RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP24A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000019186

Ensembl transcript IDs: ENST00000216862.8, ENST00000395954.3, ENST00000395955.7, ENST00000460643.1, ENST00000472970.1, ENST00000487593.1

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCTGACACAGGTGAAGTGTAAACCAGCAGTGAACCCTGTAGAATaGCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATG +
Preference number: 1 (lower is better)
Translates to: VLTQVKCKPAVNPVE*LGSQHSVRFPELDM
Trigger: CATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCATTCTACAGGGTTCACTGCTGGTTTACACTTCACCTGTGTCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR CCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCACCCTGTAGAATGCCTTaGATCCCAGCACTCAGTCCG +
Preference number: 2 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAPCRMP*IPALSP
Trigger: CGGACTGAGTGCTGGGATCCAAGGCATTCTACAGGG...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR TCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGCTCAGTCCGCTTCCCTaGGTTGGATATGATGTTAGC +
Preference number: 2 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVLSPLP*VGYDVS
Trigger: GCTAACATCATATCCAACTCAGGGAAGCGGACTGAG...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR TCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCTCAGTCCGCTTCCCTaGGTTGGATATGATGTTAGC +
Preference number: 2 (lower is better)
Translates to: ISMQEERNFMGGLITLTILSPLP*VGYDVS
Trigger: GCTAACATCATATCCAACTCAGGGAAGCGGACTGAG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR CCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCACAGAGCTACAGTAAATaGATTGTCAGTATTACTCCC +
Preference number: 2 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAQSYSK*IVSITP
Trigger: GGGAGTAATACTGACAATCCATTTACTGTAGCTCTG...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR GCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGTGAACCCTGTAGAATaGCTTGGATCCCAGCACTCA +
Preference number: 2 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLVNPVE*LGSQHS
Trigger: TGAGTGCTGGGATCCAAGGCATTCTACAGGGTTCAC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR CCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGCAGAGCTACAGTAAATaGATTGTCAGTATTACTCCC +
Preference number: 2 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRQSYSK*IVSITP
Trigger: GGGAGTAATACTGACAATCCATTTACTGTAGCTCTG...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR GCA 72 bp CAGGTGAAGTGTAAACCAGCAGTGAACCCTGTAGAATaGCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: QVKCKPAVNPVE*LGSQHSVRFPE
Trigger: CTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCATTCTACAGGGTTCACTGCTGGTTTACACTTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR TCA 72 bp AGAATGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTaGGTTGGATATGATGTTAGCAAATACCACCATCTG +
Preference number: 3 (lower is better)
Translates to: RMPWIPALSPLP*VGYDVSKYHHL
Trigger: CAGATGGTGGTATTTGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGTCCGCTTCCCTGAGTaGGATATGATGTTAGCAAAT +
Preference number: 3 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTVRFPE*DMMLAN
Trigger: ATTTGCTAACATCATATCCAACTCAGGGAAGCGGAC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
3UTR-3UTR CAA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGCTACAGTAAATGGATaGTCAGTATTACTCCCAGCC +
Preference number: 3 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRATVNG*SVLLPA
Trigger: GGCTGGGAGTAATACTGACAATCCATTTACTGTAGC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCACAGGCTGCCCAGCAGTaGCCAGCTGGTGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAQAAQQ*PAGGAR
Trigger: CCGGGCCCCACCAGCTGGCCACTGCTGGGCAGCCTG...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAAGGGCGGCCGCGTTCTaGGTCTCGCCACCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLARAAAF*VSPPAV
Trigger: GACAGCTGGTGGCGAGACTCAGAACGCGGCCGCCCT...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAGGACTGCGCAGCTGCTaGAGGAAGGCGGCAAGCGAG +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAGLRSC*RKAASE
Trigger: CTCGCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCC...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCATGGGGAGTTCCCGGCTaGGCACCAGGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAWGVPG*APGCLS
Trigger: ACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCA...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAAGGCCTTCCACGGTTTaGTCTCCAGCCGCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLARPSTV*SPAAAG
Trigger: ACCCGCAGCGGCTGGAGATCAAACCGTGGAAGGCCT...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAGAGGATGCTCGACGCTaGACCACGCGACAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAEDARR*TTRQPQ
Trigger: CTGAGGCTGTCGCGTGGTGCAGCGTCGAGCATCCTC...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGGACCTCGGCGAGGATaGTCGACGCTGCACCACGCG +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAGPRRG*STLHHA
Trigger: CGCGTGGTGCAGCGTCGAGCATCCTCGCCGAGGTCC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGACCAGTCTCGGGGGCTaGCTCGGACTGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVTSLGG*LGLRSC
Trigger: GCAGCTGCGCAGTCCGAGGCAGCCCCCGAGACTGGT...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGCGAGCGGCTCTTGCTaGTGGGGGAGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAASGSC*WGSSWQ
Trigger: CTGCCATGAGCTCCCCCATCAGCAAGAGCCGCTCGC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGGCACCTCTCGCGGCTaGGGGGACGTGTACGCCGTA +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTGTSRG*GDVYAV
Trigger: TACGGCGTACACGTCCCCTCAGCCGCGAGAGGTGCC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGGGTGCCTCCTTGCACTaGCCGCAGGGGCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVGASLH*PQGLEE
Trigger: CTCTTCCAGCCCCTGCGGCCAGTGCAAGGAGGCACC...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCATCCCAGGCCAGAGTGTaGTCCTGCCAGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLASQARV*SCQTLV
Trigger: CACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGA...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTGGGGAGTTCCCGGCTaGGCACCAGGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVWGVPG*APGCLS
Trigger: ACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGCGAGCGGCTCTTGCTaGTGGGGGAGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTASGSC*WGSSWQ
Trigger: CTGCCATGAGCTCCCCCATCAGCAAGAGCCGCTCGC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAGCCAGACCTTGGTGTTaGGGCTCTTGTGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAARPWC*GSCAAR
Trigger: TCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGC...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACTCGGACTGCGCAGCTaGTGCAGGAAGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTLGLRS*CRKAAS
Trigger: GCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCCGAG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCATTGATCTCCAGCCGCTaGGGGTACGCGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYALISSR*GYALSV
Trigger: CACCGAGAGCGCGTACCCGCAGCGGCTGGAGATCAA...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTTGATCTCCAGCCGCTaGGGGTACGCGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVLISSR*GYALSV
Trigger: CACCGAGAGCGCGTACCCGCAGCGGCTGGAGATCAA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAGGCTGGGCACCAGGGTaGCTGAGTGTAGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAGWAPG*LSVASQ
Trigger: TTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCC...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGCCTCTAGGGTCTGGCTaGAGCCACGGGGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVPLGSG*SHGEVS
Trigger: TGACACCTCCCCGTGGCTCCAGCCAGACCCTAGAGG...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGGCAGGAGGATGGGGTaGGGCGAGGTTGGTACGAGG +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTGRRMG*GEVGTR
Trigger: CCTCGTACCAACCTCGCCCCACCCCATCCTCCTGCC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACATGTCAGCGGGCAGACTaGCACCTCTCGCGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTCQRAD*HLSRLR
Trigger: CCTCAGCCGCGAGAGGTGCCAGTCTGCCCGCTGACA...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGCAGGCTGCCCAGCAGTaGCCAGCTGGTGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRQAAQQ*PAGGAR
Trigger: CCGGGCCCCACCAGCTGGCCACTGCTGGGCAGCCTG...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGTCAAGGAGGGTAGATaGGATGCTGCTGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAVKEGR*DAAGAA
Trigger: CGCAGCGCCAGCAGCATCTCATCTACCCTCCTTGAC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCACATGGCGAGCCCAGGTaGACCGACTCAAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAHGEPR*TDSKEP
Trigger: GGGTTCCTTTGAGTCGGTGCACCTGGGCTCGCCATG...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGGGGTGGGGCGAGGTTaGTACGAGGTGCTAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTGVGRG*YEVLVG
Trigger: TCCCACTAGCACCTCGTACCAACCTCGCCCCACCCC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR TCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGAGGGCCAGCTGGTGTaGTGGAGCGGGGTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLEGQLV*WSGVRR
Trigger: CCGCCTCACCCCGCTCCATCACACCAGCTGGCCCTC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGGCACCTCTCGCGGCTaGGGGGACGTGTACGCCGTA +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRGTSRG*GDVYAV
Trigger: TACGGCGTACACGTCCCCTCAGCCGCGAGAGGTGCC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGAGGGCGGCCGCGTTCTaGGTCTCGCCACCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRRAAAF*VSPPAV
Trigger: GACAGCTGGTGGCGAGACTCAGAACGCGGCCGCCCT...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGGCAGCTCGACTGGAGTaGCCATCATCCTCCCAAACG +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVAARLE*PSSSQT
Trigger: CGTTTGGGAGGATGATGGTCACTCCAGTCGAGCTGC...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAAGATGCTGCTGGCGCTaGGTTTCCTCCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYARCCWR*VSSCPS
Trigger: AGAGGGACAGGAGGAAACGCAGCGCCAGCAGCATCT...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGGGGCTGCCTCGGACTaGGCAGCTGCTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRGAASD*AAAAGR
Trigger: CCTTCCTGCAGCAGCTGCGCAGTCCGAGGCAGCCCC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCACCAGTCTCGGGGGCTaGCTCGGACTGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTITSLGG*LGLRSC
Trigger: GCAGCTGCGCAGTCCGAGGCAGCCCCCGAGACTGGT...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACATGGCGAGCCCAGGTaGACCGACTCAAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTHGEPR*TDSKEP
Trigger: GGGTTCCTTTGAGTCGGTGCACCTGGGCTCGCCATG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGCCCGTAGCCTTCTTTaGGGTAGTCGCGATAGGCCT +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAARSLL*GSRDRP
Trigger: AGGCCTATCGCGACTACCGCAAAGAAGGCTACGGGC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGGCTGGGCACCAGGGTaGCTGAGTGTAGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAGWAPG*LSVASQ
Trigger: TTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTGGGAGTCCTCCTGTTaGTCCGCAAGGCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVWESSC*SARLTS
Trigger: AGAGGTCAGCCTTGCGGACCAACAGGAGGACTCCCA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR TCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATGTGATGGAGCGGGGTaGGGCGGGACAGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTCDGAG*GGTGSR
Trigger: TCTGCTGCCTGTCCCGCCTCACCCCGCTCCATCACA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR TCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCATCTGCACTAGGCTGCTaGGAATACTTCTCTAACCGG +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLASALGC*EYFSNR
Trigger: CCGGTTAGAGAAGTATTCTCAGCAGCCTAGTGCAGA...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAAGAGCCAAATGCAGTTaGAGCTCTGCTAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLARAKCS*SSANRR
Trigger: TCGCCGATTAGCAGAGCTTCAACTGCATTTGGCTCT...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACAGCATTGGTGCCTCCTTaGACTGGCCGCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTALVPP*TGRRGW
Trigger: CCAGCCCCTGCGGCCAGTGCAAGGAGGCACCAATGC...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGCTCGGACTGCGCAGCTaGTGCAGGAAGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRLGLRS*CRKAAS
Trigger: GCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCCGAG...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGGGGCTGCCTCGGACTaGGCAGCTGCTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLGAASD*AAAAGR
Trigger: CCTTCCTGCAGCAGCTGCGCAGTCCGAGGCAGCCCC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGCACTCCGGACCCGCTaGCAGTCTTCCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIALRTR*QSSPSR
Trigger: CCTGGAAGGGGAAGACTGGCAGCGGGTCCGGAGTGC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGCACTCCGGACCCGCTaGCAGTCTTCCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRALRTR*QSSPSR
Trigger: CCTGGAAGGGGAAGACTGGCAGCGGGTCCGGAGTGC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGCCAGAGTGTGGTCCTaGCAGACCTTGGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTARVWS*QTLVLR
Trigger: CCTCAACACCAAGGTCTGGCAGGACCACACTCTGGC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGGCAGGAGGATGGGGTaGGGCGAGGTTGGTACGAGG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRGRRMG*GEVGTR
Trigger: CCTCGTACCAACCTCGCCCCACCCCATCCTCCTGCC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCTGTCAGCGGGCAGACTaGCACCTCTCGCGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTICQRAD*HLSRLR
Trigger: CCTCAGCCGCGAGAGGTGCCAGTCTGCCCGCTGACA...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGCCCTGTAGAATGCCTTaGATCCCAGCACTCAGTCCG +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVPCRMP*IPALSP
Trigger: CGGACTGAGTGCTGGGATCCAAGGCATTCTACAGGG...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGTTGGTCCGCAAGGCTaGCCTCTAGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRVGPQG*PLGSGW
Trigger: CCAGCCAGACCCTAGAGGTCAGCCTTGCGGACCAAC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR TCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCAGGCCTTCCACGGTTTaGTCTCCAGCCGCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIRPSTV*SPAAAG
Trigger: ACCCGCAGCGGCTGGAGATCAAACCGTGGAAGGCCT...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGGACTGCGCAGCTGCTaGAGGAAGGCGGCAAGCGAG +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLGLRSC*RKAASE
Trigger: CTCGCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGGTACGCGCTCTCGGTaGGGTACAGCGCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRGTRSR*GTALPA
Trigger: TGCTGGAAGCGCTGTACCGCACCGAGAGCGCGTACC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGGTACGCGCTCTCGGTaGGGTACAGCGCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIGTRSR*GTALPA
Trigger: TGCTGGAAGCGCTGTACCGCACCGAGAGCGCGTACC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAATTCCTCAAATCTTCTaGCCGTGGCACCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAIPQIF*PWHLIL
Trigger: GAGAATCAGGTGCCACGGGCAGAAGATTTGAGGAAT...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCTGACCTCTAGGGTCTaGCTGGAGCCACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTILTSRV*LEPRGG
Trigger: ACCTCCCCGTGGCTCCAGCCAGACCCTAGAGGTCAG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGCTGGCAAAACGCGATaGGGAGTTCCCGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIAGKTR*GVPGWA
Trigger: TGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGAGGCGTATTATCGCTaGCAAAACGCGATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAEAYYR*QNAMGS
Trigger: ACTCCCCATCGCGTTTTGCCAGCGATAATACGCCTC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTGTCGTGCTGTTTCTTaGGACCCCCTTTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVCRAVS*DPLSRE
Trigger: TTCTCTGGAAAGGGGGTCTCAAGAAACAGCACGACA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGCCTCAGAGCATTGGTaGCTCCTTGCACTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIASEHW*LLALAA
Trigger: TGCGGCCAGTGCAAGGAGGCACCAATGCTCTGAGGC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTTGCCATACTTCTTGTaGTACTCCACCAGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVLPYFL*YSTRVS
Trigger: CGACACCCTGGTGGAGTACCACAAGAAGTATGGCAA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGTCCCAGGCCAGAGTGTaGTCCTGCCAGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRSQARV*SCQTLV
Trigger: CACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGA...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTGGCAAAACGCGATaGGGAGTTCCCGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLAGKTR*GVPGWA
Trigger: TGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGCAGCTCGACTGGAGTaGCCATCATCCTCCCAAACG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRAARLE*PSSSQT
Trigger: CGTTTGGGAGGATGATGGTCACTCCAGTCGAGCTGC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGCCAGACCTTGGTGTTaGGGCTCTTGTGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIARPWC*GSCAAR
Trigger: TCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACCAGCTGGAGCTCTGTaGCAGCAGCATACAATTCTT +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTPAGAL*QQHTIL
Trigger: AAGAATTGTATGCTGCTGTCACAGAGCTCCAGCTGG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAAGGAACCCAACTTCATaGGGAAAATCTTGCCATACT +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLARNPTS*GKSCHT
Trigger: AGTATGGCAAGATTTTCCGCATGAAGTTGGGTTCCT...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACAGCCCGTAGCCTTCTTTaGGGTAGTCGCGATAGGCCT +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTARSLL*GSRDRP
Trigger: AGGCCTATCGCGACTACCGCAAAGAAGGCTACGGGC...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTTCACCCAGAACTGTTaGCTTGTCAAGAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVFTQNC*LVKSPS
Trigger: ACTCGGACTCTTGACAAGGCAACAGTTCTGGGTGAA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCATTCACCCAGAACTGTTaGCTTGTCAAGAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAFTQNC*LVKSPS
Trigger: ACTCGGACTCTTGACAAGGCAACAGTTCTGGGTGAA...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGTGAACCCTGTAGAATaGCTTGGATCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTVNPVE*LGSQHS
Trigger: TGAGTGCTGGGATCCAAGGCATTCTACAGGGTTCAC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTCCCCTGCATTCTTCTaGAGAAGCCCAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVSPAFF*RSPNLF
Trigger: GAAGAGATTTGGGCTTCTCCAGAAGAATGCAGGGGA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAAGTCCGAGTTGTAAATaGTACACTCGGCGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYASPSCK*YTRRKP
Trigger: AGGCTTACGCCGAGTGTACCATTTACAACTCGGACT...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACAGGCTCATTGTCTGTaGCCTGGATGTCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTQAHCL*PGCRIC
Trigger: GCAAATACGACATCCAGGCCACAGACAATGAGCCTG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACGGCCAAGACCTCATTaGTTTTGTTGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTRPRPH*FCCPAS
Trigger: TGAAGCTGGACAACAAAATCAATGAGGTCTTGGCCG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATCCACCAGGGTGTCGTaGTGTTTCTTGAGACCCCCT +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTSTRVS*CFLRPP
Trigger: AGGGGGTCTCAAGAAACAGCACGACACCCTGGTGGA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCATCATGCGGAAAATCTTaGCATACTTCTTGTGGTACT +
Preference number: 4 (lower is better)
Translates to: CLGSQHSVRFPELDMMLASCGKS*HTSCGT
Trigger: AGTACCACAAGAAGTATGGCAAGATTTTCCGCATGA...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGTGTTGAGGCTCTTGTaGAGCTCGACTGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRVLRLL*SSTGVT
Trigger: GGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACAC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCCAGAGTGTGGTCCTaGCAGACCTTGGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLARVWS*QTLVLR
Trigger: CCTCAACACCAAGGTCTGGCAGGACCACACTCTGGC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCACCTGGATGTCGTATTTaGGGACAATTCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAPGCRI*GQFLWV
Trigger: TACCCAAAGGAATTGTCCGCAAATACGACATCCAGG...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS-3UTR TCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATGTCTGGGGACCTCTTaGAAAGGGAAAGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTCLGTS*KGKAGS
Trigger: ACTCCCAGCTTTCCCTTTTCAAGAGGTCCCCAGACA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTATCCACCAGGGTGTCGTaGTGTTTCTTGAGACCCCCT +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLSTRVS*CFLRPP
Trigger: AGGGGGTCTCAAGAAACAGCACGACACCCTGGTGGA...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACACACAGCTTCATCCCCTaGATTCTTCTGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTHSFIP*ILLEKP
Trigger: GGGCTTCTCCAGAAGAATGCAGGGGATGAAGCTGTG...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCACAGCTTCATCCCCTaGATTCTTCTGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIHSFIP*ILLEKP
Trigger: GGGCTTCTCCAGAAGAATGCAGGGGATGAAGCTGTG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGTGTTGAGGCTCTTGTaGAGCTCGACTGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLVLRLL*SSTGVT
Trigger: GGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACAC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGTCACAAAGGAAATCTaGACTAGGCTGCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAVTKEI*TRLLRI
Trigger: TATTCTCAGCAGCCTAGTGCAGATTTCCTTTGTGAC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACATACAAGTCTTCAACGTaGCCTCTTTCATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTYKSST*PLSSQS
Trigger: GCTCTGTGATGAAAGAGGCCACGTTGAAGACTTGTA...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGAGGCGTATTATCGCTaGCAAAACGCGATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSREAYYR*QNAMGS
Trigger: ACTCCCCATCGCGTTTTGCCAGCGATAATACGCCTC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTGCGGACAATTCCTTTaGGTAAAGCATATTCACCCA +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVCGQFL*VKHIHP
Trigger: TGGGTGAATATGCTTTACCCAAAGGAATTGTCCGCA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS-3UTR TCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATCTGCACTAGGCTGCTaGGAATACTTCTCTAACCGG +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTSALGC*EYFSNR
Trigger: CCGGTTAGAGAAGTATTCTCAGCAGCCTAGTGCAGA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACACCAGCTGGAGCTCTGTaGCAGCAGCATACAATTCTT +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTPAGAL*QQHTIL
Trigger: AAGAATTGTATGCTGCTGTCACAGAGCTCCAGCTGG...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGTCTGCCCGTGGCACCTaGTTCTCAGGTAATACACTT +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRSARGT*FSGNTL
Trigger: AAGTGTATTACCTGAGAATCAGGTGCCACGGGCAGA...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGCTCAGTCCGCTTCCCTaGGTTGGATATGATGTTAGC +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRLSPLP*VGYDVS
Trigger: GCTAACATCATATCCAACTCAGGGAAGCGGACTGAG...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCATCATGCGGAAAATCTTaGCATACTTCTTGTGGTACT +
Preference number: 4 (lower is better)
Translates to: TDTHTQTHTHMHVCASYASCGKS*HTSCGT
Trigger: AGTACCACAAGAAGTATGGCAAGATTTTCCGCATGA...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGTGAACCCTGTAGAATaGCTTGGATCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRVNPVE*LGSQHS
Trigger: TGAGTGCTGGGATCCAAGGCATTCTACAGGGTTCAC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAAGACACACACACACATaGATGTCTGTGCTTCATATG +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTRHTHT*MSVLHM
Trigger: CATATGAAGCACAGACATGCATGTGTGTGTGTGTCT...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGCAGATCTCTAACTTTTaGATGCTTTACACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVQISNF*MLYTCP
Trigger: GGGACAAGTGTAAAGCATGCAAAAGTTAGAGATCTG...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACAAAATTGTCTTCACTaGATCCCAACACCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTQNCLH*IPTPGY
Trigger: ATACCCAGGTGTTGGGATCCAGTGAAGACAATTTTG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTTTTCCAACGCCAAATaGAAGATGCGCAAAAGGATT +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVFSNAK*KMRKRI
Trigger: AATCCTTTTGCGCATCTTCCATTTGGCGTTGGAAAA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCAGGCTCATTGTCTGTaGCCTGGATGTCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIQAHCL*PGCRIC
Trigger: GCAAATACGACATCCAGGCCACAGACAATGAGCCTG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTCATTAGTTTCTTTTaGAAGGCACTCCGGACCCGC +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTFISFF*KALRTR
Trigger: GCGGGTCCGGAGTGCCTTTCAAAAGAAACTAATGAA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGTTCATTAGTTTCTTTTaGAAGGCACTCCGGACCCGC +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRFISFF*KALRTR
Trigger: GCGGGTCCGGAGTGCCTTTCAAAAGAAACTAATGAA...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTATCTGCCCGTGGCACCTaGTTCTCAGGTAATACACTT +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLSARGT*FSGNTL
Trigger: AAGTGTATTACCTGAGAATCAGGTGCCACGGGCAGA...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGCGTTCAGGTCTAAACTaGCTTGAATCTTCAAAATTG +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVRSGLN*LESSKL
Trigger: CAATTTTGAAGATTCAAGTCAGTTTAGACCTGAACG...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR TCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGCTGTGACTAAACTTTaGAACATTGCCCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRAVTKL*NIALHH
Trigger: GTGGTGCAGGGCAATGTTTCAAAGTTTAGTCACAGC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTCCTCAAATCTTCTaGCCGTGGCACCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIIPQIF*PWHLIL
Trigger: GAGAATCAGGTGCCACGGGCAGAAGATTTGAGGAAT...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTATTGCCATACTTCTTGTaGTACTCCACCAGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLLPYFL*YSTRVS
Trigger: CGACACCCTGGTGGAGTACCACAAGAAGTATGGCAA...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATCCCCTGCATTCTTCTaGAGAAGCCCAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTSPAFF*RSPNLF
Trigger: GAAGAGATTTGGGCTTCTCCAGAAGAATGCAGGGGA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAAGCTTTTGTTGCACTTaGGGATTACGGGATAAATTG +
Preference number: 4 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTSFCCT*GLRDKL
Trigger: CAATTTATCCCGTAATCCCCAAGTGCAACAAAAGCT...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCAGTCCGAGTTGTAAATaGTACACTCGGCGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTISPSCK*YTRRKP
Trigger: AGGCTTACGCCGAGTGTACCATTTACAACTCGGACT...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATCATTGTCTGTGGCCTaGATGTCGTATTTGCGGACA +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTSLSVA*MSYLRT
Trigger: TGTCCGCAAATACGACATCCAGGCCACAGACAATGA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCTCATTGTCTGTGGCCTaGATGTCGTATTTGCGGACA +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTISLSVA*MSYLRT
Trigger: TGTCCGCAAATACGACATCCAGGCCACAGACAATGA...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTACGGCCAAGACCTCATTaGTTTTGTTGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLRPRPH*FCCPAS
Trigger: TGAAGCTGGACAACAAAATCAATGAGGTCTTGGCCG...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTACCTGGGTATTTAGCATaGGCACTGTTCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLPGYLA*ALFLWV
Trigger: TACCCAAAGGAACAGTGCTCATGCTAAATACCCAGG...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACACTAATCGGCGACCAATaGACATTCTTTTTCCAACGC +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTLIGDQ*TFFFQR
Trigger: GCGTTGGAAAAAGAATGTGCATTGGTCGCCGATTAG...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTCTCTAACTTTTGCATaGTTTACACTTGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVSLTFA*FTLVPF
Trigger: AAATGGGACAAGTGTAAAGCATGCAAAAGTTAGAGA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATACAAGTCTTCAACGTaGCCTCTTTCATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTYKSST*PLSSQS
Trigger: GCTCTGTGATGAAAGAGGCCACGTTGAAGACTTGTA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACAAGGAACCCAACTTCATaGGGAAAATCTTGCCATACT +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTRNPTS*GKSCHT
Trigger: AGTATGGCAAGATTTTCCGCATGAAGTTGGGTTCCT...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGTCACAAAGGAAATCTaGACTAGGCTGCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIVTKEI*TRLLRI
Trigger: TATTCTCAGCAGCCTAGTGCAGATTTCCTTTGTGAC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR GCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTACCTGGATGTCGTATTTaGGGACAATCCAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLPGCRI*GQSNKE
Trigger: CTCTTTGTTGGATTGTCCGCAAATACGACATCCAGG...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR GCA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGAGACACACACACACATaGATGTCTGTGCTTCATATG +
Preference number: 4 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRRHTHT*MSVLHM
Trigger: CATATGAAGCACAGACATGCATGTGTGTGTGTGTCT...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACAAGCTTTTGTTGCACTTaGGGATTACGGGATAAATTG +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTSFCCT*GLRDKL
Trigger: CAATTTATCCCGTAATCCCCAAGTGCAACAAAAGCT...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCAGAGCTACAGTAAATaGATTGTCAGTATTACTCCC +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTIQSYSK*IVSITP
Trigger: GGGAGTAATACTGACAATCCATTTACTGTAGCTCTG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR TCA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCTTGAAGGTATACAGATaGAATCTGACAAGACGTGAA +
Preference number: 4 (lower is better)
Translates to: ISMQEERNFMGGLITLTILKVYR*NLTRRE
Trigger: TTCACGTCTTGTCAGATTTCATCTGTATACCTTCAA...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
3UTR CAA 72 bp CTAAGTAGTACATTAAGCAGAGCTACAGTAAATGGATaGTCAGTATTACTCCCAGCCCCAGAAAATTTAGCT +
Preference number: 4 (lower is better)
Translates to: LSSTLSRATVNG*SVLLPAPENLA
Trigger: AGCTAAATTTTCTGGGGCTGGGAGTAATACTGACAATCCATTTACTGTAGCTCTGCTTAATGTACTACTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACAAACCATCATTTAGCTTaGCTTACATTATTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTNHHLA*LTLLSR
Trigger: CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTT...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CCA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAAACCATCATTTAGCTTaGCTTACATTATTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLNHHLA*LTLLSR
Trigger: CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTT...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS TCA 90 bp GACTGCGCAGCTGCTGCAGGAAGGCGGCAAGCGAGCGGCTCTTGCTaGTGGGGGAGCTCATGGCAGCGGGGGACACCGGAGCGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: DCAAAAGRRQASGSC*WGSSWQRGTPERGK
Trigger: CTTCCCGCGCTCCGGTGTCCCCCGCTGCCATGAGCTCCCCCATCAGCAAGAGCCGCTCGCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS CCA 90 bp CGGCGAGGATGCTCGACGCTGCACCACGCGACAGCCTCAGAGCATTaGTGCCTCCTTGCACTGGCCGCAGGGGCTGGAAGAGGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: RRGCSTLHHATASEH*CLLALAAGAGRGWP
Trigger: CGGCCACCCTCTTCCAGCCCCTGCGGCCAGTGCAAGGAGGCACCAATGCTCTGAGGCTGTCGCGTGGTGCAGCGTCGAGCATCCTCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS TCA 90 bp GTCTCGCCACCAGCTGTCAGCGGGCAGACTGGCACCTCTCGCGGCTaGGGGGACGTGTACGCCGTAGATGTCACCAGTCTCGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: VSPPAVSGQTGTSRG*GDVYAVDVTSLGGC
Trigger: GCAGCCCCCGAGACTGGTGACATCTACGGCGTACACGTCCCCTCAGCCGCGAGAGGTGCCAGTCTGCCCGCTGACAGCTGGTGGCGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS GCA 90 bp CGAGGATGCTCGACGCTGCACCACGCGACAGCCTCAGAGCATTGGTaGCTCCTTGCACTGGCCGCAGGGGCTGGAAGAGGGTGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RGCSTLHHATASEHW*LLALAAGAGRGWPV
Trigger: CACCGGCCACCCTCTTCCAGCCCCTGCGGCCAGTGCAAGGAGGCACCAATGCTCTGAGGCTGTCGCGTGGTGCAGCGTCGAGCATCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS GCA 90 bp GCCGTAGATGTCACCAGTCTCGGGGGCTGCCTCGGACTGCGCAGCTaGTGCAGGAAGGCGGCAAGCGAGCGGCTCTTGCTGATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: AVDVTSLGGCLGLRS*CRKAASERLLLMGE
Trigger: CTCCCCCATCAGCAAGAGCCGCTCGCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCCGAGGCAGCCCCCGAGACTGGTGACATCTACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS CCA 90 bp GGCGGCCGCGTTCTGAGTCTCGCCACCAGCTGTCAGCGGGCAGACTaGCACCTCTCGCGGCTGAGGGGACGTGTACGCCGTAGATGTCAC +
Preference number: 5 (lower is better)
Translates to: GGRVLSLATSCQRAD*HLSRLRGRVRRRCH
Trigger: GTGACATCTACGGCGTACACGTCCCCTCAGCCGCGAGAGGTGCCAGTCTGCCCGCTGACAGCTGGTGGCGAGACTCAGAACGCGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS CCA 90 bp CTTGAGACCCCCTTTCCAGAGAATCTGCAGCAGGCTGCCCAGCAGTaGCCAGCTGGTGGGGCCCGGCAGGGCGGCCGCGTTCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LETPFPENLQQAAQQ*PAGGARQGGRVLSL
Trigger: GAGACTCAGAACGCGGCCGCCCTGCCGGGCCCCACCAGCTGGCCACTGCTGGGCAGCCTGCTGCAGATTCTCTGGAAAGGGGGTCTCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS GCA 90 bp GTAGATGTCACCAGTCTCGGGGGCTGCCTCGGACTGCGCAGCTGCTaGAGGAAGGCGGCAAGCGAGCGGCTCTTGCTGATGGGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: VDVTSLGGCLGLRSC*RKAASERLLLMGEL
Trigger: GAGCTCCCCCATCAGCAAGAGCCGCTCGCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCCGAGGCAGCCCCCGAGACTGGTGACATCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS TCA 90 bp GCCCGTAGCCTTCTTTGCGGTAGTCGCGATAGGCCTTCCACGGTTTaGTCTCCAGCCGCTGCGGGTACGCGCTCTCGGTGCGGTACAGCG +
Preference number: 5 (lower is better)
Translates to: ARSLLCGSRDRPSTV*SPAAAGTRSRCGTA
Trigger: CGCTGTACCGCACCGAGAGCGCGTACCCGCAGCGGCTGGAGATCAAACCGTGGAAGGCCTATCGCGACTACCGCAAAGAAGGCTACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CCA 90 bp CTGCGGGTACGCGCTCTCGGTGCGGTACAGCGCTTCCAGCAGGCATaGCGAGCCCAGGTGCACCGACTCAAAGGAACCCAACTTCATGCG +
Preference number: 5 (lower is better)
Translates to: LRVRALGAVQRFQQA*RAQVHRLKGTQLHA
Trigger: CGCATGAAGTTGGGTTCCTTTGAGTCGGTGCACCTGGGCTCGCCATGCCTGCTGGAAGCGCTGTACCGCACCGAGAGCGCGTACCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CCA 90 bp CTCCGCCTCTTCACAATTTCCAGGCGCCGTCAGGCTCATCAGGTCTaGCCGCATGCCCAGGTCCCTCGGATTGGACTCACAGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: LRLFTISRRRQAHQV*PHAQVPRIGLTGSA
Trigger: TGCTGATCCTGTGAGTCCAATCCGAGGGACCTGGGCATGCGGCCAGACCTGATGAGCCTGACGGCGCCTGGAAATTGTGAAGAGGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472970.1
CDS GCA 90 bp ATCGCTGGCAAAACGCGATGGGGAGTTCCCGGCTGGGCACCAGGGTaGCTGAGTGTAGCATCTCAACAGGCTCATTGTCTGTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: IAGKTRWGVPGWAPG*LSVASQQAHCLWPG
Trigger: TCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000460643.1
CDS GCA 90 bp CTCTCGGTGCGGTACAGCGCTTCCAGCAGGCATGGCGAGCCCAGGTaGACCGACTCAAAGGAACCCAACTTCATGCGGAAAATCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LSVRYSASSRHGEPR*TDSKEPNFMRKILP
Trigger: TGGCAAGATTTTCCGCATGAAGTTGGGTTCCTTTGAGTCGGTGCACCTGGGCTCGCCATGCCTGCTGGAAGCGCTGTACCGCACCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS GCA 90 bp CAGGCCAGAGTGTGGTCCTGCCAGACCTTGGTGTTGAGGCTCTTGTaGAGCTCGACTGGAGTGACCATCATCCTCCCAAACGTGCTCATC +
Preference number: 5 (lower is better)
Translates to: QARVWSCQTLVLRLL*SSTGVTIILPNVLI
Trigger: GATGAGCACGTTTGGGAGGATGATGGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS CCA 90 bp CTGAGGCGTATTATCGCTGGCAAAACGCGATGGGGAGTTCCCGGCTaGGCACCAGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATTGT +
Preference number: 5 (lower is better)
Translates to: LRRIIAGKTRWGVPG*APGCLSVASQQAHC
Trigger: ACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGCGATAATACGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000460643.1
CDS CCA 90 bp AGCAAATACCACCATCTGAGGCGTATTATCGCTGGCAAAACGCGATaGGGAGTTCCCGGCTGGGCACCAGGGTGCCTGAGTGTAGCATCT +
Preference number: 5 (lower is better)
Translates to: SKYHHLRRIIAGKTR*GVPGWAPGCLSVAS
Trigger: AGATGCTACACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGCGATAATACGCCTCAGATGGTGGTATTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS CCA 90 bp AATGGCTGTTTTGGTCTGAGGCGTATTATCGCTGGCAAAACGCGATaGGGAGTTCCCGGCTGGGCACCAGGGTGCCTGAGTGTAGCATCT +
Preference number: 5 (lower is better)
Translates to: NGCFGLRRIIAGKTR*GVPGWAPGCLSVAS
Trigger: AGATGCTACACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGCGATAATACGCCTCAGACCAAAACAGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460643.1
CDS GCA 90 bp GCTTTGACTGATTTGAAAATGGTGTCCCAGGCCAGAGTGTGGTCCTaGCAGACCTTGGTGTTGAGGCTCTTGTGCAGCTCGACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: ALTDLKMVSQARVWS*QTLVLRLLCSSTGV
Trigger: CACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGACACCATTTTCAAATCAGTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000487593.1
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGCAAGCGAGCGGCTCTaGCTGATGGGGGAGCTCATG +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTASERL*LMGELM
Trigger: CATGAGCTCCCCCATCAGCAAGAGCCGCTCGCTTGC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCATGCCAGACCTTGGTGTaGAGGCTCTTGTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYACQTLV*RLLCSS
Trigger: CGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCA...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAATCTCAACAGGCTCATaGTCTGTGGCCTGGATGTCG +
Preference number: 5 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAISTGS*SVAWMS
Trigger: CGACATCCAGGCCACAGACAATGAGCCTGTTGAGAT...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS GCA 90 bp CCAGGTGCACCGACTCAAAGGAACCCAACTTCATGCGGAAAATCTTaGCATACTTCTTGTGGTACTCCACCAGGGTGTCGTGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PGAPTQRNPTSCGKS*HTSCGTPPGCRAVS
Trigger: AGAAACAGCACGACACCCTGGTGGAGTACCACAAGAAGTATGGCAAGATTTTCCGCATGAAGTTGGGTTCCTTTGAGTCGGTGCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CCA 90 bp GCACCAGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATTGTCTGTaGCCTGGATGTCGTATTTGCGGACAATCCAACAAAGAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: APGCLSVASQQAHCL*PGCRICGQSNKEPN
Trigger: ATTTGGCTCTTTGTTGGATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS CCA 90 bp GCACCAGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATTGTCTGTaGCCTGGATGTCGTATTTGCGGACAATTCCTTTGGGTAAAGCAT +
Preference number: 5 (lower is better)
Translates to: APGCLSVASQQAHCL*PGCRICGQFLWVKH
Trigger: ATGCTTTACCCAAAGGAATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS CCA 90 bp CAAACTCAAATCCAGCCCACCCTTACCGTTTCCACCGCAGCCAGCTaGAGCTCTGTGACAGCAGCATACAATTCTTTCTTTGAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: QTQIQPTLTVSTAAS*SSVTAAYNSFFESR
Trigger: TCGGCTTTCAAAGAAAGAATTGTATGCTGCTGTCACAGAGCTCCAGCTGGCTGCGGTGGAAACGGTAAGGGTGGGCTGGATTTGAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487593.1
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCAGCATTGGTGCCTCCTaGCACTGGCCGCAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTISIGAS*HWPQGL
Trigger: CAGCCCCTGCGGCCAGTGCAAGGAGGCACCAATGCT...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CAA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTTGGTGTTGAGGCTCTaGTGCAGCTCGACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVLVLRL*CSSTGV
Trigger: CACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCATTGGTGTTGAGGCTCTaGTGCAGCTCGACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYALVLRL*CSSTGV
Trigger: CACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAA...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS CCA 90 bp AGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATTGTCTGTGGCCTaGATGTCGTATTTGCGGACAATCCAACAAAGAGCCAAATGCAGT +
Preference number: 5 (lower is better)
Translates to: RVPECSISTGSLSVA*MSYLRTIQQRAKCS
Trigger: ACTGCATTTGGCTCTTTGTTGGATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS-3UTR CAA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTATGGGGTGGGGCGAGGTaGGTACGAGGTGCTAGTGGG +
Preference number: 5 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLWGGAR*VRGASG
Trigger: CCCACTAGCACCTCGTACCAACCTCGCCCCACCCCA...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAATCTCAACAGGCTCATaGTCTGTGGCCTGGATGTCG +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAISTGS*SVAWMS
Trigger: CGACATCCAGGCCACAGACAATGAGCCTGTTGAGAT...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS TCA 90 bp GAACCCTGTAGAATGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTaGGTTGGATATGATGTTAGCAAATACCACCATCTGAGGCGTATT +
Preference number: 5 (lower is better)
Translates to: EPCRMPWIPALSPLP*VGYDVSKYHHLRRI
Trigger: AATACGCCTCAGATGGTGGTATTTGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCATTCTACAGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCAAGCGAGCGGCTCTaGCTGATGGGGGAGCTCATG +
Preference number: 5 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLASERL*LMGELM
Trigger: CATGAGCTCCCCCATCAGCAAGAGCCGCTCGCTTGC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAATTCACCCAGAACTGTaGCCTTGTCAAGAGTCCGAG +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAIHPEL*PCQESE
Trigger: CTCGGACTCTTGACAAGGCAACAGTTCTGGGTGAAT...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCACTAAACTTTGAAACATaGCCCTGCACCACAGATCCT +
Preference number: 5 (lower is better)
Translates to: CLGSQHSVRFPELDMMLALNFET*PCTTDP
Trigger: AGGATCTGTGGTGCAGGGCAATGTTTCAAAGTTTAG...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS TCA 90 bp GAACCCTGTAGAATGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTaGGTTGGATATGATGTTAGCAAATACCACCATCTAGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: EPCRMPWIPALSPLP*VGYDVSKYHHLERQ
Trigger: CTGTCTTTCTAGATGGTGGTATTTGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCATTCTACAGGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460643.1
CDS CCA 90 bp AGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATTGTCTGTGGCCTaGATGTCGTATTTGCGGACAATTCCTTTGGGTAAAGCATATTCA +
Preference number: 5 (lower is better)
Translates to: RVPECSISTGSLSVA*MSYLRTIPLGKAYS
Trigger: TGAATATGCTTTACCCAAAGGAATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAATCTTGCCATACTTCTaGTGGTACTCCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTILPYF*WYSTRV
Trigger: CACCCTGGTGGAGTACCACAAGAAGTATGGCAAGAT...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCAACCTCATTGATTTTGTaGTCCAGCTTCATCACTTCC +
Preference number: 5 (lower is better)
Translates to: CLGSQHSVRFPELDMMLATSLIL*SSFITS
Trigger: GGAAGTGATGAAGCTGGACAACAAAATCAATGAGGT...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCATCGGCCAAGACCTCATaGATTTTGTTGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYASAKTS*ILLSSF
Trigger: GAAGCTGGACAACAAAATCAATGAGGTCTTGGCCGA...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATGGTCCTGCCAGACCTaGGTGTTGAGGCTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTWSCQT*VLRLLC
Trigger: GCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCTGGTCCTGCCAGACCTaGGTGTTGAGGCTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTIWSCQT*VLRLLC
Trigger: GCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCA...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGCCTGGATGTCGTATTaGCGGACAATCCAACAAAGA +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAAWMSY*RTIQQR
Trigger: TCTTTGTTGGATTGTCCGCAAATACGACATCCAGGC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGCCTGGATGTCGTATTaGCGGACAATTCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTAWMSY*RTIPLG
Trigger: ACCCAAAGGAATTGTCCGCAAATACGACATCCAGGC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACATCGGCCAAGACCTCATaGATTTTGTTGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTSAKTS*ILLSSF
Trigger: GAAGCTGGACAACAAAATCAATGAGGTCTTGGCCGA...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACAAGCTTTGACTGATTaGAAAATGGTGTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTQALTD*KMVSQA
Trigger: GGCCTGGGACACCATTTTCAAATCAGTCAAAGCTTG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp CATTCTAAGCACCTGAAGATGGTGCTGACACAGGTGAAGTGTAAACCAGCAGTGTTGCGGACAATTCCTTaGGGTAAAGCATATTCACCC +
Preference number: 5 (lower is better)
Translates to: HSKHLKMVLTQVKCKPAVLRTIP*GKAYSP
Trigger: GGGTGAATATGCTTTACCCAAAGGAATTGTCCGCAA...CACTGCTGGTTTACACTTCACCTGTGTCAGCACCATCTTCAGGTGCTTAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS TCA 90 bp TGGATGTCGTATTTGCGGACAATCCAACAAAGAGCCAAATGCAGTTaGAGCTCTGCTAATCGGCGACCAATGCACATTCTTTTTCCAACG +
Preference number: 5 (lower is better)
Translates to: WMSYLRTIQQRAKCS*SSANRRPMHILFPT
Trigger: CGTTGGAAAAAGAATGTGCATTGGTCGCCGATTAGCAGAGCTTCAACTGCATTTGGCTCTTTGTTGGATTGTCCGCAAATACGACATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS CCA 90 bp TTGATGGCCATGATGAAGTTCACAGCTTCATCCCCTGCATTCTTCTaGAGAAGCCCAAATCTCTTCTCATACAACACGAGGCAGATACTT +
Preference number: 5 (lower is better)
Translates to: LMAMMKFTASSPAFF*RSPNLFSYNTRQIL
Trigger: AAGTATCTGCCTCGTGTTGTATGAGAAGAGATTTGGGCTTCTCCAGAAGAATGCAGGGGATGAAGCTGTGAACTTCATCATGGCCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGTGTCGTGCTGTTTCTaGAGACCCCCTTTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTIVSCCF*RPPFQR
Trigger: TCTCTGGAAAGGGGGTCTCAAGAAACAGCACGACAC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCACTTTCAAACGACCATTaGTTCAGTTCGCTGTACAAG +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYALSNDH*FSSLYK
Trigger: CTTGTACAGCGAACTGAACAAATGGTCGTTTGAAAG...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCAGTGCTCATCATTGTTTaGATGGCCATGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAVLIIV*MAMMKF
Trigger: GAACTTCATCATGGCCATCAAAACAATGATGAGCAC...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp TGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTGAGTTGGATATGATGTTAGCACATACAATTCTTTCTTaGAAAGCCGATTCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: CLGSQHSVRFPELDMMLAHTILS*KADSGD
Trigger: ATCACCAGAATCGGCTTTCAAAGAAAGAATTGTATG...TGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACTTAAGAAGCTTTTGTaGCACTTGGGGATTACGGGA +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTLKKLL*HLGITG
Trigger: TCCCGTAATCCCCAAGTGCAACAAAAGCTTCTTAAG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGGACACACACACACAGACACACACACACATGCATGTCTGTGCTTCATATGCATTCCTTAAGAAGCTTTaGTTGCACTTGGGGATTACG +
Preference number: 5 (lower is better)
Translates to: TDTHTQTHTHMHVCASYAFLKKL*LHLGIT
Trigger: CGTAATCCCCAAGTGCAACAAAAGCTTCTTAAGGAA...TGCATATGAAGCACAGACATGCATGTGTGTGTGTGTCTGTGTGTGTGTGTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS GCA 90 bp CATCATTGTTTTGATGGCCATGATGAAGTTCACAGCTTCATCCCCTaGATTCTTCTGGAGAAGCCCAAATCTCTTCTCATACAACACGAG +
Preference number: 5 (lower is better)
Translates to: HHCFDGHDEVHSFIP*ILLEKPKSLLIQHE
Trigger: CTCGTGTTGTATGAGAAGAGATTTGGGCTTCTCCAGAAGAATGCAGGGGATGAAGCTGTGAACTTCATCATGGCCATCAAAACAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS GCA 90 bp AACAAAGAGCCAAATGCAGTTGAAGCTCTGCTAATCGGCGACCAATaGACATTCTTTTTCCAACGCCAAATGGAAGATGCGCAAAAGGAT +
Preference number: 5 (lower is better)
Translates to: NKEPNAVEALLIGDQ*TFFFQRQMEDAQKD
Trigger: ATCCTTTTGCGCATCTTCCATTTGGCGTTGGAAAAAGAATGTGCATTGGTCGCCGATTAGCAGAGCTTCAACTGCATTTGGCTCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS-3UTR CAA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGATCTTGCCATACTTCTaGTGGTACTCCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRILPYF*WYSTRV
Trigger: CACCCTGGTGGAGTACCACAAGAAGTATGGCAAGAT...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACAGTGCTCATCATTGTTTaGATGGCCATGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTVLIIV*MAMMKF
Trigger: GAACTTCATCATGGCCATCAAAACAATGATGAGCAC...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATCCACATTAGACTGTTaGCTGTCGTTTCCACCGCAG +
Preference number: 5 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTSTLDC*LSFPPQ
Trigger: CTGCGGTGGAAACGACAGCAAACAGTCTAATGTGGA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCCCAGAACTGTTGCCTaGTCAAGAGTCCGAGTTGTA +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTIPRTVA*SRVRVV
Trigger: TACAACTCGGACTCTTGACAAGGCAACAGTTCTGGG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACACCCAGAACTGTTGCCTaGTCAAGAGTCCGAGTTGTA +
Preference number: 5 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTPRTVA*SRVRVV
Trigger: TACAACTCGGACTCTTGACAAGGCAACAGTTCTGGG...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS CCA 90 bp CTTTCAAACGACCATTTGTTCAGTTCGCTGTACAAGTCTTCAACGTaGCCTCTTTCATCACAGAGCTCATCTATTCTGCCCATAAAATCG +
Preference number: 5 (lower is better)
Translates to: LSNDHLFSSLYKSST*PLSSQSSSILPIKS
Trigger: CGATTTTATGGGCAGAATAGATGAGCTCTGTGATGAAAGAGGCCACGTTGAAGACTTGTACAGCGAACTGAACAAATGGTCGTTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS-3UTR CAA 90 bp CTGAGGCAAATTACCATTAGAACCCACACACACATACACGGACACACACACACACTTGAATCTTCAAAATaGTCTTCACTGGATCCCAAC +
Preference number: 5 (lower is better)
Translates to: LRQITIRTHTHIHGHTHTLESSK*SSLDPN
Trigger: GTTGGGATCCAGTGAAGACAATTTTGAAGATTCAAG...TGTGTGTGTGTGTCCGTGTATGTGTGTGTGGGTTCTAATGGTAATTTGCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCTTAAGAAGCTTTTGTaGCACTTGGGGATTACGGGA +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTILKKLL*HLGITG
Trigger: TCCCGTAATCCCCAAGTGCAACAAAAGCTTCTTAAG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGATGAGCACTGTTCCTTaGGGTAAAGCATATTCACCC +
Preference number: 5 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRMSTVP*GKAYSP
Trigger: GGGTGAATATGCTTTACCCAAAGGAACAGTGCTCAT...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS-3UTR CAA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGGTCCGCTTCCCTGAGTaGGATATGATGTTAGCAAAT +
Preference number: 5 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRVRFPE*DMMLAN
Trigger: ATTTGCTAACATCATATCCAACTCAGGGAAGCGGAC...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCGTCCGCTTCCCTGAGTaGGATATGATGTTAGCAAAT +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTIVRFPE*DMMLAN
Trigger: ATTTGCTAACATCATATCCAACTCAGGGAAGCGGAC...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGTTCATGCGGAAAATCTaGCCATACTTCTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRFMRKI*PYFLWY
Trigger: GTACCACAAGAAGTATGGCAAGATTTTCCGCATGAA...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCACCTCATTGATTTTGTaGTCCAGCTTCATCACTTCC +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTITSLIL*SSFITS
Trigger: GGAAGTGATGAAGCTGGACAACAAAATCAATGAGGT...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCTTTCAAACGACCATTaGTTCAGTTCGCTGTACAAG +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTILSNDH*FSSLYK
Trigger: CTTGTACAGCGAACTGAACAAATGGTCGTTTGAAAG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATACTTCTCTAACCGGTaGTCGATACAAGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTYFSNR*SIQALT
Trigger: AGTCAAAGCTTGTATCGACAACCGGTTAGAGAAGTA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp GGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTATTAAGCAGGTACTTCTCTAACCGGTaGTCGATACAAGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: GRPDNFNHHLAWLTLLSRYFSNR*SIQALT
Trigger: AGTCAAAGCTTGTATCGACAACCGGTTAGAGAAGTA...CCTGCTTAATAATGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACATTCCTTAAGAAGCTTTaGTTGCACTTGGGGATTACG +
Preference number: 5 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTFLKKL*LHLGIT
Trigger: CGTAATCCCCAAGTGCAACAAAAGCTTCTTAAGGAA...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTACAGTAAATGGATaGTCAGTATTACTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLATVNG*SVLLPA
Trigger: GGCTGGGAGTAATACTGACAATCCATTTACTGTAGC...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp AATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTATTCATGCGGAAAATCTaGCCATACTTCTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: NAGRTQFHGRPDNFNHHLFMRKI*PYFLWY
Trigger: GTACCACAAGAAGTATGGCAAGATTTTCCGCATGAA...TAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCAAGACCTCATTGATTTaGTTGTCCAGCTTCATCACT +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTIKTSLI*LSSFIT
Trigger: AGTGATGAAGCTGGACAACAAAATCAATGAGGTCTT...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCATTTAGCTTGGCTTACAAAGACCTCATTGATTTaGTTGTCCAGCTTCATCACT +
Preference number: 5 (lower is better)
Translates to: TQFHGRPDNFNHHLAWLTKTSLI*LSSFIT
Trigger: AGTGATGAAGCTGGACAACAAAATCAATGAGGTCTT...TGTAAGCCAAGCTAAATGATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCCATACAATTCTTTCTTaGAAAGCCGATTCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTIHTILS*KADSGD
Trigger: ATCACCAGAATCGGCTTTCAAAGAAAGAATTGTATG...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS-3UTR CAA 90 bp ATTTCAATGCAGGAAGAACGCAATTTCATGGGAGGCCTGATAACTTTAACCATCTTGCATGCTTTACACTaGTCCCATTTAATAGACAGA +
Preference number: 5 (lower is better)
Translates to: ISMQEERNFMGGLITLTILHALH*SHLIDR
Trigger: TCTGTCTATTAAATGGGACAAGTGTAAAGCATGCAA...GATGGTTAAAGTTATCAGGCCTCCCATGAAATTGCGTTCTTCCTGCATTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS TCA 72 bp GCTGCTGCAGGAAGGCGGCAAGCGAGCGGCTCTTGCTaGTGGGGGAGCTCATGGCAGCGGGGGACACCGGAG +
Preference number: 6 (lower is better)
Translates to: AAAGRRQASGSC*WGSSWQRGTPE
Trigger: CTCCGGTGTCCCCCGCTGCCATGAGCTCCCCCATCAGCAAGAGCCGCTCGCTTGCCGCCTTCCTGCAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS GCA 72 bp GTCACCAGTCTCGGGGGCTGCCTCGGACTGCGCAGCTaGTGCAGGAAGGCGGCAAGCGAGCGGCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VTSLGGCLGLRS*CRKAASERLLL
Trigger: CAGCAAGAGCCGCTCGCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCCGAGGCAGCCCCCGAGACTGGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS CAA 90 bp TCGGCGAGGATGCTCGACGCTGCACCACGCGACAGCCTCAGAGCATaGGTGCCTCCTTGCACTGGCCGCAGGGGCTGGAAGAGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SARMLDAAPRDSLRA*VPPCTGRRGWKRVA
Trigger: GGCCACCCTCTTCCAGCCCCTGCGGCCAGTGCAAGGAGGCACCAATGCTCTGAGGCTGTCGCGTGGTGCAGCGTCGAGCATCCTCGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS GCA 72 bp ACCAGTCTCGGGGGCTGCCTCGGACTGCGCAGCTGCTaGAGGAAGGCGGCAAGCGAGCGGCTCTTGCTGATG +
Preference number: 6 (lower is better)
Translates to: TSLGGCLGLRSC*RKAASERLLLM
Trigger: CATCAGCAAGAGCCGCTCGCTTGCCGCCTTCCTGCAGCAGCTGCGCAGTCCGAGGCAGCCCCCGAGACTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS GCA 72 bp TCGACGCTGCACCACGCGACAGCCTCAGAGCATTGGTaGCTCCTTGCACTGGCCGCAGGGGCTGGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: STLHHATASEHW*LLALAAGAGRG
Trigger: CCCTCTTCCAGCCCCTGCGGCCAGTGCAAGGAGGCACCAATGCTCTGAGGCTGTCGCGTGGTGCAGCGTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS CCA 72 bp GTTCTGAGTCTCGCCACCAGCTGTCAGCGGGCAGACTaGCACCTCTCGCGGCTGAGGGGACGTGTACGCCGT +
Preference number: 6 (lower is better)
Translates to: VLSLATSCQRAD*HLSRLRGRVRR
Trigger: ACGGCGTACACGTCCCCTCAGCCGCGAGAGGTGCCAGTCTGCCCGCTGACAGCTGGTGGCGAGACTCAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS TCA 72 bp CCAGCTGTCAGCGGGCAGACTGGCACCTCTCGCGGCTaGGGGGACGTGTACGCCGTAGATGTCACCAGTCTC +
Preference number: 6 (lower is better)
Translates to: PAVSGQTGTSRG*GDVYAVDVTSL
Trigger: GAGACTGGTGACATCTACGGCGTACACGTCCCCTCAGCCGCGAGAGGTGCCAGTCTGCCCGCTGACAGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395955.7
CDS GCA 72 bp GGCAGCAGAAAGGACCTCGGCGAGGATGCTCGACGCTaGACCACGCGACAGCCTCAGAGCATTGGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: GSRKDLGEDARR*TTRQPQSIGAS
Trigger: GGAGGCACCAATGCTCTGAGGCTGTCGCGTGGTGCAGCGTCGAGCATCCTCGCCGAGGTCCTTTCTGCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS CAA 90 bp GCCGTCAGGCTCATCAGGTCTGGCCGCATGCCCAGGTCCCTCGGATaGGACTCACAGGATCAGCAGCCCGTAGCCTTCTTTGCGGTAGTC +
Preference number: 6 (lower is better)
Translates to: AVRLIRSGRMPRSLG*DSQDQQPVAFFAVV
Trigger: GACTACCGCAAAGAAGGCTACGGGCTGCTGATCCTGTGAGTCCAATCCGAGGGACCTGGGCATGCGGCCAGACCTGATGAGCCTGACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472970.1
CDS TCA 72 bp CTTCTTTGCGGTAGTCGCGATAGGCCTTCCACGGTTTaGTCTCCAGCCGCTGCGGGTACGCGCTCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: LLCGSRDRPSTV*SPAAAGTRSRC
Trigger: GCACCGAGAGCGCGTACCCGCAGCGGCTGGAGATCAAACCGTGGAAGGCCTATCGCGACTACCGCAAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CCA 72 bp TCCTCCTGTTGGTCCGCAAGGCTGACCTCTAGGGTCTaGCTGGAGCCACGGGGAGGTGTCAAGGAGGGTAGA +
Preference number: 6 (lower is better)
Translates to: SSCWSARLTSRV*LEPRGGVKEGR
Trigger: TCTACCCTCCTTGACACCTCCCCGTGGCTCCAGCCAGACCCTAGAGGTCAGCCTTGCGGACCAACAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS CCA 72 bp CACCATCTGAGGCGTATTATCGCTGGCAAAACGCGATaGGGAGTTCCCGGCTGGGCACCAGGGTGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: HHLRRIIAGKTR*GVPGWAPGCLS
Trigger: ACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGCGATAATACGCCTCAGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS GCA 72 bp CGGTACAGCGCTTCCAGCAGGCATGGCGAGCCCAGGTaGACCGACTCAAAGGAACCCAACTTCATGCGGAAA +
Preference number: 6 (lower is better)
Translates to: RYSASSRHGEPR*TDSKEPNFMRK
Trigger: TTTCCGCATGAAGTTGGGTTCCTTTGAGTCGGTGCACCTGGGCTCGCCATGCCTGCTGGAAGCGCTGTACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CCA 72 bp TTTGGTCTGAGGCGTATTATCGCTGGCAAAACGCGATaGGGAGTTCCCGGCTGGGCACCAGGGTGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: FGLRRIIAGKTR*GVPGWAPGCLS
Trigger: ACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGCGATAATACGCCTCAGACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460643.1
CDS CCA 72 bp TTCACAATTTCCAGGCGCCGTCAGGCTCATCAGGTCTaGCCGCATGCCCAGGTCCCTCGGATTGGACTCACA +
Preference number: 6 (lower is better)
Translates to: FTISRRRQAHQV*PHAQVPRIGLT
Trigger: TGTGAGTCCAATCCGAGGGACCTGGGCATGCGGCCAGACCTGATGAGCCTGACGGCGCCTGGAAATTGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472970.1
CDS CAA 72 bp TCCCAGGCCAGAGTGTGGTCCTGCCAGACCTTGGTGTaGAGGCTCTTGTGCAGCTCGACTGGAGTGACCATC +
Preference number: 6 (lower is better)
Translates to: SQARVWSCQTLV*RLLCSSTGVTI
Trigger: GATGGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000487593.1
CDS CAA 72 bp ATGGTGTCCCAGGCCAGAGTGTGGTCCTGCCAGACCTaGGTGTTGAGGCTCTTGTGCAGCTCGACTGGAGTG +
Preference number: 6 (lower is better)
Translates to: MVSQARVWSCQT*VLRLLCSSTGV
Trigger: CACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGACACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000487593.1
CDS CAA 90 bp TCCCAGGCCAGAGTGTGGTCCTGCCAGACCTTGGTGTTGAGGCTCTaGTGCAGCTCGACTGGAGTGACCATCATCCTCCCAAACGTGCTC +
Preference number: 6 (lower is better)
Translates to: SQARVWSCQTLVLRL*CSSTGVTIILPNVL
Trigger: GAGCACGTTTGGGAGGATGATGGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS TCA 72 bp ATTCTGGGAAAAGGAAGCAAAGAGGGCCAGCTGGTGTaGTGGAGCGGGGTGAGGCGGGACAGGCAGCAGAAA +
Preference number: 6 (lower is better)
Translates to: ILGKGSKEGQLV*WSGVRRDRQQK
Trigger: TTTCTGCTGCCTGTCCCGCCTCACCCCGCTCCATCACACCAGCTGGCCCTCTTTGCTTCCTTTTCCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216862.8
CDS GCA 72 bp AAAACGCGATGGGGAGTTCCCGGCTGGGCACCAGGGTaGCTGAGTGTAGCATCTCAACAGGCTCATTGTCTG +
Preference number: 6 (lower is better)
Translates to: KTRWGVPGWAPG*LSVASQQAHCL
Trigger: CAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000460643.1
CDS CCA 72 bp ATTATCGCTGGCAAAACGCGATGGGGAGTTCCCGGCTaGGCACCAGGGTGCCTGAGTGTAGCATCTCAACAG +
Preference number: 6 (lower is better)
Translates to: IIAGKTRWGVPG*APGCLSVASQQ
Trigger: CTGTTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCCGGGAACTCCCCATCGCGTTTTGCCAGCGATAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000460643.1
CDS CAA 90 bp AAAATGGTGTCCCAGGCCAGAGTGTGGTCCTGCCAGACCTTGGTGTaGAGGCTCTTGTGCAGCTCGACTGGAGTGACCATCATCCTCCCA +
Preference number: 6 (lower is better)
Translates to: KMVSQARVWSCQTLV*RLLCSSTGVTIILP
Trigger: TGGGAGGATGATGGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGACACCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS GCA 72 bp GTGTGGTCCTGCCAGACCTTGGTGTTGAGGCTCTTGTaGAGCTCGACTGGAGTGACCATCATCCTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: VWSCQTLVLRLL*SSTGVTIILPN
Trigger: GTTTGGGAGGATGATGGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS CAA 72 bp AGAGTGTGGTCCTGCCAGACCTTGGTGTTGAGGCTCTaGTGCAGCTCGACTGGAGTGACCATCATCCTCCCA +
Preference number: 6 (lower is better)
Translates to: RVWSCQTLVLRL*CSSTGVTIILP
Trigger: TGGGAGGATGATGGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS CAA 90 bp CGGCTGGGCACCAGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATaGTCTGTGGCCTGGATGTCGTATTTGCGGACAATTCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: RLGTRVPECSISTGS*SVAWMSYLRTIPLG
Trigger: ACCCAAAGGAATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS GCA 72 bp GATTTGAAAATGGTGTCCCAGGCCAGAGTGTGGTCCTaGCAGACCTTGGTGTTGAGGCTCTTGTGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: DLKMVSQARVWS*QTLVLRLLCSS
Trigger: CGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGACACCATTTTCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000487593.1
CDS CAA 90 bp GATTTGAAAATGGTGTCCCAGGCCAGAGTGTGGTCCTGCCAGACCTaGGTGTTGAGGCTCTTGTGCAGCTCGACTGGAGTGACCATCATC +
Preference number: 6 (lower is better)
Translates to: DLKMVSQARVWSCQT*VLRLLCSSTGVTII
Trigger: GATGATGGTCACTCCAGTCGAGCTGCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGACACCATTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000487593.1
CDS CAA 90 bp CGGCTGGGCACCAGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATaGTCTGTGGCCTGGATGTCGTATTTGCGGACAATCCAACAAAGA +
Preference number: 6 (lower is better)
Translates to: RLGTRVPECSISTGS*SVAWMSYLRTIQQR
Trigger: TCTTTGTTGGATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGTGCCCAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS CCA 72 bp TTGACTGATTTGAAAATGGTGTCCCAGGCCAGAGTGTaGTCCTGCCAGACCTTGGTGTTGAGGCTCTTGTGC +
Preference number: 6 (lower is better)
Translates to: LTDLKMVSQARV*SCQTLVLRLLC
Trigger: GCACAAGAGCCTCAACACCAAGGTCTGGCAGGACCACACTCTGGCCTGGGACACCATTTTCAAATCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
ENST00000487593.1
CDS CAA 72 bp ACCAGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATaGTCTGTGGCCTGGATGTCGTATTTGCGGACAATC +
Preference number: 6 (lower is better)
Translates to: TRVPECSISTGS*SVAWMSYLRTI
Trigger: GATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000460643.1
CDS CAA 90 bp CCCAGGTGCACCGACTCAAAGGAACCCAACTTCATGCGGAAAATCTaGCCATACTTCTTGTGGTACTCCACCAGGGTGTCGTGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: PRCTDSKEPNFMRKI*PYFLWYSTRVSCCF
Trigger: GAAACAGCACGACACCCTGGTGGAGTACCACAAGAAGTATGGCAAGATTTTCCGCATGAAGTTGGGTTCCTTTGAGTCGGTGCACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CAA 72 bp ACCAGGGTGCCTGAGTGTAGCATCTCAACAGGCTCATaGTCTGTGGCCTGGATGTCGTATTTGCGGACAATT +
Preference number: 6 (lower is better)
Translates to: TRVPECSISTGS*SVAWMSYLRTI
Trigger: AATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTCAGGCACCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS GCA 72 bp CCGACTCAAAGGAACCCAACTTCATGCGGAAAATCTTaGCATACTTCTTGTGGTACTCCACCAGGGTGTCGT +
Preference number: 6 (lower is better)
Translates to: PTQRNPTSCGKS*HTSCGTPPGCR
Trigger: ACGACACCCTGGTGGAGTACCACAAGAAGTATGGCAAGATTTTCCGCATGAAGTTGGGTTCCTTTGAGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CCA 72 bp GAGTGTAGCATCTCAACAGGCTCATTGTCTGTGGCCTaGATGTCGTATTTGCGGACAATCCAACAAAGAGCC +
Preference number: 6 (lower is better)
Translates to: ECSISTGSLSVA*MSYLRTIQQRA
Trigger: GGCTCTTTGTTGGATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS CAA 72 bp ACCGACTCAAAGGAACCCAACTTCATGCGGAAAATCTaGCCATACTTCTTGTGGTACTCCACCAGGGTGTCG +
Preference number: 6 (lower is better)
Translates to: TDSKEPNFMRKI*PYFLWYSTRVS
Trigger: CGACACCCTGGTGGAGTACCACAAGAAGTATGGCAAGATTTTCCGCATGAAGTTGGGTTCCTTTGAGTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS CAA 72 bp GAACCCAACTTCATGCGGAAAATCTTGCCATACTTCTaGTGGTACTCCACCAGGGTGTCGTGCTGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: EPNFMRKILPYF*WYSTRVSCCFL
Trigger: CAAGAAACAGCACGACACCCTGGTGGAGTACCACAAGAAGTATGGCAAGATTTTCCGCATGAAGTTGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395955.7
ENST00000472970.1
CDS TCA 72 bp AGAATGCCTTGGATCCCAGCACTCAGTCCGCTTCCCTaGGTTGGATATGATGTTAGCAAATACCACCATCTA +
Preference number: 6 (lower is better)
Translates to: RMPWIPALSPLP*VGYDVSKYHHL
Trigger: TAGATGGTGGTATTTGCTAACATCATATCCAACTCAGGGAAGCGGACTGAGTGCTGGGATCCAAGGCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460643.1
CDS GCA 72 bp CCAAATGCAGTTGAAGCTCTGCTAATCGGCGACCAATaGACATTCTTTTTCCAACGCCAAATGGAAGATGCG +
Preference number: 6 (lower is better)
Translates to: PNAVEALLIGDQ*TFFFQRQMEDA
Trigger: CGCATCTTCCATTTGGCGTTGGAAAAAGAATGTGCATTGGTCGCCGATTAGCAGAGCTTCAACTGCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS CCA 72 bp ATTAGACTGTTTGCTGTCGTTTCCACCGCAGCCAGCTaGAGCTCTGTGACAGCAGCATACAATTCTTTCTTT +
Preference number: 6 (lower is better)
Translates to: IRLFAVVSTAAS*SSVTAAYNSFF
Trigger: AAAGAAAGAATTGTATGCTGCTGTCACAGAGCTCCAGCTGGCTGCGGTGGAAACGACAGCAAACAGTCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS CCA 72 bp GAGTGTAGCATCTCAACAGGCTCATTGTCTGTGGCCTaGATGTCGTATTTGCGGACAATTCCTTTGGGTAAA +
Preference number: 6 (lower is better)
Translates to: ECSISTGSLSVA*MSYLRTIPLGK
Trigger: TTTACCCAAAGGAATTGTCCGCAAATACGACATCCAGGCCACAGACAATGAGCCTGTTGAGATGCTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395955.7
CDS CCA 72 bp CAGAACTGTTGCCTTGTCAAGAGTCCGAGTTGTAAATaGTACACTCGGCGTAAGCCTCATAGATTCTTTCAG +
Preference number: 6 (lower is better)
Translates to: QNCCLVKSPSCK*YTRRKPHRFFQ
Trigger: CTGAAAGAATCTATGAGGCTTACGCCGAGTGTACCATTTACAACTCGGACTCTTGACAAGGCAACAGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS TCA 72 bp TATTTGCGGACAATCCAACAAAGAGCCAAATGCAGTTaGAGCTCTGCTAATCGGCGACCAATGCACATTCTT +
Preference number: 6 (lower is better)
Translates to: YLRTIQQRAKCS*SSANRRPMHIL
Trigger: AAGAATGTGCATTGGTCGCCGATTAGCAGAGCTTCAACTGCATTTGGCTCTTTGTTGGATTGTCCGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3
CDS GCA 72 bp TTTGATGGCCATGATGAAGTTCACAGCTTCATCCCCTaGATTCTTCTGGAGAAGCCCAAATCTCTTCTCATA +
Preference number: 6 (lower is better)
Translates to: FDGHDEVHSFIP*ILLEKPKSLLI
Trigger: TATGAGAAGAGATTTGGGCTTCTCCAGAAGAATGCAGGGGATGAAGCTGTGAACTTCATCATGGCCATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS CAA 72 bp TCATACAACACGAGGCAGATACTTTCAAACGACCATTaGTTCAGTTCGCTGTACAAGTCTTCAACGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SYNTRQILSNDH*FSSLYKSSTWP
Trigger: AGGCCACGTTGAAGACTTGTACAGCGAACTGAACAAATGGTCGTTTGAAAGTATCTGCCTCGTGTTGTATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216862.8
ENST00000395954.3
ENST00000395955.7
CDS CCA 72 bp GAATCTTCAAAATTGTCTTCACTGGATCCCAACACCTaGGTATTTAGCATGAGCACTGTTCCTTTGGGTAAA +
Preference number: 6 (lower is better)
Translates to: ESSKLSSLDPNT*VFSMSTVPLGK
Trigger: TTTACCCAAAGGAACAGTGCTCATGCTAAATACCCAGGTGTTGGGATCCAGTGAAGACAATTTTGAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216862.8
ENST00000395954.3