RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYBB (Homo sapiens)

Ensembl gene IDs: ENSG00000165168

Ensembl transcript IDs: ENST00000378588.5, ENST00000492288.1

Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACATTAACTCCAATCAATCCAATATTCTTCTGTAGAAAGAACATCTaGCCCAGTTACCCTGCTGTATTAGTAAACTGGAGTATGCTCAGA +
Preference number: 1 (lower is better)
Translates to: TLTPINPIFFCRKNI*PSYPAVLVNWSMLR
Trigger: TCTGAGCATACTCCAGTTTACTAATACAGCAGGGTAACTGGGCCAGATGTTCTTTCTACAGAAGAATATTGGATTGATTGGAGTTAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR TCA 90 bp GCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTGCCCTGAGGTCAATTAGCATTATTTaGGCATTTGGCAGCACAACC +
Preference number: 2 (lower is better)
Translates to: AIFAQQALFVRPTLSALRSISII*AFGSTT
Trigger: GGTTGTGCTGCCAAATGCTCAAATAATGCTAATTGA...CCTCAGGGCACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR TCA 90 bp CAATTCCTAAGTTCAATATTCATAAGGGCTAGCTGGAGAAGACCACTTTGGGCAAGGAGCAGGACTAGATaGGCCAGAGTCATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QFLSSIFIRASWRRPLWARSRTR*ARVMAG
Trigger: TCCTGCCATGACTCTGGCTCATCTAGTCCTGCTCCT...TGCCCAAAGTGGTCTTCTCCAGCTAGCCCTTATGAATATTGAACTTAGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAACTGGTGGCTGGCAGCTaGTGGCTTGAGAGAATAAAA +
Preference number: 2 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKLVAGS*WLERIK
Trigger: TTTTATTCTCTCAAGCCACCAGCTGCCAGCCACCAG...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR TCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTTAACAAAACTTACTTaGGTATCCGCTCTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQLTKLT*VSALCQ
Trigger: TTGGCAGAGAGCGGATACTCAAGTAAGTTTTGTTAA...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATTTCATCCTAGTCCCTTaGATAATCCCCCTCAGCATC +
Preference number: 2 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHFILVP*IIPLSI
Trigger: GATGCTGAGGGGGATTATTCAAGGGACTAGGATGAA...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR CAA 90 bp TTCATGCTTCAAATAAGAATGTGCAGAACCCTTCAGGCAATCCTATaGGTTAGTATCCTTAGCCTGTTCTTGACCCTAGGGAGAATCAGA +
Preference number: 2 (lower is better)
Translates to: FMLQIRMCRTLQAIL*VSILSLFLTLGRIR
Trigger: TCTGATTCTCCCTAGGGTCAAGAACAGGCTAAGGATACTAACCAATAGGATTGCCTGAAGGGTTCTGCACATTCTTATTTGAAGCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAAGCAGAAACCATCCTaGTACATTTCAGAAAGGCTA +
Preference number: 2 (lower is better)
Translates to: YLPGPPLELFTYKACKYSKQKPS*YISERL
Trigger: TAGCCTTTCTGAAATGTACCAGGATGGTTTCTGCTT...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp AGTTCTTATTTAGTTCATCCTAGTCCCTTGAATAATCCCCCTCAGCATCAAAATGATGAGCCAGAGTCATaGCAGGAGGTTAATTCTCCA +
Preference number: 2 (lower is better)
Translates to: SSYLVHPSPLNNPPQHQNDEPES*QEVNSP
Trigger: TGGAGAATTAACCTCCTGCCATGACTCTGGCTCATC...ATTTTGATGCTGAGGGGGATTATTCAAGGGACTAGGATGAACTAAATAAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp AGTTCTTATTTAGTTCATCCTAGTCCCTTGAATAATCCCCCTCAGCATCAAAATGGCAGCTCAGTATTGTaGAAAGAGTATCAAACCTGG +
Preference number: 2 (lower is better)
Translates to: SSYLVHPSPLNNPPQHQNGSSVL*KEYQTW
Trigger: CCAGGTTTGATACTCTTTCCACAATACTGAGCTGCC...ATTTTGATGCTGAGGGGGATTATTCAAGGGACTAGGATGAACTAAATAAGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp CAATTCCTAAGTTCAATATTCATAAGGGCTAGCTGGAGAAGACCACTTTGGGCATATATAGCTACTCCTTaGTTTCCTTCTTCTTTTGGG +
Preference number: 2 (lower is better)
Translates to: QFLSSIFIRASWRRPLWAYIATP*FPSSFG
Trigger: CCCAAAAGAAGAAGGAAACCAAGGAGTAGCTATATA...TGCCCAAAGTGGTCTTCTCCAGCTAGCCCTTATGAATATTGAACTTAGGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp AGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTATGTAGAAAGAACATCTaGCCCAGTTACCCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: RNTLGATNEAGFNYAHRLCRKNI*PSYPAV
Trigger: TACAGCAGGGTAACTGGGCCAGATGTTCTTTCTACA...TAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTTTCATAAGGGCTAGCTaGAGAAGACCACTTTGGGCA +
Preference number: 2 (lower is better)
Translates to: ATNEAGFNYAHRLERANIFIRAS*RRPLWA
Trigger: TGCCCAAAGTGGTCTTCTCCAGCTAGCCCTTATGAA...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAAAACCTGGAGTAAGATaGGCTAGATCTGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKKPGVR*ARSGHS
Trigger: ACTGTGACCAGATCTAGCCCATCTTACTCCAGGTTT...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATGCTGTATTAGTAAACTaGAGTATGCTCAGATGTCAA +
Preference number: 2 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHAVLVN*SMLRCQ
Trigger: TTGACATCTGAGCATACTCCAGTTTACTAATACAGC...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR TCA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGAGTCACTAATAAGTGTTaGGACACTCTCAACATGTAT +
Preference number: 2 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRVTNKC*DTLNMY
Trigger: ATACATGTTGAGAGTGTCTCAACACTTATTAGTGAC...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR GCA 90 bp AGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTACTTCAAATAAGAATGTaGAGAACCCTTCAGGCAATC +
Preference number: 2 (lower is better)
Translates to: RNTLGATNEAGFNYAHRLLQIRM*RTLQAI
Trigger: GATTGCCTGAAGGGTTCTGCACATTCTTATTTGAAG...TAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGATTCAGGCAATCCTATTaGTTAGTATCCTTAGCCTGT +
Preference number: 2 (lower is better)
Translates to: NEAGFNYAHRLERANILRFRQSY*LVSLAC
Trigger: ACAGGCTAAGGATACTAACCAATAGGATTGCCTGAA...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CCA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCATTATTTGAGCATTTaGCAGCACAACCCACATTTA +
Preference number: 2 (lower is better)
Translates to: ATNEAGFNYAHRLERANIHYLSI*QHNPHL
Trigger: TAAATGTGGGTTGTGCTGCCAAATGCTCAAATAATG...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CAA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCACACAGCAGGCCTTATTaGTCAGACCTACCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: YLPGPPLELFTYKACKYSHSRPY*SDLPSV
Trigger: CACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTG...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CAA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAACTGGAGAAGACCACTTaGGGCAGGAAATTAGTCTGC +
Preference number: 3 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKLEKTT*GRKLVC
Trigger: GCAGACTAATTTCCTGCCCAAAGTGGTCTTCTCCAG...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CAA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATCTTCAGGCAATCCTATaGGTTAGTATCCTTAGCCTG +
Preference number: 3 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHLQAIL*VSILSL
Trigger: CAGGCTAAGGATACTAACCAATAGGATTGCCTGAAG...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR TCA 72 bp GTTAGAAAGGGCCAATATTCTCAGACTCCTTATAACTaGGGTACCCTCTCCAGTTCATACTTTGGTGTAAAG +
Preference number: 3 (lower is better)
Translates to: VRKGQYSQTPYN*GTLSSSYFGVK
Trigger: CTTTACACCAAAGTATGAACTGGAGAGGGTACCTCAGTTATAAGGAGTCTGAGAATATTGGCCCTTTCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CAA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTAAGAGTTCTAAACATTaGTGGCTCCAAGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: ATNEAGFNYAHRLERANIKSSKH*WLQGVG
Trigger: CCCCACCCCTTGGAGCCACAAATGTTTAGAACTCTT...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR CCA 72 bp TTTCATAACTTAGTTGGTTTTGAAGATAGAAAACCTTaGAGAAACACTCTCGGAGCAACAAATGAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: FHNLVGFEDRKP*RNTLGATNEAG
Trigger: ACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGGTTTTCTATCTTCAAAACCAACTAAGTTATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CAA 90 bp AGTTCTTATTTAGTTCATCCTAGTCCCTTGAATAATCCCCCTCAGCATCAAAATATATATAGCTACTCCTaGGTTTCCTTCTTCTTTTGG +
Preference number: 3 (lower is better)
Translates to: SSYLVHPSPLNNPPQHQNIYSYS*VSFFFW
Trigger: CCAAAAGAAGAAGGAAACCAAGGAGTAGCTATATAT...ATTTTGATGCTGAGGGGGATTATTCAAGGGACTAGGATGAACTAAATAAGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR-3UTR CAA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAGAGAATCAGATTCCTTaGGTCTATGACAGTAATAGA +
Preference number: 3 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKENQIP*VYDSNR
Trigger: TCTATTACTGTCATAGACCAAAGGAATCTGATTCTC...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR TCA 72 bp GTATGCTCAGATGTCAATACTGTCACTAATAAGTGTTaGGACACTCTCAACATGTATTATGTCCTAATGATC +
Preference number: 3 (lower is better)
Translates to: VCSDVNTVTNKC*DTLNMYYVLMI
Trigger: GATCATTAGGACATAATACATGTTGAGAGTGTCTCAACACTTATTAGTGACAGTATTGACATCTGAGCATAC
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp GCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTGCCCTGAGGCCTAAACCAGTCTTCTaGCCTTCCCCCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AIFAQQALFVRPTLSALRPKPVF*PSPSSF
Trigger: GAAAGAGCTGGGGGAAGGGCAGAAGACTGGTTTAGG...CCTCAGGGCACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAATGGATGCGAAGGGTGTaGCCCCAATCCCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKWMRRV*PQSLLP
Trigger: TGGGAGCAGGGATTGGGGTCACACCCTTCGCATCCA...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGATGACCACCTTCTGTTaGGATCGCCAAAACCGCACC +
Preference number: 4 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQMTTFC*DRQNRT
Trigger: GGTGCGGTTTTGGCGATCTCAACAGAAGGTGGTCAT...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAGGAGCAGGACTAGATaGGCCAGAGTCATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YLPGPPLELFTYKACKYSRSRTR*ARVMAG
Trigger: TCCTGCCATGACTCTGGCTCATCTAGTCCTGCTCCT...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGCACAGCCAAACTCTCTaGGGTCTGCCCACGTACAAT +
Preference number: 4 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQHSQTL*GLPTYN
Trigger: ATTGTACGTGGGCAGACCGCAGAGAGTTTGGCTGTG...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp GCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTGCCCTGAGGGAAGATAGAAAACCTTaGAGAAACACTCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: AIFAQQALFVRPTLSALREDRKP*RNTLGA
Trigger: TGCTCCGAGAGTGTTTCTCCAAGGTTTTCTATCTTC...CCTCAGGGCACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp GCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTGCCCTGAGGCTGGTATTAGGGTGTTaGCTTGCAATTGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: AIFAQQALFVRPTLSALRLVLGC*LAIVLN
Trigger: ATTCAAGACAATTGCAAGTCAACACCCTAATACCAG...CCTCAGGGCACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp GCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTGCCCTGAGGTTCAGGCAATCCTATTaGTTAGTATCCTTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AIFAQQALFVRPTLSALRFRQSY*LVSLAC
Trigger: ACAGGCTAAGGATACTAACCAATAGGATTGCCTGAA...CCTCAGGGCACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCACCAGCCAAACCAGAATaGCAAAAATGGAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: YLPGPPLELFTYKACKYSPAKPE*QKWRAP
Trigger: AGGGGCTCTCCATTTTTGTCATTCTGGTTTGGCTGG...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATCACAGCCACAAGCATTaGACAGCCCCTCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHHSHKH*TAPLSS
Trigger: ACTGGACAGAGGGGCTGTTCAATGCTTGTGGCTGTG...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAATGTACCAGACTGACTTaGGAATGGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKCTRLT*EWMRRV
Trigger: CACCCTTCGCATCCATTCTCAAGTCAGTCTGGTACA...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp GCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTGCCCTGAGGCATTATTTGAGCATTTaGCAGCACAACCCACATTTA +
Preference number: 4 (lower is better)
Translates to: AIFAQQALFVRPTLSALRHYLSI*QHNPHL
Trigger: TAAATGTGGGTTGTGCTGCCAAATGCTCAAATAATG...CCTCAGGGCACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGGATGAGCCAGAGTCATaGCAGGAGGTTAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQDEPES*QEVNSP
Trigger: TGGAGAATTAACCTCCTGCCATGACTCTGGCTCATC...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATTCTTCGAACTCTTGTTaGGCAGCACGCACTGGAACC +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHSSNSC*AARTGT
Trigger: GGTTCCAGTGCGTGCTGCTCAACAAGAGTTCGAAGA...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGAGTTTCCACGCATCTTaGAACTCCTGCTTATCACAG +
Preference number: 4 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQSFHAS*NSCLSQ
Trigger: CTGTGATAAGCAGGAGTTTCAAGATGCGTGGAAACT...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATGGTAGATGTTGTAGCTaGGGAAGCCGGCATTGTTCC +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHGRCCS*GSRHCS
Trigger: GGAACAATGCCGGCTTCCTCAGCTACAACATCTACC...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATTTCCTTTCCTGCATCTaGCTCTCCAGCAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHFLSCI*LSSSCS
Trigger: GCTGCAACTGCTGGAGAGCCAGATGCAGGAAAGGAA...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TCTCTGCCAAGCACAGTGGTAAATGATGAGTATTACATTAACTCCAATCAATCCGGCCAGTGCCAGTGCTaGCCCAAGAAGTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLPSTVVNDEYYINSNQSGQCQC*PKKFSC
Trigger: ACAAGAAAACTTCTTGGGTCAGCACTGGCACTGGCC...GGATTGATTGGAGTTAATGTAATACTCATCATTTACCACTGTGCTTGGCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp AGTTCTTATTTAGTTCATCCTAGTCCCTTGAATAATCCCCCTCAGCATCAAAATACGCACTGGAACCCCTaGGGAAGGACAGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: SSYLVHPSPLNNPPQHQNTHWNP*GRTADF
Trigger: GAAATCTGCTGTCCTTCCTCAGGGGTTCCAGTGCGT...ATTTTGATGCTGAGGGGGATTATTCAAGGGACTAGGATGAACTAAATAAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGATGGCTCTCCAGCAGTTaGAGCAGATCTGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRWLSSS*SRSANH
Trigger: GTGGTTTGCAGATCTGCTGCAACTGCTGGAGAGCCA...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAAAAACCTGGAGTAAGATaGGCTAGATCTGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKKPGVR*ARSGHS
Trigger: ACTGTGACCAGATCTAGCCCATCTTACTCCAGGTTT...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAGGCAGCTCAGTATTGTaGAAAGAGTATCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: YLPGPPLELFTYKACKYSGSSVL*KEYQTW
Trigger: CCAGGTTTGATACTCTTTCCACAATACTGAGCTGCC...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR CAA 72 bp CAAATAAGAATGTGCAGAACCCTTCAGGCAATCCTATaGGTTAGTATCCTTAGCCTGTTCTTGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: QIRMCRTLQAIL*VSILSLFLTLG
Trigger: CCCTAGGGTCAAGAACAGGCTAAGGATACTAACCAATAGGATTGCCTGAAGGGTTCTGCACATTCTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CAATTCCTAAGTTCAATATTCATAAGGGCTAGCTGGAGAAGACCACTTTGGGCAGTCCCACTTCCATTTTaGACCCCTTCTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QFLSSIFIRASWRRPLWAVPLPF*TPSSSS
Trigger: AGATGAAGAAGAAGGGGTTCAAAATGGAAGTGGGAC...TGCCCAAAGTGGTCTTCTCCAGCTAGCCCTTATGAATATTGAACTTAGGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAAACACCTTTGGGCACTTaGCAAAAATGTATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKTPLGT*QKCIVP
Trigger: TGGGACAATACATTTTTGTCAAGTGCCCAAAGGTGT...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGATCACCACCTCATAGCTaGACACATCTTCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRSPPHS*THLHWQ
Trigger: CTGCCAGTGAAGATGTGTTCAGCTATGAGGTGGTGA...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp CAATTCCTAAGTTCAATATTCATAAGGGCTAGCTGGAGAAGACCACTTTGGGCAAATCGCAGAGTGAAGTaGAATCATCCATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: QFLSSIFIRASWRRPLWANRRVK*NHPCHH
Trigger: ATGGTGGCATGGATGATTGCACTTCACTCTGCGATT...TGCCCAAAGTGGTCTTCTCCAGCTAGCCCTTATGAATATTGAACTTAGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGAAACTCCAGTGATGCCTaGCAACAGGGTCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: NEAGFNYAHRLERANILRNSSDA*QQGHSQ
Trigger: CTGGCTGTGACCCTGTTGGCAGGCATCACTGGAGTT...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGTCAGTGTAAAAGGGTaGCACTCCAGCTTGGACACC +
Preference number: 4 (lower is better)
Translates to: RNTLGATNEAGFNYAHRLVSVKG*HSSLDT
Trigger: GGTGTCCAAGCTGGAGTGGCACCCTTTTACACTGAC...TAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAACATCTTCACTGGCAGTaGCAAAGGGCCCATCAACCG +
Preference number: 4 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKHLHWQ*QRAHQP
Trigger: CGGTTGATGGGCCCTTTGGCACTGCCAGTGAAGATG...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGACTCAGAGTTGGAGATaGTTTGTTTACTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQTQSWR*FVYSGF
Trigger: AAACCCTGAGTAAACAAAGCATCTCCAACTCTGAGT...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAACAGACCTACCCTCAGTaGCCTGAGGATTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKQTYPQ*PEDSGR
Trigger: TCTCCCAGAATCCTCAGGGCACTGAGGGTAGGTCTG...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATTTCATAAGGGCTAGCTaGAGAAGACCACTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHFIRAS*RRPLWA
Trigger: TGCCCAAAGTGGTCTTCTCCAGCTAGCCCTTATGAA...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGAAGCAGAAACCATCCTaGTACATTTCAGAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQKQKPS*YISERL
Trigger: TAGCCTTTCTGAAATGTACCAGGATGGTTTCTGCTT...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATCATGCCACCATTTTATaGAAGGTGAGATTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHHATIL*KVRFLS
Trigger: GGACAGGAATCTCACCTTTCATAAAATGGTGGCATG...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CAATTCCTAAGTTCAATATTCATAAGGGCTAGCTGGAGAAGACCACTTTGGGCAAGAAGTAGATCTTTTTaGGCTTCAGATTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: QFLSSIFIRASWRRPLWARSRSF*ASDWWR
Trigger: ACGCCACCAATCTGAAGCTCAAAAAGATCTACTTCT...TGCCCAAAGTGGTCTTCTCCAGCTAGCCCTTATGAATATTGAACTTAGGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGACAGACTCCTTATAACTaGGGTACCCTCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRQTPYN*GTLSSS
Trigger: TGAACTGGAGAGGGTACCTCAGTTATAAGGAGTCTG...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp TCTCTGCCAAGCACAGTGGTAAATGATGAGTATTACATTAACTCCAATCAATCCAAACTCTCTGCGGTCTaGCCACGTACAATTCGTTCA +
Preference number: 4 (lower is better)
Translates to: SLPSTVVNDEYYINSNQSKLSAV*PRTIRS
Trigger: TGAACGAATTGTACGTGGGCAGACCGCAGAGAGTTT...GGATTGATTGGAGTTAATGTAATACTCATCATTTACCACTGTGCTTGGCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAACAAACTGTTATATTATaGACAGCCAAACTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKQTVIL*TAKLSA
Trigger: CGCAGAGAGTTTGGCTGTGCATAATATAACAGTTTG...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATCAGATTTCGACAGACTaGCAAGAGAATCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHQISTD*QENQHA
Trigger: TGCATGCTGATTCTCTTGCCAGTCTGTCGAAATCTG...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGGCTGTATTAGTAAACTaGAGTATGCTCAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQAVLVN*SMLRCQ
Trigger: TTGACATCTGAGCATACTCCAGTTTACTAATACAGC...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATCCATTTTATGAAAGGTaGGATTCCTGTCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHPFYER*DSCPVV
Trigger: GACAACTGGACAGGAATCTCACCTTTCATAAAATGG...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TCTCTGCCAAGCACAGTGGTAAATGATGAGTATTACATTAACTCCAATCAATCCAAGGATCAGAATTATTaGCTCGGGCATTCACACACC +
Preference number: 4 (lower is better)
Translates to: SLPSTVVNDEYYINSNQSKDQNY*LGHSHT
Trigger: GGTGTGTGAATGCCCGAGTCAATAATTCTGATCCTT...GGATTGATTGGAGTTAATGTAATACTCATCATTTACCACTGTGCTTGGCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTGGGTTTCCAGCAAACTaGGGGATTGGGCATTCCTTT +
Preference number: 4 (lower is better)
Translates to: ATNEAGFNYAHRLERANIGFPAN*GIGHSF
Trigger: AAAGGAATGCCCAATCCCTCAGTTTGCTGGAAACCC...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGAGCATTGTTCCTTTCCTaGATCTGGCTCTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: NEAGFNYAHRLERANILRALFLS*IWLSSS
Trigger: ACTGCTGGAGAGCCAGATGCAGGAAAGGAACAATGC...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTATTGTTGAAAATGAAATaGACTCCCCGAGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: RNTLGATNEAGFNYAHRLLLKMK*TPRGPD
Trigger: GTCTGGCCCTCGGGGAGTGCATTTCATTTTCAACAA...TAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp CAGTTACCCTGCTGTATTAGTAAACTGGAGTATGCTCAGATGTCAATACTGTCACCAACGATGCGGATATaGATACTAAAGAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLPCCISKLEYAQMSILSPTMRI*ILKKSS
Trigger: GGAAGACTTCTTTAGTATCCATATCCGCATCGTTGG...TGACAGTATTGACATCTGAGCATACTCCAGTTTACTAATACAGCAGGGTAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATATTCATTATCCCAGTTaGGCCGTCCATACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHIHYPS*AVHTKS
Trigger: AGACTTTGTATGGACGGCCCAACTGGGATAATGAAT...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp TCTCTGCCAAGCACAGTGGTAAATGATGAGTATTACATTAACTCCAATCAATCCGGCCAGACTCAGAGTTaGAGATGCTTTGTTTACTCA +
Preference number: 4 (lower is better)
Translates to: SLPSTVVNDEYYINSNQSGQTQS*RCFVYS
Trigger: TGAGTAAACAAAGCATCTCCAACTCTGAGTCTGGCC...GGATTGATTGGAGTTAATGTAATACTCATCATTTACCACTGTGCTTGGCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp TCTCTGCCAAGCACAGTGGTAAATGATGAGTATTACATTAACTCCAATCAATCCTGTAGAAAGAACATCTaGCCCAGTTACCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SLPSTVVNDEYYINSNQSCRKNI*PSYPAV
Trigger: TACAGCAGGGTAACTGGGCCAGATGTTCTTTCTACA...GGATTGATTGGAGTTAATGTAATACTCATCATTTACCACTGTGCTTGGCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGACTGGTGGCTGGCAGCTaGTGGCTTGAGAGAATAAAA +
Preference number: 4 (lower is better)
Translates to: NEAGFNYAHRLERANILRLVAGS*WLERIK
Trigger: TTTTATTCTCTCAAGCCACCAGCTGCCAGCCACCAG...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTATGGTTTTGAAAGGGTaGGTGACCACCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ATNEAGFNYAHRLERANIMVLKG*VTTLVM
Trigger: CATCACCAAGGTGGTCACTCACCCTTTCAAAACCAT...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATATATTTGTACCAGACTaGCTTGAGAATGGATGCGAA +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHIFVPD*LENGCE
Trigger: TTCGCATCCATTCTCAAGTCAGTCTGGTACAAATAT...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTTTCATCCTAGTCCCTTaGATAATCCCCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: ATNEAGFNYAHRLERANIFILVP*IIPLSI
Trigger: GATGCTGAGGGGGATTATTCAAGGGACTAGGATGAA...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGACTGGCCCAGTTACCCTaGTGTATTAGTAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: NEAGFNYAHRLERANILRLAQLP*CISKLE
Trigger: CTCCAGTTTACTAATACAGCAGGGTAACTGGGCCAG...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATCTTCAAATAAGAATGTaGAGAACCCTTCAGGCAATC +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHLQIRM*RTLQAI
Trigger: GATTGCCTGAAGGGTTCTGCACATTCTTATTTGAAG...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAATTCGTTCAGCTCCATaGATGGCAAGGCCAATGAAG +
Preference number: 4 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKIRSAP*MARPMK
Trigger: CTTCATTGGCCTTGCCATCCATGGAGCTGAACGAAT...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAAGTTCTAAACATTTGTaGCTCCAAGGGGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKSSKHL*LQGVGQ
Trigger: TTGCCCCACCCCTTGGAGCCACAAATGTTTAGAACT...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAAGATCACAAAGAGATaGTGTGTGTACCAAAAGACT +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHKITKR*CVYQKT
Trigger: AGTCTTTTGGTACACACATCATCTCTTTGTGATCTT...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGATCAATTAGCATTATTTaGGCATTTGGCAGCACAACC +
Preference number: 4 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRSISII*AFGSTT
Trigger: GGTTGTGCTGCCAAATGCTCAAATAATGCTAATTGA...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR CAA 72 bp ACAAATAAACCATTAGTCACACAGATGCGATCCATTTaGTGTGTGTATTTACGGAAAATAAGGGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TNKPLVTQMRSI*CVYLRKIRGGC
Trigger: ACACCCACCCCTTATTTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp AGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTATTAACAAAACTTACTTaGGTATCCGCTCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RNTLGATNEAGFNYAHRLLTKLT*VSALCQ
Trigger: TTGGCAGAGAGCGGATACTCAAGTAAGTTTTGTTAA...TAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp CAGTTACCCTGCTGTATTAGTAAACTGGAGTATGCTCAGATGTCAATACTGTCAGTAAAAGAACTTAGGTaGAATATCATAAACCCGGTA +
Preference number: 4 (lower is better)
Translates to: QLPCCISKLEYAQMSILSVKELR*NIINPV
Trigger: TACCGGGTTTATGATATTCCACCTAAGTTCTTTTAC...TGACAGTATTGACATCTGAGCATACTCCAGTTTACTAATACAGCAGGGTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATTTTTTATCTCATAACTaGATAACACAGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHFLSHN*ITQGRS
Trigger: AGATCTGCCCTGTGTTATCCAGTTATGAGATAAAAA...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAGACTTGCAATTGTCTTaGATTCATTATCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKDLQLS*IHYPSW
Trigger: CCAACTGGGATAATGAATTCAAGACAATTGCAAGTC...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGAGATTGGTGGCGTTATTaGAATATTTGTACCAGACTG +
Preference number: 4 (lower is better)
Translates to: NEAGFNYAHRLERANILRDWWRY*NICTRL
Trigger: CAGTCTGGTACAAATATTGCAATAACGCCACCAATC...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAAGCAAACTGAGGGATTaGGCATTCCTTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKSKLRD*AFLYFS
Trigger: GGAAAAATAAAGGAATGCCCAATCCCTCAGTTTGCT...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CCA 90 bp AGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTATATATAGCTACTCCTTaGTTTCCTTCTTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: RNTLGATNEAGFNYAHRLYIATP*FPSSFG
Trigger: CCCAAAAGAAGAAGGAAACCAAGGAGTAGCTATATA...TAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGAGTCACTAATAAGTGTTaGGACACTCTCAACATGTAT +
Preference number: 4 (lower is better)
Translates to: NEAGFNYAHRLERANILRVTNKC*DTLNMY
Trigger: ATACATGTTGAGAGTGTCTCAACACTTATTAGTGAC...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR TCA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGACCTCATTACCGAAGTTaGAGAGTTCTAAACATTTGT +
Preference number: 4 (lower is better)
Translates to: NEAGFNYAHRLERANILRPHYRS*RVLNIC
Trigger: ACAAATGTTTAGAACTCTTCAACTTCGGTAATGAGG...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR GCA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAAAGTGCAATCATCCATaGCACCATTTTATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKKCNHP*HHFMKG
Trigger: ACCTTTCATAAAATGGTGGCATGGATGATTGCACTT...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378588.5
3UTR CAA 72 bp CACAGTTTCATAATCTTAGGGAAGTTACTGAACCTTTaGATCCTTTCCCTTTTGATTCTAAAATTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: HSFIILGKLLNL*ILSLLILKLSP
Trigger: TGGACTCAATTTTAGAATCAAAAGGGAAAGGATCAAAAGGTTCAGTAACTTCCCTAAGATTATGAAACTGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGGTCTTCGAACTCTTGTaGAGCAGCACGCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQVFELL*SSTHWN
Trigger: GTTCCAGTGCGTGCTGCTCAACAAGAGTTCGAAGAC...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAACTGGCTCTCCAGCAGTaGCAGCAGATCTGCAAACCA +
Preference number: 5 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKLALQQ*QQICKP
Trigger: TGGTTTGCAGATCTGCTGCAACTGCTGGAGAGCCAG...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAGATGACCACCTTCTGTaGAGATCGCCAAAACCGCAC +
Preference number: 5 (lower is better)
Translates to: YLPGPPLELFTYKACKYSDDHLL*RSPKPH
Trigger: GTGCGGTTTTGGCGATCTCAACAGAAGGTGGTCATC...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGCTGGAGAAGACCACTTaGGGCAGGAAATTAGTCTGC +
Preference number: 5 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQLEKTT*GRKLVC
Trigger: GCAGACTAATTTCCTGCCCAAAGTGGTCTTCTCCAG...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS TCA 90 bp TCGCAGAGTGAAGTGCAATCATCCATGCCACCATTTTATGAAAGGTaGGATTCCTGTCCAGTTGTCTTCGAACTCTTGTTGAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: SQSEVQSSMPPFYER*DSCPVVFELLLSST
Trigger: CGTGCTGCTCAACAAGAGTTCGAAGACAACTGGACAGGAATCTCACCTTTCATAAAATGGTGGCATGGATGATTGCACTTCACTCTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS TCA 90 bp GCTTCAGGTCCACAGAGGAAAACTCCTATTCTGGTATTAGGGTGTTaGCTTGCAATTGTCTTGAATTCATTATCCCAGTTGGGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: ASGPQRKTPILVLGC*LAIVLNSLSQLGRP
Trigger: TGGACGGCCCAACTGGGATAATGAATTCAAGACAATTGCAAGTCAACACCCTAATACCAGAATAGGAGTTTTCCTCTGTGGACCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp CAGTTACCCTGCTGTATTAGTAAACTGGAGTATGCTCAGATGTCAATACTGTCAGTTGTCTTCGAACTCTaGTTGAGCAGCACGCACTGG +
Preference number: 5 (lower is better)
Translates to: QLPCCISKLEYAQMSILSVVFEL*LSSTHW
Trigger: CCAGTGCGTGCTGCTCAACAAGAGTTCGAAGACAAC...TGACAGTATTGACATCTGAGCATACTCCAGTTTACTAATACAGCAGGGTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTGGGTGCCACTCCAGCTaGGACACCTTTGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: ATNEAGFNYAHRLERANIGCHSS*DTFGHL
Trigger: CAAGTGCCCAAAGGTGTCCAAGCTGGAGTGGCACCC...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCATGTCCCACTTCCATTTaGAACCCCTTCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: YLPGPPLELFTYKACKYSCPTSI*NPFFFI
Trigger: GATGAAGAAGAAGGGGTTCAAAATGGAAGTGGGACA...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGTCCATACAAAGTCTTTaGTTTCAGGCCTGTGATCAC +
Preference number: 5 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQSIQSL*FQACDH
Trigger: GTGATCACAGGCCTGAAACAAAAGACTTTGTATGGA...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TATCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCACTTCAGGCAATCCTATaGGTTAGTATCCTTAGCCTG +
Preference number: 5 (lower is better)
Translates to: YLPGPPLELFTYKACKYSLQAIL*VSILSL
Trigger: CAGGCTAAGGATACTAACCAATAGGATTGCCTGAAG...TGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATAAGAGTTCTAAACATTaGTGGCTCCAAGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHKSSKH*WLQGVG
Trigger: CCCCACCCCTTGGAGCCACAAATGTTTAGAACTCTT...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TTTCAGAAAGGCTATATTCGCACAGCAGGCCTTATTTGTCAGACCTACCCTCAGGAGATAACTTTCATTTaGCCTGTCTCCAAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: FQKGYIRTAGLICQTYPQEITFI*PVSKFR
Trigger: TCTGAACTTGGAGACAGGCAAAATGAAAGTTATCTC...CTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTGCGAATATAGCCTTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGATCACAGCCACAAGCATaGAACAGCCCCTCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: NEAGFNYAHRLERANILRSQPQA*NSPSVQ
Trigger: CTGGACAGAGGGGCTGTTCAATGCTTGTGGCTGTGA...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGACTGAGGAAGCCGGCATaGTTCCTTTCCTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: NEAGFNYAHRLERANILRLRKPA*FLSCIW
Trigger: CCAGATGCAGGAAAGGAACAATGCCGGCTTCCTCAG...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AGTTCTTATTTAGTTCATCCTAGTCCCTTGAATAATCCCCCTCAGCATCAAAATCACAGCAGGCCTTATTaGTCAGACCTACCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SSYLVHPSPLNNPPQHQNHSRPY*SDLPSV
Trigger: CACTGAGGGTAGGTCTGACAAATAAGGCCTGCTGTG...ATTTTGATGCTGAGGGGGATTATTCAAGGGACTAGGATGAACTAAATAAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGATTGTACCAGACTGACTaGAGAATGGATGCGAAGGGT +
Preference number: 5 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRLYQTD*RMDAKG
Trigger: ACCCTTCGCATCCATTCTCAAGTCAGTCTGGTACAA...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TCTCCCAGGTCCCCCGCTAGAATTATTCACATACAAAGCCTGCAAGTATTCAAAAGATTGGTGGCGTTATaGCAATATTTGTACCAGACT +
Preference number: 5 (lower is better)
Translates to: SPRSPARIIHIQSLQVFKRLVAL*QYLYQT
Trigger: AGTCTGGTACAAATATTGCAATAACGCCACCAATCT...TTTGAATACTTGCAGGCTTTGTATGTGAATAATTCTAGCGGGGGACCTGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS TCA 90 bp GAGATAACTTTCATTTTGCCTGTCTCCAAGTTCAGAGAGTGCTACTaGATAAGGATCAGAATTATTGACTCGGGCATTCACACACCATTC +
Preference number: 5 (lower is better)
Translates to: EITFILPVSKFRECY*IRIRIIDSGIHTPF
Trigger: GAATGGTGTGTGAATGCCCGAGTCAATAATTCTGATCCTTATTCAGTAGCACTCTCTGAACTTGGAGACAGGCAAAATGAAAGTTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGAAATTCATTATCCCAGTaGGGCCGTCCATACAAAGTC +
Preference number: 5 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRNSLSQ*GRPYKV
Trigger: GACTTTGTATGGACGGCCCAACTGGGATAATGAATT...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TCTCTGCCAAGCACAGTGGTAAATGATGAGTATTACATTAACTCCAATCAATCCAAGAAAACCCTGCTCTaGGCCACACTAACAGTGATT +
Preference number: 5 (lower is better)
Translates to: SLPSTVVNDEYYINSNQSKKTLL*ATLTVI
Trigger: AATCACTGTTAGTGTGGCCAAGAGCAGGGTTTTCTT...GGATTGATTGGAGTTAATGTAATACTCATCATTTACCACTGTGCTTGGCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp CCTTGGAGAAACACTCTCGGAGCAACAAATGAAGCTGGTTTTAATTATGCACATCAGATGCGATCCATTTaGTGTGTGTATTTACGGAAA +
Preference number: 5 (lower is better)
Translates to: PWRNTLGATNEAGFNYAHQMRSI*CVYLRK
Trigger: TTTCCGTAAATACACACACAAAATGGATCGCATCTG...ATGTGCATAATTAAAACCAGCTTCATTTGTTGCTCCGAGAGTGTTTCTCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp GCAACAAATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTGTTCATCCTAGTCCCTaGAATAATCCCCCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: ATNEAGFNYAHRLERANIVHPSP*NNPPQH
Trigger: ATGCTGAGGGGGATTATTCAAGGGACTAGGATGAAC...AATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATTTGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGAGACACCTTTGGGCACTaGACAAAAATGTATTGTCCC +
Preference number: 5 (lower is better)
Translates to: NEAGFNYAHRLERANILRDTFGH*TKMYCP
Trigger: GGGACAATACATTTTTGTCAAGTGCCCAAAGGTGTC...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp TTTGGGCAGGAAATTAGTCTGCATTTATTTTATAGCACAAGGAGCAGGACTAGATCTGGTATTAGGGTGTaGACTTGCAATTGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: FGQEISLHLFYSTRSRTRSGIRV*TCNCLE
Trigger: TTCAAGACAATTGCAAGTCAACACCCTAATACCAGA...TCTAGTCCTGCTCCTTGTGCTATAAAATAAATGCAGACTAATTTCCTGCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AGTTCTTATTTAGTTCATCCTAGTCCCTTGAATAATCCCCCTCAGCATCAAAATGCGTTATTGCAATATTaGTACCAGACTGACTTGAGA +
Preference number: 5 (lower is better)
Translates to: SSYLVHPSPLNNPPQHQNALLQY*YQTDLR
Trigger: TCTCAAGTCAGTCTGGTACAAATATTGCAATAACGC...ATTTTGATGCTGAGGGGGATTATTCAAGGGACTAGGATGAACTAAATAAGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGATTTTTGAGCTTCAGATaGGTGGCGTTATTGCAATAT +
Preference number: 5 (lower is better)
Translates to: NEAGFNYAHRLERANILRFLSFR*VALLQY
Trigger: ATATTGCAATAACGCCACCAATCTGAAGCTCAAAAA...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AATAAACCATTAGTCACACAGATGCGATCCATTTTGTGTGTGTATTTACGGAAAATATATAGCTACTCCTaGGTTTCCTTCTTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: NKPLVTQMRSILCVYLRKIYSYS*VSFFFW
Trigger: CCAAAAGAAGAAGGAAACCAAGGAGTAGCTATATAT...TTTCCGTAAATACACACACAAAATGGATCGCATCTGTGTGACTAATGGTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS-3UTR CAA 90 bp AATGAAGCTGGTTTTAATTATGCACATAGGTTAGAAAGGGCCAATATTCTCAGAGAGAATCAGATTCCTTaGGTCTATGACAGTAATAGA +
Preference number: 5 (lower is better)
Translates to: NEAGFNYAHRLERANILRENQIP*VYDSNR
Trigger: TCTATTACTGTCATAGACCAAAGGAATCTGATTCTC...TCTGAGAATATTGGCCCTTTCTAACCTATGTGCATAATTAAAACCAGCTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS GCA 72 bp AAGTCTTCCTCAGGGGCGGATGTCAGTGTAAAAGGGTaGCACTCCAGCTTGGACACCTTTGGGCACTTGACA +
Preference number: 6 (lower is better)
Translates to: KSSSGADVSVKG*HSSLDTFGHLT
Trigger: TGTCAAGTGCCCAAAGGTGTCCAAGCTGGAGTGGCACCCTTTTACACTGACATCCGCCCCTGAGGAAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378588.5
ENST00000492288.1
CDS CAA 72 bp AGGGTGAGTGACCACCTTGGTGATGACCACCTTCTGTaGAGATCGCCAAAACCGCACCAACCTCTCACAGAG +
Preference number: 6 (lower is better)
Translates to: RVSDHLGDDHLL*RSPKPHQPLTE
Trigger: CTCTGTGAGAGGTTGGTGCGGTTTTGGCGATCTCAACAGAAGGTGGTCATCACCAAGGTGGTCACTCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378588.5
ENST00000492288.1
CDS CAA 90 bp TCCTTGTTGAAAATGAAATGCACTCCCCGAGGGCCAGACTCAGAGTaGGAGATGCTTTGTTTACTCAGGGTTTCAGCCAAGGCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: SLLKMKCTPRGPDSE*EMLCLLRVSAKASG
Trigger: ACCTGAAGCCTTGGCTGAAACCCTGAGTAAACAAAGCATCTCCAACTCTGAGTCTGGCCCTCGGGGAGTGCATTTCATTTTCAACAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS GCA 72 bp ACTGTTATATTATGCACAGCCAAACTCTCTGCGGTCTaGCCACGTACAATTCGTTCAGCTCCATGGATGGCA +
Preference number: 6 (lower is better)
Translates to: TVILCTAKLSAV*PRTIRSAPWMA
Trigger: TGCCATCCATGGAGCTGAACGAATTGTACGTGGGCAGACCGCAGAGAGTTTGGCTGTGCATAATATAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS CAA 72 bp AAAATGAAATGCACTCCCCGAGGGCCAGACTCAGAGTaGGAGATGCTTTGTTTACTCAGGGTTTCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: KMKCTPRGPDSE*EMLCLLRVSAK
Trigger: CTTGGCTGAAACCCTGAGTAAACAAAGCATCTCCAACTCTGAGTCTGGCCCTCGGGGAGTGCATTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS CAA 90 bp GGCTTCAGGTCCACAGAGGAAAACTCCTATTCTGGTATTAGGGTGTaGACTTGCAATTGTCTTGAATTCATTATCCCAGTTGGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: GFRSTEENSYSGIRV*TCNCLEFIIPVGPS
Trigger: GGACGGCCCAACTGGGATAATGAATTCAAGACAATTGCAAGTCAACACCCTAATACCAGAATAGGAGTTTTCCTCTGTGGACCTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS GCA 72 bp ACTGTTATATTATGCACAGCCAAACTCTCTGCGGTCTaGCCACGTACAATTCGTCTTGAATTGCTCAGAGCC +
Preference number: 6 (lower is better)
Translates to: TVILCTAKLSAV*PRTIRLELLRA
Trigger: GGCTCTGAGCAATTCAAGACGAATTGTACGTGGGCAGACCGCAGAGAGTTTGGCTGTGCATAATATAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492288.1
CDS GCA 72 bp TTCACAAACTGTTATATTATGCACAGCCAAACTCTCTaGGGTCTGCCCACGTACAATTCGTTCAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: FTNCYIMHSQTL*GLPTYNSFSSM
Trigger: CATGGAGCTGAACGAATTGTACGTGGGCAGACCGCAGAGAGTTTGGCTGTGCATAATATAACAGTTTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS CAA 72 bp AAAGGGTGCCACTCCAGCTTGGACACCTTTGGGCACTaGACAAAAATGTATTGTCCCACTTCCATTTTGAAC +
Preference number: 6 (lower is better)
Translates to: KGCHSSLDTFGH*TKMYCPTSILN
Trigger: GTTCAAAATGGAAGTGGGACAATACATTTTTGTCAAGTGCCCAAAGGTGTCCAAGCTGGAGTGGCACCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378588.5
ENST00000492288.1
CDS GCA 72 bp AATGGTGTGAATCGCAGAGTGAAGTGCAATCATCCATaGCACCATTTTATGAAAGGTGAGATTCCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: NGVNRRVKCNHP*HHFMKGEIPVQ
Trigger: CTGGACAGGAATCTCACCTTTCATAAAATGGTGGCATGGATGATTGCACTTCACTCTGCGATTCACACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS TCA 72 bp GAAGTGCAATCATCCATGCCACCATTTTATGAAAGGTaGGATTCCTGTCCAGTTGTCTTCGAACTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: EVQSSMPPFYER*DSCPVVFELLL
Trigger: CAACAAGAGTTCGAAGACAACTGGACAGGAATCTCACCTTTCATAAAATGGTGGCATGGATGATTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378588.5
CDS CAA 72 bp TTTTTGAGCTTCAGATTGGTGGCGTTATTGCAATATTaGTACCAGACTGACTTGAGAATGGATGCGAAGGGT +
Preference number: 6 (lower is better)
Translates to: FLSFRLVALLQY*YQTDLRMDAKG
Trigger: ACCCTTCGCATCCATTCTCAAGTCAGTCTGGTACAAATATTGCAATAACGCCACCAATCTGAAGCTCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378588.5