RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYB5RL (Homo sapiens)

Ensembl gene IDs: ENSG00000215883

Ensembl transcript IDs: ENST00000287899.13, ENST00000420054.5, ENST00000421415.5, ENST00000462299.1, ENST00000490863.5, ENST00000493530.2, ENST00000497820.1, ENST00000528287.5, ENST00000534324.5, ENST00000534324.6

Found 856 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGCCCAGGGGCACTGGGTTCCTGGGATAGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCT +
Preference number: 1 (lower is better)
Translates to: AAQGHWVPGIGVPGS*GGWTVIGSRSVGQA
Trigger: AGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCAGGAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR TCA 90 bp TCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCCC +
Preference number: 1 (lower is better)
Translates to: SWGSAWTWLPLKSPP*LPGWLLTSSGPLQP
Trigger: GGGCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 90 bp CATAGCAACCATCACCAGGGCACCAAGCTGAAGGCACAGGCTGAGTaGCTGCCTGCAGGAGGAGGGAGGGGCGTTTCCTTCCCGTGCCTC +
Preference number: 1 (lower is better)
Translates to: HSNHHQGTKLKAQAE*LPAGGGRGVSFPCL
Trigger: GAGGCACGGGAAGGAAACGCCCCTCCCTCCTCCTGCAGGCAGCCACTCAGCCTGTGCCTTCAGCTTGGTGCCCTGGTGATGGTTGCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 90 bp GAGGTGGGTGTGAGTGGGCGGTGGCATACAAAAAGTCTGGAGAGGTaGCAGAGCAGAGAGGCCCTACCCCAAGGCCACAGGGAGACAGGG +
Preference number: 1 (lower is better)
Translates to: EVGVSGRWHTKSLER*QSREALPQGHRETG
Trigger: CCCTGTCTCCCTGTGGCCTTGGGGTAGGGCCTCTCTGCTCTGCCACCTCTCCAGACTTTTTGTATGCCACCGCCCACTCACACCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR TCA 90 bp CCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAG +
Preference number: 1 (lower is better)
Translates to: PTPTPPGAQPGLGFL*RVLPDSQAGCSPPQ
Trigger: CTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 90 bp CTGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTCCTGACTCCTGCTCTATCTTTAGAT +
Preference number: 1 (lower is better)
Translates to: LGWVDRDRQPLSGTS*ERDPGLLTPALSLD
Trigger: ATCTAAAGATAGAGCAGGAGTCAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR GCA 90 bp CTTCTTGGGCTTGCTCAGCACCTTGTGGGGCACAGCACCCGACCCTaGACTCTCAAGTTTCCAGGCGACAGGAGCCCTTTAGGCTTCTTG +
Preference number: 1 (lower is better)
Translates to: LLGLAQHLVGHSTRP*TLKFPGDRSPLGFL
Trigger: CAAGAAGCCTAAAGGGCTCCTGTCGCCTGGAAACTTGAGAGTGCAGGGTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCCCAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 90 bp ACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGGGCCAGGCCCGTGCCCGCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: TRVTKVSSFSLSVML*RIGTMGARPVPAAS
Trigger: GCTGGCTGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 90 bp CAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCATGGCCTAGGCTTTGGAAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: QAWTPCLLIPVCAPS*VPVAGSWPRLWKRG
Trigger: GCCTCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
ENST00000534324.5
3UTR CCA 90 bp TCCAAGAGGTCTGAACTCACACACCACACCCCACACTCTTCTTCTTaGGCTTGCTCAGCACCTTGTGGGGCACAGCACCCGACCCTGCAC +
Preference number: 1 (lower is better)
Translates to: SKRSELTHHTPHSSS*ACSAPCGAQHPTLH
Trigger: GTGCAGGGTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGGGGTGTGGTGTGTGAGTTCAGACCTCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR TCA 90 bp ACGCCTCCCACAACACGCAGTGGGCATCATCAGAGGAACAGCAGCTaGTGGGAACCATGCCCCCACAGCTCCAAGAGGTCTGAACTCACA +
Preference number: 1 (lower is better)
Translates to: TPPTTRSGHHQRNSS*WEPCPHSSKRSELT
Trigger: TGTGAGTTCAGACCTCTTGGAGCTGTGGGGGCATGGTTCCCATCAGCTGCTGTTCCTCTGATGATGCCCACTGCGTGTTGTGGGAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 90 bp AGGTCTGAACTCACACACCACACCCCACACTCTTCTTCTTGGGCTTaGTCAGCACCTTGTGGGGCACAGCACCCGACCCTGCACTCTCAA +
Preference number: 1 (lower is better)
Translates to: RSELTHHTPHSSSWA*SAPCGAQHPTLHSQ
Trigger: TTGAGAGTGCAGGGTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGGGGTGTGGTGTGTGAGTTCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 90 bp GATGACACTTATGGGTACAGCGACAGAAAAGCACACAAGCCTCTCTaGTCACTGACCAAGCTGGAGTGGAAGAGACAGGCGAGGCTCCCG +
Preference number: 1 (lower is better)
Translates to: DDTYGYSDRKAHKPL*SLTKLEWKRQARLP
Trigger: CGGGAGCCTCGCCTGTCTCTTCCACTCCAGCTTGGTCAGTGAGCAGAGAGGCTTGTGTGCTTTTCTGTCGCTGTACCCATAAGTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CCA 90 bp CGACATCCAGGAAGTGCTGAGCATCCTCCCCTGTTAGGGGTACAATaGGCCGGCCCTCATGCTCACATGCAGATGACACTTATGGGTACA +
Preference number: 1 (lower is better)
Translates to: RHPGSAEHPPLLGVQ*AGPHAHMQMTLMGT
Trigger: TGTACCCATAAGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCATTGTACCCCTAACAGGGGAGGATGCTCAGCACTTCCTGGATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR TCA 90 bp GCGAGTGTAAGGGATGAGCTGACGCAAGAGAACATGTTTGGAGCCTaGGAGGTGGGTGTGAGTGGGCGGTGGCATACAAAAAGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: ASVRDELTQENMFGA*EVGVSGRWHTKSLE
Trigger: CTCCAGACTTTTTGTATGCCACCGCCCACTCACACCCACCTCTCAGGCTCCAAACATGTTCTCTTGCGTCAGCTCATCCCTTACACTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CCA 90 bp GGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGG +
Preference number: 1 (lower is better)
Translates to: GPIQDSRGPHLALRM*SSHRTQDLHVSGSW
Trigger: CCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 90 bp TGTCTAGCTCCTAAGTCTCCCTTCTCCTACTACAACATCACACGGTaGCCACGCCTCCCACAACACGCAGTGGGCATCATCAGAGGAACA +
Preference number: 1 (lower is better)
Translates to: CLAPKSPFSYYNITR*PRLPQHAVGIIRGT
Trigger: TGTTCCTCTGATGATGCCCACTGCGTGTTGTGGGAGGCGTGGCCACCGTGTGATGTTGTAGTAGGAGAAGGGAGACTTAGGAGCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR TCA 90 bp AACATTAGTTGTTTATCGCTCAGGTATTCGACATCCAGGAAGTGCTaGGCATCCTCCCCTGTTAGGGGTACAATGGGCCGGCCCTCATGC +
Preference number: 1 (lower is better)
Translates to: NISCLSLRYSTSRKC*ASSPVRGTMGRPSC
Trigger: GCATGAGGGCCGGCCCATTGTACCCCTAACAGGGGAGGATGCTCAGCACTTCCTGGATGTCGAATACCTGAGCGATAAACAACTAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 90 bp CGCTTCTGCGACCAAGAATCTGTCCTCAGGCCCTCTAGTAGCTGTTaGCTTCCTGAAGCTTGGGATGCATATGCACAAAGAGAGCTCTGT +
Preference number: 1 (lower is better)
Translates to: RFCDQESVLRPSSSC*LPEAWDAYAQRELC
Trigger: ACAGAGCTCTCTTTGTGCATATGCATCCCAAGCTTCAGGAAGGCAACAGCTACTAGAGGGCCTGAGGACAGATTCTTGGTCGCAGAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 90 bp GCCACCGCGCCCGGCCCAGTAACAATCTTTATACACATCTCTGGTTaGACTCATGTGTCACACACAACCTTTACCACAATCACATGCTGG +
Preference number: 1 (lower is better)
Translates to: ATAPGPVTIFIHISG*THVSHTTFTTITCW
Trigger: CCAGCATGTGATTGTGGTAAAGGTTGTGTGTGACACATGAGTGCAACCAGAGATGTGTATAAAGATTGTTACTGGGCCGGGCGCGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CCA 90 bp TCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTCCTCCAAAGAGCTCTAAGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: SSHRTQDLHVSGSWH*RKGRILLQRALSLS
Trigger: GGAGAGGCTTAGAGCTCTTTGGAGGAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 90 bp GCTAGGAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTaGGCAAGTCATTTAGTCTCACTGGGCTTCAGTTTCCCGTGTATA +
Preference number: 1 (lower is better)
Translates to: ARRLLVLALPWTVLP*ASHLVSLGFSFPCI
Trigger: TATACACGGGAAACTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR GCA 90 bp AGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACATGCTCCTGTaGCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCT +
Preference number: 1 (lower is better)
Translates to: SFFATGLFRAFNMLL*PCFWKKVTHSTPCS
Trigger: AGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CCA 90 bp TGTACATTTCACTTAGTTATTATGTTTTTAGGACTTCGTCTATATTaGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGC +
Preference number: 1 (lower is better)
Translates to: CTFHLVIMFLGLRLY*YMRMEFTLIAVSTG
Trigger: GCCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAGACGAAGTCCTAAAAACATAATAACTAAGTGAAATGTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR TCA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGGAAGCTGCTCTaGGGAGCTCTCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDPGKLL*GALLAE
Trigger: CTCAGCCAGGAGAGCTCCTCAGAGCAGCTTCCCTGG...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQNPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTGCGTTGGCAGGGCTaGTGGGCGTATAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGLRWQG*WAYRLS
Trigger: AGAGAGCCTATACGCCCATCAGCCCTGCCAACGCAG...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGTCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLSRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp AGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCATGGGGGCCAGGCCCGTaGCCGCAGCCAGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: RPAHSKHLAMSLVNSAEPWGPGP*PQPARG
Trigger: TCCTCTTGCTGGCTGCGGGCACGGGCCTGGCCCCCA...TGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLVCAPS*VPVAGS
Trigger: TGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGAC...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGAACTCCTACTCCTCCTaGGGCTCAGCCTGGACTTGG +
Preference number: 2 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLNSYSS*GSAWTW
Trigger: CCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTT...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGAGCTAGCCCAAGCTGGTaGAGCACGCTAGAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRASPSW*STLEPR
Trigger: CCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGC...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGTGGGGGCCAGGCCCGTaGCCGCAGCCAGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQWGPGP*PQPARG
Trigger: TCCTCTTGCTGGCTGCGGGCACGGGCCTGGCCCCCA...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGTTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGG +
Preference number: 2 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQLSVML*RIGTMG
Trigger: CCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTACTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLLSGTS*ERDPGL
Trigger: GAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAG...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGGTTCCTGGGGTGGGTaGACCGTGATCGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDGSWGG*TVIGSR
Trigger: GCGGCTGCCGATCACGGTCCACCCACCCCAGGAACC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAG +
Preference number: 2 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRARFLG*VDRDRQ
Trigger: CTGCCGATCACGGTCCACCCACCCCAGGAACCTGGC...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLGLSLDLASSEESSLTPGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CCCCACACTCTTCTTCTTGGGCTTGCTCAGCACCTTGTGGGGCACAGCACCCGACTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 2 (lower is better)
Translates to: PHTLLLGLAQHLVGHSTRLKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...TCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR TCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 2 (lower is better)
Translates to: LLGLSLDLASSEESSLTPGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTAGGAGCTCTCCTGGCTaGGTACAAAGAAGGTACGGA +
Preference number: 2 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGRSSPG*VQRRYG
Trigger: TCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCCT...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTTGGCTATGTCTTTGGTaGACTCAGCCGAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGWLCLW*TQPSHR
Trigger: TCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCA...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGGGCAGAAGAATTGCTTaGGCCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLGRRIA*AWEAEV
Trigger: AACCTCTGCCTCCCAGGCTCAAGCAATTCTTCTGCC...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR-3UTR CCA 90 bp TTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCCGCATTGCCCAAGGTCACCTaGCAAATGAGCAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: LSVMLCRIGTMGARPVPALPKVT*QMSSRT
Trigger: GGTCCTGCTGCTCATTTGCCAGGTGACCTTGGGCAA...TGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATC +
Preference number: 2 (lower is better)
Translates to: QERLGANTRQSRAPPCSQGVPGS*GGWTVI
Trigger: GATCACGGTCCACCCACCCCAGGAACCTGGCACCCC...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCTGCCCAGGGGCACTaGGTTCCTGGGATAGGGGTG +
Preference number: 2 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDAAQGH*VPGIGV
Trigger: CACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CAA 90 bp CACACACCACACCCCACACTCTTCTTCTTGGGCTTGCTCAGCACCTaGTGGGGCACAGCACCCGACCCTGCACTCTCAAGTTTCCAGGCG +
Preference number: 2 (lower is better)
Translates to: HTPHPTLFFLGLLST*WGTAPDPALSSFQA
Trigger: CGCCTGGAAACTTGAGAGTGCAGGGTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGGGGTGTGGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR GCA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGGACTCCCAGGCTGGTTaGTCACCTCCTCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSADSQAG*SPPQGP
Trigger: GGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTC...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCTAGCCCAAGCTGGTaGAGCACGCTAGAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDASPSW*STLEPR
Trigger: CCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: VLLFPWCLNRVRLLTGPRVCAPS*VPVAGS
Trigger: TGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGAC...GCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTCTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LSLDLASSEESSLTPRLVLSGTS*ERDPGL
Trigger: GAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAG...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CAA 90 bp CCTGTAGCTAGCCCAAGCTGGTGCAGCACGCTAGAGCCCAGGCTGTaGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACT +
Preference number: 2 (lower is better)
Translates to: PVASPSWCSTLEPRL*KAEFINCSALPRGT
Trigger: AGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAGCCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CAA 90 bp CCCTGCACTCTCAAGTTTCCAGGCGACAGGAGCCCTTTAGGCTTCTaGGCACCAAGGGCACGGCTGGGTCCCCACCAATGTCCCATGATA +
Preference number: 2 (lower is better)
Translates to: PCTLKFPGDRSPLGF*APRARLGPHQCPMI
Trigger: TATCATGGGACATTGGTGGGGACCCAGCCGTGCCCTTGGTGCCAAGAAGCCTAAAGGGCTCCTGTCGCCTGGAAACTTGAGAGTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR TCA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTAACCTCATGGGGCAGATaGGAAGTAGAGGTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLTSWGR*EVEVLS
Trigger: GCTCAGAACCTCTACTTCTCATCTGCCCCATGAGGT...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDNPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCTGCGTTGGCAGGGCTaGTGGGCGTATAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: QQERLGANTRQSRAPPCSLRWQG*WAYRLS
Trigger: AGAGAGCCTATACGCCCATCAGCCCTGCCAACGCAG...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGATCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRSRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAG +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERARFLG*VDRDRQ
Trigger: CTGCCGATCACGGTCCACCCACCCCAGGAACCTGGC...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTGGGGCACTGGGTTCCTaGGATAGGGGTGCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLGALGS*DRGARF
Trigger: GAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCC...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTAGCTAGCCCAAGCTaGTGCAGCACGCTAGAGCCC +
Preference number: 2 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDVASPS*CSTLEP
Trigger: GGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTAC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGGTAGCTAGCCCAAGCTaGTGCAGCACGCTAGAGCCC +
Preference number: 2 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMVASPS*CSTLEP
Trigger: GGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTAC...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCTGCGTTGGCAGGGCTaGTGGGCGTATAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTLRWQG*WAYRLS
Trigger: AGAGAGCCTATACGCCCATCAGCCCTGCCAACGCAG...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMSRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: SHDKRCHQQPGCTEPTRSLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...ACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR GCA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTATTCCAGAAACGGGCCTaGTCTTGGAGGAAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLFQKRA*SWRKVF
Trigger: GAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAA...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGTTGCCCAAGGTCACCTaGCAAATGAGCAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAELPKVT*QMSSRT
Trigger: GGTCCTGCTGCTCATTTGCCAGGTGACCTTGGGCAA...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAA +
Preference number: 2 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGLALRM*SSHRTQ
Trigger: TTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAGGTTCCTGGGGTGGGTaGACCGTGATCGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGGSWGG*TVIGSR
Trigger: GCGGCTGCCGATCACGGTCCACCCACCCCAGGAACC...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGCTGCCCAGGGGCACTaGGTTCCTGGGATAGGGGTG +
Preference number: 2 (lower is better)
Translates to: VRAFPTHYTVLERGYETHAAQGH*VPGIGV
Trigger: CACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAAGGTCCTGGCCCAGGTaGCCAAAGTGGGTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRRSWPR*PKWVFS
Trigger: AGAGAAAACCCACTTTGGCCACCTGGGCCAGGACCT...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VLLFPWCLNRVRLLTGPRTDQCE*LSPTAA
Trigger: AGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGT...GCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR CAA 90 bp GAGTCCTCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTaGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTC +
Preference number: 2 (lower is better)
Translates to: ESSVRPAHSKHLAMS*VNSAEPQTSANGFL
Trigger: GAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERLKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCTGGGGGCCAGGCCCGTaGCCGCAGCCAGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIWGPGP*PQPARG
Trigger: TCCTCTTGCTGGCTGCGGGCACGGGCCTGGCCCCCA...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGACCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGCCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
ENST00000534324.5
3UTR-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGATCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTC +
Preference number: 2 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRSGSWH*RKGRIL
Trigger: GAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGA...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGCATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCATTAGCCAAGCGTGGTaGTGCACGCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLISQAW*CTPVVP
Trigger: TGGGACTACAGGCGTGCACCACCACGCTTGGCTAAT...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR-3UTR TCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp ATGCTCCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: MLLCPCFWKKVTHSTPCSGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...AGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 2 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFLKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCCTGGAACTCTGCCTGTaGGGCGGTCTGAAACCTCCA +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERLELCL*GGLKPP
Trigger: TGGAGGTTTCAGACCGCCTCACAGGCAGAGTTCCAG...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp GTTAGGGGTACAATGGGCCGGCCCTCATGCTCACATGCAGATGACACTTATGGGAGCCTCTCTGCTCACTaGCCAAGCTGGAGTGGAAGA +
Preference number: 2 (lower is better)
Translates to: VRGTMGRPSCSHADDTYGSLSAH*PSWSGR
Trigger: TCTTCCACTCCAGCTTGGTCAGTGAGCAGAGAGGCT...CCCATAAGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCATTGTACCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR TCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGCTATGTCTTTGGTaGACTCAGCCGAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMWLCLW*TQPSHR
Trigger: TCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCA...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCAATAGGAGTCCTCAGTaGGGCCTGCGCACAGTAAGC +
Preference number: 2 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTNRSPQ*GLRTVS
Trigger: GCTTACTGTGCGCAGGCCTCACTGAGGACTCCTATT...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCTTGCCCAAGGTCACCTaGCAAATGAGCAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: LLKAEFINCSALPRGTGFLPKVT*QMSSRT
Trigger: GGTCCTGCTGCTCATTTGCCAGGTGACCTTGGGCAA...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGGGCTCAGCCTGGACTTaGCTTCCTCTGAAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSAGSAWT*LPLKSP
Trigger: AGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCC...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGGGCTCAGCCTGGACTTaGCTTCCTCTGAAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQGSAWT*LPLKSP
Trigger: AGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCC...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGGCTCAGCCTGGACTTaGCTTCCTCTGAAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAGSAWT*LPLKSP
Trigger: AGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCC...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGTCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTC +
Preference number: 2 (lower is better)
Translates to: QERLGANTRQSRAPPCSQSGSWH*RKGRIL
Trigger: GAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGA...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATC +
Preference number: 2 (lower is better)
Translates to: CSESLTLSQGLSHSLYCAGVPGS*GGWTVI
Trigger: GATCACGGTCCACCCACCCCAGGAACCTGGCACCCC...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp AGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCAACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCT +
Preference number: 2 (lower is better)
Translates to: RPAHSKHLAMSLVNSAEPTDQCE*LSPTAA
Trigger: AGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGT...TGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CAA 90 bp GTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATaGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: VLKQPTRVTKVSSFS*SVMLCRIGTMGARP
Trigger: GGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGNPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGCTGGAACTCTGCCTGTaGGGCGGTCTGAAACCTCCA +
Preference number: 2 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKLELCL*GGLKPP
Trigger: TGGAGGTTTCAGACCGCCTCACAGGCAGAGTTCCAG...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTTTCAAAGTATCCTTCTaGGTTGGCAGGGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: QQERLGANTRQSRAPPCSFKVSF*VGRADG
Trigger: CCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAA...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTTCAAAGTATCCTTCTaGGTTGGCAGGGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMFKVSF*VGRADG
Trigger: CCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAA...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTTCCAGAAACGGGCCTaGTCTTGGAGGAAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLFQKRA*SWRKVF
Trigger: GAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAA...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCCGAGCCACAGACCAGTaGGAATGGCTTTCTCCGACA +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERRATDQ*EWLSPT
Trigger: TGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCG...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACCCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGCCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGAACTCCTACTCCTCCTaGGGCTCAGCCTGGACTTGG +
Preference number: 2 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKNSYSS*GSAWTW
Trigger: CCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTT...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAGGGGCACTGGGTTCCTaGGATAGGGGTGCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIGALGS*DRGARF
Trigger: GAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCC...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCGTGCTGGCTCTGCCATaGACTGTTTTACCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERVLALP*TVLPWA
Trigger: TGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCAC...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GTTAGGGGTACAATGGGCCGGCCCTCATGCTCACATGCAGATGACACTTATGGGCAGACCTCAGAGGCCTaGGGAGAGGAAAAGTGTCTT +
Preference number: 2 (lower is better)
Translates to: VRGTMGRPSCSHADDTYGQTSEA*GEEKCL
Trigger: AAGACACTTTTCCTCTCCCCAGGCCTCTGAGGTCTG...CCCATAAGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCATTGTACCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTGCAGTGGTGTGCCCCTaGGCTCTCCCTAGACTAGGC +
Preference number: 2 (lower is better)
Translates to: CSESLTLSQGLSHSLYCAAVVCP*ALPRLG
Trigger: GCCTAGTCTAGGGAGAGCCCAGGGGCACACCACTGC...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGGTCCTGGCCCAGGTaGCCAAAGTGGGTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERRSWPR*PKWVFS
Trigger: AGAGAAAACCCACTTTGGCCACCTGGGCCAGGACCT...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCT +
Preference number: 2 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTTDQCE*LSPTAA
Trigger: AGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGT...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CAA 90 bp GCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATG +
Preference number: 2 (lower is better)
Translates to: ARKAWGQYKTVEGPT*LSGCGQVIEPKTFM
Trigger: CATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: CSESLTLSQGLSHSLYCANPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTAGCAACCGACCAGAGTaGCAAAAGTCTCGTCATTCT +
Preference number: 2 (lower is better)
Translates to: QQERLGANTRQSRAPPCSSNRPE*QKSRHS
Trigger: AGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCT...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 2 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRRSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGCAGAATTCATTAACTaGAGTGCGCTGCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: VRAFPTHYTVLERGYETHAEFIN*SALPRG
Trigger: GCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGTTCAAAGTATCCTTCTaGGTTGGCAGGGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSAFKVSF*VGRADG
Trigger: CCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAA...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACCGAGCCACAGACCAGTaGGAATGGCTTTCTCCGACA +
Preference number: 2 (lower is better)
Translates to: VRAFPTHYTVLERGYETHRATDQ*EWLSPT
Trigger: TGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCG...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp GAACTGCCCCGGACTCTCTACTCCTTAAGTGGAGACCCCCTTAACACTCTTTTTTCCTGGGGCTCAGCCTaGACTTGGCTTCCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: ELPRTLYSLSGDPLNTLFSWGSA*TWLPLK
Trigger: CTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGA...AAAAAGAGTGTTAAGGGGGTCTCCACTTAAGGAGTAGAGAGTCCGGGGCAGTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCTCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTC +
Preference number: 2 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERSGSWH*RKGRIL
Trigger: GAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGA...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAA +
Preference number: 2 (lower is better)
Translates to: LSLDLASSEESSLTPRLVLALRM*SSHRTQ
Trigger: TTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQALSGTS*ERDPGL
Trigger: GAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAG...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCTGCCCAGGGGCACTaGGTTCCTGGGATAGGGGTG +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELAAQGH*VPGIGV
Trigger: CACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTGTGCTGGCTCTGCCATaGACTGTTTTACCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFVLALP*TVLPWA
Trigger: TGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCAC...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCAGTTCGAGACCAACGTaGCAAAACTCCGTCTCTACT +
Preference number: 2 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLSSRPT*QNSVST
Trigger: AGTAGAGACGGAGTTTTGCCACGTTGGTCTCGAACT...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR-3UTR TCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATAGGTCACCTGGCAAATaGGCAGCAGGACCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: FTAAMQRTLASCRAQFENRSPGK*AAGPGL
Trigger: CAGGCCTGGTCCTGCTGCTCATTTGCCAGGTGACCT...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 2 (lower is better)
Translates to: FTAAMQRTLASCRAQFENLKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 2 (lower is better)
Translates to: CSESLTLSQGLSHSLYCAGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGAATAGGAGTCCTCAGTaGGGCCTGCGCACAGTAAGC +
Preference number: 2 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQNRSPQ*GLRTVS
Trigger: GCTTACTGTGCGCAGGCCTCACTGAGGACTCCTATT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTTCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFSDSSL*SFLGPS
Trigger: ACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGA...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTTCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQASRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: FTAAMQRTLASCRAQFENLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGGCAGAATTCATTAACTaGAGTGCGCTGCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQAEFIN*SALPRG
Trigger: GCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGC...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTGAGCTGTCCTTTCACTaGTGCTATGCAAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: SHDKRCHQQPGCTEPTRSELSFH*CYAKNP
Trigger: AGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTC...ACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR GCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGCCCGATGGACATAACTaGATCTGCCTGGTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKPDGHN*ICLVCC
Trigger: ACAGCACACCAGGCAGATGCAGTTATGTCCATCGGG...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGCGAGCCACAGACCAGTaGGAATGGCTTTCTCCGACA +
Preference number: 2 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQRATDQ*EWLSPT
Trigger: TGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCG...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGCTGGGAGGCAGAGGTTaGAGTGAGTCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQLGGRG*SESRSC
Trigger: GCATGATCTCGACTCACTGCAACCTCTGCCTCCCAG...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR-3UTR CCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQAVCAPS*VPVAGS
Trigger: TGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGAC...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGGGGCACTGGGTTCCTaGGATAGGGGTGCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELGALGS*DRGARF
Trigger: GAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCC...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGCTGTGCCCGTGCTTCTaGAAGAAGGTCACACACAGT +
Preference number: 2 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKLCPCF*KKVTHS
Trigger: ACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAG...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CAA 90 bp CCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATaGGCACATGAGGTTGAAGCTAGGAGGCTTCTAGTGCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PLLPVERSSKITDAE*AHEVEARRLLVLAL
Trigger: CAGAGCCAGCACTAGAAGCCTCCTAGCTTCAACCTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCCTGGAACTCTGCCTGTaGGGCGGTCTGAAACCTCCA +
Preference number: 2 (lower is better)
Translates to: SCSSHILGRKRSWFLLRILELCL*GGLKPP
Trigger: TGGAGGTTTCAGACCGCCTCACAGGCAGAGTTCCAG...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTCCTGCTCAGAATCTTTaGCTCTCAGTCAGGGCCTTT +
Preference number: 2 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFPAQNL*LSVRAF
Trigger: AAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGG...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp ATGCTCCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTAGCAACCGACCAGAGTaGCAAAAGTCTCGTCATTCT +
Preference number: 2 (lower is better)
Translates to: MLLCPCFWKKVTHSTPCSSNRPE*QKSRHS
Trigger: AGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCT...AGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGAGGAGCTCTCCTGGCTaGGTACAAAGAAGGTACGGA +
Preference number: 2 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQRSSPG*VQRRYG
Trigger: TCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCCT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGATCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGSDSSL*SFLGPS
Trigger: ACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGA...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGTCGAGGGCCCCACCTTaGTCTCAGGATGTGGTCAAG +
Preference number: 2 (lower is better)
Translates to: LLPVERSSKITDAELAHESRAPP*SQDVVK
Trigger: CTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGA...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACCTTTCACTGCTGCTATaGAAAGAACCCTTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDLSLLL*KEPLLP
Trigger: AGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAG...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTTTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGG +
Preference number: 2 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCLSVML*RIGTMG
Trigger: CCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGCTGAGGCAGAAGAATTaGTTGAGCCTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQLRQKN*LSLGGR
Trigger: TCTGCCTCCCAGGCTCAAGCAATTCTTCTGCCTCAG...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR-3UTR CCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGAACTCCTACTCCTCCTaGGGCTCAGCCTGGACTTGG +
Preference number: 2 (lower is better)
Translates to: LLPVERSSKITDAELAHENSYSS*GSAWTW
Trigger: CCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTT...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTCATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCCATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GCTGCTCTGGTTGAAGGGGGTACTGGGGATCCATCTGGAGCTGTCCTTTCACTGTGGACTGTTTTACCCTaGGCAAGTCATTTAGTCTCA +
Preference number: 2 (lower is better)
Translates to: AALVEGGTGDPSGAVLSLWTVLP*ASHLVS
Trigger: TGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCA...CAGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CAA 90 bp AGCCACCGCGCCCGGCCCAGTAACAATCTTTATACACATCTCTGGTaGCACTCATGTGTCACACACAACCTTTACCACAATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: SHRARPSNNLYTHLW*HSCVTHNLYHNHML
Trigger: CAGCATGTGATTGTGGTAAAGGTTGTGTGTGACACATGAGTGCAACCAGAGATGTGTATAAAGATTGTTACTGGGCCGGGCGCGGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR TCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAACCTCATGGGGCAGATaGGAAGTAGAGGTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTITSWGR*EVEVLS
Trigger: GCTCAGAACCTCTACTTCTCATCTGCCCCATGAGGT...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 2 (lower is better)
Translates to: LEATDQSDKSLVILIVCDGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCCAGAGGAACAGCAGCTaGTGGGAACCATGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLQRNSS*WEPCPH
Trigger: GTGGGGGCATGGTTCCCATCAGCTGCTGTTCCTCTG...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR TCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAAGGAGCTCTCCTGGCTaGGTACAAAGAAGGTACGGA +
Preference number: 2 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIRSSPG*VQRRYG
Trigger: TCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCCT...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATATCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTISDSSL*SFLGPS
Trigger: ACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGA...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGGAGCTGTCCTTTCACTaGTGCTATGCAAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKELSFH*CYAKNP
Trigger: AGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTC...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp CTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGCAGTGCCATCTGGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LYWYMRMEFTLIAVSTGSAIWAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCCAGATGGC...ACTGCCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGTCCTGGGGCTCAGCCTaGACTTGGCTTCCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELSWGSA*TWLPLK
Trigger: CTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGA...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTAGGGAGAGGAAAGGGTaGAGGAAAACTCGCAGACCT +
Preference number: 2 (lower is better)
Translates to: CSESLTLSQGLSHSLYCARERKG*RKTRRP
Trigger: AGGTCTGCGAGTTTTCCTCCACCCTTTCCTCTCCCT...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CAA 90 bp GCTGAGTACAAAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTAGATGCTCTCAAAGGTCTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: AEYKEGTDIPETGLL*EEGFQVDALKGLEA
Trigger: TGCTTCAAGACCTTTGAGAGCATCTACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTTTGTACTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp GAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: EATDQSDKSLVILIVCDAGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...AGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTGTCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 2 (lower is better)
Translates to: PMIRDATSSQAAQNLHGVSALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...CACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR TCA 90 bp GCTGCTCTGGTTGAAGGGGGTACTGGGGATCCATCTGGAGCTGTCCTTTCACTGTCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 2 (lower is better)
Translates to: AALVEGGTGDPSGAVLSLSALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...CAGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGTCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 2 (lower is better)
Translates to: QERLGANTRQSRAPPCSQSALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp TCGTCTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGACAGAGTCAGGCTCCTaGCAGGCCCCCGCTATTTGG +
Preference number: 2 (lower is better)
Translates to: SSILVHADGVHFNCCIYRTESGS*QAPAIW
Trigger: CCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGT...CCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAGACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR GCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACAGACTCCCAGGCTGGTTaGTCACCTCCTCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTDSQAG*SPPQGP
Trigger: GGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTC...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTCTGTCCTTTCACTGCTaGTATGCAAAGAACCCTTGC +
Preference number: 2 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCLSFHC*YAKNPC
Trigger: GCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAG...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTACACACAGTACTCCATaGTCTCTGACCCTGGAACTC +
Preference number: 2 (lower is better)
Translates to: CSESLTLSQGLSHSLYCATHSTP*SLTLEL
Trigger: GAGTTCCAGGGTCAGAGAGCATGGAGTACTGTGTGT...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATTTGCCCAAGGTCACCTaGCAAATGAGCAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: LEATDQSDKSLVILIVCDLPKVT*QMSSRT
Trigger: GGTCCTGCTGCTCATTTGCCAGGTGACCTTGGGCAA...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACAGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAG +
Preference number: 2 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTARFLG*VDRDRQ
Trigger: CTGCCGATCACGGTCCACCCACCCCAGGAACCTGGC...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACAGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATC +
Preference number: 2 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTGVPGS*GGWTVI
Trigger: GATCACGGTCCACCCACCCCAGGAACCTGGCACCCC...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CAA 90 bp GATCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTG +
Preference number: 2 (lower is better)
Translates to: DPSGAVLSLLLCKEP*LPVERSSKITDAEL
Trigger: CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR TCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACTGTTTCTTAGAGTCCTaGACTTTCAGCTTTGATATG +
Preference number: 2 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDCFLES*TFSFDM
Trigger: CATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACA...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCTGTTTCTTAGAGTCCTaGACTTTCAGCTTTGATATG +
Preference number: 2 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTCFLES*TFSFDM
Trigger: CATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACA...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 2 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQRSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGTTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGG +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELLSVML*RIGTMG
Trigger: CCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCTACTGGGGATCCATCTaGAGCTGTCCTTTCACTGCT +
Preference number: 2 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIYWGSI*SCPFTA
Trigger: AGCAGTGAAAGGACAGCTCCAGATGGATCCCCAGTA...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGAAAATGCAGCTGCTCTaGTTGAAGGGGGTACTGGGG +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELKMQLL*LKGVLG
Trigger: CCCCAGTACCCCCTTCAACCAGAGCAGCTGCATTTT...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 2 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQARSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR GCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCGAGCTGTCCTTTCACTaGTGCTATGCAAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIELSFH*CYAKNP
Trigger: AGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTC...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCTTTAACATGCTCCTGTaGCCGTGCTTCTGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIFNMLL*PCFWKK
Trigger: CTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAA...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAAGAGGAAAAGTGTCTTaGTCAAGTCACATACTAGGC +
Preference number: 2 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGRGKVS*SSHILG
Trigger: GCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCT...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGGTGCTGTTGTTTCCCTaGTGTCTGAACAGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSVLLFP*CLNRVR
Trigger: CCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGATAAACCTAGTACTTTaGGAGGCCAAGGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELINLVL*EAKVGG
Trigger: TCCGCCCACCTTGGCCTCCCAAAGTACTAGGTTTAT...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR-3UTR TCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTTGTTTCTTAGAGTCCTaGACTTTCAGCTTTGATATG +
Preference number: 2 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFCFLES*TFSFDM
Trigger: CATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACA...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAA +
Preference number: 2 (lower is better)
Translates to: SCSSHILGRKRSWFLLRILALRM*SSHRTQ
Trigger: TTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGACAGCAAGAAAGGCTTaGGGCCAATACAAGACAGTC +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELTARKA*GQYKTV
Trigger: GACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGCAGTAGGGTTTTGTCATGTTaGCCAGGCTGGCCTCGAACT +
Preference number: 2 (lower is better)
Translates to: LYWYMRMEFTLIAVSTGSRVLSC*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAACATGACAAAACCCT...ACTGCCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CCA 90 bp TCACTTTTAGACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCTCTTTAATTAGGTCCTaGCCCAGGTGGCCAAAGTGG +
Preference number: 2 (lower is better)
Translates to: SLLDLQVELLPSLLGCKFSLIRS*PRWPKW
Trigger: CCACTTTGGCCACCTGGGCCAGGACCTAATTAAAGA...GAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTCTAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR TCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGATCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 2 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGSALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR GCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 2 (lower is better)
Translates to: KEPLLPVERSSKITDAELRSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAACCCCAATATATGAATaGGATAAAAATGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGTPIYE*DKNAAA
Trigger: AGCAGCTGCATTTTTATCCCATTCATATATTGGGGT...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGCTCACCATACTGGTTTaGTTTATAGAAGAAATCTCC +
Preference number: 2 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQLTILV*FIEEIS
Trigger: GGAGATTTCTTCTATAAACCAAACCAGTATGGTGAG...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CCA 90 bp CTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGCAGTTTGGTTACCACTGGGTaGCCTTGTATAATATCTAAA +
Preference number: 2 (lower is better)
Translates to: LYWYMRMEFTLIAVSTGSLVTTG*PCIISK
Trigger: TTTAGATATTATACAAGGCCACCCAGTGGTAACCAA...ACTGCCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CCA 72 bp GGGCACTGGGTTCCTGGGATAGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTG +
Preference number: 3 (lower is better)
Translates to: GHWVPGIGVPGS*GGWTVIGSRSV
Trigger: CACTGAGCGGCTGCCGATCACGGTCCACCCACCCCAGGAACCTGGCACCCCTATCCCAGGAACCCAGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp CTGGGTTCCTGGGATAGGGGTGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACA +
Preference number: 3 (lower is better)
Translates to: LGSWDRGARFLG*VDRDRQPLSGT
Trigger: TGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCAGGAACCTGGCACCCCTATCCCAGGAACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAA +
Preference number: 3 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQVEGPT*LSGCGQ
Trigger: TTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGAC...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp GTTCCTGGGATAGGGGTGCCAGGTTCCTGGGGTGGGTaGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCT +
Preference number: 3 (lower is better)
Translates to: VPGIGVPGSWGG*TVIGSRSVGQA
Trigger: AGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCAGGAACCTGGCACCCCTATCCCAGGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 3 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 3 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTCCTGACTCCTGCTCTA +
Preference number: 3 (lower is better)
Translates to: VDRDRQPLSGTS*ERDPGLLTPAL
Trigger: TAGAGCAGGAGTCAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 3 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR TCA 72 bp TCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: SAWTWLPLKSPP*LPGWLLTSSGP
Trigger: GGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp CCCCACACTCTTCTTCTTGGGCTTGCTCAGCACCTTGTGGGGCACAGCACCCGAGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAA +
Preference number: 3 (lower is better)
Translates to: PHTLLLGLAQHLVGHSTRVEGPT*LSGCGQ
Trigger: TTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGAC...TCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 3 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGATGCTCTCAAAGGTCTaGAAGCAACCGACCAGAGTG +
Preference number: 3 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGMLSKV*KQPTRV
Trigger: CACTCTGGTCGGTTGCTTCAAGACCTTTGAGAGCAT...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACATGCTCTCAAAGGTCTaGAAGCAACCGACCAGAGTG +
Preference number: 3 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDMLSKV*KQPTRV
Trigger: CACTCTGGTCGGTTGCTTCAAGACCTTTGAGAGCAT...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR GCA 72 bp CCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGTAGCAGGCTCATGGCC +
Preference number: 3 (lower is better)
Translates to: PGLDSVSSDSSL*SFLGPSSRLMA
Trigger: GGCCATGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
ENST00000534324.5
3UTR CCA 72 bp GCACACAAGCCTCTCTGCTCACTGACCAAGCTGGAGTaGAAGAGACAGGCGAGGCTCCCGGGAGGAAGTGAC +
Preference number: 3 (lower is better)
Translates to: AHKPLCSLTKLE*KRQARLPGGSD
Trigger: GTCACTTCCTCCCGGGAGCCTCGCCTGTCTCTTCCACTCCAGCTTGGTCAGTGAGCAGAGAGGCTTGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCTATAAACCTAGTACTTaGGGAGGCCAAGGTGGGCGG +
Preference number: 3 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSYKPST*GGQGGR
Trigger: CCGCCCACCTTGGCCTCCCAAAGTACTAGGTTTATA...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR GCA 72 bp CTTGCTCAGCACCTTGTGGGGCACAGCACCCGACCCTaGACTCTCAAGTTTCCAGGCGACAGGAGCCCTTTA +
Preference number: 3 (lower is better)
Translates to: LAQHLVGHSTRP*TLKFPGDRSPL
Trigger: TAAAGGGCTCCTGTCGCCTGGAAACTTGAGAGTGCAGGGTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGATGCAGCTGCTCTGGTaGAAGGGGGTACTGGGGATC +
Preference number: 3 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEMQLLW*KGVLGI
Trigger: GATCCCCAGTACCCCCTTCAACCAGAGCAGCTGCAT...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCCCCGTGCCTCTTCTTTaGCTAGGCTCGATTTTTGAG +
Preference number: 3 (lower is better)
Translates to: LLGLSLDLASSEESSLTPPVPLL*LGSIFE
Trigger: CTCAAAAATCGAGCCTAGCAAAAGAAGAGGCACGGG...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGTCTCGTCATTCTCATaGTCTGTGATGCTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LLGLSLDLASSEESSLTPVSSFS*SVMLCR
Trigger: CCTGCAGAGCATCACAGACAATGAGAATGACGAGAC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGAGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTA +
Preference number: 3 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRETGLL*EEGFQV
Trigger: TACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTC...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR TCA 72 bp GGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTaGACTCAGCCGAGCCACAGACCAGTGCGAATGGCT +
Preference number: 3 (lower is better)
Translates to: GLRTVSTWLCLW*TQPSHRPVRMA
Trigger: AGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp CCCACACTCTTCTTCTTGGGCTTGCTCAGCACCTTGTaGGGCACAGCACCCGACCCTGCACTCTCAAGTTTC +
Preference number: 3 (lower is better)
Translates to: PTLFFLGLLSTL*GTAPDPALSSF
Trigger: GAAACTTGAGAGTGCAGGGTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CCA 72 bp GATTTGTGTGTGGGGAAAACTGGTCTGGTCTCAGCGTaGAGGTGGCATGGAGACTGGGAGCTGGGAGACCCA +
Preference number: 3 (lower is better)
Translates to: DLCVGKTGLVSA*RWHGDWELGDP
Trigger: TGGGTCTCCCAGCTCCCAGTCTCCATGCCACCTCCACGCTGAGACCAGACCAGTTTTCCCCACACACAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 3 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTA +
Preference number: 3 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRETGLL*EEGFQV
Trigger: TACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTC...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR TCA 72 bp ACAACACGCAGTGGGCATCATCAGAGGAACAGCAGCTaGTGGGAACCATGCCCCCACAGCTCCAAGAGGTCT +
Preference number: 3 (lower is better)
Translates to: TTRSGHHQRNSS*WEPCPHSSKRS
Trigger: AGACCTCTTGGAGCTGTGGGGGCATGGTTCCCATCAGCTGCTGTTCCTCTGATGATGCCCACTGCGTGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR TCA 72 bp GGCTGGCCAGGCAGAGGAAGCAGCGAGTGTAAGGGATaGGCTGACGCAAGAGAACATGTTTGGAGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: GWPGRGSSECKG*ADAREHVWSLR
Trigger: TCTCAGGCTCCAAACATGTTCTCTTGCGTCAGCTCATCCCTTACACTCGCTGCTTCCTCTGCCTGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 72 bp ACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGGGCCAGGCCCGTGCCC +
Preference number: 3 (lower is better)
Translates to: TKVSSFSLSVML*RIGTMGARPVP
Trigger: GGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAGAATGACGAGACTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp ACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCATGGCCTAGGCTTTGG +
Preference number: 3 (lower is better)
Translates to: TPCLLIPVCAPS*VPVAGSWPRLW
Trigger: CCAAAGCCTAGGCCATGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
ENST00000534324.5
3UTR CCA 72 bp GGAAGTGCTGAGCATCCTCCCCTGTTAGGGGTACAATaGGCCGGCCCTCATGCTCACATGCAGATGACACTT +
Preference number: 3 (lower is better)
Translates to: GSAEHPPLLGVQ*AGPHAHMQMTL
Trigger: AAGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCATTGTACCCCTAACAGGGGAGGATGCTCAGCACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTAAGTATCCTTCTGCGTaGGCAGGGCTGATGGGCGTA +
Preference number: 3 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLKYPSA*AGLMGV
Trigger: TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTT...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTA +
Preference number: 3 (lower is better)
Translates to: QERLGANTRQSRAPPCSQETGLL*EEGFQV
Trigger: TACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTC...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR TCA 72 bp GAGGCCAGGGCTAGAAGAGGAAATAGGAGTCCTCAGTaGGGCCTGCGCACAGTAAGCACCTGGCTATGTCTT +
Preference number: 3 (lower is better)
Translates to: EARARRGNRSPQ*GLRTVSTWLCL
Trigger: AAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGAGGACTCCTATTTCCTCTTCTAGCCCTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTGTGCTGAGGCCACAGTaGGAGCCCCCATTAGATCCT +
Preference number: 3 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFVLRPQ*EPPLDP
Trigger: AGGATCTAATGGGGGCTCCAACTGTGGCCTCAGCAC...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp CCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTGCACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 3 (lower is better)
Translates to: PMIRDATSSQAAQNLHGVHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...CACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGCCCGTGCCTCTTCTTTaGCTAGGCTCGATTTTTGAG +
Preference number: 3 (lower is better)
Translates to: QERLGANTRQSRAPPCSQPVPLL*LGSIFE
Trigger: CTCAAAAATCGAGCCTAGCAAAAGAAGAGGCACGGG...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGT +
Preference number: 3 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMLCKEP*LPVERS
Trigger: ACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAG...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGAAAGTGGGTTTTCTCTaGGTAACTCCAGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEKVGFL*VTPGKL
Trigger: CAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTT...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
3UTR TCA 72 bp TGTTTATCGCTCAGGTATTCGACATCCAGGAAGTGCTaGGCATCCTCCCCTGTTAGGGGTACAATGGGCCGG +
Preference number: 3 (lower is better)
Translates to: CLSLRYSTSRKC*ASSPVRGTMGR
Trigger: CCGGCCCATTGTACCCCTAACAGGGGAGGATGCTCAGCACTTCCTGGATGTCGAATACCTGAGCGATAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 72 bp GGGGATCCATCTGGAGCTGTCCTTTCACTGCTGCTATaGAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCG +
Preference number: 3 (lower is better)
Translates to: GDPSGAVLSLLL*KEPLLPVERSS
Trigger: CGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGGGCTTGCTCAGCACCTaGTGGGGCACAGCACCCGAC +
Preference number: 3 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSGLLST*WGTAPD
Trigger: GTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCC...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCGTCTCGTCATTCTCATaGTCTGTGATGCTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTVSSFS*SVMLCR
Trigger: CCTGCAGAGCATCACAGACAATGAGAATGACGAGAC...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGATGCTCTCAAAGGTCTaGAAGCAACCGACCAGAGTG +
Preference number: 3 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSAMLSKV*KQPTRV
Trigger: CACTCTGGTCGGTTGCTTCAAGACCTTTGAGAGCAT...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR TCA 72 bp GGGTACAATGGGCCGGCCCTCATGCTCACATGCAGATaGCACTTATGGGTACAGCGACAGAAAAGCACACAA +
Preference number: 3 (lower is better)
Translates to: GYNGPALMLTCR*HLWVQRQKSTQ
Trigger: TTGTGTGCTTTTCTGTCGCTGTACCCATAAGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCATTGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR GCA 72 bp GCCACTGGTCTTTTCAGGGCCTTTAACATGCTCCTGTaGCCGTGCTTCTGGAAGAAGGTCACACACAGTACT +
Preference number: 3 (lower is better)
Translates to: ATGLFRAFNMLL*PCFWKKVTHST
Trigger: AGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAAGGCCCTGAAAAGACCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR GCA 72 bp GCAGACCTCAGAGGCCTGGGGAGAGGAAAAGTGTCTTaGTCAAGTCACATACTAGGCAGGAAGAGATCATGG +
Preference number: 3 (lower is better)
Translates to: ADLRGLGRGKVS*SSHILGRKRSW
Trigger: CCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCTGAGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CCA 72 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAAGACCTTCATGTGTCA +
Preference number: 3 (lower is better)
Translates to: QDSRGPHLALRM*SSHRTQDLHVS
Trigger: TGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp TTCAGGGCCTTTAACATGCTCCTGTGCCCGTGCTTCTaGAAGAAGGTCACACACAGTACTCCATGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: FRAFNMLLCPCF*KKVTHSTPCSL
Trigger: CAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAAGGCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CCA 72 bp GAAAGGGTGGAGGAAAACTCGCAGACCTCAGAGGCCTaGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATAC +
Preference number: 3 (lower is better)
Translates to: ERVEENSQTSEA*GEEKCLAQVTY
Trigger: GTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCTGAGGTCTGCGAGTTTTCCTCCACCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CCA 72 bp CTCAGGCCCTCTAGTAGCTGTTGCCTTCCTGAAGCTTaGGATGCATATGCACAAAGAGAGCTCTGTGTGGCT +
Preference number: 3 (lower is better)
Translates to: LRPSSSCCLPEA*DAYAQRELCVA
Trigger: AGCCACACAGAGCTCTCTTTGTGCATATGCATCCCAAGCTTCAGGAAGGCAACAGCTACTAGAGGGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CCA 72 bp TTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCTGACCAGCTCTTTAAT +
Preference number: 3 (lower is better)
Translates to: FGELSRATDQCE*LSPTAADQLFN
Trigger: ATTAAAGAGCTGGTCAGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCAAGTATCCTTCTGCGTaGGCAGGGCTGATGGGCGTA +
Preference number: 3 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGKYPSA*AGLMGV
Trigger: TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTT...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGAAAGTGGGTTTTCTCTaGGTAACTCCAGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQKVGFL*VTPGKL
Trigger: CAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTT...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGTCCTGCTCAGAATCTTaGACTCTCAGTCAGGGCCTT +
Preference number: 3 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKSCSES*TLSQGL
Trigger: AAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGA...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGTGACTTCAAAGCTTTaGAAGCCTCTATCCCCGCTG +
Preference number: 3 (lower is better)
Translates to: VRAFPTHYTVLERGYETHVTSKL*KPLSPL
Trigger: CAGCGGGGATAGAGGCTTCAAAAGCTTTGAAGTCAC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR GCA 72 bp GTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACATaGTCCTGTGCCCGTGCTTCTGGAAGAAGGTCACAC +
Preference number: 3 (lower is better)
Translates to: VSLPLVFSGPLT*SCARASGRRSH
Trigger: GTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CCA 72 bp AGAACCCAAGACCTTCATGTGTCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTCCTCCAAAGAGCTCTA +
Preference number: 3 (lower is better)
Translates to: RTQDLHVSGSWH*RKGRILLQRAL
Trigger: TAGAGCTCTTTGGAGGAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATGAAGGTCTTGGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp GCTGTAAGTTCCCCGATGGACATAACTGCATCTGCCTaGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGT +
Preference number: 3 (lower is better)
Translates to: AVSSPMDITASA*CAVVSLVSEQS
Trigger: ACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTATGTCCATCGGGGAACTTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCCACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 3 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATAAGTATCCTTCTGCGTaGGCAGGGCTGATGGGCGTA +
Preference number: 3 (lower is better)
Translates to: FTAAMQRTLASCRAQFENKYPSA*AGLMGV
Trigger: TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTT...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAAAGTGGGTTTTCTCTaGGTAACTCCAGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFKVGFL*VTPGKL
Trigger: CAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTT...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATCTTTTGTCCTTCCATTaGGATCATATTACCCAAGAG +
Preference number: 3 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDLLSFH*DHITQE
Trigger: CTCTTGGGTAATATGATCCAAATGGAAGGACAAAAG...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR GCA 72 bp GACCAAGAATCTGTCCTCAGGCCCTCTAGTAGCTGTTaGCTTCCTGAAGCTTGGGATGCATATGCACAAAGA +
Preference number: 3 (lower is better)
Translates to: DQESVLRPSSSC*LPEAWDAYAQR
Trigger: TCTTTGTGCATATGCATCCCAAGCTTCAGGAAGGCAACAGCTACTAGAGGGCCTGAGGACAGATTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CCA 72 bp CTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTaGGCAAGTCATTTAGTCTCACTGGGCTTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: LLVLALPWTVLP*ASHLVSLGFSF
Trigger: GAAACTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CCA 72 bp AAGCTTGGGATGCATATGCACAAAGAGAGCTCTGTGTaGCTCACAGATTGTGGACACCTGGTTGACCTCTTG +
Preference number: 3 (lower is better)
Translates to: KLGMHMHKESSV*LTDCGHLVDLL
Trigger: CAAGAGGTCAACCAGGTGTCCACAATCTGTGAGCCACACAGAGCTCTCTTTGTGCATATGCATCCCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 3 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQAHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR TCA 72 bp AGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCTTTaGCTCTCAGTCAGGGCCTTTCCCACTCACTATACT +
Preference number: 3 (lower is better)
Translates to: RQEEIMVPAQNL*LSVRAFPTHYT
Trigger: AGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCATGATCTCTTCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCCCCGTGCCTCTTCTTTaGCTAGGCTCGATTTTTGAG +
Preference number: 3 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIPVPLL*LGSIFE
Trigger: CTCAAAAATCGAGCCTAGCAAAAGAAGAGGCACGGG...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGT +
Preference number: 3 (lower is better)
Translates to: FTAAMQRTLASCRAQFENLCKEP*LPVERS
Trigger: ACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAG...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR-3UTR CAA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTATTACCCAAGAGGCCTaGAGACAAATGATGTCATCT +
Preference number: 3 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFITQEA*RQMMSS
Trigger: AGATGACATCATTTGTCTCAAGGCCTCTTGGGTAAT...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR-3UTR CAA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACAGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAA +
Preference number: 3 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTVEGPT*LSGCGQ
Trigger: TTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGAC...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGTCCTGCTCAGAATCTTaGACTCTCAGTCAGGGCCTT +
Preference number: 3 (lower is better)
Translates to: KEPLLPVERSSKITDAELSCSES*TLSQGL
Trigger: AAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGA...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAGAGAGGAAAAGTGTCTaGCTCAAGTCACATACTAGG +
Preference number: 3 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIERKSV*LKSHTR
Trigger: CCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTC...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGCTCACCATACTGGTTaGGTTTATAGAAGAAATCTC +
Preference number: 3 (lower is better)
Translates to: VRAFPTHYTVLERGYETHAHHTG*VYRRNL
Trigger: GAGATTTCTTCTATAAACCAAACCAGTATGGTGAGC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421415.5
3UTR CCA 72 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATaGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGG +
Preference number: 3 (lower is better)
Translates to: SCSSHILGRKRS*FLLRIFDSQSG
Trigger: CCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCGAGAGGAAAAGTGTCTaGCTCAAGTCACATACTAGG +
Preference number: 3 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIERKSV*LKSHTR
Trigger: CCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTC...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR-3UTR CAA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTACTGACACTGAACTTTaGTCCTTCCATTTGGATCAT +
Preference number: 3 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCTDTEL*SFHLDH
Trigger: ATGATCCAAATGGAAGGACAAAAGTTCAGTGTCAGT...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR GCA 72 bp CCCGGCCCAGTAACAATCTTTATACACATCTCTGGTTaGACTCATGTGTCACACACAACCTTTACCACAATC +
Preference number: 3 (lower is better)
Translates to: PGPVTIFIHISG*THVSHTTFTTI
Trigger: GATTGTGGTAAAGGTTGTGTGTGACACATGAGTGCAACCAGAGATGTGTATAAAGATTGTTACTGGGCCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR-3UTR CAA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTCACCATACTGGTTaGGTTTATAGAAGAAATCTC +
Preference number: 3 (lower is better)
Translates to: LEATDQSDKSLVILIVCDAHHTG*VYRRNL
Trigger: GAGATTTCTTCTATAAACCAAACCAGTATGGTGAGC...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
3UTR GCA 72 bp TCTATATTGGTACATGCGGATGGAGTTCACTTTAATTaGTGTATCTACAGGCAGTTTTTAATTCCTTGCTAT +
Preference number: 3 (lower is better)
Translates to: SILVHADGVHFN*CIYRQFLIPCY
Trigger: ATAGCAAGGAATTAAAAACTGCCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGTGGGGGCCAGGCCCGTaGCCGCAGCCAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQWGPGP*PQPARG
Trigger: TCCTCTTGCTGGCTGCGGGCACGGGCCTGGCCCCCA...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGTGGGGGCCAGGCCCGTaGCCGCAGCCAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLWGPGP*PQPARG
Trigger: TCCTCTTGCTGGCTGCGGGCACGGGCCTGGCCCCCA...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGCCGCTGGCAGTGGTGTaGCCCTGGGCTCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQPLAVV*PWALPR
Trigger: TCTAGGGAGAGCCCAGGGGCACACCACTGCCAGCGG...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGCCGCTGGCAGTGGTGTaGCCCTGGGCTCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGPLAVV*PWALPR
Trigger: TCTAGGGAGAGCCCAGGGGCACACCACTGCCAGCGG...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGGCAGGCTCCTGTCCTTaGTGGCTTGGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLAGSCP*WLGLPP
Trigger: GGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGC...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCCGTAGGATGAGGTGCTaGCCGGGCCGCAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSRRMRC*PGRRPS
Trigger: GCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACG...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287899.13
ENST00000528287.5
CDS-3UTR CCA 90 bp TTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCCGCAGGTTCCTGGGGTGGGTaGACCGTGATCGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LSVMLCRIGTMGARPVPAGSWGG*TVIGSR
Trigger: GCGGCTGCCGATCACGGTCCACCCACCCCAGGAACC...TGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGGCAGTGGTGTGCCCCTaGGCTCTCCCTAGACTAGGC +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGAVVCP*ALPRLG
Trigger: GCCTAGTCTAGGGAGAGCCCAGGGGCACACCACTGC...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGGTCAAACACACAGGGTaGGCAGCCACTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGVKHTG*AATAAA
Trigger: TGCTGCGGCAGTGGCTGCTCACCCTGTGTGTTTGAC...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGNPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGAGGGTGAGCAGCCACTaGCGCAGCACTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLRVSSH*RSTGKA
Trigger: TGCCTTCCCAGTGCTGCGGCAGTGGCTGCTCACCCT...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTGCTAGCCCAAGCTGGTaGAGCACGCTAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGASPSW*STLEPR
Trigger: CCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGC...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGCTGGCCCTACTCGCCTaGGCTTCACCTCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLLALLA*ASPHVR
Trigger: CCTCACGTGAGGTGAAGCGCAGGCGAGTAGGGCCAG...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTGGCCCTACTCGCCTaGGCTTCACCTCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGLALLA*ASPHVR
Trigger: CCTCACGTGAGGTGAAGCGCAGGCGAGTAGGGCCAG...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGCCACTGCCGCAGCACTaGGAAGGCAAGGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGPLPQH*EGKGSV
Trigger: CACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGG...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCGGCTCCTGTCCTTGCTaGCTTGGGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSGSCPC*LGLPPT
Trigger: GGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCC...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACGGCCACGAAGGTCTCTaGGTTCAGCTTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDGHEGL*VQLGGA
Trigger: TGCCCCTCCAAGCTGAACCCAGAGACCTTCGTGGCC...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287899.13
ENST00000528287.5
CDS-3UTR CCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGGTTCCTGGGGTGGGTaGACCGTGATCGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPGSWGG*TVIGSR
Trigger: GCGGCTGCCGATCACGGTCCACCCACCCCAGGAACC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCCGCAGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: LSVMLCRIGTMGARPVPAARFLG*VDRDRQ
Trigger: CTGCCGATCACGGTCCACCCACCCCAGGAACCTGGC...TGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGGGTCTGGTCTCAGCGTaGAGGTGGCATGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGGLVSA*RWHGDW
Trigger: CCAGTCTCCATGCCACCTCCACGCTGAGACCAGACC...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGCAGGCTCCTGTCCTTaGTGGCTTGGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPAGSCP*WLGLPP
Trigger: GGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGTCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQSRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCAGGCAATCTGCCTaGCGCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGLRQSA*RSLPKC
Trigger: GCACTTTGGGAGGCTGCGGCAGGCAGATTGCCTGAG...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGATGGGGGCCAGGCCCGTaGCCGCAGCCAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRWGPGP*PQPARG
Trigger: TCCTCTTGCTGGCTGCGGGCACGGGCCTGGCCCCCA...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGCACGGGCGCAGGCCCTaGTCCTTGGCCAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLHGRRP*SLASIL
Trigger: CAAAATGCTGGCCAAGGAGCAGGGCCTGCGCCCGTG...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAGGTCACCTGGCAAATaGGCAGCAGGACCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLRSPGK*AAGPGL
Trigger: CAGGCCTGGTCCTGCTGCTCATTTGCCAGGTGACCT...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCCGCACTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LSVMLCRIGTMGARPVPALKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...TGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGCCACTGCCGCAGCACTaGGAAGGCAAGGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLPLPQH*EGKGSV
Trigger: CACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGG...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGCGTAGGATGAGGTGCTaGCCGGGCCGCAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAERRMRC*PGRRPS
Trigger: GCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACG...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAGGTTCCTGGGGTGGGTaGACCGTGATCGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRGSWGG*TVIGSR
Trigger: GCGGCTGCCGATCACGGTCCACCCACCCCAGGAACC...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTCATTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCGGGGCACTGGGTTCCTaGGATAGGGGTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LIVCDALQDRHHGGQARAGALGS*DRGARF
Trigger: GAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCC...GGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTGCTGGCTCTGCCATaGACTGTTTTACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQVLALP*TVLPWA
Trigger: TGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCAC...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACATTAGCCAAGCGTGGTaGTGCACGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDISQAW*CTPVVP
Trigger: TGGGACTACAGGCGTGCACCACCACGCTTGGCTAAT...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR TCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGCTATCCCTCGTAGGATaGGGTGCTGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLLSLVG*GAGRAA
Trigger: TGCGGCCCGGCCAGCACCTCATCCTACGAGGGATAG...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPNPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGGCCTGTGAGGCGGTCTaGAACCTCCAGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEACEAV*NLQHHP
Trigger: GGGGTGGTGCTGGAGGTTTCAGACCGCCTCACAGGC...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTAACATGTTTGGAGCCTaGGAGGTGGGTGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGNMFGA*EVGVSG
Trigger: CCCACTCACACCCACCTCTCAGGCTCCAAACATGTT...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTAGCCTCTCTGCTCACTaGCCAAGCTGGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGSLSAH*PSWSGR
Trigger: TCTTCCACTCCAGCTTGGTCAGTGAGCAGAGAGGCT...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATACAGGCCAGGCTCTATaGGACCACGGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDTGQAL*DHGRRP
Trigger: GGGCCTGCGCCCGTGGTCTCATAGAGCCTGGCCTGT...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGTCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQSDSSL*SFLGPS
Trigger: ACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGA...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGTCGAGGGCCCCACCTTaGTCTCAGGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLSRAPP*SQDVVK
Trigger: CTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGA...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTACTCAGGCAATCTGCCTaGCGCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLLRQSA*RSLPKC
Trigger: GCACTTTGGGAGGCTGCGGCAGGCAGATTGCCTGAG...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGTDQCE*LSPTAA
Trigger: AGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGT...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTGGCTCAGCCTGGACTTaGCTTCCTCTGAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGGSAWT*LPLKSP
Trigger: AGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCC...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGAAAATGCAGCTGCTCTaGTTGAAGGGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGKMQLL*LKGVLG
Trigger: CCCCAGTACCCCCTTCAACCAGAGCAGCTGCATTTT...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGCAGACCTCAGAGGCCTaGGGAGAGGAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQQTSEA*GEEKCL
Trigger: AAGACACTTTTCCTCTCCCCAGGCCTCTGAGGTCTG...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGAGGGAGAGGAAAGGGTaGAGGAAAACTCGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQRERKG*RKTRRP
Trigger: AGGTCTGCGAGTTTTCCTCCACCCTTTCCTCTCCCT...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAAGCCTCTATCCCCGCTaGCAGTGGTGTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRSLYPR*QWCAPG
Trigger: CCCAGGGGCACACCACTGCCAGCGGGGATAGAGGCT...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACCAGGGAAGCTGCTCTaGGGAGCTCTCCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRPGKLL*GALLVW
Trigger: CCAAACCAGGAGAGCTCCTCAGAGCAGCTTCCCTGG...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp GTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCAGGTCACCTGGCAAATaGGCAGCAGGACCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VLLFPWCLNRVRLLTGPRRSPGK*AAGPGL
Trigger: CAGGCCTGGTCCTGCTGCTCATTTGCCAGGTGACCT...GCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTACCTCATGGGGCAGATaGGAAGTAGAGGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGTSWGR*EVEVLS
Trigger: GCTCAGAACCTCTACTTCTCATCTGCCCCATGAGGT...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAAGGGTGAGCAGCCACTaGCGCAGCACTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRRVSSH*RSTGKA
Trigger: TGCCTTCCCAGTGCTGCGGCAGTGGCTGCTCACCCT...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTGCAGGCTCCTGTCCTTaGTGGCTTGGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSAGSCP*WLGLPP
Trigger: GGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGC...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTGACTCCCAGGCTGGTTaGTCACCTCCTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSDSQAG*SPPQGP
Trigger: GGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTC...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGCCCGTGCCCGCAGCCAGCAAGAGGAGCTCACCATACTGGTTTGGTTTATAGAGACTCCCAGGCTGGTTaGTCACCTCCTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GPCPQPARGAHHTGLVYRDSQAG*SPPQGP
Trigger: GGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTC...TCTATAAACCAAACCAGTATGGTGAGCTCCTCTTGCTGGCTGCGGGCACGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACACACACAGTACTCCATaGTCTCTGACCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDTHSTP*SLTLEL
Trigger: GAGTTCCAGGGTCAGAGAGCATGGAGTACTGTGTGT...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCATGGGCCGGCCCTCATaGTCACATGCAGATGACACT +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSMGRPS*SHADDT
Trigger: AGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCAT...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp AGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCATACCGTAGGATGAGGTaGTGGCCGGGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RPAHSKHLAMSLVNSAEPYRRMR*WPGRRP
Trigger: TGGCCTGCGGCCCGGCCAGCACCTCATCCTACGGTA...TGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528287.5
CDS-3UTR CCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCGGCTCCTGTCCTTGCTaGCTTGGGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLGSCPC*LGLPPT
Trigger: GGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCC...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGGCTCCTGTCCTTGCTaGCTTGGGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQGSCPC*LGLPPT
Trigger: GGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCC...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCTCCTGGGGCTCAGCCTaGACTTGGCTTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPSWGSA*TWLPLK
Trigger: CTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGA...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQARFLG*VDRDRQ
Trigger: CTGCCGATCACGGTCCACCCACCCCAGGAACCTGGC...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATC +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSGVPGS*GGWTVI
Trigger: GATCACGGTCCACCCACCCCAGGAACCTGGCACCCC...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GCTGCTCTGGTTGAAGGGGGTACTGGGGATCCATCTGGAGCTGTCCTTTCACTGGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATC +
Preference number: 4 (lower is better)
Translates to: AALVEGGTGDPSGAVLSLGVPGS*GGWTVI
Trigger: GATCACGGTCCACCCACCCCAGGAACCTGGCACCCC...CAGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGGCTGCCCAGGGGCACTaGGTTCCTGGGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMAAQGH*VPGIGV
Trigger: CACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGAGTAGCTAGCCCAAGCTaGTGCAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRVASPS*CSTLEP
Trigger: GGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTAC...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGGTGCTGGCTCTGCCATaGACTGTTTTACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLVLALP*TVLPWA
Trigger: TGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCAC...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GCTGCTCTGGTTGAAGGGGGTACTGGGGATCCATCTGGAGCTGTCCTTTCACTGTATCCCCGCTGGCAGTaGTGTGCCCCTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AALVEGGTGDPSGAVLSLYPRWQ*CAPGLS
Trigger: GGAGAGCCCAGGGGCACACCACTGCCAGCGGGGATA...CAGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTAGGGTTTTGTCATGTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGRVLSC*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAACATGACAAAACCCT...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGCAGCTGACCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ELSRATDQCEWLSPTAADLKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...GTCAGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRNPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCCAGCTCCAAGAGGTCTaGACTCACACACCACACCCC +
Preference number: 4 (lower is better)
Translates to: VLLFPWCLNRVRLLTGPRQLQEV*THTPHP
Trigger: GGGGTGTGGTGTGTGAGTTCAGACCTCTTGGAGCTG...GCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGTTCAAAGTATCCTTCTaGGTTGGCAGGGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLFKVSF*VGRADG
Trigger: CCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAA...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGCAGAATTCATTAACTaGAGTGCGCTGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPAEFIN*SALPRG
Trigger: GCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGCTAGCCCAAGCTGGTaGAGCACGCTAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQASPSW*STLEPR
Trigger: CCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGC...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GCTGCTCTGGTTGAAGGGGGTACTGGGGATCCATCTGGAGCTGTCCTTTCACTGGCTAGCCCAAGCTGGTaGAGCACGCTAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AALVEGGTGDPSGAVLSLASPSW*STLEPR
Trigger: CCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGC...CAGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGACTCTCCCAGCACCCTaGACTTACCTTTTCATGACA +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQTLPAP*TYLFMT
Trigger: TGTCATGAAAAGGTAAGTGCAGGGTGCTGGGAGAGT...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAARFLG*VDRDRQ
Trigger: CTGCCGATCACGGTCCACCCACCCCAGGAACCTGGC...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTCATTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCGTGCTGGCTCTGCCATaGACTGTTTTACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LIVCDALQDRHHGGQARAVLALP*TVLPWA
Trigger: TGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCAC...GGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGTGCTGGCTCTGCCATaGACTGTTTTACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPVLALP*TVLPWA
Trigger: TGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCAC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GTTAGGGGTACAATGGGCCGGCCCTCATGCTCACATGCAGATGACACTTATGGGTATCCCCGCTGGCAGTaGTGTGCCCCTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VRGTMGRPSCSHADDTYGYPRWQ*CAPGLS
Trigger: GGAGAGCCCAGGGGCACACCACTGCCAGCGGGGATA...CCCATAAGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCATTGTACCCCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGGGTGTGAGTGGGCGGTaGCATACAAAAAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLGVSGR*HTKSLE
Trigger: CTCCAGACTTTTTGTATGCCACCGCCCACTCACACC...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCACTATGTTGCCAGTCTaGTCTCGAACTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSTMLPV*SRTPGL
Trigger: GAGGCCAGGAGTTCGAGACCAGACTGGCAACATAGT...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
3UTR CAA 72 bp CTCAAGTTTCCAGGCGACAGGAGCCCTTTAGGCTTCTaGGCACCAAGGGCACGGCTGGGTCCCCACCAATGT +
Preference number: 4 (lower is better)
Translates to: LKFPGDRSPLGF*APRARLGPHQC
Trigger: ACATTGGTGGGGACCCAGCCGTGCCCTTGGTGCCAAGAAGCCTAAAGGGCTCCTGTCGCCTGGAAACTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGGTCAAACACACAGGGTaGGCAGCCACTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMVKHTG*AATAAA
Trigger: TGCTGCGGCAGTGGCTGCTCACCCTGTGTGTTTGAC...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCGCCTGTCCATGGCAATaGTGCAGAAGGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSACPWQ*CRRPRR
Trigger: CCTTCGTGGCCTTCTGCATCATTGCCATGGACAGGC...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287899.13
ENST00000528287.5
CDS-3UTR TCA 90 bp CTCATTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCACCTCATGGGGCAGATaGGAAGTAGAGGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LIVCDALQDRHHGGQARATSWGR*EVEVLS
Trigger: GCTCAGAACCTCTACTTCTCATCTGCCCCATGAGGT...GGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSLKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGACAGAGTCAGGCTCCTaGCAGGCCCCCGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQTESGS*QAPAIW
Trigger: CCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGT...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGCAGCTGACTCTACTATCCCTCTGTaGCTCTGGCCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ELSRATDQCEWLSPTAADSTIPL*LWPTQQ
Trigger: CTGCTGCGTGGGCCAGAGTCACAGAGGGATAGTAGA...GTCAGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCCCAGGGAAGCTGCTCTaGGGAGCTCTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFPGKLL*GALLAE
Trigger: CTCAGCCAGGAGAGCTCCTCAGAGCAGCTTCCCTGG...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGCCAGGGAAGCTGCTCTaGGGAGCTCTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQPGKLL*GALLAE
Trigger: CTCAGCCAGGAGAGCTCCTCAGAGCAGCTTCCCTGG...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGATCTGTGGGCCGTAGCTaGATCCAGGCTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRSVGRS*IQASSV
Trigger: CACTGAGGAAGCCTGGATGCAGCTACGGCCCACAGA...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTTCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLDLASSEESSLTPRLVSRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCCGCATTCCAGAAACGGGCCTaGTCTTGGAGGAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSVMLCRIGTMGARPVPAFQKRA*SWRKVF
Trigger: GAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAA...TGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGAGCTCTCCTGGCTGAGTACAAAGAAGGTACGGACATTCCAGAAACGGGCCTGCACGGGCGCAGGCCCTaGTCCTTGGCCAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: GALLAEYKEGTDIPETGLHGRRP*SLASIL
Trigger: CAAAATGCTGGCCAAGGAGCAGGGCCTGCGCCCGTG...CAGGCCCGTTTCTGGAATGTCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGAAGGCAAGGGTTCTGTaGGCCGTAGCTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEKARVL*AVAASR
Trigger: CCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTT...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTAAGGCAAGGGTTCTGTaGGCCGTAGCTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LSLDLASSEESSLTPRLVKARVL*AVAASR
Trigger: CCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTT...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCCGCATCTTTAATTAGGTCCTaGCCCAGGTGGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSVMLCRIGTMGARPVPASLIRS*PRWPKW
Trigger: CCACTTTGGCCACCTGGGCCAGGACCTAATTAAAGA...TGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCAACTCCTACTCCTCCTaGGGCTCAGCCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSNSYSS*GSAWTW
Trigger: CCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTT...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSLSGTS*ERDPGL
Trigger: GAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAG...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATCTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDLSGTS*ERDPGL
Trigger: GAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAG...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCGGGGCACTGGGTTCCTaGGATAGGGGTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFGALGS*DRGARF
Trigger: GAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCC...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTCATTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCAAAATGCAGCTGCTCTaGTTGAAGGGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: LIVCDALQDRHHGGQARAKMQLL*LKGVLG
Trigger: CCCCAGTACCCCCTTCAACCAGAGCAGCTGCATTTT...GGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCCTGTGCCCGTGCTTCTaGAAGAAGGTCACACACAGT +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPLCPCF*KKVTHS
Trigger: ACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAG...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCTATCCCCGCTGGCAGTaGTGTGCCCCTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERYPRWQ*CAPGLS
Trigger: GGAGAGCCCAGGGGCACACCACTGCCAGCGGGGATA...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGCCTCTATCCCCGCTaGCAGTGGTGTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERSLYPR*QWCAPG
Trigger: CCCAGGGGCACACCACTGCCAGCGGGGATAGAGGCT...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGACTGACCAAGCTGGAGTaGAAGAGACAGGCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRLTKLE*KRQARL
Trigger: GAGCCTCGCCTGTCTCTTCCACTCCAGCTTGGTCAG...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCTGAAGAGTCCTCCCTaGCTCCCAGGCTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTLKSPP*LPGWLL
Trigger: GAGCAACCAGCCTGGGAGTCAGGGAGGACTCTTCAG...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTCTACTATCCCTCTGTaGCTCTGGCCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMSTIPL*LWPTQQ
Trigger: CTGCTGCGTGGGCCAGAGTCACAGAGGGATAGTAGA...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGGGCAGAAGAATTGCTTaGGCCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEGRRIA*AWEAEV
Trigger: AACCTCTGCCTCCCAGGCTCAAGCAATTCTTCTGCC...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR TCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGACAGGCCAGGCTCTATaGGACCACGGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQTGQAL*DHGRRP
Trigger: GGGCCTGCGCCCGTGGTCTCATAGAGCCTGGCCTGT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCGCGCTTCACCTCACGTaGGGATTTTCCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSALHLT*GFSRFL
Trigger: GAGGAACCTGGAAAATCCTCACGTGAGGTGAAGCGC...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528287.5
CDS-3UTR GCA 90 bp TCCTGGCTGAGTACAAAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTTGGAGGGTGAGCAGCCACTaGCGCAGCACTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SWLSTKKVRTFQKRACSWRVSSH*RSTGKA
Trigger: TGCCTTCCCAGTGCTGCGGCAGTGGCTGCTCACCCT...CCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTTTGTACTCAGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTGGCTGCCTCCCACCTTaGCAGATCTCGGTGATAGAG +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSGCLPP*QISVIE
Trigger: CTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCC...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGCCTCGTAGGATGAGGTaGTGGCCGGGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQPRRMR*WPGRRP
Trigger: TGGCCTGCGGCCCGGCCAGCACCTCATCCTACGAGG...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp GTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VLLFPWCLNRVRLLTGPRSDSSL*SFLGPS
Trigger: ACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGA...GCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGTCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQSRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGRSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCTTAACTGCAGTGCGCTaGCCAGGGGCACTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFLTAVR*PGALGS
Trigger: GGAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAA...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTAACACACAGTACTCCATaGTCTCTGACCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLTHSTP*SLTLEL
Trigger: GAGTTCCAGGGTCAGAGAGCATGGAGTACTGTGTGT...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp GTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCCCCGATGGACATAACTaGATCTGCCTGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VLLFPWCLNRVRLLTGPRPDGHN*ICLVCC
Trigger: ACAGCACACCAGGCAGATGCAGTTATGTCCATCGGG...GCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGCTCAGGCAATCTGCCTaGCGCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSALRQSA*RSLPKC
Trigger: GCACTTTGGGAGGCTGCGGCAGGCAGATTGCCTGAG...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLVCAPS*VPVAGS
Trigger: TGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGAC...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGTCCTGGGGCTCAGCCTaGACTTGGCTTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQSWGSA*TWLPLK
Trigger: CTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGA...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GCTGCTCTGGTTGAAGGGGGTACTGGGGATCCATCTGGAGCTGTCCTTTCACTGAACTCCTACTCCTCCTaGGGCTCAGCCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: AALVEGGTGDPSGAVLSLNSYSS*GSAWTW
Trigger: CCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTT...CAGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGCTGGCCTCGAACTTCTaGGCTCAGGCAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQLASNF*AQAICL
Trigger: CAGGCAGATTGCCTGAGCCCAGAAGTTCGAGGCCAG...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCCAGGCTGGAGCGCAGTaGCACAATCTTGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFQAGAQ*HNLGSL
Trigger: CAGGGAGCCAAGATTGTGCCACTGCGCTCCAGCCTG...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAGGAGGGGCAGCTCTGTaGCTCTGGCCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIGGAAL*LWPTQQ
Trigger: CTGCTGCGTGGGCCAGAGTCACAGAGCTGCCCCTCC...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTTGGCTATGTCTTTGGTaGACTCAGCCGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LSLDLASSEESSLTPRLVWLCLW*TQPSHR
Trigger: TCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCA...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGGCTATGTCTTTGGTaGACTCAGCCGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSWLCLW*TQPSHR
Trigger: TCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCA...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSAGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTGCCTGTGAGGCGGTCTaGAACCTCCAGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCACEAV*NLQHHP
Trigger: GGGGTGGTGCTGGAGGTTTCAGACCGCCTCACAGGC...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCCTGGAACTCTGCCTGTaGGGCGGTCTGAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFLELCL*GGLKPP
Trigger: TGGAGGTTTCAGACCGCCTCACAGGCAGAGTTCCAG...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACCTGGAACTCTGCCTGTaGGGCGGTCTGAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDLELCL*GGLKPP
Trigger: TGGAGGTTTCAGACCGCCTCACAGGCAGAGTTCCAG...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCCCCGCTATTTGGAGCTaGGTCAATAGGATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPPAIWS*VNRMCK
Trigger: TTTGCACATCCTATTGACTCAGCTCCAAATAGCGGG...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGGGCTGCCTCCCACCTTaGCAGATCTCGGTGATAGAG +
Preference number: 4 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQGCLPP*QISVIE
Trigger: CTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCC...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGGCTGCCTCCCACCTTaGCAGATCTCGGTGATAGAG +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAGCLPP*QISVIE
Trigger: CTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCC...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCCGAGCCACAGACCAGTaGGAATGGCTTTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLRATDQ*EWLSPT
Trigger: TGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCG...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCGAGCCACAGACCAGTaGGAATGGCTTTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMRATDQ*EWLSPT
Trigger: TGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCG...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGTCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLSDSSL*SFLGPS
Trigger: ACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGA...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAGACTCCCAGGCTGGTTaGTCACCTCCTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGDSQAG*SPPQGP
Trigger: GGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTC...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTTCGAGGGCCCCACCTTaGTCTCAGGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLSRAPP*SQDVVK
Trigger: CTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGA...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCAGAATTCATTAACTaGAGTGCGCTGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDAEFIN*SALPRG
Trigger: GCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCCTTTCACTGCTGCTATaGAAAGAACCCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSLSLLL*KEPLLP
Trigger: AGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAG...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCGAGCTGTCCTTTCACTaGTGCTATGCAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPELSFH*CYAKNP
Trigger: AGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTC...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGCATCTGCCTGGTGTaGTGTTGTTTCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSCICLV*CCFPGV
Trigger: GACACCAGGGAAACAACAGCACACCAGGCAGATGCA...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCAAGGCAAGGGTTCTGTaGGCCGTAGCTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFKARVL*AVAASR
Trigger: CCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTT...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAETDQCE*LSPTAA
Trigger: AGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGT...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGTCCTGGGGCTCAGCCTaGACTTGGCTTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQSWGSA*TWLPLK
Trigger: CTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGA...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCTCCTGGGGCTCAGCCTaGACTTGGCTTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFSWGSA*TWLPLK
Trigger: CTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGA...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTAACTCCTACTCCTCCTaGGGCTCAGCCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLNSYSS*GSAWTW
Trigger: CCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTT...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGCAGCTGACTCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: ELSRATDQCEWLSPTAADSGSWH*RKGRIL
Trigger: GAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGA...GTCAGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCGCCAGGTTCCTGGGGTaGGTGGACCGTGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGARFLG*VDRDRQ
Trigger: CTGCCGATCACGGTCCACCCACCCCAGGAACCTGGC...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGGGGCACTGGGTTCCTaGGATAGGGGTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VRAFPTHYTVLERGYETHGALGS*DRGARF
Trigger: GAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTGCCCAGGGGCACTaGGTTCCTGGGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQAAQGH*VPGIGV
Trigger: CACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCGGCAGGAAGAGATCATaGTTCCTGCTCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSGRKRS*FLLRIF
Trigger: AAAGATTCTGAGCAGGAACCATGATCTCTTCCTGCC...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCCTGGCCTCGAACTTCTaGGCTCAGGCAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSALASNF*AQAICL
Trigger: CAGGCAGATTGCCTGAGCCCAGAAGTTCGAGGCCAG...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTTGGGGAAAACTGGTCTaGTCTCAGCGTGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SHDKRCHQQPGCTEPTRSWGKLV*SQRGGG
Trigger: GCCACCTCCACGCTGAGACCAGACCAGTTTTCCCCA...ACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGTGTGGGGAAAACTaGTCTGGTCTCAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDVCGEN*SGLSVE
Trigger: CTCCACGCTGAGACCAGACCAGTTTTCCCCACACAC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGACCACAATCACATGCTaGAACTTGTGTATCCCTACA +
Preference number: 4 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLTTITC*NLCIPT
Trigger: TGTAGGGATACACAAGTTCCAGCATGTGATTGTGGT...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGCTTTATACACATCTCTaGTTGCACTCATGTGTCACA +
Preference number: 4 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQLYTHL*LHSCVT
Trigger: TGTGACACATGAGTGCAACCAGAGATGTGTATAAAG...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp GAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTGGAGGGGCAGCTCTGTaGCTCTGGCCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EATDQSDKSLVILIVCDAGGAAL*LWPTQQ
Trigger: CTGCTGCGTGGGCCAGAGTCACAGAGCTGCCCCTCC...AGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528287.5
CDS-3UTR TCA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACCTGCGTTGGCAGGGCTaGTGGGCGTATAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VRAFPTHYTVLERGYETHLRWQG*WAYRLS
Trigger: AGAGAGCCTATACGCCCATCAGCCCTGCCAACGCAG...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTTGGCTATGTCTTTGGTaGACTCAGCCGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSWLCLW*TQPSHR
Trigger: TCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCA...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp AGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCATGGCTATGTCTTTGGTaGACTCAGCCGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: RPAHSKHLAMSLVNSAEPWLCLW*TQPSHR
Trigger: TCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCA...TGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GGAGCTCTCCTGGCTGAGTACAAAGAAGGTACGGACATTCCAGAAACGGGCCTGAATAGGAGTCCTCAGTaGGGCCTGCGCACAGTAAGC +
Preference number: 4 (lower is better)
Translates to: GALLAEYKEGTDIPETGLNRSPQ*GLRTVS
Trigger: GCTTACTGTGCGCAGGCCTCACTGAGGACTCCTATT...CAGGCCCGTTTCTGGAATGTCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp AAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTTGGAGGAAGGTTTTCAGGAGGTCACCTGGCAAATaGGCAGCAGGACCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KKVRTFQKRACSWRKVFRRSPGK*AAGPGL
Trigger: CAGGCCTGGTCCTGCTGCTCATTTGCCAGGTGACCT...CCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTACATCCAGGAAGTGCTaGGCATCCTCCCCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLTSRKC*ASSPVR
Trigger: CCTAACAGGGGAGGATGCTCAGCACTTCCTGGATGT...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGAGGAGCTCTCCTGGCTaGGTACAAAGAAGGTACGGA +
Preference number: 4 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMRSSPG*VQRRYG
Trigger: TCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCCT...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGACCAGGGAAGCTGCTCTaGGGAGCTCTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGPGKLL*GALLAE
Trigger: CTCAGCCAGGAGAGCTCCTCAGAGCAGCTTCCCTGG...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTTTCAAAGTATCCTTCTaGGTTGGCAGGGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: LSLDLASSEESSLTPRLVFKVSF*VGRADG
Trigger: CCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAA...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGATTTAACATGCTCCTGTaGCCGTGCTTCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRFNMLL*PCFWKK
Trigger: CTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAA...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCCCGATGGACATAACTaGATCTGCCTGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSPDGHN*ICLVCC
Trigger: ACAGCACACCAGGCAGATGCAGTTATGTCCATCGGG...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGAACTCTCCCAGCACCCTaGACTTACCTTTTCATGACA +
Preference number: 4 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRTLPAP*TYLFMT
Trigger: TGTCATGAAAAGGTAAGTGCAGGGTGCTGGGAGAGT...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATTTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGG +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDLSVML*RIGTMG
Trigger: CCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTGGCTCCTGTCCTTGCTaGCTTGGGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQAGSCPC*LGLPPT
Trigger: GGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCC...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACAGGTCCTGGCCCAGGTaGCCAAAGTGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDRSWPR*PKWVFS
Trigger: AGAGAAAACCCACTTTGGCCACCTGGGCCAGGACCT...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDTDQCE*LSPTAA
Trigger: AGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGT...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGCCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATGGTTCCTGGGGTGGGTaGACCGTGATCGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENGSWGG*TVIGSR
Trigger: GCGGCTGCCGATCACGGTCCACCCACCCCAGGAACC...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTGGGGCACTGGGTTCCTaGGATAGGGGTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCGALGS*DRGARF
Trigger: GAACCTGGCACCCCTATCCCAGGAACCCAGTGCCCC...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTGTAGCTAGCCCAAGCTaGTGCAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFVASPS*CSTLEP
Trigger: GGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTAC...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTACTGGGGATCCATCTaGAGCTGTCCTTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSYWGSI*SCPFTA
Trigger: AGCAGTGAAAGGACAGCTCCAGATGGATCCCCAGTA...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATAGGGAGAGGAAAGGGTaGAGGAAAACTCGCAGACCT +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDRERKG*RKTRRP
Trigger: AGGTCTGCGAGTTTTCCTCCACCCTTTCCTCTCCCT...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAGTGCTGTTGTTTCCCTaGTGTCTGAACAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRVLLFP*CLNRVR
Trigger: CCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGAGCCTCCAAAGTAGCTaGGACTACAGGCGCATACCA +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQSLQSS*DYRRIP
Trigger: TGGTATGCGCCTGTAGTCCCAGCTACTTTGGAGGCT...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTTACAACATCACACGGTaGCCACGCCTCCCACAACAC +
Preference number: 4 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLYNITR*PRLPQH
Trigger: GTGTTGTGGGAGGCGTGGCCACCGTGTGATGTTGTA...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGCGTGGAGGTGGCATaGAGACTGGGAGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFSVEVA*RLGAGR
Trigger: TCTCCCAGCTCCCAGTCTCCATGCCACCTCCACGCT...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTGGCATACAAAAAGTCTaGAGAGGTGGCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSLDLASSEESSLTPRLVGIQKV*RGGRAE
Trigger: CTCTGCTCTGCCACCTCTCCAGACTTTTTGTATGCC...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAATAAACCTAGTACTTTaGGAGGCCAAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRINLVL*EAKVGG
Trigger: TCCGCCCACCTTGGCCTCCCAAAGTACTAGGTTTAT...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR CCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCGCAGGCCCTGCTCCTTaGCCAGCATTTTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFAGPAP*PAFCRD
Trigger: GTCTCTACAAAATGCTGGCCAAGGAGCAGGGCCTGC...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
3UTR CAA 72 bp GCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: AWGQYKTVEGPT*LSGCGQVIEPK
Trigger: CTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGAGGTCACCTGGCAAATaGGCAGCAGGACCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQRSPGK*AAGPGL
Trigger: CAGGCCTGGTCCTGCTGCTCATTTGCCAGGTGACCT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTTCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 4 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGSALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCCCTGCTCAGAATCTTTaGCTCTCAGTCAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLPAQNL*LSVRAF
Trigger: AAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGG...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTACAGAGTCAGGCTCCTaGCAGGCCCCCGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCTESGS*QAPAIW
Trigger: CCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGT...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGAAACATGGTGAGGGCTaGACTAAAGCCAATGCCGCT +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQKHGEG*TKANAA
Trigger: AGCGGCATTGGCTTTAGTTCAGCCCTCACCATGTTT...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACAGGAGCTCTCCTGGCTaGGTACAAAGAAGGTACGGA +
Preference number: 4 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDRSSPG*VQRRYG
Trigger: TCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCCT...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTGAGTGTACCGTAGGATaGGGTGCTGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EATDQSDKSLVILIVCDAECTVG*GAGRAA
Trigger: TGCGGCCCGGCCAGCACCTCATCCTACGGTACACTC...AGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528287.5
CDS-3UTR GCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAAGGGTGAGCAGCCACTaGCGCAGCACTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIRVSSH*RSTGKA
Trigger: TGCCTTCCCAGTGCTGCGGCAGTGGCTGCTCACCCT...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGACTGTCCTTTCACTGCTaGTATGCAAAGAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRLSFHC*YAKNPC
Trigger: GCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAG...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGCTGTCCTTTCACTGCTaGTATGCAAAGAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLLSFHC*YAKNPC
Trigger: GCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAG...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGTGCATCTGCCTGGTGTaGTGTTGTTTCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSACICLV*CCFPGV
Trigger: GACACCAGGGAAACAACAGCACACCAGGCAGATGCA...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CCCCTGCCCAACTCCTACTCCTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGTTTACCACAATCACATaGTGGAACTTGTGTATCCCT +
Preference number: 4 (lower is better)
Translates to: PLPNSYSSWGSAWTWLPLFTTIT*WNLCIP
Trigger: AGGGATACACAAGTTCCAGCATGTGATTGTGGTAAA...CAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTTGGGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAGCCATCTGGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIAIWAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCCAGATGGC...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp TCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGCTGAGGCAGAAGAATTaGTTGAGCCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLVNSAEPQTSANGFLRQLRQKN*LSLGGR
Trigger: TCTGCCTCCCAGGCTCAAGCAATTCTTCTGCCTCAG...CTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR GCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCTTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGG +
Preference number: 4 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTLSVML*RIGTMG
Trigger: CCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTTGGAGGAAGGTTTTCAGGGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KKVRTFQKRACSWRKVFRVCAPS*VPVAGS
Trigger: TGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGAC...CCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCTTGCCCAAGGTCACCTaGCAAATGAGCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERLPKVT*QMSSRT
Trigger: GGTCCTGCTGCTCATTTGCCAGGTGACCTTGGGCAA...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp ATGCTCCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTGGCTCAGCCTGGACTTaGCTTCCTCTGAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MLLCPCFWKKVTHSTPCSGSAWT*LPLKSP
Trigger: AGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCC...AGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACTCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDSGSWH*RKGRIL
Trigger: GAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGA...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCCATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAGGAGCCCCTAATCCGAGATGGTGCTGAGGCCACAGTTGGAGCCCCCATTAGAACAGCAAGAAAGGCTTaGGGCCAATACAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: QEPLIRDGAEATVGAPIRTARKA*GQYKTV
Trigger: GACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT...TCTAATGGGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATTAGGGGCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATGCTGCCCAGGGGCACTaGGTTCCTGGGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENAAQGH*VPGIGV
Trigger: CACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCAAAATGCAGCTGCTCTaGTTGAAGGGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTKMQLL*LKGVLG
Trigger: CCCCAGTACCCCCTTCAACCAGAGCAGCTGCATTTT...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCTGTGCCCGTGCTTCTaGAAGAAGGTCACACACAGT +
Preference number: 4 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLLCPCF*KKVTHS
Trigger: ACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAG...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGAGCCTCTATCCCCGCTaGCAGTGGTGTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPVERSSKITDAELAHESLYPR*QWCAPG
Trigger: CCCAGGGGCACACCACTGCCAGCGGGGATAGAGGCT...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCAAAAGTCTGGAGAGGTaGCAGAGCAGAGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTKSLER*QSREAL
Trigger: TAGGGCCTCTCTGCTCTGCCACCTCTCCAGACTTTT...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGATGAGCCACCATGTCTaGCCCTACTCGCCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKMSHHV*PYSPAL
Trigger: AAGCGCAGGCGAGTAGGGCCAGACATGGTGGCTCAT...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421415.5
CDS-3UTR TCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTGTCAAACACACAGGGTaGGCAGCCACTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: CSESLTLSQGLSHSLYCAVKHTG*AATAAA
Trigger: TGCTGCGGCAGTGGCTGCTCACCCTGTGTGTTTGAC...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TGTGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGGGAGGGGCAGCTCTGTaGCTCTGGCCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CVTMSILKMTNGGLRESTGGAAL*LWPTQQ
Trigger: CTGCTGCGTGGGCCAGAGTCACAGAGCTGCCCCTCC...CGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR TCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAGCCTGTCCATGGCAATaGTGCAGAAGGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGACPWQ*CRRPRR
Trigger: CCTTCGTGGCCTTCTGCATCATTGCCATGGACAGGC...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCTGCGTTGGCAGGGCTaGTGGGCGTATAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQALRWQG*WAYRLS
Trigger: AGAGAGCCTATACGCCCATCAGCCCTGCCAACGCAG...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGAATAGGAGTCCTCAGTaGGGCCTGCGCACAGTAAGC +
Preference number: 4 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKNRSPQ*GLRTVS
Trigger: GCTTACTGTGCGCAGGCCTCACTGAGGACTCCTATT...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp AAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTTGGAGGAAGGTTTTCAGGAATAGGAGTCCTCAGTaGGGCCTGCGCACAGTAAGC +
Preference number: 4 (lower is better)
Translates to: KKVRTFQKRACSWRKVFRNRSPQ*GLRTVS
Trigger: GCTTACTGTGCGCAGGCCTCACTGAGGACTCCTATT...CCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCCTGTGAGGCGGTCTaGAACCTCCAGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELACEAV*NLQHHP
Trigger: GGGGTGGTGCTGGAGGTTTCAGACCGCCTCACAGGC...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCCCTGCTCAGAATCTTTaGCTCTCAGTCAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFPAQNL*LSVRAF
Trigger: AAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGG...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCGCAACACTCTTAATATaGGTGACTTCAAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSATLLI*VTSKLL
Trigger: CAAAAGCTTTGAAGTCACTCATATTAAGAGTGTTGC...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTACTCCTGGCCTCAAGTaGTCTTCTCATCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLTPGLK*SSHLSL
Trigger: GAGACTGAGATGAGAAGATCACTTGAGGCCAGGAGT...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCGAAGGAACAACTGGGTaGTCTTCCAGAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEPLLPVEREGTTG*SSRTGQ
Trigger: CTGGCCTGTTCTGGAAGAGCACCCAGTTGTTCCTTC...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCAGGCTCCTGTCCTTaGTGGCTTGGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELAGSCP*WLGLPP
Trigger: GGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGC...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCTTCAAAGTATCCTTCTaGGTTGGCAGGGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAFKVSF*VGRADG
Trigger: CCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAA...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp ATGCTCCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTTCTGATTCCAGTCTGTaGTCCTTCCTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: MLLCPCFWKKVTHSTPCSSDSSL*SFLGPS
Trigger: ACTGGGACCCAGGAAGGAGCACAGACTGGAATCAGA...AGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTGCAGAATTCATTAACTaGAGTGCGCTGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFAEFIN*SALPRG
Trigger: GCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGC...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTGCTAGCCCAAGCTGGTaGAGCACGCTAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EATDQSDKSLVILIVCDAASPSW*STLEPR
Trigger: CCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGC...AGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGCTGTCCTTTCACTGCTaGTATGCAAAGAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQLSFHC*YAKNPC
Trigger: GCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAG...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTGAGCTGTCCTTTCACTaGTGCTATGCAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSELSFH*CYAKNP
Trigger: AGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTC...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GAACTGCCCCGGACTCTCTACTCCTTAAGTGGAGACCCCCTTAACACTCTTTTTCACCAGCAGCCAGGCTaGACAGAACCTACACGGAGT +
Preference number: 4 (lower is better)
Translates to: ELPRTLYSLSGDPLNTLFHQQPG*TEPTRS
Trigger: ACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTG...AAAAAGAGTGTTAAGGGGGTCTCCACTTAAGGAGTAGAGAGTCCGGGGCAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGACACAGCACCCGACCCTaGACTCTCAAGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGHSTRP*TLKFPG
Trigger: GCCTGGAAACTTGAGAGTGCAGGGTCGGGTGCTGTG...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGAGCTTGGGATGCATATaGACAAAGAGAGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLSLGCI*TKRALC
Trigger: ACACAGAGCTCTCTTTGTGCATATGCATCCCAAGCT...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCGGGACTATAGGCGCATaGCACGCCTGGCTAATTTTT +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFGTIGA*HAWLIF
Trigger: AAAAATTAGCCAGGCGTGGCATGCGCCTATAGTCCC...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCCATTGGGGAACTCATTaGCCAGATTTACCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLHWGTH*PDLPGV
Trigger: AACCCCTGGTAAATCTGGGCAATGAGTTCCCCAATG...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTCCACTGCCGCAGCACTaGGAAGGCAAGGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CSESLTLSQGLSHSLYCAPLPQH*EGKGSV
Trigger: CACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGG...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGTCTTTAATTAGGTCCTaGCCCAGGTGGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSASLIRS*PRWPKW
Trigger: CCACTTTGGCCACCTGGGCCAGGACCTAATTAAAGA...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACTCTTTAATTAGGTCCTaGCCCAGGTGGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDSLIRS*PRWPKW
Trigger: CCACTTTGGCCACCTGGGCCAGGACCTAATTAAAGA...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGACAGCAAGAAAGGCTTaGGGCCAATACAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMTARKA*GQYKTV
Trigger: GACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTGCCCAGGGGCACTaGGTTCCTGGGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LEATDQSDKSLVILIVCDAAQGH*VPGIGV
Trigger: CACCCCTATCCCAGGAACCCAGTGCCCCTGGGCAGC...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCTACTGGGGATCCATCTaGAGCTGTCCTTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTYWGSI*SCPFTA
Trigger: AGCAGTGAAAGGACAGCTCCAGATGGATCCCCAGTA...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCTACTGGGGATCCATCTaGAGCTGTCCTTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAYWGSI*SCPFTA
Trigger: AGCAGTGAAAGGACAGCTCCAGATGGATCCCCAGTA...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCACCCCAATATATGAATaGGATAAAAATGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSTPIYE*DKNAAA
Trigger: AGCAGCTGCATTTTTATCCCATTCATATATTGGGGT...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CACTTAATTAACACTTCAAAGTATCCTTCTGCGTTGGCAGGGCTGATGGGCGTAGCAGTGGTGTGCCCCTaGGCTCTCCCTAGACTAGGC +
Preference number: 4 (lower is better)
Translates to: HLINTSKYPSALAGLMGVAVVCP*ALPRLG
Trigger: GCCTAGTCTAGGGAGAGCCCAGGGGCACACCACTGC...TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAAGTGTTAATTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421415.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGAGGGTTTCACCATGTTaGCCAGCATGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQRVSPC*PAWSQT
Trigger: AGTTTGAGACCATGCTGGCCAACATGGTGAAACCCT...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CAA 72 bp CGCAGACCTCAGAGGCCTGGGGAGAGGAAAAGTGTCTaGCTCAAGTCACATACTAGGCAGGAAGAGATCATG +
Preference number: 4 (lower is better)
Translates to: RRPQRPGERKSV*LKSHTRQEEIM
Trigger: CATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCTGAGGTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAAATAGGAGTCCTCAGTaGGGCCTGCGCACAGTAAGC +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGNRSPQ*GLRTVS
Trigger: GCTTACTGTGCGCAGGCCTCACTGAGGACTCCTATT...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACACCTCATGGGGCAGATaGGAAGTAGAGGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VRAFPTHYTVLERGYETHTSWGR*EVEVLS
Trigger: GCTCAGAACCTCTACTTCTCATCTGCCCCATGAGGT...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAACCTACACGGAGTaGGGGGAAGAGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: CSESLTLSQGLSHSLYCARTYTE*GEEEAN
Trigger: GTTGGCCTCCTCTTCCCCTCACTCCGTGTAGGTTCT...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGCAGAGGAACAGCAGCTaGTGGGAACCATGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLPVERSSKITDAELAHEQRNSS*WEPCPH
Trigger: GTGGGGGCATGGTTCCCATCAGCTGCTGTTCCTCTG...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGGCCACCACTATCCTTaGAGCTGGTGTGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQGHHYP*SWCVSV
Trigger: GACAGAGACACACCAGCTTCAAGGATAGTGGTGGCC...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp CTAGTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGACAGGCCAGGCTCTATaGGACCACGGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LVQSQELSESCVTMSILKTGQAL*DHGRRP
Trigger: GGGCCTGCGCCCGTGGTCTCATAGAGCCTGGCCTGT...CTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR TCA 90 bp TGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGCTGAGTGTACCGTAGGATaGGGTGCTGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CHYVYLEDDKWRLKGEYAECTVG*GAGRAA
Trigger: TGCGGCCCGGCCAGCACCTCATCCTACGGTACACTC...AGCGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATCTTTCACTGCTGCTATaGAAAGAACCCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDLSLLL*KEPLLP
Trigger: AGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAG...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCCTTTCACTGCTGCTATaGAAAGAACCCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLLSLLL*KEPLLP
Trigger: AGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAG...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGAGAGGAAAAGTGTCTTaGTCAAGTCACATACTAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLRGKVS*SSHILG
Trigger: GCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCT...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATTCACCCAGGCTGGAGTaGAGTGGTGCCATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENSPRLE*SGAIWA
Trigger: AGCCCAGATGGCACCACTGCACTCCAGCCTGGGTGA...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCCCACTGCCGCAGCACTaGGAAGGCAAGGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIPLPQH*EGKGSV
Trigger: CACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGG...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGCTAGGCTCCTGTCCTTGCTaGCTTGGGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: VTMSILKMTNGGLRESTLGSCPC*LGLPPT
Trigger: GGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCC...TAGCGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CCA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGGGAGCTCTCCTGGTTTaGTTTATAGAAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLGALLV*FIEEIS
Trigger: GGAGATTTCTTCTATAAACCAAACCAGGAGAGCTCC...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGAGGTCCTGGCCCAGGTaGCCAAAGTGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQRSWPR*PKWVFS
Trigger: AGAGAAAACCCACTTTGGCCACCTGGGCCAGGACCT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGCCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTCCAGTAGCAGGCTCATaGCCTAGGCTTTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFPVAGS*PRLWKR
Trigger: TCTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGG...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGATTGCCCAAGGTCACCTaGCAAATGAGCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGLPKVT*QMSSRT
Trigger: GGTCCTGCTGCTCATTTGCCAGGTGACCTTGGGCAA...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGTTGCCCAAGGTCACCTaGCAAATGAGCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQLPKVT*QMSSRT
Trigger: GGTCCTGCTGCTCATTTGCCAGGTGACCTTGGGCAA...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSLALRM*SSHRTQ
Trigger: TTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCGGGGTGCCAGGTTCCTaGGGTGGGTGGACCGTGATC +
Preference number: 4 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLGVPGS*GGWTVI
Trigger: GATCACGGTCCACCCACCCCAGGAACCTGGCACCCC...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCACCCCAATATATGAATaGGATAAAAATGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGLSLDLASSEESSLTPTPIYE*DKNAAA
Trigger: AGCAGCTGCATTTTTATCCCATTCATATATTGGGGT...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGGCAGGAAGAGATCATaGTTCCTGCTCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQGRKRS*FLLRIF
Trigger: AAAGATTCTGAGCAGGAACCATGATCTCTTCCTGCC...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGTTGCTCAGCACCTTGTaGGGCACAGCACCCGACCCT +
Preference number: 4 (lower is better)
Translates to: LLPVERSSKITDAELAHELLSTL*GTAPDP
Trigger: AGGGTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAA...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTGATGAGCCACCGCACCTaGTCATCAATAACAATCCTT +
Preference number: 4 (lower is better)
Translates to: PMIRDATSSQAAQNLHGVMSHRT*SSITIL
Trigger: AAGGATTGTTATTGATGACCAGGTGCGGTGGCTCAT...CACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGGTCAAACACACAGGGTaGGCAGCCACTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSVKHTG*AATAAA
Trigger: TGCTGCGGCAGTGGCTGCTCACCCTGTGTGTTTGAC...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTACCTCATGGGGCAGATaGGAAGTAGAGGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCTSWGR*EVEVLS
Trigger: GCTCAGAACCTCTACTTCTCATCTGCCCCATGAGGT...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATGGAGGCCAGGAGGAGTaGTTAACCTCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENGGQEE*LTSWGR
Trigger: TCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCC...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATAATCCGAGATGGTGCTaGGGCCACAGTTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LEATDQSDKSLVILIVCDNPRWC*GHSWSP
Trigger: GGGGCTCCAACTGTGGCCTCAGCACCATCTCGGATT...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCCCCGCTATTTGGAGCTaGGTCAATAGGATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERPAIWS*VNRMCK
Trigger: TTTGCACATCCTATTGACTCAGCTCCAAATAGCGGG...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp CCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTGCTGGAAAGCACTTCCTaGACATTAGTTGTTTATCGC +
Preference number: 4 (lower is better)
Translates to: PMIRDATSSQAAQNLHGVLESTS*TLVVYR
Trigger: GCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAG...CACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGAGGAGCTCTCCTGGCTaGGTACAAAGAAGGTACGGA +
Preference number: 4 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQRSSPG*VQRRYG
Trigger: TCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCCT...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCGAAGGAACAACTGGGTaGTCTTCCAGAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGEGTTG*SSRTGQ
Trigger: CTGGCCTGTTCTGGAAGAGCACCCAGTTGTTCCTTC...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp GAGTCATGTGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGGGTGAGCAGCCACTaGCGCAGCACTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ESCVTMSILKMTNGGLRERVSSH*RSTGKA
Trigger: TGCCTTCCCAGTGCTGCGGCAGTGGCTGCTCACCCT...CTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACACATGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCGGCTGCCTCCCACCTTaGCAGATCTCGGTGATAGAG +
Preference number: 4 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIGCLPP*QISVIE
Trigger: CTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCC...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp GAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTTCGAGGGCCCCACCTTaGTCTCAGGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EATDQSDKSLVILIVCDASRAPP*SQDVVK
Trigger: CTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGA...AGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCCTTTCACTGCTGCTATaGAAAGAACCCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLKAEFINCSALPRGTGFLSLLL*KEPLLP
Trigger: AGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAG...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGTGCATCTGCCTGGTGTaGTGTTGTTTCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQCICLV*CCFPGV
Trigger: GACACCAGGGAAACAACAGCACACCAGGCAGATGCA...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGCAGAGATACGAGAACTaGCCCGGACTCTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQQRYEN*PGLSTP
Trigger: AGGAGTAGAGAGTCCGGGGCAGTTCTCGTATCTCTG...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGATACACATCTCTGGTTaGACTCATGTGTCACACACA +
Preference number: 4 (lower is better)
Translates to: QERLGANTRQSRAPPCSQIHISG*THVSHT
Trigger: TGTGTGTGACACATGAGTGCAACCAGAGATGTGTAT...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCTGGGAGGCAGAGGTTaGAGTGAGTCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQALGGRG*SESRSC
Trigger: GCATGATCTCGACTCACTGCAACCTCTGCCTCCCAG...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR GCA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCTTGTCTGTGATGCTCTaGAGGATAGGCACCATGGGG +
Preference number: 4 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGLSVML*RIGTMG
Trigger: CCCCATGGTGCCTATCCTGCAGAGCATCACAGACAA...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGGCCACGAAGGTCTCTaGGTTCAGCTTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELGHEGL*VQLGGA
Trigger: TGCCCCTCCAAGCTGAACCCAGAGACCTTCGTGGCC...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287899.13
ENST00000528287.5
CDS-3UTR CCA 90 bp GAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGCTGTCTGTGCTCCTTCCTaGGTCCCAGTAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EATDQSDKSLVILIVCDAVCAPS*VPVAGS
Trigger: TGAGCCTGCTACTGGGACCCAGGAAGGAGCACAGAC...AGCATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGATCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGSGSWH*RKGRIL
Trigger: GAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGA...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGACATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDLALRM*SSHRTQ
Trigger: TTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGCTCAGTGGGACAAGCTaGGAGAGGGACCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLLSGTS*ERDPGL
Trigger: GAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAG...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGGTAGCTAGCCCAAGCTaGTGCAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLVASPS*CSTLEP
Trigger: GGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTAC...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATGTAGCTAGCCCAAGCTaGTGCAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LEATDQSDKSLVILIVCDVASPS*CSTLEP
Trigger: GGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTAC...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCAAAATGCAGCTGCTCTaGTTGAAGGGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGKMQLL*LKGVLG
Trigger: CCCCAGTACCCCCTTCAACCAGAGCAGCTGCATTTT...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGGCAGGAAGAGATCATaGTTCCTGCTCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAGRKRS*FLLRIF
Trigger: AAAGATTCTGAGCAGGAACCATGATCTCTTCCTGCC...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GAACTGCCCCGGACTCTCTACTCCTTAAGTGGAGACCCCCTTAACACTCTTTTTCAGACCTCAGAGGCCTaGGGAGAGGAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ELPRTLYSLSGDPLNTLFQTSEA*GEEKCL
Trigger: AAGACACTTTTCCTCTCCCCAGGCCTCTGAGGTCTG...AAAAAGAGTGTTAAGGGGGTCTCCACTTAAGGAGTAGAGAGTCCGGGGCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGGGAGAGGAAAGGGTaGAGGAAAACTCGCAGACCT +
Preference number: 4 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCRERKG*RKTRRP
Trigger: AGGTCTGCGAGTTTTCCTCCACCCTTTCCTCTCCCT...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGTGCTGTTGTTTCCCTaGTGTCTGAACAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VRAFPTHYTVLERGYETHVLLFP*CLNRVR
Trigger: CCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCGCAGTGGTGTGCCCCTaGGCTCTCCCTAGACTAGGC +
Preference number: 4 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLAVVCP*ALPRLG
Trigger: GCCTAGTCTAGGGAGAGCCCAGGGGCACACCACTGC...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGAGGGTTTTGTCATGTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQRVLSC*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAACATGACAAAACCCT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGGTCTCAGCGTGGAGGTaGCATGGAGACTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSVSAWR*HGDWEL
Trigger: CAGCTCCCAGTCTCCATGCCACCTCCACGCTGAGAC...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGAATACAAATACAGATATaGCTAAAAACCCCATCACCC +
Preference number: 4 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRIQIQI*LKTPSP
Trigger: GGGTGATGGGGTTTTTAGCCATATCTGTATTTGTAT...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGACTATGTTGCCAGTCTaGTCTCGAACTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQTMLPV*SRTPGL
Trigger: GAGGCCAGGAGTTCGAGACCAGACTGGCAACATAGT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTGCAGGCCCTGCTCCTTaGCCAGCATTTTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQAAGPAP*PAFCRD
Trigger: GTCTCTACAAAATGCTGGCCAAGGAGCAGGGCCTGC...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
3UTR CAA 72 bp AGCTGGGAGACCCATGAGGGGAACACAGAAGTGACGTaGGTAAACATGGTGAGGGCTGAACTAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: SWETHEGNTEVT*VNMVRAELKPM
Trigger: CATTGGCTTTAGTTCAGCCCTCACCATGTTTACCAACGTCACTTCTGTGTTCCCCTCATGGGTCTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TCACTTTTAGACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCTGCGTTGGCAGGGCTaGTGGGCGTATAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLLDLQVELLPSLLGCKFLRWQG*WAYRLS
Trigger: AGAGAGCCTATACGCCCATCAGCCCTGCCAACGCAG...GAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTCTAAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGGGACTTGGCTTCCTCTaGAGAGTCCTCCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLGLGFL*RVLPDS
Trigger: GGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCC...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGTCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 4 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAESALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TCACTTTTAGACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCACAGAGTCAGGCTCCTaGCAGGCCCCCGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: SLLDLQVELLPSLLGCKFTESGS*QAPAIW
Trigger: CCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGT...GAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTCTAAAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp AAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTTGGAGGAAGGTTTTCAGGAGCAACCGACCAGAGTaGCAAAAGTCTCGTCATTCT +
Preference number: 4 (lower is better)
Translates to: KKVRTFQKRACSWRKVFRSNRPE*QKSRHS
Trigger: AGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCT...CCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGTCCCGACTCTTCCCCTaGCCAACTCCTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELSRLFP*PTPTPP
Trigger: AGGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGA...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGTCGAGGGCCCCACCTTaGTCTCAGGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSSRAPP*SQDVVK
Trigger: CTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGA...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp ATGCTCCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: MLLCPCFWKKVTHSTPCSRSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...AGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGGCAGAATTCATTAACTaGAGTGCGCTGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLPVERSSKITDAELAHEAEFIN*SALPRG
Trigger: GCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGC...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTCCCGATGGACATAACTaGATCTGCCTGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSESLTLSQGLSHSLYCAPDGHN*ICLVCC
Trigger: ACAGCACACCAGGCAGATGCAGTTATGTCCATCGGG...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAAGCCAATGCCGCTTCTaGGACCAAGAATCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTISQCRF*DQESVL
Trigger: GAGGACAGATTCTTGGTCGCAGAAGCGGCATTGGCT...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGTTCCAGAAACGGGCCTaGTCTTGGAGGAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQFQKRA*SWRKVF
Trigger: GAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAA...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGATGACAAATTACCGTAGGATGAGGTaGTGGCCGGGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SQELSESCVTMSILKMTNYRRMR*WPGRRP
Trigger: TGGCCTGCGGCCCGGCCAGCACCTCATCCTACGGTA...ATTTGTCATCTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATAAGGCAAGGGTTCTGTaGGCCGTAGCTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LEATDQSDKSLVILIVCDKARVL*AVAASR
Trigger: CCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTT...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TGTGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGCCACTGCCGCAGCACTaGGAAGGCAAGGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CVTMSILKMTNGGLRESTPLPQH*EGKGSV
Trigger: CACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGG...CGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CCA 90 bp ATGAAAATGCATTATCTAGTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTCGTAGGATGAGGTGCTaGCCGGGCCGCAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: MKMHYLVQSQELSESCVTRRMRC*PGRRPS
Trigger: GCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACG...AGTGACACATGACTCAGAGAGTTCTTGGGATTGAACTAGATAATGCATTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATAGGTCCTGGCCCAGGTaGCCAAAGTGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENRSWPR*PKWVFS
Trigger: AGAGAAAACCCACTTTGGCCACCTGGGCCAGGACCT...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGTCTTTAATTAGGTCCTaGCCCAGGTGGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQSLIRS*PRWPKW
Trigger: CCACTTTGGCCACCTGGGCCAGGACCTAATTAAAGA...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTTCAGGCTCATGGCACTaGAGGAAAGGCAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: CSESLTLSQGLSHSLYCASGSWH*RKGRIL
Trigger: GAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCTGA...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCTGGACTGTTTTACCCTaGGCAAGTCATTTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTWTVLP*ASHLVS
Trigger: TGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCA...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCTGGACTGTTTTACCCTaGGCAAGTCATTTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAWTVLP*ASHLVS
Trigger: TGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCA...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACAGACCTCAGAGGCCTaGGGAGAGGAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIQTSEA*GEEKCL
Trigger: AAGACACTTTTCCTCTCCCCAGGCCTCTGAGGTCTG...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGATGAGCCACCATGTCTaGCCCTACTCGCCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLMSHHV*PYSPAL
Trigger: AAGCGCAGGCGAGTAGGGCCAGACATGGTGGCTCAT...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGATGGTCAAACACACAGGGTaGGCAGCCACTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VQSQELSESCVTMSILKMVKHTG*AATAAA
Trigger: TGCTGCGGCAGTGGCTGCTCACCCTGTGTGTTTGAC...CATCTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR TCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCGGACTCCGTGTCTTCTaGTTCCAGTCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIGLRVF*FQSVLL
Trigger: AAGGAGCACAGACTGGAATCAGAAGACACGGAGTCC...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 4 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMSALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTGTTTCTTAGAGTCCTaGACTTTCAGCTTTGATATG +
Preference number: 4 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLCFLES*TFSFDM
Trigger: CATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACA...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAATGCTCACATGCAGATaGCACTTATGGGTACAGCGA +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGMLTCR*HLWVQR
Trigger: TCGCTGTACCCATAAGTGTCATCTGCATGTGAGCAT...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGAGCAACCGACCAGAGTaGCAAAAGTCTCGTCATTCT +
Preference number: 4 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQSNRPE*QKSRHS
Trigger: AGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCT...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TCTGAGTCATGTGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGGTCCTCCCGCTACCTaGGTGTACCGTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SESCVTMSILKMTNGGLRGPPAT*VYRRMR
Trigger: CCTCATCCTACGGTACACTCAGGTAGCGGGAGGACC...CCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACACATGACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR TCA 90 bp GTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGCTAAGCAAAGCAGGGCTGTaGAGCTTTGGTCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VTMSILKMTNGGLRESTLSKAGL*SFGPPA
Trigger: AGCGGGAGGACCAAAGCTTCACAGCCCTGCTTTGCT...TAGCGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp GAGTCATGTGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGGGCTGCCTCCCACCTTaGCAGATCTCGGTGATAGAG +
Preference number: 4 (lower is better)
Translates to: ESCVTMSILKMTNGGLREGCLPP*QISVIE
Trigger: CTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCC...CTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACACATGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp AAAATGCATTATCTAGTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGGCAGGCTCCTGTCCTTaGTGGCTTGGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KMHYLVQSQELSESCVTMAGSCP*WLGLPP
Trigger: GGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGC...CATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAACTAGATAATGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTTTCAAAGTATCCTTCTaGGTTGGCAGGGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: CSESLTLSQGLSHSLYCAFKVSF*VGRADG
Trigger: CCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAA...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATCGAGCCACAGACCAGTaGGAATGGCTTTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: LEATDQSDKSLVILIVCDRATDQ*EWLSPT
Trigger: TGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCG...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGCGAGCCACAGACCAGTaGGAATGGCTTTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLRATDQ*EWLSPT
Trigger: TGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCG...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGCTGTCCTTTCACTGCTaGTATGCAAAGAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQLSFHC*YAKNPC
Trigger: GCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAG...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGAGCTGTCCTTTCACTaGTGCTATGCAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQELSFH*CYAKNP
Trigger: AGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTC...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTTTTAACATGCTCCTGTaGCCGTGCTTCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCFNMLL*PCFWKK
Trigger: CTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAA...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACACCGCTGGCAGTGGTGTaGCCCTGGGCTCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTPLAVV*PWALPR
Trigger: TCTAGGGAGAGCCCAGGGGCACACCACTGCCAGCGG...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACACAAGCCTCTCTaGTCACTGACCAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELAHKPL*SLTKLE
Trigger: CTCCAGCTTGGTCAGTGAGCAGAGAGGCTTGTGTGC...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp TCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGATGACAAATCACGGGCGCAGGCCCTaGTCCTTGGCCAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: SQELSESCVTMSILKMTNHGRRP*SLASIL
Trigger: CAAAATGCTGGCCAAGGAGCAGGGCCTGCGCCCGTG...ATTTGTCATCTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CCA 90 bp ACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGCTAGTTGGCCACGAAGGTCTCTaGGTTCAGCTTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TMSILKMTNGGLRESTLVGHEGL*VQLGGA
Trigger: TGCCCCTCCAAGCTGAACCCAGAGACCTTCGTGGCC...AACTAGCGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATACAGACCAGTGCGAATaGCTTTCTCCGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENTDQCE*LSPTAA
Trigger: AGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGT...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCAACTCCTACTCCTCCTaGGGCTCAGCCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLNSYSS*GSAWTW
Trigger: CCAAGTCCAGGCTGAGCCCCAGGAGGAGTAGGAGTT...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp GAACTGCCCCGGACTCTCTACTCCTTAAGTGGAGACCCCCTTAACACTCTTTTTACAGCAAGAAAGGCTTaGGGCCAATACAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: ELPRTLYSLSGDPLNTLFTARKA*GQYKTV
Trigger: GACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT...AAAAAGAGTGTTAAGGGGGTCTCCACTTAAGGAGTAGAGAGTCCGGGGCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TCCTGGCTGAGTACAAAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTTGGTGGACTGTTTTACCCTaGGCAAGTCATTTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SWLSTKKVRTFQKRACSWWTVLP*ASHLVS
Trigger: TGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCA...CCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTTTGTACTCAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCTGGACTGTTTTACCCTaGGCAAGTCATTTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERWTVLP*ASHLVS
Trigger: TGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCA...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCCTGTTAGGGGTACAATaGGCCGGCCCTCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLLLGVQ*AGPHAH
Trigger: GTGAGCATGAGGGCCGGCCCATTGTACCCCTAACAG...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CAA 72 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGAT +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEP*LPVERSSKITD
Trigger: ATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
3UTR CAA 72 bp AAAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTAGATGCTCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KEGTDIPETGLL*EEGFQVDALKG
Trigger: ACCTTTGAGAGCATCTACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCCTGCTCAGAATCTTTaGCTCTCAGTCAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENPAQNL*LSVRAF
Trigger: AAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGG...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACCCGCTATTTGGAGCTaGGTCAATAGGATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIPAIWS*VNRMCK
Trigger: TTTGCACATCCTATTGACTCAGCTCCAAATAGCGGG...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp TCGTCTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGGAGCTGGGAGACCCATaGGGGGAACACAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SSILVHADGVHFNCCIYRELGDP*GEHRSD
Trigger: GTCACTTCTGTGTTCCCCTCATGGGTCTCCCAGCTC...CCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCGTCTCTGTCTCTTCCTaGGCATTTAGCATTATTTTG +
Preference number: 4 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERVSVSS*AFSIIL
Trigger: CAAAATAATGCTAAATGCTCAGGAAGAGACAGAGAC...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGACTCCTGGCCTCAAGTaGTCTTCTCATCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LLPVERSSKITDAELAHETPGLK*SSHLSL
Trigger: GAGACTGAGATGAGAAGATCACTTGAGGCCAGGAGT...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGGAAGGAACAACTGGGTaGTCTTCCAGAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLEGTTG*SSRTGQ
Trigger: CTGGCCTGTTCTGGAAGAGCACCCAGTTGTTCCTTC...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGTTTTTAATTCCTTaGTATTTCAGAGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: QQERLGANTRQSRAPPCSQFLIP*YFRECS
Trigger: GCTGCATTCTCTGAAATAGCAAGGAATTAAAAACTG...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATCATGTGTCAGGCTCATaGCACTGGAGGAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LEATDQSDKSLVILIVCDHVSGS*HWRKGR
Trigger: TCTGCCTTTCCTCCAGTGCCATGAGCCTGACACATG...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGCTGTGCCCGTGCTTCTaGAAGAAGGTCACACACAGT +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELLCPCF*KKVTHS
Trigger: ACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAG...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGAGGGTTTTGTCATGTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELRVLSC*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAACATGACAAAACCCT...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGTCCCACAACACGCAGTaGGCATCATCAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSSHNTQ*ASSEEQ
Trigger: CTGTTCCTCTGATGATGCCCACTGCGTGTTGTGGGA...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTAAAGAGAGCTCTGTGTaGCTCACAGATTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQAKESSV*LTDCGH
Trigger: GTGTCCACAATCTGTGAGCCACACAGAGCTCTCTTT...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTTGCCTTCCTGAAGCTTaGGATGCATATGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCCLPEA*DAYAQR
Trigger: TCTTTGTGCATATGCATCCCAAGCTTCAGGAAGGCA...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp GTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGCTAGCAGGCCCTGCTCCTTaGCCAGCATTTTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: VTMSILKMTNGGLRESTLAGPAP*PAFCRD
Trigger: GTCTCTACAAAATGCTGGCCAAGGAGCAGGGCCTGC...TAGCGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp TGTGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGGAAGGAACAACTGGGTaGTCTTCCAGAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CVTMSILKMTNGGLRESTEGTTG*SSRTGQ
Trigger: CTGGCCTGTTCTGGAAGAGCACCCAGTTGTTCCTTC...CGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATACTCTCCCAGCACCCTaGACTTACCTTTTCATGACA +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENTLPAP*TYLFMT
Trigger: TGTCATGAAAAGGTAAGTGCAGGGTGCTGGGAGAGT...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TCACTTTTAGACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCTCTTCTTCTTGGGCTTaGTCAGCACCTTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLLDLQVELLPSLLGCKFSSSWA*SAPCGA
Trigger: TGCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGA...GAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTCTAAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp GTTAGGGGTACAATGGGCCGGCCCTCATGCTCACATGCAGATGACACTTATGGGATTGGTGAAGATTCTTaGTTCAAAGTAGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: VRGTMGRPSCSHADDTYGIGEDS*FKVEET
Trigger: TGTTTCCTCTACTTTGAAGCAAGAATCTTCACCAAT...CCCATAAGTGTCATCTGCATGTGAGCATGAGGGCCGGCCCATTGTACCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp CTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGTCTGTGATTTCCAGAAACGGGCCTaGTCTTGGAGGAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LEATDQSDKSLVILIVCDFQKRA*SWRKVF
Trigger: GAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAA...ATCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp CTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGCAGTGGCTCAGCCTGGACTTaGCTTCCTCTGAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LYWYMRMEFTLIAVSTGSGSAWT*LPLKSP
Trigger: AGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCC...ACTGCCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQALALRM*SSHRTQ
Trigger: TTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATACAGCAAGAAAGGCTTaGGGCCAATACAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENTARKA*GQYKTV
Trigger: GACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGCCACACTCTTCTTCTTaGGCTTGCTCAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSPHSSS*ACSAPC
Trigger: ACAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGG...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp GTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGATGAGGGCTGTGAAGCTTTaGTCCTCCCGCTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: VQSQELSESCVTMSILKMRAVKL*SSRYLS
Trigger: ACTCAGGTAGCGGGAGGACCAAAGCTTCACAGCCCT...CATCTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR TCA 90 bp AAAATGCATTATCTAGTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGGCCTGTCCATGGCAATaGTGCAGAAGGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: KMHYLVQSQELSESCVTMACPWQ*CRRPRR
Trigger: CCTTCGTGGCCTTCTGCATCATTGCCATGGACAGGC...CATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAACTAGATAATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR TCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACACTGGAACTCTGCCTGTaGGGCGGTCTGAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTLELCL*GGLKPP
Trigger: TGGAGGTTTCAGACCGCCTCACAGGCAGAGTTCCAG...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp AAGAAGGTACGGACATTCCAGAAACGGGCCTGCTCTTGGAGGAAGGTTTTCAGGGCAACACTCTTAATATaGGTGACTTCAAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KKVRTFQKRACSWRKVFRATLLI*VTSKLL
Trigger: CAAAAGCTTTGAAGTCACTCATATTAAGAGTGTTGC...CCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTCTGGAATGTCCGTACCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGAGCAACCGACCAGAGTaGCAAAAGTCTCGTCATTCT +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELSNRPE*QKSRHS
Trigger: AGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCT...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LLPVERSSKITDAELAHERSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCACACACAGTACTCCATaGTCTCTGACCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLTHSTP*SLTLEL
Trigger: GAGTTCCAGGGTCAGAGAGCATGGAGTACTGTGTGT...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp AAAATGCATTATCTAGTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGAAGGCAAGGGTTCTGTaGGCCGTAGCTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: KMHYLVQSQELSESCVTMKARVL*AVAASR
Trigger: CCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTT...CATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAACTAGATAATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CCA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGACCCCAATATATGAATaGGATAAAAATGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKTPIYE*DKNAAA
Trigger: AGCAGCTGCATTTTTATCCCATTCATATATTGGGGT...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGAGTTCGAGACCAACGTaGCAAAACTCCGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLSSRPT*QNSVST
Trigger: AGTAGAGACGGAGTTTTGCCACGTTGGTCTCGAACT...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR CAA 72 bp TCACTTTTAGACTTACAGGTTGAATTGCTGCCTTCCTaGCTAGGCTGTAAGTTCCCCGATGGACATAACTGC +
Preference number: 4 (lower is better)
Translates to: SLLDLQVELLPS*LGCKFPDGHNC
Trigger: GCAGTTATGTCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTCTAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CAA 72 bp GCCCGGCCCAGTAACAATCTTTATACACATCTCTGGTaGCACTCATGTGTCACACACAACCTTTACCACAAT +
Preference number: 4 (lower is better)
Translates to: ARPSNNLYTHLW*HSCVTHNLYHN
Trigger: ATTGTGGTAAAGGTTGTGTGTGACACATGAGTGCAACCAGAGATGTGTATAAAGATTGTTACTGGGCCGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGTCAGCTTTGATATGGTaGAGAGTACATTTCTATGAC +
Preference number: 4 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQSALIW*RVHFYD
Trigger: GTCATAGAAATGTACTCTTCACCATATCAAAGCTGA...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR TCA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGATGTTTCTTAGAGTCCTaGACTTTCAGCTTTGATATG +
Preference number: 4 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGCFLES*TFSFDM
Trigger: CATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACA...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGAGGTCTCCTGACTCCTaGTCTATCTTTAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLRSPDS*SIFRSP
Trigger: TGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCT...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR GCA 90 bp TCTTGCTCAAGTCACATACTAGGCAGGAAGAGATCATGGTTCCTGCTCAGAATCAGAGGAAAAGTGTCTTaGTCAAGTCACATACTAGGC +
Preference number: 4 (lower is better)
Translates to: SCSSHILGRKRSWFLLRIRGKVS*SSHILG
Trigger: GCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCT...GATTCTGAGCAGGAACCATGATCTCTTCCTGCCTAGTATGTGACTTGAGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACATCCCATGATAAGAGATaGCACCAGCAGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTSHDKR*HQQPGC
Trigger: GCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGGA...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCCAACACATTCTAGGTTaGTTACCACTGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLQHILG*LPLGGL
Trigger: AAGGCCACCCAGTGGTAACCAACCTAGAATGTGTTG...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR TCA 90 bp TGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTGTGCTTGTTTCTTAGAGTCCTaGACTTTCAGCTTTGATATG +
Preference number: 4 (lower is better)
Translates to: CSESLTLSQGLSHSLYCACFLES*TFSFDM
Trigger: CATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACA...AGCACAGTATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TCACTTTTAGACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCTTGCTCTCAGGATGTaGTCAAGTCATAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: SLLDLQVELLPSLLGCKFLALRM*SSHRTQ
Trigger: TTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG...GAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTCTAAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATACTCACCATACTGGTTTaGTTTATAGAAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTILTILV*FIEEIS
Trigger: GGAGATTTCTTCTATAAACCAAACCAGTATGGTGAG...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421415.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATTGTTTCTTAGAGTCCTaGACTTTCAGCTTTGATATG +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENCFLES*TFSFDM
Trigger: CATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACA...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATGCAACACTCTTAATATaGGTGACTTCAAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FTAAMQRTLASCRAQFENATLLI*VTSKLL
Trigger: CAAAAGCTTTGAAGTCACTCATATTAAGAGTGTTGC...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACATACTGGGGATCCATCTaGAGCTGTCCTTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTYWGSI*SCPFTA
Trigger: AGCAGTGAAAGGACAGCTCCAGATGGATCCCCAGTA...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
3UTR CAA 72 bp AATCACATGCTGGAACTTGTGTATCCCTACATGACCTaGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: NHMLELVYPYMT*ENRLKSQKLSF
Trigger: GAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATACACAAGTTCCAGCATGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CAA 72 bp CTGGTAGCATTGTTAAACAGAACTGACACTGAACTTTaGTCCTTCCATTTGGATCATATTACCCAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LVALLNRTDTEL*SFHLDHITQEA
Trigger: GGCCTCTTGGGTAATATGATCCAAATGGAAGGACAAAAGTTCAGTGTCAGTTCTGTTTAACAATGCTACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR TCA 90 bp TCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGATGACAAATATCCCAAGAACTCTCTaGGTCATGTGTCACTATGTC +
Preference number: 4 (lower is better)
Translates to: SQELSESCVTMSILKMTNIPRTL*VMCHYV
Trigger: GACATAGTGACACATGACTCAGAGAGTTCTTGGGAT...ATTTGTCATCTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR GCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACATTTAACATGCTCCTGTaGCCGTGCTTCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTFNMLL*PCFWKK
Trigger: CTTCTTCCAGAAGCACGGGCACAGGAGCATGTTAAA...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR GCA 90 bp CTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGCAGTAGAGGAAAAGTGTCTTaGTCAAGTCACATACTAGGC +
Preference number: 4 (lower is better)
Translates to: LYWYMRMEFTLIAVSTGSRGKVS*SSHILG
Trigger: GCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCT...ACTGCCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR GCA 90 bp TTAAACAAAATGAAAGGAGTTTCTTTGCCACTGGTCTTTTCAGGGCCTTTAACATCACACAGATTGGAGTaGAGTGGCTCAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: LNKMKGVSLPLVFSGPLTSHRLE*SGSITA
Trigger: AGCTGTGATTGAGCCACTGCACTCCAATCTGTGTGA...TGTTAAAGGCCCTGAAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp TTGCCACCTGGAAAGCACTTCCTGAACATTAGTTGTTTATCGCTCAGGTATTCGACCCCAATATATGAATaGGATAAAAATGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPPGKHFLNISCLSLRYSTPIYE*DKNAAA
Trigger: AGCAGCTGCATTTTTATCCCATTCATATATTGGGGT...CGAATACCTGAGCGATAAACAACTAATGTTCAGGAAGTGCTTTCCAGGTGGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CCA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGCTCACCATACTGGTTTaGTTTATAGAAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: KEPLLPVERSSKITDAELLTILV*FIEEIS
Trigger: GGAGATTTCTTCTATAAACCAAACCAGTATGGTGAG...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CCA 90 bp TATCCCTACATGACCTTGGAAAATCGCTTGAAGTCTCAGAAGCTTAGTTTCCTCTTGGTTACCACTGGGTaGCCTTGTATAATATCTAAA +
Preference number: 4 (lower is better)
Translates to: YPYMTLENRLKSQKLSFLLVTTG*PCIISK
Trigger: TTTAGATATTATACAAGGCCACCCAGTGGTAACCAA...GAGGAAACTAAGCTTCTGAGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
3UTR CAA 72 bp TTAAACAGAACTGACACTGAACTTTTGTCCTTCCATTaGGATCATATTACCCAAGAGGCCTTGAGACAAATG +
Preference number: 4 (lower is better)
Translates to: LNRTDTELLSFH*DHITQEALRQM
Trigger: CATTTGTCTCAAGGCCTCTTGGGTAATATGATCCAAATGGAAGGACAAAAGTTCAGTGTCAGTTCTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420054.5
3UTR CAA 72 bp TCACTTAGTTATTATGTTTTTAGGACTTCGTCTATATaGGTACATGCGGATGGAGTTCACTTTAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLSYYVFRTSSI*VHADGVHFNCC
Trigger: ACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAGACGAAGTCCTAAAAACATAATAACTAAGTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS TCA 90 bp GGCTGTGAAGCTTTGGTCCTCCCGCTACCTGAGTGTACCGTAGGATaGGGTGCTGGCCGGGCCGCAGGCCAAGCTGGCTGTTCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: GCEALVLPLPECTVG*GAGRAAGQAGCSRV
Trigger: TACCCGGGAACAGCCAGCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACGGTACACTCAGGTAGCGGGAGGACCAAAGCTTCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS GCA 90 bp CCACTGCCGCAGCACTGGGAAGGCAAGGGTTCTGTGGGCCGTAGCTaGATCCAGGCTTCCTCAGTGTCGTCGTCCTCTTCCCTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PLPQHWEGKGSVGRS*IQASSVSSSSSLSA
Trigger: GGCTGAGAGGGAAGAGGACGACGACACTGAGGAAGCCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS GCA 90 bp AGGGGCAGCTCTGTGACTCTGGCCCACGCAGCAGGCTCCTGTCCTTaGTGGCTTGGGCTGCCTCCCACCTTGCCAGATCTCGGTGATAGA +
Preference number: 5 (lower is better)
Translates to: RGSSVTLAHAAGSCP*WLGLPPTLPDLGDR
Trigger: TCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCTGCGTGGGCCAGAGTCACAGAGCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287899.13
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS CCA 90 bp GGCAGCTCTGTGACTCTGGCCCACGCAGCAGGCTCCTGTCCTTGCTaGCTTGGGCTGCCTCCCACCTTGCCAGATCTCGGTGATAGAGGT +
Preference number: 5 (lower is better)
Translates to: GSSVTLAHAAGSCPC*LGLPPTLPDLGDRG
Trigger: ACCTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCTGCGTGGGCCAGAGTCACAGAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287899.13
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS-3UTR CAA 90 bp AGAGTCCTCCCTGACTCCCAGGCTGGTTGCTCACCTCCTCAGGGCCCCTACAGCGTCTCTGGGTTCAGCTaGGAGGGGCAGCTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: RVLPDSQAGCSPPQGPYSVSGFS*EGQLCD
Trigger: GTCACAGAGCTGCCCCTCCAAGCTGAACCCAGAGAC...GCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAGTCAGGGAGGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287899.13
ENST00000528287.5
CDS CCA 90 bp AGGGTGAGCAGCCACTGCCGCAGCACTGGGAAGGCAAGGGTTCTGTaGGCCGTAGCTGCATCCAGGCTTCCTCAGTGTCGTCGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RVSSHCRSTGKARVL*AVAASRLPQCRRPL
Trigger: AAGAGGACGACGACACTGAGGAAGCCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGGCTGCTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS-3UTR CAA 90 bp GGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GWVDRDRQPLSGTSWERDETGLL*EEGFQV
Trigger: TACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTC...GTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGCAGGGTCTCACTATGTaGCCAGTCTGGTCTCGAACT +
Preference number: 5 (lower is better)
Translates to: GWTVIGSRSVGQAGRGTQQGLTM*PVWSRT
Trigger: AGTTCGAGACCAGACTGGCAACATAGTGAGACCCTG...CTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS CCA 90 bp TATCCCTCTGTGACTCTGGCCCACGCAGCAGGCTCCTGTCCTTGCTaGCTTGGGCTGCCTCCCACCTTGCCAGATCTCGGTGATAGAGGT +
Preference number: 5 (lower is better)
Translates to: YPSVTLAHAAGSCPC*LGLPPTLPDLGDRG
Trigger: ACCTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCTGCGTGGGCCAGAGTCACAGAGGGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GCTGCTCTGGTTGAAGGGGGTACTGGGGATCCATCTGGAGCTGTCCTTTCACTGAGCAGGCTCCTGTCCTaGCTGGCTTGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: AALVEGGTGDPSGAVLSLSRLLS*LAWAAS
Trigger: GGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCT...CAGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TGGGGTGGGTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGCCCGTGCCTCTTCTTTaGCTAGGCTCGATTTTTGAG +
Preference number: 5 (lower is better)
Translates to: WGGWTVIGSRSVGQAGRGPVPLL*LGSIFE
Trigger: CTCAAAAATCGAGCCTAGCAAAAGAAGAGGCACGGG...CCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTAATGCAGCTGCTCTGGTaGAAGGGGGTACTGGGGATC +
Preference number: 5 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLMQLLW*KGVLGI
Trigger: GATCCCCAGTACCCCCTTCAACCAGAGCAGCTGCAT...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCCAGGGTTTTGTCATGTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LLGLSLDLASSEESSLTPQGFVM*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAACATGACAAAACCCTG...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGETGLL*EEGFQV
Trigger: TACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTC...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS GCA 90 bp TACTATCCCTCTGTGACTCTGGCCCACGCAGCAGGCTCCTGTCCTTaGTGGCTTGGGCTGCCTCCCACCTTGCCAGATCTCGGTGATAGA +
Preference number: 5 (lower is better)
Translates to: YYPSVTLAHAAGSCP*WLGLPPTLPDLGDR
Trigger: TCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCTGCGTGGGCCAGAGTCACAGAGGGATAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTTCCTGCTCAGAATCTTaGACTCTCAGTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGSCSES*TLSQGL
Trigger: AAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGA...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTGTGACTTCAAAGCTTTaGAAGCCTCTATCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGVTSKL*KPLSPL
Trigger: CAGCGGGGATAGAGGCTTCAAAAGCTTTGAAGTCAC...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGCAGGCTCCTGTCCTaGCTGGCTTGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERSRLLS*LAWAAS
Trigger: GGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCT...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GTGGACCGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTAAAGTGGGTTTTCTCTaGGTAACTCCAGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: VDRDRQPLSGTSWERDPGKVGFL*VTPGKL
Trigger: CAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTT...ACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GGCCCGTGCCCGCAGCCAGCAAGAGGAGCTCACCATACTGGTTTGGTTTATAGAGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: GPCPQPARGAHHTGLVYRGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...TCTATAAACCAAACCAGTATGGTGAGCTCCTCTTGCTGGCTGCGGGCACGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCGTGCTGAGGCCACAGTaGGAGCCCCCATTAGATCCT +
Preference number: 5 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSVLRPQ*EPPLDP
Trigger: AGGATCTAATGGGGGCTCCAACTGTGGCCTCAGCAC...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGCAGGGTTTTGTCATGTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEQGFVM*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAACATGACAAAACCCTG...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS CCA 90 bp GGCTTCCTCAGTGTCGTCGTCCTCTTCCCTCTCAGCCATCATCAGTaGGGCTTGGGCAGCCTAGAAGGAACAACTGGGTGCTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: GFLSVVVLFPLSHHQ*GLGSLEGTTGCSSR
Trigger: TCTGGAAGAGCACCCAGTTGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGATGGCTGAGAGGGAAGAGGACGACGACACTGAGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS-3UTR CAA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACAGCAGGCTCCTGTCCTaGCTGGCTTGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VRAFPTHYTVLERGYETHSRLLS*LAWAAS
Trigger: GGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCT...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp CTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCAGGCTGGTTAAGTATCCTTCTGCGTaGGCAGGGCTGATGGGCGTA +
Preference number: 5 (lower is better)
Translates to: LSLDLASSEESSLTPRLVKYPSA*AGLMGV
Trigger: TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTT...AACCAGCCTGGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGCTGAGGCCACAGTaGGAGCCCCCATTAGATCCT +
Preference number: 5 (lower is better)
Translates to: ERLGANTRQSRAPPCSQDVLRPQ*EPPLDP
Trigger: AGGATCTAATGGGGGCTCCAACTGTGGCCTCAGCAC...ATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLVEGPT*LSGCGQ
Trigger: TTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGAC...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTACACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 5 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACTCTTCCCCTGCCCAACTCCTACTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGT +
Preference number: 5 (lower is better)
Translates to: LIGGAREAPPDSSPAQLLLCKEP*LPVERS
Trigger: ACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAG...TAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTGGCCCCTCCGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CGTGATCGGCAGCCGCTCAGTGGGACAAGCTGGGAGAGGGACCCAGGTCTCCTGGAGAGGAAAAGTGTCTaGCTCAAGTCACATACTAGG +
Preference number: 5 (lower is better)
Translates to: RDRQPLSGTSWERDPGLLERKSV*LKSHTR
Trigger: CCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTC...CAGGAGACCTGGGTCCCTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGGCTTGCTCAGCACCTaGTGGGGCACAGCACCCGAC +
Preference number: 5 (lower is better)
Translates to: VRAFPTHYTVLERGYETHGLLST*WGTAPD
Trigger: GTCGGGTGCTGTGCCCCACAAGGTGCTGAGCAAGCC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS CCA 90 bp CCTTGGGCACCACCTGCACAAGGCAACGGAAGTCCCTGGCTCAACTaGAAGGGGTCTAGTAGGAAAGGTGAGGTTTTTCTCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PWAPPAQGNGSPWLN*KGSSRKGEVFLLPC
Trigger: GCAAGGCAGGAGAAAAACCTCACCTTTCCTACTAGACCCCTTCCAGTTGAGCCAGGGACTTCCGTTGCCTTGTGCAGGTGGTGCCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS-3UTR CAA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCATCATCAGTGGGGCTaGGGCAGCCTAGAAGGAACA +
Preference number: 5 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMHHQWG*GSLEGT
Trigger: TGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGATG...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGCATCATCAGTGGGGCTaGGGCAGCCTAGAAGGAACA +
Preference number: 5 (lower is better)
Translates to: QERLGANTRQSRAPPCSQHHQWG*GSLEGT
Trigger: TGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGATG...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCAGCAGGCTCCTGTCCTaGCTGGCTTGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGSRLLS*LAWAAS
Trigger: GGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCT...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTCATTGTCTGTGATGCTCTGCAGGATAGGCACCATGGGGGCCAGGCCCGTGCCAAAGTGGGTTTTCTCTaGGTAACTCCAGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LIVCDALQDRHHGGQARAKVGFL*VTPGKL
Trigger: CAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTT...GGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCATCACAGACAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TCCCATGATAAGAGATGCCACCAGCAGCCAGGCTGCACAGAACCTACACGGAGTATGCAGCTGCTCTGGTaGAAGGGGGTACTGGGGATC +
Preference number: 5 (lower is better)
Translates to: SHDKRCHQQPGCTEPTRSMQLLW*KGVLGI
Trigger: GATCCCCAGTACCCCCTTCAACCAGAGCAGCTGCAT...ACTCCGTGTAGGTTCTGTGCAGCCTGGCTGCTGGTGGCATCTCTTATCATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp GTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCGTGACTTCAAAGCTTTaGAAGCCTCTATCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VLLFPWCLNRVRLLTGPRVTSKL*KPLSPL
Trigger: CAGCGGGGATAGAGGCTTCAAAAGCTTTGAAGTCAC...GCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAGGGAAACAACAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGCATCATCAGTGGGGCTaGGGCAGCCTAGAAGGAACA +
Preference number: 5 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSAHHQWG*GSLEGT
Trigger: TGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGATG...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCAAGTATCCTTCTGCGTaGGCAGGGCTGATGGGCGTA +
Preference number: 5 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTKYPSA*AGLMGV
Trigger: TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTT...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: VRAFPTHYTVLERGYETHVEGPT*LSGCGQ
Trigger: TTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGAC...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GAACTCAGCCGAGCCACAGACCAGTGCGAATGGCTTTCTCCGACAGCAGCTGACCTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGT +
Preference number: 5 (lower is better)
Translates to: ELSRATDQCEWLSPTAADLCKEP*LPVERS
Trigger: ACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAG...GTCAGCTGCTGTCGGAGAAAGCCATTCGCACTGGTCTGTGGCTCGGCTGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTGTTGAAGGCAGAATTCATTAACTGCAGTGCGCTGCCCAGGGGCACTGGGTTCCTGCCTGGTGTGCTGTaGTTTCCCTGGTGTCTGAAC +
Preference number: 5 (lower is better)
Translates to: LLKAEFINCSALPRGTGFLPGVL*FPWCLN
Trigger: GTTCAGACACCAGGGAAACAACAGCACACCAGGCAG...GAACCCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCTGGTGACTTCAAAGCTTTaGAAGCCTCTATCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: AGPGLDSVSSDSSLCSFLVTSKL*KPLSPL
Trigger: CAGCGGGGATAGAGGCTTCAAAAGCTTTGAAGTCAC...CAGGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCCAGGGTTTCACCATGTaGGCCAGCATGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLQGFTM*ASMVSN
Trigger: GTTTGAGACCATGCTGGCCAACATGGTGAAACCCTG...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp CAGCAGGACCAGGCCTGGACTCCGTGTCTTCTGATTCCAGTCTGTGCTCCTTCCGTCTCGTCATTCTCATaGTCTGTGATGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QQDQAWTPCLLIPVCAPSVSSFS*SVMLCR
Trigger: CCTGCAGAGCATCACAGACAATGAGAATGACGAGAC...GGAAGGAGCACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp ACAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCGAAACGGGCCTGCTCTaGGAGGAAGGTTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: TARKAWGQYKTVEGPTLLETGLL*EEGFQV
Trigger: TACCTGAAAACCTTCCTCCAAGAGCAGGCCCGTTTC...GAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCAGGGTCTCACTATGTaGCCAGTCTGGTCTCGAACT +
Preference number: 5 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMQGLTM*PVWSRT
Trigger: AGTTCGAGACCAGACTGGCAACATAGTGAGACCCTG...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQVEGPT*LSGCGQ
Trigger: TTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGAC...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp AAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGCCCGTGCCTCTTCTTTaGCTAGGCTCGATTTTTGAG +
Preference number: 5 (lower is better)
Translates to: KGLGPIQDSRGPHLALRMPVPLL*LGSIFE
Trigger: CTCAAAAATCGAGCCTAGCAAAAGAAGAGGCACGGG...CATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGATGCAGCTGCTCTGGTaGAAGGGGGTACTGGGGATC +
Preference number: 5 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKMQLLW*KGVLGI
Trigger: GATCCCCAGTACCCCCTTCAACCAGAGCAGCTGCAT...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GGCCCGTGCCCGCAGCCAGCAAGAGGAGCTCACCATACTGGTTTGGTTTATAGATCCTGCTCAGAATCTTaGACTCTCAGTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: GPCPQPARGAHHTGLVYRSCSES*TLSQGL
Trigger: AAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGA...TCTATAAACCAAACCAGTATGGTGAGCTCCTCTTGCTGGCTGCGGGCACGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421415.5
CDS-3UTR CAA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGAGAGAGGAAAAGTGTCTaGCTCAAGTCACATACTAGG +
Preference number: 5 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRERKSV*LKSHTR
Trigger: CCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTC...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCCTGCCTGGTGTGCTGTaGTTTCCCTGGTGTCTGAAC +
Preference number: 5 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERLPGVL*FPWCLN
Trigger: GTTCAGACACCAGGGAAACAACAGCACACCAGGCAG...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGCAGGGTTTTGTCATGTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKQGFVM*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAACATGACAAAACCCTG...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp ATAACTGCATCTGCCTGGTGTGCTGTTGTTTCCCTGGTGTCTGAACAGAGTCAGAGCCCTTTAGGCTTCTaGGCACCAAGGGCACGGCTG +
Preference number: 5 (lower is better)
Translates to: ITASAWCAVVSLVSEQSQSPLGF*APRARL
Trigger: CAGCCGTGCCCTTGGTGCCAAGAAGCCTAAAGGGCT...CTGACTCTGTTCAGACACCAGGGAAACAACAGCACACCAGGCAGATGCAGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACCTCTTCTTCTTGGGCTaGCTCAGCACCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: VRAFPTHYTVLERGYETHLFFLG*LSTLWG
Trigger: GCCCCACAAGGTGCTGAGCAAGCCCAAGAAGAAGAG...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGTGACAGGCTTGGATTaGTGTGTGGGGAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: QERLGANTRQSRAPPCSQVTGLD*CVGKTG
Trigger: ACCAGTTTTCCCCACACACAAATCCAAGCCTGTCAC...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp CTCCTGGGGCTCAGCCTGGACTTGGCTTCCTCTGAAGAGTCCTCCCTGACTCCCTATCCCTACATGACCTaGGAAAATCGCTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LLGLSLDLASSEESSLTPYPYMT*ENRLKS
Trigger: AGACTTCAAGCGATTTTCCAAGGTCATGTAGGGATA...GGGAGTCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp GTTGGAGCCCCCATTAGATCCTCTAATCGGAGGGGCCAGGGAAGCTCCTCCCGACCCCATCTGGTAGCATaGTTAAACAGAACTGACACT +
Preference number: 5 (lower is better)
Translates to: VGAPIRSSNRRGQGSSSRPHLVA*LNRTDT
Trigger: AGTGTCAGTTCTGTTTAACAATGCTACCAGATGGGG...TCGGGAGGAGCTTCCCTGGCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR CAA 90 bp CCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTCTGACTATAAACCTAGTACTTaGGGAGGCCAAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: PVPVLLEEGHTQYSMLSDYKPST*GGQGGR
Trigger: CCGCCCACCTTGGCCTCCCAAAGTACTAGGTTTATA...GTCAGAGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR CAA 90 bp CAGCAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTGTCTCGTCATTCTCATaGTCTGTGATGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QQERLGANTRQSRAPPCSVSSFS*SVMLCR
Trigger: CCTGCAGAGCATCACAGACAATGAGAATGACGAGAC...AGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CAAGAAAGGCTTGGGGCCAATACAAGACAGTCGAGGGCCCCACCTTGCTCTCAGATGCTCTCAAAGGTCTaGAAGCAACCGACCAGAGTG +
Preference number: 5 (lower is better)
Translates to: QERLGANTRQSRAPPCSQMLSKV*KQPTRV
Trigger: CACTCTGGTCGGTTGCTTCAAGACCTTTGAGAGCAT...CTGAGAGCAAGGTGGGGCCCTCGACTGTCTTGTATTGGCCCCAAGCCTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTGTCGAGGGCCCCACCTaGCTCTCAGGATGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQAVEGPT*LSGCGQ
Trigger: TTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGAC...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 5 (lower is better)
Translates to: RGPHLALRMWSSHRTQDLHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...AAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCCACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 5 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CAAGACAGTCGAGGGCCCCACCTTGCTCTCAGGATGTGGTCAAGTCATAGAACCCCCGTGCCTCTTCTTTaGCTAGGCTCGATTTTTGAG +
Preference number: 5 (lower is better)
Translates to: QDSRGPHLALRMWSSHRTPVPLL*LGSIFE
Trigger: CTCAAAAATCGAGCCTAGCAAAAGAAGAGGCACGGG...GGTTCTATGACTTGACCACATCCTGAGAGCAAGGTGGGGCCCTCGACTGTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS TCA 90 bp GATGAGGCCCAGAAGCTTACACAGAAGGCAGACAGGAGGCTGGGATaGGAATCCATAGGACCTAAAGCCTTCAGCATAGAGGTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: DEAQKLTQKADRRLG*ESIGPKAFSIEVPN
Trigger: GTTTGGGACCTCTATGCTGAAGGCTTTAGGTCCTATGGATTCTCATCCCAGCCTCCTGTCTGCCTTCTGTGTAAGCTTCTGGGCCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS-3UTR CAA 90 bp GTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGCTAAGCAGGCTCCTGTCCTaGCTGGCTTGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VTMSILKMTNGGLRESTLSRLLS*LAWAAS
Trigger: GGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCT...TAGCGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CAA 90 bp TCCATCTGGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAAGTATCCTTCTGCGTaGGCAGGGCTGATGGGCGTA +
Preference number: 5 (lower is better)
Translates to: SIWSCPFTAAMQRTLASCKYPSA*AGLMGV
Trigger: TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTT...ACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCCAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGAAGTATCCTTCTGCGTaGGCAGGGCTGATGGGCGTA +
Preference number: 5 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQKYPSA*AGLMGV
Trigger: TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTT...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATGGGCTCAGCCTGGACTaGGCTTCCTCTGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: FTAAMQRTLASCRAQFENGLSLD*ASSEES
Trigger: GGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCC...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TGGTTCCTGCTCAGAATCTTTGACTCTCAGTCAGGGCCTTTCCCACTCACTATAATGCAGCTGCTCTGGTaGAAGGGGGTACTGGGGATC +
Preference number: 5 (lower is better)
Translates to: WFLLRIFDSQSGPFPLTIMQLLW*KGVLGI
Trigger: GATCCCCAGTACCCCCTTCAACCAGAGCAGCTGCAT...TATAGTGAGTGGGAAAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp GTCAGGGCCTTTCCCACTCACTATACTGTGCTAGAAAGAGGCTACGAAACCCACCCAACACATTCTAGGTaGGTTACCACTGGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: VRAFPTHYTVLERGYETHPTHSR*VTTGWP
Trigger: AGGCCACCCAGTGGTAACCAACCTAGAATGTGTTGG...GTGGGTTTCGTAGCCTCTTTCTAGCACAGTATAGTGAGTGGGAAAGGCCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp TCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTAGTCTCACTGGGCTTCAGCCCACACTCTTCTTCTaGGGCTTGCTCAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: SAMDCFTLGKSFSLTGLQPTLFF*GLLSTL
Trigger: CAAGGTGCTGAGCAAGCCCAAGAAGAAGAGTGTGGG...CTGAAGCCCAGTGAGACTAAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGAGGGGAGTGACAGGCTaGGATTTGTGTGTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKRGVTG*DLCVGK
Trigger: TTTCCCCACACACAAATCCAAGCCTGTCACTCCCCT...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp TCAAAGGTCTTGAAGCAACCGACCAGAGTGACAAAAGTCTCGTCATTCTCATTGGTCTCTGGGTTCAGCTaGGAGGGGCAGCTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: SKVLKQPTRVTKVSSFSLVSGFS*EGQLCD
Trigger: GTCACAGAGCTGCCCCTCCAAGCTGAACCCAGAGAC...CAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTCAAGACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528287.5
CDS-3UTR CAA 90 bp GGAGCTGTCCTTTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAAAGTGGGTTTTCTCTaGGTAACTCCAGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GAVLSLLLCKEPLLPVERKVGFL*VTPGKL
Trigger: CAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTT...GCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAAAGGACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CACTTAATTAACACTTCAAAGTATCCTTCTGCGTTGGCAGGGCTGATGGGCGTAGTGCTGAGGCCACAGTaGGAGCCCCCATTAGATCCT +
Preference number: 5 (lower is better)
Translates to: HLINTSKYPSALAGLMGVVLRPQ*EPPLDP
Trigger: AGGATCTAATGGGGGCTCCAACTGTGGCCTCAGCAC...TACGCCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAAGTGTTAATTAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GAGGCTTCTAGTGCTGGCTCTGCCATGGACTGTTTTACCCTGGGCAAGTCATTTATGCTCTCAAAGGTCTaGAAGCAACCGACCAGAGTG +
Preference number: 5 (lower is better)
Translates to: EASSAGSAMDCFTLGKSFMLSKV*KQPTRV
Trigger: CACTCTGGTCGGTTGCTTCAAGACCTTTGAGAGCAT...AAATGACTTGCCCAGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TGTGTCACTATGTCTATCTTGAAGATGACAAATGGAGGCTTAAGGGAGAGTACGGTCTCTGGGTTCAGCTaGGAGGGGCAGCTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: CVTMSILKMTNGGLRESTVSGFS*EGQLCD
Trigger: GTCACAGAGCTGCCCCTCCAAGCTGAACCCAGAGAC...CGTACTCTCCCTTAAGCCTCCATTTGTCATCTTCAAGATAGACATAGTGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CAA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCCTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGLCKEP*LPVERS
Trigger: ACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAG...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp ATGCTCCTGTGCCCGTGCTTCTGGAAGAAGGTCACACACAGTACTCCATGCTCTGAGAGGAAAAGTGTCTaGCTCAAGTCACATACTAGG +
Preference number: 5 (lower is better)
Translates to: MLLCPCFWKKVTHSTPCSERKSV*LKSHTR
Trigger: CCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTC...AGAGCATGGAGTACTGTGTGTGACCTTCTTCCAGAAGCACGGGCACAGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCTGCCTGGTGTGCTGTaGTTTCCCTGGTGTCTGAAC +
Preference number: 5 (lower is better)
Translates to: FTAAMQRTLASCRAQFENLPGVL*FPWCLN
Trigger: GTTCAGACACCAGGGAAACAACAGCACACCAGGCAG...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp CTGGTGTCTGAACAGAGTCAGGCTCCTGACAGGCCCCCGCTATTTGGAGCTGAGCCAGGGGTTCATATTTaGTCATGTTTATGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: LVSEQSQAPDRPPLFGAEPGVHI*SCLCQV
Trigger: TACTTGACATAAACATGACAAAATATGAACCCCTGG...CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCATGCTCTCAAAGGTCTaGAAGCAACCGACCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGMLSKV*KQPTRV
Trigger: CACTCTGGTCGGTTGCTTCAAGACCTTTGAGAGCAT...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TCGTCTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGGGGCTGCCTCCCACCTaGCCAGATCTCGGTGATAGA +
Preference number: 5 (lower is better)
Translates to: SSILVHADGVHFNCCIYRGLPPT*PDLGDR
Trigger: TCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCCC...CCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAGACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp TCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTCATGGCAAAGTGGGTTTTCTCTaGGTAACTCCAGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SGCGQVIEPKTFMCQAHGKVGFL*VTPGKL
Trigger: CAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTT...GCCATGAGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TTGCTCTCAGGATGTGGTCAAGTCATAGAACCCAAGACCTTCATGTGTCAGGCTTCCTGCTCAGAATCTTaGACTCTCAGTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: LLSGCGQVIEPKTFMCQASCSES*TLSQGL
Trigger: AAGGCCCTGACTGAGAGTCAAAGATTCTGAGCAGGA...AGCCTGACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
CDS-3UTR CAA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGACTGACACTGAACTTTaGTCCTTCCATTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSATDTEL*SFHLDH
Trigger: ATGATCCAAATGGAAGGACAAAAGTTCAGTGTCAGT...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR CAA 90 bp AGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGAGCCACAGACCAGTGCGGCTCACCATACTGGTTaGGTTTATAGAAGAAATCTC +
Preference number: 5 (lower is better)
Translates to: SKHLAMSLVNSAEPQTSAAHHTG*VYRRNL
Trigger: GAGATTTCTTCTATAAACCAAACCAGTATGGTGAGC...CGCACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp TCAGTGAGGCCTGCGCACAGTAAGCACCTGGCTATGTCTTTGGTGAACTCAGCCGCTCACCATACTGGTTaGGTTTATAGAAGAAATCTC +
Preference number: 5 (lower is better)
Translates to: SVRPAHSKHLAMSLVNSAAHHTG*VYRRNL
Trigger: GAGATTTCTTCTATAAACCAAACCAGTATGGTGAGC...GGCTGAGTTCACCAAAGACATAGCCAGGTGCTTACTGTGCGCAGGCCTCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp CTAGTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGCAGGGCTGTGAAGCTTaGGTCCTCCCGCTACCTGAG +
Preference number: 5 (lower is better)
Translates to: LVQSQELSESCVTMSILKQGCEA*VLPLPE
Trigger: CTCAGGTAGCGGGAGGACCAAAGCTTCACAGCCCTG...CTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS CCA 90 bp GCCACCCATCTGCAGTCTCTGCATTATCCTACACCATCTCCTGGCTaGATGAAAAATGAAGGTTACAGAAGTGATTCCTCCATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ATHLQSLHYPTPSPG*MKNEGYRSDSSMEK
Trigger: CTTCTCCATGGAGGAATCACTTCTGTAACCTTCATTTTTCATCCAGCCAGGAGATGGTGTAGGATAATGCAGAGACTGCAGATGGGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS-3UTR CAA 90 bp TCGTCTATATTGGTACATGCGGATGGAGTTCACTTTAATTGCTGTATCTACAGGGTGCTGAGGCCACAGTaGGAGCCCCCATTAGATCCT +
Preference number: 5 (lower is better)
Translates to: SSILVHADGVHFNCCIYRVLRPQ*EPPLDP
Trigger: AGGATCTAATGGGGGCTCCAACTGTGGCCTCAGCAC...CCTGTAGATACAGCAATTAAAGTGAACTCCATCCGCATGTACCAATATAGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGCACAGCAAGAAAGGCTaGGGGCCAATACAAGACAGT +
Preference number: 5 (lower is better)
Translates to: LLPVERSSKITDAELAHEHSKKG*GPIQDS
Trigger: ACTGTCTTGTATTGGCCCCAAGCCTTTCTTGCTGTG...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp AGAGGCCTGGGGAGAGGAAAAGTGTCTTGCTCAAGTCACATACTAGGCAGGAAGATTACCCAAGAGGCCTaGAGACAAATGATGTCATCT +
Preference number: 5 (lower is better)
Translates to: RGLGRGKVSCSSHILGRKITQEA*RQMMSS
Trigger: AGATGACATCATTTGTCTCAAGGCCTCTTGGGTAAT...CTTCCTGCCTAGTATGTGACTTGAGCAAGACACTTTTCCTCTCCCCAGGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR CAA 90 bp TTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGGCACATGAGGTCTCGTCATTCTCATaGTCTGTGATGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLPVERSSKITDAELAHEVSSFS*SVMLCR
Trigger: CCTGCAGAGCATCACAGACAATGAGAATGACGAGAC...CTCATGTGCCAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS-3UTR CAA 90 bp GACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCCCGATGGAAGGAGCTCTCCTGGTTaGGTTTATAGAAGAAATCTC +
Preference number: 5 (lower is better)
Translates to: DLQVELLPSLLGCKFPDGRSSPG*VYRRNL
Trigger: GAGATTTCTTCTATAAACCAAACCAGGAGAGCTCCT...TCCATCGGGGAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGCTATGCAAAGAACCCTaGCTTCCTGTAGAGCGCAGT +
Preference number: 5 (lower is better)
Translates to: KEPLLPVERSSKITDAELLCKEP*LPVERS
Trigger: ACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAG...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000528287.5
CDS TCA 90 bp TGGGCGTATAGGCTCTCTGAATTTCTAAGTCATCTACTATCCCTCTaGGAAACAGAAGTGTGCAGTCAGTCAGCCAGTCATTCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: WAYRLSEFLSHLLSL*ETEVCSQSASHSAN
Trigger: GTTTGCTGAATGACTGGCTGACTGACTGCACACTTCTGTTTCTCAGAGGGATAGTAGATGACTTAGAAATTCAGAGAGCCTATACGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462299.1
ENST00000490863.5
CDS-3UTR CAA 90 bp TATCTAGTTCAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGCATCATCAGTGGGGCTaGGGCAGCCTAGAAGGAACA +
Preference number: 5 (lower is better)
Translates to: YLVQSQELSESCVTMSILHHQWG*GSLEGT
Trigger: TGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGATG...CAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGATTGAACTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS-3UTR CAA 90 bp AAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATCACTGATGCAGAATTGAACACAGAAGTGACGTaGGTAAACATGGTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: KEPLLPVERSSKITDAELNTEVT*VNMVRA
Trigger: AGCCCTCACCATGTTTACCAACGTCACTTCTGTGTT...CAATTCTGCATCAGTGATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS-3UTR CAA 90 bp TTCACTGCTGCTATGCAAAGAACCCTTGCTTCCTGTAGAGCGCAGTTCGAAAATTATACACATCTCTGGTaGCACTCATGTGTCACACAC +
Preference number: 5 (lower is better)
Translates to: FTAAMQRTLASCRAQFENYTHLW*HSCVTH
Trigger: GTGTGTGACACATGAGTGCAACCAGAGATGTGTATA...ATTTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGCATAGCAGCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287899.13
CDS TCA 90 bp TCTTTCATAAATTGCCCATTCTCAGGTATGTCCTTATCAGCAGCGTaGAAACGGACTAATACATACCCACACAGAGCCTGGCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: SFINCPFSGMSLSAA*KRTNTYPHRAWHRV
Trigger: TACTCTGTGCCAGGCTCTGTGTGGGTATGTATTAGTCCGTTTTCACGCTGCTGATAAGGACATACCTGAGAATGGGCAATTTATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS TCA 90 bp CTTTCCCATGCTGTTCTTGTGATAGTGAATAAGTCTCATGAGATCTaGTGGTTTTACAAAGAAGAGTTTCCCCGCACAAGCTCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LSHAVLVIVNKSHEI*WFYKEEFPRTSSLL
Trigger: AAGAAGAGAGCTTGTGCGGGGAAACTCTTCTTTGTAAAACCATCAGATCTCATGAGACTTATTCACTATCACAAGAACAGCATGGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS CCA 90 bp TCACATGTGTTATCTCATTTAATCGTCCTCCTTATCCTACAAAGTTaGTACAGCCATTCCCAATTTTCAGATGAGGCCCAGAAGCTTACA +
Preference number: 5 (lower is better)
Translates to: SHVLSHLIVLLILQS*YSHSQFSDEAQKLT
Trigger: TGTAAGCTTCTGGGCCTCATCTGAAAATTGGGAATGGCTGTACCAACTTTGTAGGATAAGGAGGACGATTAAATGAGATAACACATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS-3UTR CAA 90 bp TCACTTTTAGACTTACAGGTTGAATTGCTGCCTTCCTTGCTAGGCTGTAAGTTCCTTTTGTCCTTCCATTaGGATCATATTACCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SLLDLQVELLPSLLGCKFLLSFH*DHITQE
Trigger: CTCTTGGGTAATATGATCCAAATGGAAGGACAAAAG...GAACTTACAGCCTAGCAAGGAAGGCAGCAATTCAACCTGTAAGTCTAAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420054.5
CDS-3UTR CAA 90 bp CAATCCCAAGAACTCTCTGAGTCATGTGTCACTATGTCTATCTTGAAGATGACAGTCACTATGTCTATCTaGAAGATGACAAATGGAGGC +
Preference number: 5 (lower is better)
Translates to: QSQELSESCVTMSILKMTVTMSI*KMTNGG
Trigger: GCCTCCATTTGTCATCTTCAAGATAGACATAGTGAC...TGTCATCTTCAAGATAGACATAGTGACACATGACTCAGAGAGTTCTTGGGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS CCA 72 bp GGTCAGGAGTTTGAGACCAGCCGTAGGATGAGGTGCTaGCCGGGCCGCAGGCCAAGCTGGCTGTTCCCGGGT +
Preference number: 6 (lower is better)
Translates to: GQEFETSRRMRC*PGRRPSWLFPG
Trigger: ACCCGGGAACAGCCAGCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACGGCTGGTCTCAAACTCCTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462299.1
CDS TCA 72 bp GCTTTGGTCCTCCCGCTACCTGAGTGTACCGTAGGATaGGGTGCTGGCCGGGCCGCAGGCCAAGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: ALVLPLPECTVG*GAGRAAGQAGC
Trigger: ACAGCCAGCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACGGTACACTCAGGTAGCGGGAGGACCAAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497820.1
CDS TCA 72 bp TCAGCCCCATCTGGTAGCACTGAGTGTACCGTAGGATaGGGTGCTGGCCGGGCCGCAGGCCAAGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: SAPSGSTECTVG*GAGRAAGQAGC
Trigger: ACAGCCAGCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACGGTACACTCAGTGCTACCAGATGGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493530.2
CDS CCA 72 bp AGCCACTGCCGCAGCACTGGGAAGGCAAGGGTTCTGTaGGCCGTAGCTGCATCCAGGCTTCCTCAGTGTCGT +
Preference number: 6 (lower is better)
Translates to: SHCRSTGKARVL*AVAASRLPQCR
Trigger: ACGACACTGAGGAAGCCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTTCCCAGTGCTGCGGCAGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS CAA 90 bp CACGCAGCAGGCTCCTGTCCTTGCTGGCTTGGGCTGCCTCCCACCTaGCCAGATCTCGGTGATAGAGGTCAAACACACAGGGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: HAAGSCPCWLGLPPT*PDLGDRGQTHRVSS
Trigger: GCTGCTCACCCTGTGTGTTTGACCTCTATCACCGAGATCTGGCAAGGTGGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCTGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS GCA 72 bp CAGCACTGGGAAGGCAAGGGTTCTGTGGGCCGTAGCTaGATCCAGGCTTCCTCAGTGTCGTCGTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: QHWEGKGSVGRS*IQASSVSSSSS
Trigger: GGAAGAGGACGACGACACTGAGGAAGCCTGGATGCAGCTACGGCCCACAGAACCCTTGCCTTCCCAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS CCA 72 bp TCTAAGTCATCTACTATCCCTCGTAGGATGAGGTGCTaGCCGGGCCGCAGGCCAAGCTGGCTGTTCCCGGGT +
Preference number: 6 (lower is better)
Translates to: SKSSTIPRRMRC*PGRRPSWLFPG
Trigger: ACCCGGGAACAGCCAGCTTGGCCTGCGGCCCGGCCAGCACCTCATCCTACGAGGGATAGTAGATGACTTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287899.13
ENST00000534324.6
CDS CAA 90 bp CTCAGTGTCGTCGTCCTCTTCCCTCTCAGCCATCATCAGTGGGGCTaGGGCAGCCTAGAAGGAACAACTGGGTGCTCTTCCAGAACAGGC +
Preference number: 6 (lower is better)
Translates to: LSVVVLFPLSHHQWG*GSLEGTTGCSSRTG
Trigger: GCCTGTTCTGGAAGAGCACCCAGTTGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGATGGCTGAGAGGGAAGAGGACGACGACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS CAA 72 bp GTCGTCCTCTTCCCTCTCAGCCATCATCAGTGGGGCTaGGGCAGCCTAGAAGGAACAACTGGGTGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VVLFPLSHHQWG*GSLEGTTGCSS
Trigger: GGAAGAGCACCCAGTTGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGATGGCTGAGAGGGAAGAGGACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287899.13
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS CCA 72 bp TCATCAGTGGGGCTTGGGCAGCCTAGAAGGAACAACTaGGTGCTCTTCCAGAACAGGCCAGGCTCTATGAGA +
Preference number: 6 (lower is better)
Translates to: SSVGLGQPRRNN*VLFQNRPGSMR
Trigger: TCTCATAGAGCCTGGCCTGTTCTGGAAGAGCACCCAGTTGTTCCTTCTAGGCTGCCCAAGCCCCACTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421415.5
ENST00000490863.5
ENST00000497820.1
ENST00000528287.5
ENST00000534324.6
CDS CAA 90 bp GTTTTTAAGCACCCATGGCCATCTCTGATATCATCCCTGACTTCCTaGGGCACCACCTGCACAAGGCAACGGAAGTCCCTGGCTCAACTG +
Preference number: 6 (lower is better)
Translates to: VFKHPWPSLISSLTS*GTTCTRQRKSLAQL
Trigger: CAGTTGAGCCAGGGACTTCCGTTGCCTTGTGCAGGTGGTGCCCAAGGAAGTCAGGGATGATATCAGAGATGGCCATGGGTGCTTAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS TCA 72 bp TTCCCCGCACAAGCTCTCTTCTTGTCTGCCGCCATGTaGGATATGCCTTTCACCTTCTGCCATGATTGTGAG +
Preference number: 6 (lower is better)
Translates to: FPAQALFLSAAM*DMPFTFCHDCE
Trigger: CTCACAATCATGGCAGAAGGTGAAAGGCATATCTCACATGGCGGCAGACAAGAAGAGAGCTTGTGCGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS GCA 72 bp GGGTCTAGTAGGAAAGGTGAGGTTTTTCTCCTGCCTTaGTGGAGGCTGTCTCCATGCACGCTTTGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: GSSRKGEVFLLP*WRLSPCTLCFL
Trigger: CAGAAAACAAAGCGTGCATGGAGACAGCCTCCAGCAAGGCAGGAGAAAAACCTCACCTTTCCTACTAGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS CAA 72 bp GGTGAGCGAGTGCTCCTTCTAAGGAGGGAAGCCAGTTaGCAGGTTTCAGTCCATAGTTTGTGGGGCCTAATT +
Preference number: 6 (lower is better)
Translates to: GERVLLLRREAS*QVSVHSLWGLI
Trigger: AATTAGGCCCCACAAACTATGGACTGAAACCTGCAAACTGGCTTCCCTCCTTAGAAGGAGCACTCGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS GCA 72 bp AAAGAAGAGTTTCCCCGCACAAGCTCTCTTCTTGTCTaGCGCCATGTGAGATATGCCTTTCACCTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: KEEFPRTSSLLV*RHVRYAFHLLP
Trigger: TGGCAGAAGGTGAAAGGCATATCTCACATGGCGGCAGACAAGAAGAGAGCTTGTGCGGGGAAACTCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS TCA 72 bp AATTGCCCATTCTCAGGTATGTCCTTATCAGCAGCGTaGAAACGGACTAATACATACCCACACAGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: NCPFSGMSLSAA*KRTNTYPHRAW
Trigger: CCAGGCTCTGTGTGGGTATGTATTAGTCCGTTTTCACGCTGCTGATAAGGACATACCTGAGAATGGGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS CCA 72 bp CTGCAGTCTCTGCATTATCCTACACCATCTCCTGGCTaGATGAAAAATGAAGGTTACAGAAGTGATTCCTCC +
Preference number: 6 (lower is better)
Translates to: LQSLHYPTPSPG*MKNEGYRSDSS
Trigger: GGAGGAATCACTTCTGTAACCTTCATTTTTCATCCAGCCAGGAGATGGTGTAGGATAATGCAGAGACTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS TCA 72 bp TTAACACTTCAAAGTATCCTTCTGCGTTGGCAGGGCTaGTGGGCGTATAGGCTCTCTGAATTTCTAAGTCAT +
Preference number: 6 (lower is better)
Translates to: LTLQSILLRWQG*WAYRLSEFLSH
Trigger: ATGACTTAGAAATTCAGAGAGCCTATACGCCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAAGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287899.13
ENST00000420054.5
ENST00000421415.5
ENST00000462299.1
ENST00000490863.5
ENST00000528287.5
ENST00000534324.6
CDS TCA 72 bp AGGCTCTCTGAATTTCTAAGTCATCTACTATCCCTCTaGGAAACAGAAGTGTGCAGTCAGTCAGCCAGTCAT +
Preference number: 6 (lower is better)
Translates to: RLSEFLSHLLSL*ETEVCSQSASH
Trigger: ATGACTGGCTGACTGACTGCACACTTCTGTTTCTCAGAGGGATAGTAGATGACTTAGAAATTCAGAGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462299.1
ENST00000490863.5
CDS CCA 72 bp TTATCTCATTTAATCGTCCTCCTTATCCTACAAAGTTaGTACAGCCATTCCCAATTTTCAGATGAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LSHLIVLLILQS*YSHSQFSDEAQ
Trigger: CTGGGCCTCATCTGAAAATTGGGAATGGCTGTACCAACTTTGTAGGATAAGGAGGACGATTAAATGAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490863.5
CDS CAA 72 bp AATACATACTTGTTAAACAGAACTGACACTGAACTTTaGTCCTTCCATTTGGATCATATTACCCAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: NTYLLNRTDTEL*SFHLDHITQEA
Trigger: GGCCTCTTGGGTAATATGATCCAAATGGAAGGACAAAAGTTCAGTGTCAGTTCTGTTTAACAAGTATGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462299.1
ENST00000490863.5