Pregenerated sensors for CYLC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000183035Ensembl transcript IDs: ENST00000329312.5, ENST00000621735.4
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCCCCTGCCTGTACGTTaGCTGGACTTGAGCATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKPLPVR*LDLSIV Trigger: TACTATGCTCAAGTCCAGGCAACGTACAGGCAGGGG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621735.4 |
||
| CDS-3UTR GCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGAAGAGACATTTCCCCTaGCTGTACGTTGCCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKKRHFP*LYVAWT Trigger: AGTCCAGGCAACGTACAGGCAGGGGAAATGTCTCTT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGATGGAGTCTGTTCCCTaGCAGCTGTGTAAATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKMESVP*QLCKWV Trigger: CACCCATTTACACAGCTGCCAGGGAACAGACTCCAT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTCTTGGTTTTGGAGGTaGAGGAGGCATCTTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSWFWR*RRHLAP Trigger: TGGTGCAAGATGCCTCCTCCACCTCCAAAACCAAGA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGACCAACAAAGACGTCTaGCCTTTGGTGATGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKTNKDV*PLVMVE Trigger: CTCTACCATCACCAAAGGTCAGACGTCTTTGTTGGT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGGTAAGGCCATTCTGTaGAACCAAGTGCTCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKGKAIL*NQVLSC Trigger: ACAACTGAGCACTTGGTTTCACAGAATGGCCTTACC...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTGGTGGTTTTTCTCTTaGTGGAGGAACTCTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKWWFFS*WRNSTC Trigger: ACAGGTAGAGTTCCTCCATCAAGAGAAAAACCACCA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR GCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCTTATGAATCCACGGTaGTTCAGGCAAAGGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKLMNPR*FRQRSI Trigger: TATGCTCCTTTGCCTGAAGCACCGTGGATTCATAAG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTGTACCTCTCTGGAGTaGTTTGGGAAATGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKCTSLE*FGKCQS Trigger: GCTTTGACATTTCCCAAACCACTCCAGAGAGGTACA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGATAAAGATGTCTGAATaGAGTCTGTTCCCTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKIKMSE*SLFPGS Trigger: GCTGCCAGGGAACAGACTCCATTCAGACATCTTTAT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGAGCATATCTTGGTTTTaGAGGTGGAGGAGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSISWF*RWRRHL Trigger: AAGATGCCTCCTCCACCTCCAAAACCAAGATATGCT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGAAGTATAAAGATGTCTaGATGGAGTCTGTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKKYKDV*MESVPW Trigger: CCAGGGAACAGACTCCATTCAGACATCTTTATACTT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTTTCTGACTCTCCTTTaGCTCCAGTTCAGATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKFLTLL*LQFRFR Trigger: TCTGAATCTGAACTGGAGTCAAAGGAGAGTCAGAAA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCTCTCTGGAGTGGTTTaGGAAATGTCAAAGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKLSGVV*EMSKQS Trigger: ACTTTGCTTTGACATTTCCCAAACCACTCCAGAGAG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTCATTTGTACCTCTCTaGAGTGGTTTGGGAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSFVPL*SGLGNV Trigger: GACATTTCCCAAACCACTCCAGAGAGGTACAAATGA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTGGCAGCTGTGTAAATaGGTGGCCATTGCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKWQLCK*VAIAKF Trigger: AAATTTTGCAATGGCCACCCATTTACACAGCTGCCA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR GCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCTTATGAATCCACGGTaGTTCAGGAGTAACTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKLMNPR*FRSNCY Trigger: ATAACAGTTACTCCTGAAGCACCGTGGATTCATAAG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621735.4 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGAGTATCAGTAGACTCTaGGTACTTCTTTGTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSISRL*VLLCVL Trigger: AAGGACACAAAGAAGTACCCAGAGTCTACTGATACT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTGCAGATGTGCCATCTaGTTCATCAATTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKCRCAI*FINFLL Trigger: AAGAAGAAAATTGATGAATCAGATGGCACATCTGCA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTTTTGGATGACATTCTaGATCCTCTCTTTGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKFWMTF*ILSLIP Trigger: TGGAATCAAAGAGAGGATTCAGAATGTCATCCAAAA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGAGCTGTGTAAATGGGTaGCCATTGCAAAATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSCVNG*PLQNFS Trigger: AGAAAAATTTTGCAATGGCCACCCATTTACACAGCT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS TCA 90 bp | TTGGTTTTGGAGGTGGAGGAGGCATCTTGCACCAACAAAGACGTCTaGCCTTTGGTGATGGTAGAGAAGGCTCACAAGCAGGGAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLEVEEASCTNKDV*PLVMVEKAHKQGVV Trigger: CACCACTCCCTGCTTGTGAGCCTTCTCTACCATCACCAAAGGTCAGACGTCTTTGTTGGTGCAAGATGCCTCCTCCACCTCCAAAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTCCCCTGCCTGTACGTaGCCTGGACTTGAGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSPACT*PGLEHS Trigger: ACTATGCTCAAGTCCAGGCAACGTACAGGCAGGGGA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGGTGGAGGAGGCATCTaGCACCAACAAAGACGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKGGGGI*HQQRRL Trigger: CAGACGTCTTTGTTGGTGCAAGATGCCTCCTCCACC...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGAGCATATCTTGGTTTaGGAGGTGGAGGAGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKEHILV*EVEEAS Trigger: AGATGCCTCCTCCACCTCCAAAACCAAGATATGCTC...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCCTCTCTGGAGTGGTTaGGGAAATGTCAAAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKPLWSG*GNVKAK Trigger: CTTTGCTTTGACATTTCCCAAACCACTCCAGAGAGG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGTGGTGGTTTTTCTCTaGATGGAGGAACTCTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKVVVFL*MEELYL Trigger: CAGGTAGAGTTCCTCCATCAAGAGAAAAACCACCAC...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCCAGTCCTTCCATCTTaGAATTTGCAGATGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKPVLPS*NLQMCH Trigger: ATGGCACATCTGCAAATTCAAAGATGGAAGGACTGG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGGTAGAAATGCTCATTaGAGAGTAGGTGGTGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKGRNAH*RVGGAY Trigger: GTAAGCACCACCTACTCTCAAATGAGCATTTCTACC...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS TCA 90 bp | GTTCCCTGGCAGCTGTGTAAATGGGTGGCCATTGCAAAATTTTTCTaGAAGAATGCCTTATCCATTTATGAGCTGGTTTCTGGCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPWQLCKWVAIAKFF*KNALSIYELVSGLL Trigger: AAGAAGGCCAGAAACCAGCTCATAAATGGATAAGGCATTCTTTCAGAAAAATTTTGCAATGGCCACCCATTTACACAGCTGCCAGGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS TCA 90 bp | GCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGCCATTCTGTaGAACCAAGTGCTCAGTTGTTCTTTAAAGCAGCTTATGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHLRVGGAYCGKAIL*NQVLSCSLKQLMNP Trigger: TGGATTCATAAGCTGCTTTAAAGAACAACTGAGCACTTGGTTTCACAGAATGGCCTTACCACAGTAAGCACCACCTACTCTCAAATGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTTACTTTTAGCAACCTaGGAAGAGACATTTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKLLLAT*EETFPL Trigger: CAGGGGAAATGTCTCTTCCAAGGTTGCTAAAAGTAA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCCTTTTTACCCTTTTTaGAATCTCCCTTCGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKPFYPF*NLPSVQ Trigger: CTGAACCGAAGGGAGATTCAAAAAAGGGTAAAAAGG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTGTTTACTTTTAGCCTaGGAAGAGACATTTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKCLLLA*EETFPL Trigger: CAGGGGAAATGTCTCTTCCAAGGCTAAAAGTAAACA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621735.4 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGTCTTGATTTATCATTaGTACCTCTCTGGAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKVLIYH*YLSGVV Trigger: AACCACTCCAGAGAGGTACAAATGATAAATCAAGAC...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCATTTCTTGCATCCTTaGCATCTCCTGATTCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKHFLHP*HLLIQY Trigger: ATACTGAATCAGGAGATGCAAAGGATGCAAGAAATG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTTCTTGAATCATTTCTaGCATCCTTTGCATCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKFLNHF*HPLHLL Trigger: CAGGAGATGCAAAGGATGCAAGAAATGATTCAAGAA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGCTTCCATCTTTGAATTaGCAGATGTGCCATCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKLPSLN*QMCHLI Trigger: AATCAGATGGCACATCTGCAAATTCAAAGATGGAAG...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CCA 90 bp | AAGATGTCTGAATGGAGTCTGTTCCCTGGCAGCTGTGTAAATGGGTaGCCATTGCAAAATTTTTCTGAAAGAATGCCTTATCCATTTATG | + |
|
Preference number: 5 (lower is better) Translates to: KMSEWSLFPGSCVNG*PLQNFSERMPYPFM Trigger: CATAAATGGATAAGGCATTCTTTCAGAAAAATTTTGCAATGGCCACCCATTTACACAGCTGCCAGGGAACAGACTCCATTCAGACATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTGGATTCTGGATTTGTaGCATATGAACCTCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKWILDL*HMNLLF Trigger: AAAAAGGAGGTTCATATGCAACAAATCCAGAATCCA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTCTTCTACTATTTGCTaGGATTCTGGATTTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSSTIC*DSGFVA Trigger: TGCAACAAATCCAGAATCCAAGCAAATAGTAGAAGA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGGACTGTCTTAGAATTTaGGGATTCTGGATTAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKDCLRI*GFWISF Trigger: GAAACTAATCCAGAATCCCAAAATTCTAAGACAGTC...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGTCCTTTGAGTGTTTCTaGTCCTTCTTTAACTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKSFECF*SFFNSK Trigger: TTTGGAGTTAAAGAAGGACAAGAAACACTCAAAGGA...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAGGTAGAAATGCTCATTTGAGAGTAGGTGGTGCTTACTGTGGTAAGAAACCAAGTGCTCAGTaGTTCTTTAAAGCAGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FHRGRNAHLRVGGAYCGKKPSAQ*FFKAAY Trigger: ATAAGCTGCTTTAAAGAACAACTGAGCACTTGGTTT...CTTACCACAGTAAGCACCACCTACTCTCAAATGAGCATTTCTACCTCTGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS TCA 72 bp | GAGGTGGAGGAGGCATCTTGCACCAACAAAGACGTCTaGCCTTTGGTGATGGTAGAGAAGGCTCACAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVEEASCTNKDV*PLVMVEKAHKQ Trigger: CTGCTTGTGAGCCTTCTCTACCATCACCAAAGGTCAGACGTCTTTGTTGGTGCAAGATGCCTCCTCCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CCA 72 bp | CCACGGTGCTTCAGGCAAAGGAGCATATCTTGGTTTTaGAGGTGGAGGAGGCATCTTGCACCAACAAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: PRCFRQRSISWF*RWRRHLAPTKT Trigger: CGTCTTTGTTGGTGCAAGATGCCTCCTCCACCTCCAAAACCAAGATATGCTCCTTTGCCTGAAGCACCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CAA 90 bp | TCAGGCAAAGGAGCATATCTTGGTTTTGGAGGTGGAGGAGGCATCTaGCACCAACAAAGACGTCTGACCTTTGGTGATGGTAGAGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGKGAYLGFGGGGGI*HQQRRLTFGDGREG Trigger: GCCTTCTCTACCATCACCAAAGGTCAGACGTCTTTGTTGGTGCAAGATGCCTCCTCCACCTCCAAAACCAAGATATGCTCCTTTGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CCA 72 bp | TGCTTCAGGCAAAGGAGCATATCTTGGTTTTGGAGGTaGAGGAGGCATCTTGCACCAACAAAGACGTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CFRQRSISWFWR*RRHLAPTKTSD Trigger: GTCAGACGTCTTTGTTGGTGCAAGATGCCTCCTCCACCTCCAAAACCAAGATATGCTCCTTTGCCTGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CAA 72 bp | GGAGCATATCTTGGTTTTGGAGGTGGAGGAGGCATCTaGCACCAACAAAGACGTCTGACCTTTGGTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GAYLGFGGGGGI*HQQRRLTFGDG Trigger: ACCATCACCAAAGGTCAGACGTCTTTGTTGGTGCAAGATGCCTCCTCCACCTCCAAAACCAAGATATGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS TCA 72 bp | AGAAGGCTCACAAGCAGGGAGTGGTGGTTTTTCTCTTaGTGGAGGAACTCTACCTGTACTTGCTTTTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRLTSREWWFFS*WRNSTCTCFFP Trigger: GGGGAAAAAGCAAGTACAGGTAGAGTTCCTCCATCAAGAGAAAAACCACCACTCCCTGCTTGTGAGCCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CAA 72 bp | GAGAAGGCTCACAAGCAGGGAGTGGTGGTTTTTCTCTaGATGGAGGAACTCTACCTGTACTTGCTTTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EKAHKQGVVVFL*MEELYLYLLFP Trigger: GGGAAAAAGCAAGTACAGGTAGAGTTCCTCCATCAAGAGAAAAACCACCACTCCCTGCTTGTGAGCCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CAA 72 bp | TTTAGCCTTGGAAGAGACATTTCCCCTGCCTGTACGTaGCCTGGACTTGAGCATAGTAAGTTGAAACTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FSLGRDISPACT*PGLEHSKLKLV Trigger: TACCAGTTTCAACTTACTATGCTCAAGTCCAGGCAACGTACAGGCAGGGGAAATGTCTCTTCCAAGGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621735.4 |
||
| CDS TCA 72 bp | AGAGTAGGTGGTGCTTACTGTGGTAAGGCCATTCTGTaGAACCAAGTGCTCAGTTGTTCTTTAAAGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RVGGAYCGKAIL*NQVLSCSLKQL Trigger: AAGCTGCTTTAAAGAACAACTGAGCACTTGGTTTCACAGAATGGCCTTACCACAGTAAGCACCACCTACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329312.5 ENST00000621735.4 |
||
| CDS CCA 72 bp | GAATGGAGTCTGTTCCCTGGCAGCTGTGTAAATGGGTaGCCATTGCAAAATTTTTCTGAAAGAATGCCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: EWSLFPGSCVNG*PLQNFSERMPY Trigger: ATAAGGCATTCTTTCAGAAAAATTTTGCAATGGCCACCCATTTACACAGCTGCCAGGGAACAGACTCCATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS TCA 72 bp | CAGCTGTGTAAATGGGTGGCCATTGCAAAATTTTTCTaGAAGAATGCCTTATCCATTTATGAGCTGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QLCKWVAIAKFF*KNALSIYELVS Trigger: AGAAACCAGCTCATAAATGGATAAGGCATTCTTTCAGAAAAATTTTGCAATGGCCACCCATTTACACAGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||
| CDS CAA 72 bp | ATCCTCTCTTTGATTCCAGTCCTTCCATCTTTGAATTaGCAGATGTGCCATCTGATTCATCAATTTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILSLIPVLPSLN*QMCHLIHQFSS Trigger: AGAAGAAAATTGATGAATCAGATGGCACATCTGCAAATTCAAAGATGGAAGGACTGGAATCAAAGAGAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329312.5 |
||