RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYB5R4 (Homo sapiens)

Ensembl gene IDs: ENSG00000065615

Ensembl transcript IDs: ENST00000369679.4, ENST00000369681.10, ENST00000479164.1

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGCAAGAGGTGGCTTCCCATGGTCTTGGGCAGCTCTGGCCCTGTaGCTTTCAGGGTACAGCCTCCATCCTGGCTGCTTTCATGGGCTG +
Preference number: 1 (lower is better)
Translates to: DARGGFPWSWAALAL*LSGYSLHPGCFHGL
Trigger: CAGCCCATGAAAGCAGCCAGGATGGAGGCTGTACCCTGAAAGCCACAGGGCCAGAGCTGCCCAAGACCATGGGAAGCCACCTCTTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 90 bp CAGGTCTCACATCCAGGTCACGCTGATGCAAGAGGTGGCTTCCCATaGTCTTGGGCAGCTCTGGCCCTGTGGCTTTCAGGGTACAGCCTC +
Preference number: 1 (lower is better)
Translates to: QVSHPGHADARGGFP*SWAALALWLSGYSL
Trigger: GAGGCTGTACCCTGAAAGCCACAGGGCCAGAGCTGCCCAAGACCATGGGAAGCCACCTCTTGCATCAGCGTGACCTGGATGTGAGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 90 bp CTCAACATCACATGGAAGTTGCCAAGGCTTAAGGCTTTCACCCTCTaGAGCCATGGCCTGAGCTTCATGTTGGCCCCTTTCAGCCATGGC +
Preference number: 1 (lower is better)
Translates to: LNITWKLPRLKAFTL*SHGLSFMLAPFSHG
Trigger: GCCATGGCTGAAAGGGGCCAACATGAAGCTCAGGCCATGGCTTCAGAGGGTGAAAGCCTTAAGCCTTGGCAACTTCCATGTGATGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 90 bp TACAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGGTaGAAGGCACTTCTTACATGGCGGCCGCAAGAGAAAATGAGTAAG +
Preference number: 1 (lower is better)
Translates to: YSSTWLGRPQNHGRR*KALLTWRPQEKMSK
Trigger: CTTACTCATTTTCTCTTGCGGCCGCCATGTAAGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATaGCTTTGCCAGCATAATGAAGTTGACTCTTTTGGGGTGGGTGTC +
Preference number: 1 (lower is better)
Translates to: SLCGSEGRSQSRLYP*LCQHNEVDSFGVGV
Trigger: GACACCCACCCCAAAAGAGTCAACTTCATTATGCTGGCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 90 bp TGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTaGCAGCATAATGAAGTTGACTCTTTTGGGGTGGGTGTCAAAGCT +
Preference number: 1 (lower is better)
Translates to: CGSEGRSQSRLYPCL*QHNEVDSFGVGVKA
Trigger: AGCTTTGACACCCACCCCAAAAGAGTCAACTTCATTATGCTGGCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 90 bp GCAGCAAACTTCTGCCTGGGCATCCAGGCATTTCCATACATCTTCTaGAATCTAGACAGAGGTTCCCAAACCCCATTTCTTGACTTCTGT +
Preference number: 1 (lower is better)
Translates to: AANFCLGIQAFPYIF*NLDRGSQTPFLDFC
Trigger: ACAGAAGTCAAGAAATGGGGTTTGGGAACCTCTGTCTAGATTTCAGAAGATGTATGGAAATGCCTGGATGCCCAGGCAGAAGTTTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 90 bp CCATTTTCCTGTCTTCTTCTGAGCCCTCCAAACTGTTCCAATCTCTaGCTGTTACCAAGTTCCAAAGTTGCTTCCACATTTCCCGGTATC +
Preference number: 1 (lower is better)
Translates to: PFSCLLLSPPNCSNL*LLPSSKVASTFPGI
Trigger: GATACCGGGAAATGTGGAAGCAACTTTGGAACTTGGTAACAGGCAGAGATTGGAACAGTTTGGAGGGCTCAGAAGAAGACAGGAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 90 bp TTTCCTCACGAAAAGCTCACAATGACTATCCTTGATACCCTTTGCTaGTCTGAATCTGTGAAAGTATTTGACAGTTGCACAAAGCAGCAG +
Preference number: 1 (lower is better)
Translates to: FPHEKLTMTILDTLC*SESVKVFDSCTKQQ
Trigger: CTGCTGCTTTGTGCAACTGTCAAATACTTTCACAGATTCAGATCAGCAAAGGGTATCAAGGATAGTCATTGTGAGCTTTTCGTGAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAGAGGCCTCAGAATCATaGCAGGAGGTGAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPEASES*QEVKGT
Trigger: AGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTC...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAGCCACACAGAAAGTATaGGAAGGAATGTGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPATQKV*EGMWAN
Trigger: ATTTGCCCACATTCCTTCTCATACTTTCTGTGTGGC...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAACATCACATGGAAGTTaGCAAGGCTTAAGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPTSHGS*QGLRLS
Trigger: TGAAAGCCTTAAGCCTTGGCAACTTCCATGTGATGT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCACTGCTAAACTTGCAATaGTGGGTGAAAATGACTTCA +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPLLNLQ*WVKMTS
Trigger: TGAAGTCATTTTCACCCAGCATTGCAAGTTTAGCAG...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCACTAATAGTTCTAGAATaGCTTACTAGGTGGATGGTG +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPLIVLE*LTRWMV
Trigger: CACCATCCACCTAGTAAGCCATTCTAGAACTATTAG...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTAGAGGTGGCTTCCCATaGTCTTGGGCAGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTRGGFP*SWAALA
Trigger: GGCCAGAGCTGCCCAAGACCATGGGAAGCCACCTCT...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 90 bp GGTCTGTTATCAACAGACTCAGCCCCAACCTCGTTCAGGACAAGCTaGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGC +
Preference number: 2 (lower is better)
Translates to: GLLSTDSAPTSFRTS*CGSEGRSQSRLYPC
Trigger: GCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCTTGTCCTGAACGAGGTTGGGGCTGAGTCTGTTGATAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAAGATTCCTGTCTTTGTaGATAATGATGATGGTGGAA +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPRFLSL*IMMMVE
Trigger: TTCCACCATCATCATTATTCACAAAGACAGGAATCT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGCCCACATTTCCCTTCTaGACTGCCCTAGCCGAGGTT +
Preference number: 2 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILPTFPF*TALAEV
Trigger: AACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGG...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCCTGAACCACCAGTTGTaGAGAAAGCAGCCAACCAGG +
Preference number: 2 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCLNHQL*RKQPTR
Trigger: CCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATTAGTCACTCCCATTTaGGAATTAACATGTAAGTTG +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPLVTPI*ELTCKL
Trigger: CAACTTACATGTTAATTCCCAAATGGGAGTGACTAA...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGAATGGCTTACTAGGTaGATGGTGGGGTGGTATGCA +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAEWLTR*MVGWYA
Trigger: TGCATACCACCCCACCATCCACCTAGTAAGCCATTC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCACTAAACTTGCAATGCTaGGTGAAAATGACTTCAAAA +
Preference number: 2 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPLNLQC*VKMTSK
Trigger: TTTTGAAGTCATTTTCACCCAGCATTGCAAGTTTAG...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGGCCGCAAGAGAAAATaGGTAAGATGCAAAAGCGGA +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAGRKRK*VRCKSG
Trigger: TCCGCTTTTGCATCTTACTCATTTTCTCTTGCGGCC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCTTACTAGGTGGATGGTaGGGTGGTATGCAGGAAGTA +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVALLGGW*GGMQEV
Trigger: TACTTCCTGCATACCACCCCACCATCCACCTAGTAA...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTTACCATTCTGGGGTCTaGAGGACAGTGGTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTYHSGV*RTVVLF
Trigger: GAAGAGGACCACTGTCCTCCAGACCCCAGAATGGTA...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 90 bp GATCACAGAGCAGGTTGTACCCATGCCTTTGCCAGCATAATGAAGTaGACTCTTTTGGGGTGGGTGTCAAAGCTCCTCTCATGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: DHRAGCTHAFASIMK*TLLGWVSKLLSCSV
Trigger: AACAGAACATGAGAGGAGCTTTGACACCCACCCCAAAAGAGTCAACTTCATTATGCTGGCAAAGGCATGGGTACAACCTGCTCTGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 90 bp AGTTCCACAAATCTCCAGGGCAGGGGCAAAATGCCGCCAGTCTCTTaGCTAAATCATAACAAGAGTCACCTTTGCTCCAGTTCTCAACAG +
Preference number: 2 (lower is better)
Translates to: SSTNLQGRGKMPPVS*LNHNKSHLCSSSQQ
Trigger: CTGTTGAGAACTGGAGCAAAGGTGACTCTTGTTATGATTTAGCAAAGAGACTGGCGGCATTTTGCCCCTGCCCTGGAGATTTGTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGTTCCCCTTGAGACGCTaGCCCAATATTGTTGCATTC +
Preference number: 2 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILFPLRR*PNIVAF
Trigger: GAATGCAACAATATTGGGCCAGCGTCTCAAGGGGAA...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACACTCACAGTTCTGCATaGCTGGGGAGGCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINTHSSA*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGAGT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTCAGCAAACTTCTGCCTaGGCATCCAGGCATTTCCAT +
Preference number: 2 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTQQTSA*ASRHFH
Trigger: ATGGAAATGCCTGGATGCCCAGGCAGAAGTTTGCTG...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGGTGGGAATTACAATTTaGGAGGAGATTTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILVGITI*EEIWVR
Trigger: CCTCACCCAAATCTCCTCTCAAATTGTAATTCCCAC...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCTTGTACCCATGCCTTTaGCAGCATAATGAAGTTGAC +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVALYPCL*QHNEVD
Trigger: GTCAACTTCATTATGCTGGCAAAGGCATGGGTACAA...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACGGCTTACTAGGTGGATaGTGGGGTGGTATGCAGGAA +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINGLLGG*WGGMQE
Trigger: TTCCTGCATACCACCCCACCATCCACCTAGTAAGCC...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACACAGTTCCACATGGCTaGGGAGGCCTCAGAATCATG +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINTVPHG*GGLRIM
Trigger: CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CAAAAGTTGAACTTCCAACTGGCAGGCAGCCCATTCAATAGATGTCTTGTCCTTGCCCACTATAGGTCCTaGTGTCTATCTCCATCCTCA +
Preference number: 2 (lower is better)
Translates to: QKLNFQLAGSPFNRCLVLAHYRS*CLSPSS
Trigger: TGAGGATGGAGATAGACACCAGGACCTATAGTGGGC...AAGGACAAGACATCTATTGAATGGGCTGCCTGCCAGTTGGAAGTTCAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
3UTR-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCAAGAGGGCTTCCTGCTaGACCACCAGTTGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIKRASC*TTSCGE
Trigger: TTCTCCACAACTGGTGGTTCAGCAGGAAGCCCTCTT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCCTTGATACCCTTTGCTaGTCTGAATCTGTGAAAGTA +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVALDTLC*SESVKV
Trigger: TACTTTCACAGATTCAGATCAGCAAAGGGTATCAAG...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCACGAAAAGCTCACAATaGCTATCCTTGATACCCTTT +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVATKSSQ*LSLIPF
Trigger: AAAGGGTATCAAGGATAGTCATTGTGAGCTTTTCGT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCAAAGTATTTGACAGTTaGACAAAGCAGCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAKVFDS*TKQQEE
Trigger: CTCTTCCTGCTGCTTTGTGCAACTGTCAAATACTTT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCATTGACTCACAGTTCTaGATGGCTGGGGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIIDSQF*MAGEAS
Trigger: TGAGGCCTCCCCAGCCATGCAGAACTGTGAGTCAAT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCTCCTCAGTATTTGGTTaGATTCATTGGAAGACTGAG +
Preference number: 2 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCSSVFG*IHWKTE
Trigger: CTCAGTCTTCCAATGAATGCAACCAAATACTGAGGA...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCCAGTATGAGGGAAACTaGCCCCATGATTCAAATTAT +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAQYEGN*PHDSNY
Trigger: ATAATTTGAATCATGGGGGCAGTTTCCCTCATACTG...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTAAGGACCCTAGGCCTTaGCCACAAAACCATTTTTAC +
Preference number: 2 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTKDPRP*PQNHFY
Trigger: GTAAAAATGGTTTTGTGGGCAAGGCCTAGGGTCCTT...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACAGGTGGATGGTGGGGTaGTATGCAGGAAGTAAATGG +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINRWMVG*YAGSKW
Trigger: CCATTTACTTCCTGCATACCACCCCACCATCCACCT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCCTTCCATTCCATGAATaGGGGATATGCATCAAAAGA +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVALPFHE*GICIKR
Trigger: TCTTTTGATGCATATCCCCCATTCATGGAATGGAAG...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGATGCTCAACATCACATaGAAGTTGCCAAGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILMLNIT*KLPRLK
Trigger: CTTAAGCCTTGGCAACTTCCATGTGATGTTGAGCAT...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCCCTCATTTTTCCAGCTaGTTTAGATGGACTAAAGAA +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAPHFSS*FRWTKE
Trigger: TTCTTTAGTCCATCTAAATCAGCTGGAAAAATGAGG...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGGCTGATCTGAATCTGTaGAAGTATTTGACAGTTGCA +
Preference number: 2 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILADLNL*KYLTVA
Trigger: TGCAACTGTCAAATACTTTCACAGATTCAGATCAGC...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGAACCATCAGATCTCATaGGAACTCACTTACCATCAT +
Preference number: 2 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILNHQIS*ELTYHH
Trigger: ATGATGGTAAGTGAGTTCTCATGAGATCTGATGGTT...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCTTCCTCATCTCCACCTaGGACCACCTCAGTCTAGAT +
Preference number: 2 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIFLIST*DHLSLD
Trigger: ATCTAGACTGAGGTGGTCTCAGGTGGAGATGAGGAA...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGTTCCTTGTTACTTATaGAAATATCTACAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAVPCYL*KYLQPA
Trigger: AGCTGGCTGTAGATATTTGCATAAGTAACAAGGAAC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGATAAAATCATGTCAGTaGAGATTACCCAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILIKSCQ*RLPRRH
Trigger: GTGTCTCCTGGGTAATCTCCACTGACATGATTTTAT...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCTTTCCTGTCTTCTTCTaGGCCCTCCAAACTGTTCCA +
Preference number: 2 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIFPVFF*ALQTVP
Trigger: TGGAACAGTTTGGAGGGCTCAGAAGAAGACAGGAAA...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAACAGTTCTGCATGGCTaGGGAGGCCTCAGGAAATGT +
Preference number: 2 (lower is better)
Translates to: KAEFASKCDFERNSSSLQTVLHG*GGLRKC
Trigger: ACATTTCCTGAGGCCTCCCCAGCCATGCAGAACTGT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACACAACTGCAAGGAACTaGAATCTACCTAATGAGGCT +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINTTARN*NLPNEA
Trigger: AGCCTCATTAGGTAGATTTCAGTTCCTTGCAGTTGT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACAATGCTTCCATTCCATaGATGGGGGATATGCATCAA +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINNASIP*MGDMHQ
Trigger: TTGATGCATATCCCCCATTCATGGAATGGAAGCATT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACGTGGTAGACACAATGTaGCCATCAAAGATGTCAACA +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINVVDTM*PSKMST
Trigger: TGTTGACATCTTTGATGGGCACATTGTGTCTACCAC...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCAGCAGGTTGTACCCATaGCTTTGCCAGCATAATGAA +
Preference number: 2 (lower is better)
Translates to: FFHQIPLIISLKFRVPQISRLYP*LCQHNE
Trigger: TTCATTATGCTGGCAAAGGCATGGGTACAACCTGCT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTTTGGCATTCTGTTTTaGGGTCTGCTAAACTTGCAA +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINFGILF*GLLNLQ
Trigger: TTGCAAGTTTAGCAGACCTCAAAACAGAATGCCAAA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTTGACTCTTTTGGGGTaGGTGTCAAAGCTCCTCTCA +
Preference number: 2 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNALTLLG*VSKLLS
Trigger: TGAGAGGAGCTTTGACACCCACCCCAAAAGAGTCAA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACATGGATATTGAAAACTaGAGCTCAGCTGATTCTCAA +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINMDIEN*SSADSQ
Trigger: TTGAGAATCAGCTGAGCTTCAGTTTTCAATATCCAT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTCCAATCTAACCACATaGGATCTTAAAAGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINSNLTT*DLKSSE
Trigger: TTCACTGCTTTTAAGATCTCATGTGGTTAGATTGGA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 90 bp AGAATAACAGTGATAAACTATACTCCTATCTGTGCTCCTCAGTATTaGGTTGCATTCATTGGAAGACTGAGGCTCTACTTAGGGGATTTT +
Preference number: 2 (lower is better)
Translates to: RITVINYTPICAPQY*VAFIGRLRLYLGDF
Trigger: AAAATCCCCTAAGTAGAGCCTCAGTCTTCCAATGAATGCAACCAAATACTGAGGAGCACAGATAGGAGTATAGTTTATCACTGTTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTGAAAAGAGGTTTAATTaGCTCACAGTTCTGCATGGC +
Preference number: 2 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAEKRFN*LTVLHG
Trigger: GCCATGCAGAACTGTGAGTCAATTAAACCTCTTTTC...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAAATAAGTTGCCCACATaGAAGAACCTAAGAGGGCTT +
Preference number: 2 (lower is better)
Translates to: KAEFASKCDFERNSSSLQNKLPT*KNLRGL
Trigger: AAGCCCTCTTAGGTTCTTGCATGTGGGCAACTTATT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTGGGCGTCTGTAATTTaGGGAATATTAATATTGTGT +
Preference number: 2 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINWASVI*GILILC
Trigger: ACACAATATTAATATTCCCCAAATTACAGACGCCCA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCAACACCTGCTCTACTaGTACCAATTTACTGTATTA +
Preference number: 2 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIQHLLY*YQFTVL
Trigger: TAATACAGTAAATTGGTACCAGTAGAGCAGGTGTTG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 90 bp GAACTAGACACTATACTTTCACTCTCTTTCCTAATGTCTTTGTTTTaGGCTAAGAGTAAAAATAGCTGTCAAGGTTCCCTCTCTCAAGCT +
Preference number: 2 (lower is better)
Translates to: ELDTILSLSFLMSLF*AKSKNSCQGSLSQA
Trigger: AGCTTGAGAGAGGGAACCTTGACAGCTATTTTTACTCTTAGCCAAAAACAAAGACATTAGGAAAGAGAGTGAAAGTATAGTGTCTAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 90 bp CAGCCATTTGCACATAGGAAGCTTCACAAGCTGGGCGTCTGTAATTaGGGGAATATTAATATTGTGTTCCTCTTGAGTATATTATTCATT +
Preference number: 2 (lower is better)
Translates to: QPFAHRKLHKLGVCN*GNINIVFLLSILFI
Trigger: AATGAATAATATACTCAAGAGGAACACAATATTAATATTCCCCAAATTACAGACGCCCAGCTTGTGAAGCTTCCTATGTGCAAATGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 90 bp CTGATTCTCAAATTAGTCACTCCCATTTGGGAATTAACATGTAAGTaGATAAAATCATGTCAGTGGAGATTACCCAGGAGACACTTATGG +
Preference number: 2 (lower is better)
Translates to: LILKLVTPIWELTCK*IKSCQWRLPRRHLW
Trigger: CCATAAGTGTCTCCTGGGTAATCTCCACTGACATGATTTTATCAACTTACATGTTAATTCCCAAATGGGAGTGACTAATTTGAGAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR TCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTATCTGTGAAAGTATTTaGCAGTTGCACAAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAICESI*QLHKAA
Trigger: TGCTGCTTTGTGCAACTGTCAAATACTTTCACAGAT...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAACTGGCCCAATATTGTTaGATTCAACCACATTTCTAC +
Preference number: 2 (lower is better)
Translates to: KAEFASKCDFERNSSSLQLAQYC*IQPHFY
Trigger: GTAGAAATGTGGTTGAATGCAACAATATTGGGCCAG...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTACAGTAGCTACCTATaGATTCAACAGTTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAYSSYL*IQQFPH
Trigger: GTGAGGAAACTGTTGAATGCATAGGTAGCTACTGTA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR GCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTTAGGAGATCAGGACTaGAGCATGAAGATGAATTAT +
Preference number: 2 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNALGDQD*SMKMNY
Trigger: ATAATTCATCTTCATGCTGCAGTCCTGATCTCCTAA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp ATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATaGGAGCCCCGCCCCTGCAGCAAACTTCTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: ISLLHCPSRGSP*EPRPCSKLLPG
Trigger: CCCAGGCAGAAGTTTGCTGCAGGGGCGGGGCTCTCATGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp GGTGGCTTCCCATGGTCTTGGGCAGCTCTGGCCCTGTaGCTTTCAGGGTACAGCCTCCATCCTGGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: GGFPWSWAALAL*LSGYSLHPGCF
Trigger: AAAGCAGCCAGGATGGAGGCTGTACCCTGAAAGCCACAGGGCCAGAGCTGCCCAAGACCATGGGAAGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp GGTCACGCTGATGCAAGAGGTGGCTTCCCATGGTCTTaGGCAGCTCTGGCCCTGTGGCTTTCAGGGTACAGC +
Preference number: 3 (lower is better)
Translates to: GHADARGGFPWS*AALALWLSGYS
Trigger: GCTGTACCCTGAAAGCCACAGGGCCAGAGCTGCCCAAGACCATGGGAAGCCACCTCTTGCATCAGCGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp CCATGGCCTGAGCTTCATGTTGGCCCCTTTCAGCCATaGCCGGAGTGGCTAGGAAACAGGGCACCAAGTCCT +
Preference number: 3 (lower is better)
Translates to: PWPELHVGPFQP*PEWLGNRAPSP
Trigger: AGGACTTGGTGCCCTGTTTCCTAGCCACTCCGGCCATGGCTGAAAGGGGCCAACATGAAGCTCAGGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAAGATCACAGAGCAGGTaGTACCCATGCCTTTGCCAG +
Preference number: 3 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPRSQSR*YPCLCQ
Trigger: CTGGCAAAGGCATGGGTACAACCTGCTCTGTGATCT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 72 bp GGAGTGGCTAGGAAACAGGGCACCAAGTCCTTAGACTaGACACAGCACAAGGACCCTAGGCCTTGCCCACAA +
Preference number: 3 (lower is better)
Translates to: GVARKQGTKSLD*TQHKDPRPCPQ
Trigger: TTGTGGGCAAGGCCTAGGGTCCTTGTGCTGTGTGCAGTCTAAGGACTTGGTGCCCTGTTTCCTAGCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp GTTGCCCACATGCAAGAACCTAAGAGGGCTTCCTGCTaGACCACCAGTTGTGGAGAAAGCAGCCAACCAGGG +
Preference number: 3 (lower is better)
Translates to: VAHMQEPKRASC*TTSCGESSQPG
Trigger: CCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAGCAGGAAGCCCTCTTAGGTTCTTGCATGTGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp ACCATCATGAGAACAGCATGGGGGCAATCACTCCCATaGTCCAATCACCTCCCACCAAGACCCTCCCTCGAC +
Preference number: 3 (lower is better)
Translates to: TIMRTAWGQSLP*SNHLPPRPSLD
Trigger: GTCGAGGGAGGGTCTTGGTGGGAGGTGATTGGATCATGGGAGTGATTGCCCCCATGCTGTTCTCATGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp ACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGGTaGAAGGCACTTCTTACATGGCGGCCGCAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: TWLGRPQNHGRR*KALLTWRPQEK
Trigger: TTTCTCTTGCGGCCGCCATGTAAGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp TCTCCTTTTACTCCAGGTCTCACATCCAGGTCACGCTaGTGCAAGAGGTGGCTTCCCATGGTCTTGGGCAGC +
Preference number: 3 (lower is better)
Translates to: SPFTPGLTSRSR*CKRWLPMVLGS
Trigger: GCTGCCCAAGACCATGGGAAGCCACCTCTTGCATCAGCGTGACCTGGATGTGAGACCTGGAGTAAAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp TCCATGAGAGCCCCGCCCCTGCAGCAAACTTCTGCCTaGGCATCCAGGCATTTCCATACATCTTCTGAAATC +
Preference number: 3 (lower is better)
Translates to: SMRAPPLQQTSA*ASRHFHTSSEI
Trigger: GATTTCAGAAGATGTATGGAAATGCCTGGATGCCCAGGCAGAAGTTTGCTGCAGGGGCGGGGCTCTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp GCTTTCAGGGTACAGCCTCCATCCTGGCTGCTTTCATaGGCTGGTGTTGAGTATCTGCAGCTTTTCCAGGCA +
Preference number: 3 (lower is better)
Translates to: AFRVQPPSWLLS*AGVEYLQLFQA
Trigger: TGCCTGGAAAAGCTGCAGATACTCAACACCAGCCCATGAAAGCAGCCAGGATGGAGGCTGTACCCTGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATGTGGGAATTACAATTaGAGAGGAGATTTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPCGNYN*RGDLGE
Trigger: CTCACCCAAATCTCCTCTCAAATTGTAATTCCCACA...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCACTTTGGCATTCTGTTTaGAGGTCTGCTAAACTTGCA +
Preference number: 3 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPLWHSV*RSAKLA
Trigger: TGCAAGTTTAGCAGACCTCAAAACAGAATGCCAAAG...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp CAGCCTCTAGCTAAGAGCCCAGCTCAGCTGACAATCTaGTTACAGCCTTGTGAGGCTTTAAGCAGAGGACCC +
Preference number: 3 (lower is better)
Translates to: QPLAKSPAQLTI*LQPCEALSRGP
Trigger: GGGTCCTCTGCTTAAAGCCTCACAAGGCTGTAATCAGATTGTCAGCTGAGCTGGGCTCTTAGCTAGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp ACATGGAAGTTGCCAAGGCTTAAGGCTTTCACCCTCTaGAGCCATGGCCTGAGCTTCATGTTGGCCCCTTTC +
Preference number: 3 (lower is better)
Translates to: TWKLPRLKAFTL*SHGLSFMLAPF
Trigger: GAAAGGGGCCAACATGAAGCTCAGGCCATGGCTTCAGAGGGTGAAAGCCTTAAGCCTTGGCAACTTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAAAAAGCAGTGAACTCTaGCTAGGGCAAGAAAGATAT +
Preference number: 3 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPKSSEL*LGQERY
Trigger: ATATCTTTCTTGCCCTAGCAAGAGTTCACTGCTTTT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 72 bp CATCCTGGCTGCTTTCATGGGCTGGTGTTGAGTATCTaGAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGT +
Preference number: 3 (lower is better)
Translates to: HPGCFHGLVLSI*SFSRHLVQAVS
Trigger: ACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGATACTCAACACCAGCCCATGAAAGCAGCCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTCTGCTGAACCACCAGTaGTGGAGAAAGCAGCCAACC +
Preference number: 3 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTLLNHQ*WRKQPT
Trigger: GGTTGGCTGCTTTCTCCACAACTGGTGGTTCAGCAG...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp GAGCCCAGCTCAGCTGACAATCTGATTACAGCCTTGTaGGGCTTTAAGCAGAGGACCCAGTTGAGCCATATT +
Preference number: 3 (lower is better)
Translates to: EPSSADNLITAL*GFKQRTQLSHI
Trigger: AATATGGCTCAACTGGGTCCTCTGCTTAAAGCCTCACAAGGCTGTAATCAGATTGTCAGCTGAGCTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 72 bp TTCTGTGCACCCACATGCTCAACATCACATGGAAGTTaGCAAGGCTTAAGGCTTTCACCCTCTGAAGCCATG +
Preference number: 3 (lower is better)
Translates to: FCAPTCSTSHGS*QGLRLSPSEAM
Trigger: CATGGCTTCAGAGGGTGAAAGCCTTAAGCCTTGGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp AAAAGGGGTTTAATTGGACTTACAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: KRGLIGLTVPHG*GGLRIMAGGER
Trigger: CCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCATGATGATGGTGGAATaGGCTACAGAAGACAGAGGC +
Preference number: 3 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCMMMVE*ATEDRG
Trigger: GCCTCTGTCTTCTGTAGCCAATTCCACCATCATCAT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCAATTTGAGAGGAGATTaGGGTGAGGACACAGAGCCA +
Preference number: 3 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVANLRGD*GEDTEP
Trigger: TGGCTCTGTGTCCTCACCCAAATCTCCTCTCAAATT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 72 bp GAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTaGCAGCATAATGAAGTTGACTCTTTTGGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: EGRSQSRLYPCL*QHNEVDSFGVG
Trigger: ACCCACCCCAAAAGAGTCAACTTCATTATGCTGGCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCTGTTCAACCAGCCATTaGCACATAGGAAGCTTCACA +
Preference number: 3 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVACSTSH*HIGSFT
Trigger: TGTGAAGCTTCCTATGTGCAAATGGCTGGTTGAACA...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGATGAAGTTGACTCTTTaGGGGTGGGTGTCAAAGCTC +
Preference number: 3 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILMKLTL*GWVSKL
Trigger: GAGCTTTGACACCCACCCCAAAAGAGTCAACTTCAT...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp TTACAGCCTTGTGAGGCTTTAAGCAGAGGACCCAGTTaGGCCATATTGTGCCTAGATTTCTGTGCCATGGAA +
Preference number: 3 (lower is better)
Translates to: LQPCEALSRGPS*AILCLDFCAME
Trigger: TTCCATGGCACAGAAATCTAGGCACAATATGGCTCAACTGGGTCCTCTGCTTAAAGCCTCACAAGGCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp CTGAAATCTAGACAGAGGTTCCCAAACCCCATTTCTTaGCTTCTGTGCACCCACATGCTCAACATCACATGG +
Preference number: 3 (lower is better)
Translates to: LKSRQRFPNPIS*LLCTHMLNITW
Trigger: CCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGGTTTGGGAACCTCTGTCTAGATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 72 bp GGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATaGCTTTGCCAGCATAATGAAGTTGACTCTTTTGGG +
Preference number: 3 (lower is better)
Translates to: GSEGRSQSRLYP*LCQHNEVDSFG
Trigger: CCCAAAAGAGTCAACTTCATTATGCTGGCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGCTGGAGAAGGGGACATaGATGTTGATTCCTAATAGT +
Preference number: 3 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILLEKGT*MLIPNS
Trigger: ACTATTAGGAATCAACATCAATGTCCCCTTCTCCAG...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGATGCCGCCAGTCTCTTaGCTAAATCATAACAAGAGT +
Preference number: 3 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILMPPVS*LNHNKS
Trigger: ACTCTTGTTATGATTTAGCAAAGAGACTGGCGGCAT...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp TTTGCTCCAGTTCTCAACAGGTTCCTCATCTCCACCTaGGACCACCTCAGTCTAGATTTCATTGTCCATATC +
Preference number: 3 (lower is better)
Translates to: FAPVLNRFLIST*DHLSLDFIVHI
Trigger: GATATGGACAATGAAATCTAGACTGAGGTGGTCTCAGGTGGAGATGAGGAACCTGTTGAGAACTGGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCAAGGGGACATTGATGTaGATTCCTAATAGTTCTAGA +
Preference number: 3 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCKGTLM*IPNSSR
Trigger: TCTAGAACTATTAGGAATCAACATCAATGTCCCCTT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCACCATATCAGGATGTTaGGGTTGTTTCCACATTTTA +
Preference number: 3 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVATISGC*GCFHIL
Trigger: TAAAATGTGGAAACAACCCAAACATCCTGATATGGT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp AATGCTGAAGAAGCCCACAAGGGAATTCAGAGAGACTaGAAGCATGAGATTCATCCACTAATGCTGAAGAGG +
Preference number: 3 (lower is better)
Translates to: NAEEAHKGIQRD*KHEIHPLMLKR
Trigger: CCTCTTCAGCATTAGTGGATGAATCTCATGCTTTCAGTCTCTCTGAATTCCCTTGTGGGCTTCTTCAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp GAAACCATCAGATCTCATGAGACTTATTCTCTACCATaGGAACAGTATGGGGGAAACCACCCCCATGATTCA +
Preference number: 3 (lower is better)
Translates to: ETIRSHETYSLP*EQYGGNHPHDS
Trigger: TGAATCATGGGGGTGGTTTCCCCCATACTGTTCTCATGGTAGAGAATAAGTCTCATGAGATCTGATGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 72 bp AAGTTCCAAAGTTGCTTCCACATTTCCCGGTATCTTTaGAGCAACACCTGCTCTACTGGTACCAATTTACTG +
Preference number: 3 (lower is better)
Translates to: KFQSCFHISRYL*SNTCSTGTNLL
Trigger: CAGTAAATTGGTACCAGTAGAGCAGGTGTTGCTGCAAAGATACCGGGAAATGTGGAAGCAACTTTGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp GCCTTTGCCAGCATAATGAAGTTGACTCTTTTGGGGTaGGTGTCAAAGCTCCTCTCATGTTCTGTTACATTA +
Preference number: 3 (lower is better)
Translates to: AFASIMKLTLLG*VSKLLSCSVTL
Trigger: TAATGTAACAGAACATGAGAGGAGCTTTGACACCCACCCCAAAAGAGTCAACTTCATTATGCTGGCAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTCAAGCAAATGTGACTTaGAGCGTAATTCTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTQANVT*SVILLH
Trigger: GTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTG...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp GGAAATGGGGAACTCAGTCCTACAACTGCAAGGAACTaGAATCTACCTAATGAGGCTGAAAGAACTCTTATC +
Preference number: 3 (lower is better)
Translates to: GNGELSPTTARN*NLPNEAERTLI
Trigger: GATAAGAGTTCTTTCAGCCTCATTAGGTAGATTTCAGTTCCTTGCAGTTGTAGGACTGAGTTCCCCATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp TACCCTGGATATCTGGATAGGTCCAATCTAACCACATaGGATCTTAAAAGCAGTGAACTCTTGCTAGGGCAA +
Preference number: 3 (lower is better)
Translates to: YPGYLDRSNLTT*DLKSSELLLGQ
Trigger: TTGCCCTAGCAAGAGTTCACTGCTTTTAAGATCTCATGTGGTTAGATTGGACCTATCCAGATATCCAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp CATTTCCCGGTATCTTTGCAGCAACACCTGCTCTACTaGTACCAATTTACTGTATTAGTCCATTTTCACGCT +
Preference number: 3 (lower is better)
Translates to: HFPVSLQQHLLY*YQFTVLVHFHA
Trigger: AGCGTGAAAATGGACTAATACAGTAAATTGGTACCAGTAGAGCAGGTGTTGCTGCAAAGATACCGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTGCCAGCATAATGAAGTaGACTCTTTTGGGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAASIMK*TLLGWV
Trigger: CACCCACCCCAAAAGAGTCAACTTCATTATGCTGGC...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCTGGGCGTCTGTAATTaGGGGAATATTAATATTGTG +
Preference number: 3 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINLGVCN*GNINIV
Trigger: CACAATATTAATATTCCCCAAATTACAGACGCCCAG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCAGGAGATTCTGTTGCTaGGGAAAGGAGAGAGAAAAA +
Preference number: 3 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIRRFCC*GKEREK
Trigger: TTTTTCTCTCTCCTTTCCCAAGCAACAGAATCTCCT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCTGTGCTCCTCAGTATTaGGTTGCATTCATTGGAAGA +
Preference number: 3 (lower is better)
Translates to: FFHQIPLIISLKFRVPQICAPQY*VAFIGR
Trigger: TCTTCCAATGAATGCAACCAAATACTGAGGAGCACA...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR-3UTR CAA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTGACGCTGGCCCAATATaGTTGCATTCAACCACATTT +
Preference number: 3 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNADAGPI*LHSTTF
Trigger: AAATGTGGTTGAATGCAACAATATTGGGCCAGCGTC...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp TATGCATTCAACAGTTTCCTCACGAAAAGCTCACAATaGCTATCCTTGATACCCTTTGCTGATCTGAATCTG +
Preference number: 3 (lower is better)
Translates to: YAFNSFLTKSSQ*LSLIPFADLNL
Trigger: CAGATTCAGATCAGCAAAGGGTATCAAGGATAGTCATTGTGAGCTTTTCGTGAGGAAACTGTTGAATGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp ATAGTTCTAGAATGGCTTACTAGGTGGATGGTGGGGTaGTATGCAGGAAGTAAATGGATATTGAAAACTGAA +
Preference number: 3 (lower is better)
Translates to: IVLEWLTRWMVG*YAGSKWILKTE
Trigger: TTCAGTTTTCAATATCCATTTACTTCCTGCATACCACCCCACCATCCACCTAGTAAGCCATTCTAGAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR TCA 72 bp GAAAAGCTCACAATGACTATCCTTGATACCCTTTGCTaGTCTGAATCTGTGAAAGTATTTGACAGTTGCACA +
Preference number: 3 (lower is better)
Translates to: EKLTMTILDTLC*SESVKVFDSCT
Trigger: TGTGCAACTGTCAAATACTTTCACAGATTCAGATCAGCAAAGGGTATCAAGGATAGTCATTGTGAGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR GCA 72 bp ATTCAACCCATTCCAAAGCACCAAATAATAACTTTATaGTGTGGAACTAGACACTATACTTTCACTCTCTTT +
Preference number: 3 (lower is better)
Translates to: IQPIPKHQIITL*CGTRHYTFTLF
Trigger: AAAGAGAGTGAAAGTATAGTGTCTAGTTCCACAGCATAAAGTTATTATTTGGTGCTTTGGAATGGGTTGAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CCA 72 bp TGGGAATTAACATGTAAGTTGATAAAATCATGTCAGTaGAGATTACCCAGGAGACACTTATGGATTTGTTTT +
Preference number: 3 (lower is better)
Translates to: WELTCKLIKSCQ*RLPRRHLWICF
Trigger: AAAACAAATCCATAAGTGTCTCCTGGGTAATCTCCACTGACATGATTTTATCAACTTACATGTTAATTCCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCCACGCTGCTGCGACCTaGGGGCCGGGAAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCHAAAT*GPGKTG
Trigger: CCCAGTCTTTCCCGGCCCCCAGGTCGCAGCAGCGTG...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGGAGGCGACACGCTGCTaGGACCTGGGGGCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILEATRC*DLGAGK
Trigger: TTTCCCGGCCCCCAGGTCGCAGCAGCGTGTCGCCTC...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAAAGTTGAACTTCCAACTGGCAGGCAGCCCATTCAATAGATGTCTTGTCCTTCACGCTGCTGCGACCTaGGGGCCGGGAAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: QKLNFQLAGSPFNRCLVLHAAAT*GPGKTG
Trigger: CCCAGTCTTTCCCGGCCCCCAGGTCGCAGCAGCGTG...AAGGACAAGACATCTATTGAATGGGCTGCCTGCCAGTTGGAAGTTCAACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGCAGCCATGGCCGGAGTaGCTAGGAAACAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILQPWPE*LGNRAP
Trigger: TGGTGCCCTGTTTCCTAGCCACTCCGGCCATGGCTG...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAATTCAAGATGAAATTTaGGTGGGGACACAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPIQDEI*VGTQSQ
Trigger: TTGGCTCTGTGTCCCCACCCAAATTTCATCTTGAAT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAACTCCATATAAGGGCTaGCATTATAAACGAAACCTC +
Preference number: 4 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPTPYKG*HYKRNL
Trigger: GAGGTTTCGTTTATAATGTCAGCCCTTATATGGAGT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAACGAAAAGCTCACAATaGCTATCCTTGATACCCTTT +
Preference number: 4 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPTKSSQ*LSLIPF
Trigger: AAAGGGTATCAAGGATAGTCATTGTGAGCTTTTCGT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCAGCCGAGGTTCTCCATaGGAGCCCCGCCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQISRGSP*EPRPCS
Trigger: GCTGCAGGGGCGGGGCTCTCATGGAGAACCTCGGCT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATACAGTAGCTACCTATaGATTCAACAGTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPYSSYL*IQQFPH
Trigger: GTGAGGAAACTGTTGAATGCATAGGTAGCTACTGTA...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCGCTGGAGTGCAAAGGTaGAATCTCGGCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCAGVQR*NLGSPQ
Trigger: TTGCGGTGAGCCGAGATTGCACCTTTGCACTCCAGC...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCGAATGGCTTACTAGGTaGATGGTGGGGTGGTATGCA +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGEWLTR*MVGWYA
Trigger: TGCATACCACCCCACCATCCACCTAGTAAGCCATTC...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATTTCCTTGGAATAAGTaGATTATGATTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPFPWNK*IMILQG
Trigger: CCCCTGAAGAATCATAATTCACTTATTCCAAGGAAA...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATTGAATAAAGGACAATaGCAGCTCTTCATTATGCTG +
Preference number: 4 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPLNKGQ*QLFIML
Trigger: CAGCATAATGAAGAGCTGTCATTGTCCTTTATTCAA...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATCCAATCTAACCACATaGGATCTTAAAAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPSNLTT*DLKSSE
Trigger: TTCACTGCTTTTAAGATCTCATGTGGTTAGATTGGA...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp GTCCTTGCTCACAGTGCTGTGACAGTAAAAGAAATCTTTGAAAGTAATGTCTCAGAGGCGACACGCTGCTaGGACCTGGGGGCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VLAHSAVTVKEIFESNVSEATRC*DLGAGK
Trigger: TTTCCCGGCCCCCAGGTCGCAGCAGCGTGTCGCCTC...TGAGACATTACTTTCAAAGATTTCTTTTACTGTCACAGCACTGTGAGCAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR GCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCCAAATGTCTCTGACATaGCCTGGAGACATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGQMSLT*PGDIFP
Trigger: GGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCCCTGCAGCAAACTTCTaGCTGGGCATCCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCPAANF*LGIQAF
Trigger: AAATGCCTGGATGCCCAGGCAGAAGTTTGCTGCAGG...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCGGGATTACAGGCCTATaGTACCACACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGGITGL*YHTWLI
Trigger: AATTAGCCAGGTGTGGTAGCATAGGCCTGTAATCCC...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAAAGTTGAACTTCCAACTGGCAGGCAGCCCATTCAATAGATGTCTTGTCCTTGGGGCCGGGAAAGACTaGGAAGGGACGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: QKLNFQLAGSPFNRCLVLGAGKD*EGTFSI
Trigger: GATGCTGAACGTCCCTTCCCAGTCTTTCCCGGCCCC...AAGGACAAGACATCTATTGAATGGGCTGCCTGCCAGTTGGAAGTTCAACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCGTCGATCTACCATTCTaGGGTCTGGAGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCVDLPF*GLEDSG
Trigger: ACCACTGTCCTCCAGACCCCAGAATGGTAGATCGAC...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp TCAACAGACTCAGCCCCAACCTCGTTCAGGACAAGCTaGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: STDSAPTSFRTS*CGSEGRSQSRL
Trigger: CAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCTTGTCCTGAACGAGGTTGGGGCTGAGTCTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCCTGATTACAGCCTTGTaGGGCTTTAAGCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVALITAL*GFKQRT
Trigger: GGTCCTCTGCTTAAAGCCTCACAAGGCTGTAATCAG...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTCCCACATTTCCCTTCTaGACTGCCCTAGCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTPTFPF*TALAEV
Trigger: AACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGG...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCTTCAGGCAATTATCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAFRQLS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGATAATTGCCTGAA...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCACTTACAGTTCCACATaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCTYSST*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCATGTGGAACTGTAAGT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCATAGTTCCACATGGCTaGGGAGGCCTCAGAATCATG +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCIVPHG*GGLRIM
Trigger: CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTAT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCTTTCCTGTCTTCTTCTaGGCCCTCCAAACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCFPVFF*ALQTVP
Trigger: TGGAACAGTTTGGAGGGCTCAGAAGAAGACAGGAAA...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCTGCCACAAATGTCTCTaGCATGCCCTGGAGACATTT +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCCHKCL*HALETF
Trigger: AAATGTCTCCAGGGCATGTCAGAGACATTTGTGGCA...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGCTGGTGTTGAGTATCTaGAGCTTTTCCAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILLVLSI*SFSRHL
Trigger: CAGGTGCCTGGAAAAGCTGCAGATACTCAACACCAG...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCGGGGCCGGGAAAGACTaGGAAGGGACGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIGAGKD*EGTFSI
Trigger: GATGCTGAACGTCCCTTCCCAGTCTTTCCCGGCCCC...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTACAGTTCTGCATGGCTaGGGAGGCCTCAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTTVLHG*GGLRKC
Trigger: ACATTTCCTGAGGCCTCCCCAGCCATGCAGAACTGT...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCATGCTCAACATCACATaGAAGTTGCCAAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGMLNIT*KLPRLK
Trigger: CTTAAGCCTTGGCAACTTCCATGTGATGTTGAGCAT...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp AATCTCCAGGGCAGGGGCAAAATGCCGCCAGTCTCTTaGCTAAATCATAACAAGAGTCACCTTTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NLQGRGKMPPVS*LNHNKSHLCSS
Trigger: ACTGGAGCAAAGGTGACTCTTGTTATGATTTAGCAAAGAGACTGGCGGCATTTTGCCCCTGCCCTGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCGAAGAACTGGTTCCTTaGACTCTGAGAGTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCEELVP*TLRVRN
Trigger: GTTCCTTACTCTCAGAGTTCAAGGAACCAGTTCTTC...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGTGGGAATTACAATTTaGGAGGAGATTTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAVGITI*EEIWVR
Trigger: CCTCACCCAAATCTCCTCTCAAATTGTAATTCCCAC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGCCACACAGAAAGTATaGGAAGGAATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAATQKV*EGMWAN
Trigger: ATTTGCCCACATTCCTTCTCATACTTTCTGTGTGGC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGGGGAAACTGCCCCCATaGTTCAAATTATCTCCCACT +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILGKLPP*FKLSPT
Trigger: AGTGGGAGATAATTTGAATCATGGGGGCAGTTTCCC...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTCTGAAGCCATGGCCTaGGCTTCATGTTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINSEAMA*ASCWPL
Trigger: AAGGGGCCAACATGAAGCTCAGGCCATGGCTTCAGA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCTTCAAAAGTCTCATCTaGGACAAGGCAAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAFKSLI*DKASPF
Trigger: GAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAA...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGCACTGGTCCACAAATaGAGACGAGAACTTTGGATT +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAALVHK*RRELWI
Trigger: AATCCAAAGTTCTCGTCTGCATTTGTGGACCAGTGC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCAGCAGGTTGTACCCATaGCTTTGCCAGCATAATGAA +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVASRLYP*LCQHNE
Trigger: TTCATTATGCTGGCAAAGGCATGGGTACAACCTGCT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCAAGGACCCTAGGCCTTaGCCACAAAACCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAKDPRP*PQNHFY
Trigger: GTAAAAATGGTTTTGTGGGCAAGGCCTAGGGTCCTT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCCTGTCACTTGGCTCTTaGGAAGCATGCCATTTAAGA +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVALSLGS*EACHLR
Trigger: TCTTAAATGGCATGCTTCCCAAGAGCCAAGTGACAG...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCATAAAATCATGTCAGTaGAGATTACCCAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGIKSCQ*RLPRRH
Trigger: GTGTCTCCTGGGTAATCTCCACTGACATGATTTTAT...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGTTGACTCTTTTGGGGTaGGTGTCAAAGCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILLTLLG*VSKLLS
Trigger: TGAGAGGAGCTTTGACACCCACCCCAAAAGAGTCAA...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGCATGGATTCATAATTaGCCCAACGATGAACCTGAT +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAAWIHN*PNDEPD
Trigger: ATCAGGTTCATCGTTGGGTCAATTATGAATCCATGC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCGGAATAAGTGAATTATaGTTCTTCAGGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCGISEL*FFRGWP
Trigger: TGGCCATCCCCTGAAGAATCATAATTCACTTATTCC...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCACAAAATCTCCAATCTaGAGACGATCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCTKSPI*RRSSSG
Trigger: ACCAGAGCTTGATCGTCTTCAGATTGGAGATTTTGT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCCATTTTTGGAAAAGTTaGGATCATGCAGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGHFWKS*DHAATL
Trigger: TAAGGTTGCTGCATGATCTCAACTTTTCCAAAAATG...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACAAGAGGGCTTCCTGCTaGACCACCAGTTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINKRASC*TTSCGE
Trigger: TTCTCCACAACTGGTGGTTCAGCAGGAAGCCCTCTT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCAATGCTTCCATTCCATaGATGGGGGATATGCATCAA +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVANASIP*MGDMHQ
Trigger: TTGATGCATATCCCCCATTCATGGAATGGAAGCATT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCTATCTACAGCCAGCTTaGATTTCTCCTCAGAAAATA +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGYLQPA*ISPQKI
Trigger: TATTTTCTGAGGAGAAATTCAAGCTGGCTGTAGATA...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCACTTATTCTCTACCATaGGAACAGTATGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVATYSLP*EQYGGN
Trigger: GTTTCCCCCATACTGTTCTCATGGTAGAGAATAAGT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CAAAAGTTGAACTTCCAACTGGCAGGCAGCCCATTCAATAGATGTCTTGTCCTTCCTCAGCTCTACAGGTaGCAGAGTTTGCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QKLNFQLAGSPFNRCLVLPQLYR*QSLPFR
Trigger: TCTGAAAGGCAAACTCTGGCACCTGTAGAGCTGAGG...AAGGACAAGACATCTATTGAATGGGCTGCCTGCCAGTTGGAAGTTCAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR GCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTGCACTTGAAGATGAGTaGTTGGTGGCAGCATCAAAC +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTALEDE*LVAASN
Trigger: GTTTGATGCTGCCACCAAGCACTCATCTTCAAGTGC...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGGAAGCCTGTTCCAGCTaGCAACAAAAAGAGATCTTC +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILEACSS*QQKEIF
Trigger: GAAGATCTCTTTTTGTTGGCAGCTGGAACAGGCTTC...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCGTGGTAGACACAATGTaGCCATCAAAGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCVVDTM*PSKMST
Trigger: TGTTGACATCTTTGATGGGCACATTGTGTCTACCAC...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCTTGTACCCATGCCTTTaGCAGCATAATGAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCLYPCL*QHNEVD
Trigger: GTCAACTTCATTATGCTGGCAAAGGCATGGGTACAA...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCCTTTGCAGCAACACCTaGTCTACTGGTACCAATTTA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCLCSNT*STGTNL
Trigger: TAAATTGGTACCAGTAGAGCAGGTGTTGCTGCAAAG...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCACATCACATGGAAGTTaGCAAGGCTTAAGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCTSHGS*QGLRLS
Trigger: TGAAAGCCTTAAGCCTTGGCAACTTCCATGTGATGT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCTCCTTGTTCTGTAAATaGCACTGGTCCACAAATGCA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCSLFCK*HWSTNA
Trigger: TGCATTTGTGGACCAGTGCCATTTACAGAACAAGGA...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTACCATTCTGGGGTCTaGAGGACAGTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINYHSGV*RTVVLF
Trigger: GAAGAGGACCACTGTCCTCCAGACCCCAGAATGGTA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTGCAGCTCTGGCCCTGTaGCTTTCAGGGTACAGCCTC +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAAALAL*LSGYSL
Trigger: GAGGCTGTACCCTGAAAGCCACAGGGCCAGAGCTGC...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTAGAGGTGGCTTCCCATaGTCTTGGGCAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNARGGFP*SWAALA
Trigger: GGCCAGAGCTGCCCAAGACCATGGGAAGCCACCTCT...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCAAGTCCAAAATCCAGTaGGGCAGTCAAATTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGKSKIQ*GSQILK
Trigger: CTTTAAAATTTGACTGCCCCACTGGATTTTGGACTT...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp ACCCATGCCTTTGCCAGCATAATGAAGTTGACTCTTTaGGGGTGGGTGTCAAAGCTCCTCTCATGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: THAFASIMKLTL*GWVSKLLSCSV
Trigger: AACAGAACATGAGAGGAGCTTTGACACCCACCCCAAAAGAGTCAACTTCATTATGCTGGCAAAGGCATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTaGTACCCATGCCTTTGCCAGCATAATGAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSR*YPCLCQHNEVD
Trigger: GTCAACTTCATTATGCTGGCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCCTTGATACCCTTTGCTaGTCTGAATCTGTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCLDTLC*SESVKV
Trigger: TACTTTCACAGATTCAGATCAGCAAAGGGTATCAAG...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAACATCCAGGTCACGCTaGTGCAAGAGGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQTSRSR*CKRWLP
Trigger: GGGAAGCCACCTCTTGCATCAGCGTGACCTGGATGT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CAAAAGTTGAACTTCCAACTGGCAGGCAGCCCATTCAATAGATGTCTTGTCCTTACAGGTGCCAGAGTTTaGCTTTCAGAACAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QKLNFQLAGSPFNRCLVLTGARV*LSEQQV
Trigger: AACCTGCTGTTCTGAAAGGCAAACTCTGGCACCTGT...AAGGACAAGACATCTATTGAATGGGCTGCCTGCCAGTTGGAAGTTCAACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCGGCTCTTGGGAAGCATaGCATTTAAGACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCGSWEA*HLRLSF
Trigger: AAAAGAAAGTCTTAAATGGCATGCTTCCCAAGAGCC...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCCTGGCCCAATATTGTTaGATTCAACCACATTTCTAC +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCLAQYC*IQPHFY
Trigger: GTAGAAATGTGGTTGAATGCAACAATATTGGGCCAG...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCAAAGTATTTGACAGTTaGACAAAGCAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCKVFDS*TKQQEE
Trigger: CTCTTCCTGCTGCTTTGTGCAACTGTCAAATACTTT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCTTTCAAAACCAATCATaGATTCCCAACAGTACCCCA +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAFQNQS*IPNSTP
Trigger: TGGGGTACTGTTGGGAATGCATGATTGGTTTTGAAA...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACAAGACGATCAAGCTCTaGTGTGAAGAGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINKTIKL*CEESSG
Trigger: CCCACTGGACTCTTCACACCAGAGCTTGATCGTCTT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCTTAGTCACTCCCATTTaGGAATTAACATGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGLVTPI*ELTCKL
Trigger: CAACTTACATGTTAATTCCCAAATGGGAGTGACTAA...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCCTAATAGTTCTAGAATaGCTTACTAGGTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVALIVLE*LTRWMV
Trigger: CACCATCCACCTAGTAAGCCATTCTAGAACTATTAG...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp ACTGTTCCAATCTCTGCCTGTTACCAAGTTCCAAAGTaGCTTCCACATTTCCCGGTATCTTTGCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: TVPISACYQVPK*LPHFPVSLQQH
Trigger: GTGTTGCTGCAAAGATACCGGGAAATGTGGAAGCAACTTTGGAACTTGGTAACAGGCAGAGATTGGAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp GTATTGGGTAAATACAGCCATTCCAAATGGGAGAAATaGGCCAAAACAAAGGGGTTACAGGGCCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: VLGKYSHSKWEK*AKTKGLQGPWK
Trigger: CTTCCATGGGCCCTGTAACCCCTTTGTTTTGGCCAATTTCTCCCATTTGGAATGGCTGTATTTACCCAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTACAACTGCAAGGAACTaGAATCTACCTAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTTTARN*NLPNEA
Trigger: AGCCTCATTAGGTAGATTTCAGTTCCTTGCAGTTGT...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTGAGTACAATTCAAGATaGGATTTGGGTGGTGACACA +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTEYNSR*DLGGDT
Trigger: TGTGTCACCACCCAAATCTCATCTTGAATTGTACTC...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCCAAACCCCATTTCTTaGCTTCTGTGCACCCACATG +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIPNPIS*LLCTHM
Trigger: CATGTGGGTGCACAGAAGTCAAGAAATGGGGTTTGG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTAGTCCCTTCCACTTATaGGCCTGTAAAATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTSPFHL*ACKIKS
Trigger: GCTTTTGATTTTACAGGCTCATAAGTGGAAGGGACT...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTAATAAGTTGCCCACATaGAAGAACCTAAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTNKLPT*KNLRGL
Trigger: AAGCCCTCTTAGGTTCTTGCATGTGGGCAACTTATT...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGCTGCTAAACTTGCAATaGTGGGTGAAAATGACTTCA +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILLLNLQ*WVKMTS
Trigger: TGAAGTCATTTTCACCCAGCATTGCAAGTTTAGCAG...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTTGCCCAGGCTGGAGTaGAAAGGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNALPRLE*KGAISA
Trigger: AGCCGAGATTGCACCTTTGCACTCCAGCCTGGGCAA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAACTCACAGTTCTGCATaGCTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQTHSSA*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGAGT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCAGCTAGCAAGGAAATaGGGAACTCAGTCCTACAAC +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINQLARK*GTQSYN
Trigger: GTTGTAGGACTGAGTTCCCCATTTCCTTGCTAGCTG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGCTTCCATTCCATGAATaGGGGATATGCATCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILLPFHE*GICIKR
Trigger: TCTTTTGATGCATATCCCCCATTCATGGAATGGAAG...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCCAACACCTGCTCTACTaGTACCAATTTACTGTATTA +
Preference number: 4 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCQHLLY*YQFTVL
Trigger: TAATACAGTAAATTGGTACCAGTAGAGCAGGTGTTG...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCAGCAAACTTCTGCCTaGGCATCCAGGCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIQQTSA*ASRHFH
Trigger: ATGGAAATGCCTGGATGCCCAGGCAGAAGTTTGCTG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAGTACAGCCTCCATCCTaGCTGCTTTCATGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQVQPPS*LLSWAG
Trigger: ACCAGCCCATGAAAGCAGCCAGGATGGAGGCTGTAC...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp CAAGTTCCAAAGTTGCTTCCACATTTCCCGGTATCTTaGCAGCAACACCTGCTCTACTGGTACCAATTTACT +
Preference number: 4 (lower is better)
Translates to: QVPKLLPHFPVS*QQHLLYWYQFT
Trigger: AGTAAATTGGTACCAGTAGAGCAGGTGTTGCTGCAAAGATACCGGGAAATGTGGAAGCAACTTTGGAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGAGATTCCTGTCTTTGTaGATAATGATGATGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILRFLSL*IMMMVE
Trigger: TTCCACCATCATCATTATTCACAAAGACAGGAATCT...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTTTTGGCATTCTGTTTTaGGGTCTGCTAAACTTGCAA +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTFGILF*GLLNLQ
Trigger: TTGCAAGTTTAGCAGACCTCAAAACAGAATGCCAAA...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTTTTCCATACATCTTCTaGAATCTAGACAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTFPYIF*NLDRGS
Trigger: GGAACCTCTGTCTAGATTTCAGAAGATGTATGGAAA...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGTTAGGAGATCAGGACTaGAGCATGAAGATGAATTAT +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILLGDQD*SMKMNY
Trigger: ATAATTCATCTTCATGCTGCAGTCCTGATCTCCTAA...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGGTTCCTTGTTACTTATaGAAATATCTACAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILVPCYL*KYLQPA
Trigger: AGCTGGCTGTAGATATTTGCATAAGTAACAAGGAAC...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp GTCCTTGCTCACAGTGCTGTGACAGTAAAAGAAATCTTTGAAAGTAATGTCTCAGCCCACTATAGGTCCTaGTGTCTATCTCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: VLAHSAVTVKEIFESNVSAHYRS*CLSPSS
Trigger: TGAGGATGGAGATAGACACCAGGACCTATAGTGGGC...TGAGACATTACTTTCAAAGATTTCTTTTACTGTCACAGCACTGTGAGCAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCAGTGTATCTGTCACTTaGCTCTTGGGAAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQISVSVT*LLGSMP
Trigger: TGGCATGCTTCCCAAGAGCCAAGTGACAGATACACT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTCTGAACCACCAGTTGTaGAGAAAGCAGCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNALNHQL*RKQPTR
Trigger: CCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCGTCTCTGACATGCCCTaGAGACATTTTCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIVSDMP*RHFPHC
Trigger: ACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGAC...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAGGGTTACAGGGCCCATaGAAGTCCAAAATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQGLQGP*KSKIQW
Trigger: CCACTGGATTTTGGACTTCCATGGGCCCTGTAACCC...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACATATCATCCCACCCCTaGCTCCTCCAAATCTTATGT +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINISSHP*LLQILC
Trigger: ACATAAGATTTGGAGGAGCCAGGGGTGGGATGATAT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCACTTATAGTTCCACATaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQITYSST*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCATGTGGAACTATAAGT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp AGCTGGTATGGAAGAGTCAGACTGGAGAAGGGGACATaGATGTTGATTCCTAATAGTTCTAGAATGGCTTAC +
Preference number: 4 (lower is better)
Translates to: SWYGRVRLEKGT*MLIPNSSRMAY
Trigger: GTAAGCCATTCTAGAACTATTAGGAATCAACATCAATGTCCCCTTCTCCAGTCTGACTCTTCCATACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CAAAAGTTGAACTTCCAACTGGCAGGCAGCCCATTCAATAGATGTCTTGTCCTTACTCCATATAAGGGCTaGCATTATAAACGAAACCTC +
Preference number: 4 (lower is better)
Translates to: QKLNFQLAGSPFNRCLVLTPYKG*HYKRNL
Trigger: GAGGTTTCGTTTATAATGTCAGCCCTTATATGGAGT...AAGGACAAGACATCTATTGAATGGGCTGCCTGCCAGTTGGAAGTTCAACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR TCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTTATATATGGCAATGGTaGCTAAAGAGTCTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTYIWQW*LKSLFG
Trigger: TCCAAACAGACTCTTTAGTCACCATTGCCATATATA...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCACAGAAAAATCTTCCTaGACCTCATGGCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQITEKSS*TSWLSP
Trigger: TGGGCTAAGCCATGAGGTTCAGGAAGATTTTTCTGT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAGATCAAGCTCTGGTGTaGAGAGTCCAGTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQDQALV*RVQWDR
Trigger: TCTATCCCACTGGACTCTTCACACCAGAGCTTGATC...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAATTCCTCATCTCCACCTaGGACCACCTCAGTCTAGAT +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQFLIST*DHLSLD
Trigger: ATCTAGACTGAGGTGGTCTCAGGTGGAGATGAGGAA...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCTGGCAGCAAGAGAAATaGGTAAGATGCAAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIWQQEK*VRCKSG
Trigger: TCCGCTTTTGCATCTTACTCATTTCTCTTGCTGCCA...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTTGAAGATGAGTGCTTaGTGGCAGCATCAAACAGAA +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINLKMSA*WQHQTE
Trigger: TTCTGTTTGATGCTGCCACCAAGCACTCATCTTCAA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCAGTATTTTAACCATTaGTGTGAAGCCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINQYFNH*CEACSS
Trigger: GCTGGAACAGGCTTCACACCAATGGTTAAAATACTG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCTTCTGTAAATGGCACTaGTCCACAAATGCAGACGAG +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIFCKWH*STNADE
Trigger: CTCGTCTGCATTTGTGGACCAGTGCCATTTACAGAA...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGTGGGCGTCTGTAATTTaGGGAATATTAATATTGTGT +
Preference number: 4 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILWASVI*GILILC
Trigger: ACACAATATTAATATTCCCCAAATTACAGACGCCCA...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTAGGTGGATGGTGGGGTaGTATGCAGGAAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNARWMVG*YAGSKW
Trigger: CCATTTACTTCCTGCATACCACCCCACCATCCACCT...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTCCCACGTATAACACATaGGAATTATGGGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTPTYNT*ELWEYN
Trigger: ATTATACTCCCATAATTCCCATGTGTTATACGTGGG...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp GTGACAGTAAAAGAAATCTTTGAAAGTAATGTCTCAGCCCACTATAGGTCCTGGGCATGGATTCATAATTaGCCCAACGATGAACCTGAT +
Preference number: 4 (lower is better)
Translates to: VTVKEIFESNVSAHYRSWAWIHN*PNDEPD
Trigger: ATCAGGTTCATCGTTGGGTCAATTATGAATCCATGC...CCAGGACCTATAGTGGGCTGAGACATTACTTTCAAAGATTTCTTTTACTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACGCTGATCTGAATCTGTaGAAGTATTTGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINADLNL*KYLTVA
Trigger: TGCAACTGTCAAATACTTTCACAGATTCAGATCAGC...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCGAAAAGAGGTTTAATTaGCTCACAGTTCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIEKRFN*LTVLHG
Trigger: GCCATGCAGAACTGTGAGTCAATTAAACCTCTTTTC...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCAGTATGAGGGAAACTaGCCCCATGATTCAAATTAT +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINQYEGN*PHDSNY
Trigger: ATAATTTGAATCATGGGGGCAGTTTCCCTCATACTG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAATTACTAGGTGGATGGTaGGGTGGTATGCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQLLGGW*GGMQEV
Trigger: TACTTCCTGCATACCACCCCACCATCCACCTAGTAA...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCATTCAAGATGAGATTTaGGTGGTGACACAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIIQDEI*VVTQSQ
Trigger: TTGGCTCTGTGTCACCACCCAAATCTCATCTTGAAT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCAAAAGCCTCGTATCATaGGTAACATCTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIKSLVS*VTSSLE
Trigger: TTCCAAGGAAGATGTTACTCATGATACGAGGCTTTT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTCAGCTTCACTTTCCTaGGACTGGGTATATCAGTCA +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNASASLS*DWVYQS
Trigger: TGACTGATATACCCAGTCTCAGGAAAGTGAAGCTGA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCATCTGTGAAAGTATTTaGCAGTTGCACAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIICESI*QLHKAA
Trigger: TGCTGCTTTGTGCAACTGTCAAATACTTTCACAGAT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCACTGCCAAAACTACTaGAATAGTTTAGCATATACC +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINHCQNY*NSLAYT
Trigger: GGTATATGCTAAACTATTTCAGTAGTTTTGGCAGTG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACGACAGCTCTTCATTATaGTGTAAAACTATGGATCTC +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINDSSSL*CKTMDL
Trigger: GAGATCCATAGTTTTACAGCATAATGAAGAGCTGTC...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp GTCCTTGCTCACAGTGCTGTGACAGTAAAAGAAATCTTTGAAAGTAATGTCTCAGATCCTTTCCACTTTTaGTCAGTCGAATCCAATCCA +
Preference number: 4 (lower is better)
Translates to: VLAHSAVTVKEIFESNVSDPFHF*SVESNP
Trigger: TGGATTGGATTCGACTGACCAAAAGTGGAAAGGATC...TGAGACATTACTTTCAAAGATTTCTTTTACTGTCACAGCACTGTGAGCAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACGAACCAATCATAGCTTaGATAACTAGGACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINEPIIA*ITRTFF
Trigger: AAAGAAGGTCCTAGTTATCCAAGCTATGATTGGTTC...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTAAACATGTTGCCCAATaGGCACTTGAAGATGAGTGC +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAKHVAQ*ALEDEC
Trigger: GCACTCATCTTCAAGTGCCCATTGGGCAACATGTTT...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp GCACATAGGAAGCTTCACAAGCTGGGCGTCTGTAATTaGGGGAATATTAATATTGTGTTCCTCTTGAGTATA +
Preference number: 4 (lower is better)
Translates to: AHRKLHKLGVCN*GNINIVFLLSI
Trigger: TATACTCAAGAGGAACACAATATTAATATTCCCCAAATTACAGACGCCCAGCTTGTGAAGCTTCCTATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp GTGATAAACTATACTCCTATCTGTGCTCCTCAGTATTaGGTTGCATTCATTGGAAGACTGAGGCTCTACTTA +
Preference number: 4 (lower is better)
Translates to: VINYTPICAPQY*VAFIGRLRLYL
Trigger: TAAGTAGAGCCTCAGTCTTCCAATGAATGCAACCAAATACTGAGGAGCACAGATAGGAGTATAGTTTATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp GCTAGTTACTTCCTAGATACAATGAGGGTACAGGTATaGGGTAAATACAGCCATTCCAAATGGGAGAAATTG +
Preference number: 4 (lower is better)
Translates to: ASYFLDTMRVQV*GKYSHSKWEKL
Trigger: CAATTTCTCCCATTTGGAATGGCTGTATTTACCCAATACCTGTACCCTCATTGTATCTAGGAAGTAACTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTGAGAGACTGAAAGCATaGGATTCATCCACTAATGCT +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAERLKA*DSSTNA
Trigger: AGCATTAGTGGATGAATCTCATGCTTTCAGTCTCTC...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACAGATACAGGTGTATATaGCTTTACTATTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINRYRCI*LYYFCT
Trigger: GGTACAGAAATAGTAAAGCCATATACACCTGTATCT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTTTTCCCCATTGTCTTaGAAATTAACATTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINFSPLS*KLTFSS
Trigger: GGAACTGAATGTTAATTTCCAAGACAATGGGGAAAA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAAACCATCAGATCTCATaGGAACTCACTTACCATCAT +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQNHQIS*ELTYHH
Trigger: ATGATGGTAAGTGAGTTCTCATGAGATCTGATGGTT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAAATTGCCCTCAGGACTaGTTACAGAAACAAAATCTC +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQNCPQD*LQKQNL
Trigger: GAGATTTTGTTTCTGTAAGCAGTCCTGAGGGCAATT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAAATAGGAGATTCTGTTaGTTGGGAAAGGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQNRRFC*LGKERE
Trigger: TTCTCTCTCCTTTCCCAAGCAACAGAATCTCCTATT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp CCATCAAAGATGTCAACACCCAAATGCCTGCAACCTTaGAATATATTATATAGGAAAAGGGACTTTACAGCT +
Preference number: 4 (lower is better)
Translates to: PSKMSTPKCLQP*NILYRKRDFTA
Trigger: AGCTGTAAAGTCCCTTTTCCTATATAATATATTCAAAGGTTGCAGGCATTTGGGTGTTGACATCTTTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAATTCAGAAATAGGTGCTaGGAGAACAAATTCAACATC +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQFRNRC*ENKFNI
Trigger: GATGTTGAATTTGTTCTCTCAGCACCTATTTCTGAA...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTCCTCATTTTTCCAGCTaGTTTAGATGGACTAAAGAA +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAPHFSS*FRWTKE
Trigger: TTCTTTAGTCCATCTAAATCAGCTGGAAAAATGAGG...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTATGGATATTGAAAACTaGAGCTCAGCTGATTCTCAA +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAMDIEN*SSADSQ
Trigger: TTGAGAATCAGCTGAGCTTCAGTTTTCAATATCCAT...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR TCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTTTAAAGCTCCAAAATaGTCTCCTTTTACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAFKAPK*SPFTPG
Trigger: ACCTGGAGTAAAAGGAGATCATTTTGGAGCTTTAAA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAATGTCAACACCCAAATaGCTGCAACCTTTGAATATA +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQMSTPK*LQPLNI
Trigger: TATATTCAAAGGTTGCAGGCATTTGGGTGTTGACAT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTAAAAAGGGGTTTAATTaGACTTACAGTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAKKGFN*TYSSTW
Trigger: CCATGTGGAACTGTAAGTCCAATTAAACCCCTTTTT...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR GCA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAAGTCTATTTTCACACTaGTATAAAGAACTACCTGAG +
Preference number: 4 (lower is better)
Translates to: KAEFASKCDFERNSSSLQSLFSH*YKELPE
Trigger: CTCAGGTAGTTCTTTATAGCAGTGTGAAAATAGACT...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CCA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTGGATGTATACTCTCTaGTGCTCTTTCAACATTAAT +
Preference number: 4 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNAWMYTL*CSFNIN
Trigger: ATTAATGTTGAAAGAGCACCAGAGAGTATACATCCA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp AAATTAGTCACTCCCATTTGGGAATTAACATGTAAGTaGATAAAATCATGTCAGTGGAGATTACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLVTPIWELTCK*IKSCQWRLPRR
Trigger: TCTCCTGGGTAATCTCCACTGACATGATTTTATCAACTTACATGTTAATTCCCAAATGGGAGTGACTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
3UTR CAA 72 bp TTTTCCCCATTGTCTTGGAAATTAACATTCAGTTCCTaGTTACTTATGCAAATATCTACAGCCAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FSPLSWKLTFSS*LLMQISTASLN
Trigger: ATTCAAGCTGGCTGTAGATATTTGCATAAGTAACAAGGAACTGAATGTTAATTTCCAAGACAATGGGGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCAAATTTGAGAGGAGATTaGGGTGAGGACACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPNLRGD*GEDTEP
Trigger: TGGCTCTGTGTCCTCACCCAAATCTCCTCTCAAATT...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCCCTAGCCGAGGTTCTCCATTTCATGGGCTGGTGTaGAGTATCTGCAGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RGLQPHISLLHCPSRGSPFHGLV*SICSFS
Trigger: GGAAAAGCTGCAGATACTCAACACCAGCCCATGAAA...TGGAGAACCTCGGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCGCCAGCATAATGAAGTaGACTCTTTTGGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGASIMK*TLLGWV
Trigger: CACCCACCCCAAAAGAGTCAACTTCATTATGCTGGC...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCATGAAGTTGACTCTTTaGGGGTGGGTGTCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGMKLTL*GWVSKL
Trigger: GAGCTTTGACACCCACCCCAAAAGAGTCAACTTCAT...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCAGATCACAGAGCAGGTaGTACCCATGCCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVARSQSR*YPCLCQ
Trigger: CTGGCAAAGGCATGGGTACAACCTGCTCTGTGATCT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCTACCAAGTTCCAAAGTaGCTTCCACATTTCCCGGTA +
Preference number: 5 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGYQVPK*LPHFPV
Trigger: TACCGGGAAATGTGGAAGCAACTTTGGAACTTGGTA...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGAAGTGTATCTGTCACTaGGCTCTTGGGAAGCATGCC +
Preference number: 5 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILKCICH*ALGKHA
Trigger: GGCATGCTTCCCAAGAGCCAAGTGACAGATACACTT...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCCTGGAGAAGGGGACATaGATGTTGATTCCTAATAGT +
Preference number: 5 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGLEKGT*MLIPNS
Trigger: ACTATTAGGAATCAACATCAATGTCCCCTTCTCCAG...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCGGAAGAACTGGTTCCTaGAACTCTGAGAGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAGRTGS*NSESKE
Trigger: TTCCTTACTCTCAGAGTTCAAGGAACCAGTTCTTCC...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCTGCTGAACCACCAGTaGTGGAGAAAGCAGCCAACC +
Preference number: 5 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINLLNHQ*WRKQPT
Trigger: GGTTGGCTGCTTTCTCCACAACTGGTGGTTCAGCAG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCAACATCACATGGAAGTaGCCAAGGCTTAAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCNITWK*PRLKAF
Trigger: GAAAGCCTTAAGCCTTGGCAACTTCCATGTGATGTT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CTGAACCACCAGTTGTGGAGAAAGCAGCCAACCAGGGGAAGAACCATTCAAGGCATGCAGACGAGAACTTaGGATTTGTCCAAATTTCTT +
Preference number: 5 (lower is better)
Translates to: LNHQLWRKQPTRGRTIQGMQTRT*DLSKFL
Trigger: AAGAAATTTGGACAAATCCAAAGTTCTCGTCTGCAT...GCCTTGAATGGTTCTTCCCCTGGTTGGCTGCTTTCTCCACAACTGGTGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CCCCATTTCTTGACTTCTGTGCACCCACATGCTCAACATCACATGGAAGTTGCCATGCCGCCAGTCTCTTaGCTAAATCATAACAAGAGT +
Preference number: 5 (lower is better)
Translates to: PHFLTSVHPHAQHHMEVAMPPVS*LNHNKS
Trigger: ACTCTTGTTATGATTTAGCAAAGAGACTGGCGGCAT...GGCAACTTCCATGTGATGTTGAGCATGTGGGTGCACAGAAGTCAAGAAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS CCA 90 bp GTAAAAGAAATCTTTGAAAGTAATGTCTCAGCCCACTATAGGTCCTaGTGTCTATCTCCATCCTCAGCTCTACAGGTGCCAGAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: VKEIFESNVSAHYRS*CLSPSSALQVPEFA
Trigger: GGCAAACTCTGGCACCTGTAGAGCTGAGGATGGAGATAGACACCAGGACCTATAGTGGGCTGAGACATTACTTTCAAAGATTTCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CAA 90 bp ATCTGCAGCTTTTCCAGGCACCTGGTACAAGCTGTAAGTCGATCTACCATTCTGTGTGCTCCTCAGTATTaGGTTGCATTCATTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ICSFSRHLVQAVSRSTILCAPQY*VAFIGR
Trigger: TCTTCCAATGAATGCAACCAAATACTGAGGAGCACA...CAGAATGGTAGATCGACTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCATTTCCCGGTATCTTaGCAGCAACACCTGCTCTAC +
Preference number: 5 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINHFPVS*QQHLLY
Trigger: GTAGAGCAGGTGTTGCTGCAAAGATACCGGGAAATG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTCACTTGAGTCACCTCTaGAATGCTTTGCTGCTTAGA +
Preference number: 5 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTHLSHL*NALLLR
Trigger: TCTAAGCAGCAAAGCATTCAAGAGGTGACTCAAGTG...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACCCCAAACCCCATTTCTaGACTTCTGTGCACCCACAT +
Preference number: 5 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINPKPHF*TSVHPH
Trigger: ATGTGGGTGCACAGAAGTCAAGAAATGGGGTTTGGG...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACTCTGTCACTTGGCTCTaGGGAAGCATGCCATTTAAG +
Preference number: 5 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINSVTWL*GSMPFK
Trigger: CTTAAATGGCATGCTTCCCAAGAGCCAAGTGACAGA...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTTGTGGGAATTACAATTaGAGAGGAGATTTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTCGNYN*RGDLGE
Trigger: CTCACCCAAATCTCCTCTCAAATTGTAATTCCCACA...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AGCTTGTGTGGTTCAGAAGGTAGATCACAGAGCAGGTTGTACCCATGCCTTTGCACCATATCAGGATGTTaGGGTTGTTTCCACATTTTA +
Preference number: 5 (lower is better)
Translates to: SLCGSEGRSQSRLYPCLCTISGC*GCFHIL
Trigger: TAAAATGTGGAAACAACCCAAACATCCTGATATGGT...GCAAAGGCATGGGTACAACCTGCTCTGTGATCTACCTTCTGAACCACACAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp GTCCTTGCTCACAGTGCTGTGACAGTAAAAGAAATCTTTGAAAGTAATGTCTCATACAGGTGCCAGAGTTaGCCTTTCAGAACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: VLAHSAVTVKEIFESNVSYRCQS*PFRTAG
Trigger: ACCTGCTGTTCTGAAAGGCAAACTCTGGCACCTGTA...TGAGACATTACTTTCAAAGATTTCTTTTACTGTCACAGCACTGTGAGCAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCTTGAAGATGAGTGCTaGGTGGCAGCATCAAACAGA +
Preference number: 5 (lower is better)
Translates to: FFHQIPLIISLKFRVPQILEDEC*VAASNR
Trigger: TCTGTTTGATGCTGCCACCAAGCACTCATCTTCAAG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AACCATATCAGGATGTTTGGGTTGTTTCCACATTTTAACTCTACGTGTAATGCTTTGCCCAATGGGCACTaGAAGATGAGTGCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: NHIRMFGLFPHFNSTCNALPNGH*KMSAWW
Trigger: CCACCAAGCACTCATCTTCAAGTGCCCATTGGGCAA...AGCATTACACGTAGAGTTAAAATGTGGAAACAACCCAAACATCCTGATATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACGACGCTGGCCCAATATaGTTGCATTCAACCACATTT +
Preference number: 5 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINDAGPI*LHSTTF
Trigger: AAATGTGGTTGAATGCAACAATATTGGGCCAGCGTC...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCATGATGATGGTGGAATaGGCTACAGAAGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIMMMVE*ATEDRG
Trigger: GCCTCTGTCTTCTGTAGCCAATTCCACCATCATCAT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CCAAAAGTCCACAGTTCAAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACTAAAAGCAGTGAACTCTaGCTAGGGCAAGAAAGATAT +
Preference number: 5 (lower is better)
Translates to: PKVHSSKVSSETRQVPSTKSSEL*LGQERY
Trigger: ATATCTTTCTTGCCCTAGCAAGAGTTCACTGCTTTT...AGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTTGAACTGTGGACTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS CCA 90 bp GTTGAGATCATGCAGCAACCTTACTCCTTGTTCTGTAAATGGCACTaGTCCACAAATGCAGACGAGAACTTTGGATTTGTCCAAATTTCT +
Preference number: 5 (lower is better)
Translates to: VEIMQQPYSLFCKWH*STNADENFGFVQIS
Trigger: AGAAATTTGGACAAATCCAAAGTTCTCGTCTGCATTTGTGGACCAGTGCCATTTACAGAACAAGGAGTAAGGTTGCTGCATGATCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCAGATCCTTTCCACTTTaGGTCAGTCGAATCCAATCC +
Preference number: 5 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIRSFPL*VSRIQS
Trigger: GGATTGGATTCGACTGACCAAAAGTGGAAAGGATCT...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AAATCTTTGAAAGTAATGTCTCAGCCCACTATAGGTCCTGGTGTCTATCTCCATCATTCAATAGATGTCTaGTCCTTGCTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: KSLKVMSQPTIGPGVYLHHSIDV*SLLTVL
Trigger: CAGCACTGTGAGCAAGGACAAGACATCTATTGAATG...ATGGAGATAGACACCAGGACCTATAGTGGGCTGAGACATTACTTTCAAAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CAA 90 bp AAATCTTTGAAAGTAATGTCTCAGCCCACTATAGGTCCTGGTGTCTATCTCCATCTGACTTTACAAAAGTaGAACTTCCAACTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: KSLKVMSQPTIGPGVYLHLTLQK*NFQLAG
Trigger: GCCTGCCAGTTGGAAGTTCAACTTTTGTAAAGTCAG...ATGGAGATAGACACCAGGACCTATAGTGGGCTGAGACATTACTTTCAAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CAA 90 bp GTCCTTGCTCACAGTGCTGTGACAGTAAAAGAAATCTTTGAAAGTAATGTCTCAAGATCCTTTCCACTTTaGGTCAGTCGAATCCAATCC +
Preference number: 5 (lower is better)
Translates to: VLAHSAVTVKEIFESNVSRSFPL*VSRIQS
Trigger: GGATTGGATTCGACTGACCAAAAGTGGAAAGGATCT...TGAGACATTACTTTCAAAGATTTCTTTTACTGTCACAGCACTGTGAGCAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCTTTGGCATTCTGTTTaGAGGTCTGCTAAACTTGCA +
Preference number: 5 (lower is better)
Translates to: FFHQIPLIISLKFRVPQILWHSV*RSAKLA
Trigger: TGCAAGTTTAGCAGACCTCAAAACAGAATGCCAAAG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCATAAGGCAATGCTGTaGAAAAGTCTGGTGATGATC +
Preference number: 5 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIHKAML*KSLVMI
Trigger: GATCATCACCAGACTTTTCAACAGCATTGCCTTATG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCTGGGCGTCTGTAATTaGGGGAATATTAATATTGTG +
Preference number: 5 (lower is better)
Translates to: FFHQIPLIISLKFRVPQILGVCN*GNINIV
Trigger: CACAATATTAATATTCCCCAAATTACAGACGCCCAG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp CAAATGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGAAATTAACAAGGGGACATTGATGTaGATTCCTAATAGTTCTAGA +
Preference number: 5 (lower is better)
Translates to: QMSLTCPGDIFPIVLEINKGTLM*IPNSSR
Trigger: TCTAGAACTATTAGGAATCAACATCAATGTCCCCTT...GTTAATTTCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp TTCTTCCACCAGATACCCTTAATCATCTCTCTCAAGTTCAGAGTTCCACAAATCCAAGCAAATGTGACTTaGAGCGTAATTCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FFHQIPLIISLKFRVPQIQANVT*SVILLH
Trigger: GTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTG...GATTTGTGGAACTCTGAACTTGAGAGAGATGATTAAGGGTATCTGGTGGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAATTGGATATTTTAAAATaGCCCTCAGGACTGCTTACA +
Preference number: 5 (lower is better)
Translates to: KAEFASKCDFERNSSSLQLDILK*PSGLLT
Trigger: TGTAAGCAGTCCTGAGGGCAATTTTAAAATATCCAA...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS-3UTR CAA 90 bp AAAGCAGAATTTGCAAGCAAATGTGACTTTGAGCGTAATTCTTCTTCACTGCAAGAGACATTTTCCCCATaGTCTTGGAAATTAACATTC +
Preference number: 5 (lower is better)
Translates to: KAEFASKCDFERNSSSLQETFSP*SWKLTF
Trigger: GAATGTTAATTTCCAAGACAATGGGGAAAATGTCTC...TTGCAGTGAAGAAGAATTACGCTCAAAGTCACATTTGCTTGCAAATTCTGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS TCA 90 bp TTATCAAAAAGTAGATGTATTTATTGTTGGGAAGAACTGGTTCCTTaGACTCTGAGAGTAAGGAACCAGATACAGGTGTATATGGCTTTA +
Preference number: 5 (lower is better)
Translates to: LSKSRCIYCWEELVP*TLRVRNQIQVYMAL
Trigger: TAAAGCCATATACACCTGTATCTGGTTCCTTACTCTCAGAGTTCAAGGAACCAGTTCTTCCCAACAATAAATACATCTACTTTTTGATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369681.10
ENST00000479164.1
CDS CCA 72 bp GCGACACGCTGCTGCGACCTGGGGGCCGGGAAAGACTaGGAAGGGACGTTCAGCATCTTCAAACCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: ATRCCDLGAGKD*EGTFSIFKPRP
Trigger: GGGCCGGGGTTTGAAGATGCTGAACGTCCCTTCCCAGTCTTTCCCGGCCCCCAGGTCGCAGCAGCGTGTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369679.4
ENST00000369681.10
CDS CCA 72 bp ATCTTTGAAAGTAATGTCTCAGCCCACTATAGGTCCTaGTGTCTATCTCCATCCTCAGCTCTACAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: IFESNVSAHYRS*CLSPSSALQVP
Trigger: TGGCACCTGTAGAGCTGAGGATGGAGATAGACACCAGGACCTATAGTGGGCTGAGACATTACTTTCAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369679.4
CDS CCA 72 bp ATGTTGCCCAATGGGCACTTGAAGATGAGTGCTTGGTaGCAGCATCAAACAGAAAAGCCTCGTATCATGAGT +
Preference number: 6 (lower is better)
Translates to: MLPNGHLKMSAW*QHQTEKPRIMS
Trigger: ACTCATGATACGAGGCTTTTCTGTTTGATGCTGCCACCAAGCACTCATCTTCAAGTGCCCATTGGGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369681.10
ENST00000479164.1
CDS CCA 72 bp GAGATCATGCAGCAACCTTACTCCTTGTTCTGTAAATaGCACTGGTCCACAAATGCAGACGAGAACTTTGGA +
Preference number: 6 (lower is better)
Translates to: EIMQQPYSLFCK*HWSTNADENFG
Trigger: TCCAAAGTTCTCGTCTGCATTTGTGGACCAGTGCCATTTACAGAACAAGGAGTAAGGTTGCTGCATGATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS CAA 72 bp AACCTGCCTTTTAATCCCGTTAGATCCTTTCCACTTTaGGTCAGTCGAATCCAATCCATAAGGCTTCTGCCC +
Preference number: 6 (lower is better)
Translates to: NLPFNPVRSFPL*VSRIQSIRLLP
Trigger: GGGCAGAAGCCTTATGGATTGGATTCGACTGACCAAAAGTGGAAAGGATCTAACGGGATTAAAAGGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369679.4
ENST00000369681.10
CDS CCA 72 bp ATGCAGCAACCTTACTCCTTGTTCTGTAAATGGCACTaGTCCACAAATGCAGACGAGAACTTTGGATTTGTC +
Preference number: 6 (lower is better)
Translates to: MQQPYSLFCKWH*STNADENFGFV
Trigger: GACAAATCCAAAGTTCTCGTCTGCATTTGTGGACCAGTGCCATTTACAGAACAAGGAGTAAGGTTGCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS CAA 90 bp ACTTCAATTAACCTGCCTTTTAATCCCGTTAGATCCTTTCCACTTTaGGTCAGTCGAATCCAATCCATAAGGCTTCTGCCCTGTTTTAAA +
Preference number: 6 (lower is better)
Translates to: TSINLPFNPVRSFPL*VSRIQSIRLLPCFK
Trigger: TTTAAAACAGGGCAGAAGCCTTATGGATTGGATTCGACTGACCAAAAGTGGAAAGGATCTAACGGGATTAAAAGGCAGGTTAATTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369679.4
ENST00000369681.10
CDS TCA 72 bp CATCTTCTCCACCAGGATGATACTCCATATAAGGGCTaGCATTATAAACGAAACCTCTTATGCATATCCAAC +
Preference number: 6 (lower is better)
Translates to: HLLHQDDTPYKG*HYKRNLLCISN
Trigger: GTTGGATATGCATAAGAGGTTTCGTTTATAATGTCAGCCCTTATATGGAGTATCATCCTGGTGGAGAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369679.4
ENST00000369681.10
CDS CAA 72 bp AATTCAGAAAGAAGAGCTGGTGAAATATGTCCCTGTTaGCCATTCCATTCAGAAATAGGTGCTGAGAGAACA +
Preference number: 6 (lower is better)
Translates to: NSERRAGEICPC*PFHSEIGAERT
Trigger: TGTTCTCTCAGCACCTATTTCTGAATGGAATGGCAAACAGGGACATATTTCACCAGCTCTTCTTTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS TCA 72 bp AGTAGATGTATTTATTGTTGGGAAGAACTGGTTCCTTaGACTCTGAGAGTAAGGAACCAGATACAGGTGTAT +
Preference number: 6 (lower is better)
Translates to: SRCIYCWEELVP*TLRVRNQIQVY
Trigger: ATACACCTGTATCTGGTTCCTTACTCTCAGAGTTCAAGGAACCAGTTCTTCCCAACAATAAATACATCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369681.10
ENST00000479164.1
CDS CCA 72 bp AGAAACAAAATCTCCAATCTGAAGACGATCAAGCTCTaGTGTGAAGAGTCCAGTGGGATAGATTTTTATCAA +
Preference number: 6 (lower is better)
Translates to: RNKISNLKTIKL*CEESSGIDFYQ
Trigger: TTGATAAAAATCTATCCCACTGGACTCTTCACACCAGAGCTTGATCGTCTTCAGATTGGAGATTTTGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369681.10
ENST00000479164.1
CDS CAA 90 bp CTTTTCAAAAATTCAGAAAGAAGAGCTGGTGAAATATGTCCCTGTTaGCCATTCCATTCAGAAATAGGTGCTGAGAGAACAAATTCAACA +
Preference number: 6 (lower is better)
Translates to: LFKNSERRAGEICPC*PFHSEIGAERTNST
Trigger: TGTTGAATTTGTTCTCTCAGCACCTATTTCTGAATGGAATGGCAAACAGGGACATATTTCACCAGCTCTTCTTTCTGAATTTTTGAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10
CDS CAA 72 bp GTAAATGGCACTGGTCCACAAATGCAGACGAGAACTTaGGATTTGTCCAAATTTCTTTTCAAAAATTCAGAA +
Preference number: 6 (lower is better)
Translates to: VNGTGPQMQTRT*DLSKFLFKNSE
Trigger: TTCTGAATTTTTGAAAAGAAATTTGGACAAATCCAAAGTTCTCGTCTGCATTTGTGGACCAGTGCCATTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369681.10