to: SCSKISMSNLLS*LLLQSKPYQNS
Trigger: ACTGTTTTGATAGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGACATGGAAATTTTGGAACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625202.1
CDS GCA 72 bp GTTCCAAAATTTCCATGTCCAACTTGTTGTCTTGATTaGTCTTGCAAAGTAAACCCTATCAAAACAGTCATA +
Preference number: 6 (lower is better)
Translates to: VPKFPCPTCCLD*SCKVNPIKTVI
Trigger: TATGACTGTTTTGATAGGGTTTACTTTGCAAGAGCAATCAAGACAACAAGTTGGACATGGAAATTTTGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625202.1