RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYB5R3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100243

Ensembl transcript IDs: ENST00000352397.10, ENST00000361740.8, ENST00000402438.5, ENST00000407332.5, ENST00000407623.7, ENST00000438270.1, ENST00000466276.1, ENST00000470741.1

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGGCCCTGGCACCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGG +
Preference number: 1 (lower is better)
Translates to: VGPGTCSFGLPMCVC*HPDYGPRPGMVGRR
Trigger: CCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAGGGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 90 bp AGGACCAGTAAGTGCCAGGCAGGACGTACTCTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCCCTGCTCCCGAAGGGGCTCCAGGGG +
Preference number: 1 (lower is better)
Translates to: RTSKCQAGRTLKAQP*PIWDTALLPKGLQG
Trigger: CCCCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 90 bp CTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATaGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTGGCAGCC +
Preference number: 1 (lower is better)
Translates to: LQLWAAHVCLLTSRL*STAGNGGQTGLLAA
Trigger: GGCTGCCAGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 90 bp AAGTGCCAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTaGGACACAGCCCTGCTCCCGAAGGGGCTCCAGGGGAACTGCTCA +
Preference number: 1 (lower is better)
Translates to: KCQAGRTLKAQPWPI*DTALLPKGLQGNCS
Trigger: TGAGCAGTTCCCCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 90 bp CCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCTGGCAGCCCTCAGCCTTATAGTGTG +
Preference number: 1 (lower is better)
Translates to: PCVSADIPTMVHGRE*WADGAAGSPQPYSV
Trigger: CACACTATAAGGCTGAGGGCTGCCAGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 90 bp GTGAGGGAAGGAGGGGACGGTTTAGGACAGAGGAATAAATACATGTaGTTGTGGGAGTTCTGCCATCAGGGATGGTGGCCCCAGCCCAGG +
Preference number: 1 (lower is better)
Translates to: VREGGDGLGQRNKYM*LWEFCHQGWWPQPR
Trigger: CCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTCCCCTCCTTCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR GCA 90 bp AGCCCCACACCCACCTTGCCTCATCACCTCTGTAATTTACCACCATaGAGATGGCATCCTCTGACTTTCCTGAGCCTCGAGGCTCATCTG +
Preference number: 1 (lower is better)
Translates to: SPTPTLPHHLCNLPP*RWHPLTFLSLEAHL
Trigger: CAGATGAGCCTCGAGGCTCAGGAAAGTCAGAGGATGCCATCTGCATGGTGGTAAATTACAGAGGTGATGAGGCAAGGTGGGTGTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR CCA 90 bp ACACCCACCTTGCCTCATCACCTCTGTAATTTACCACCATGCAGATaGCATCCTCTGACTTTCCTGAGCCTCGAGGCTCATCTGACCCTG +
Preference number: 1 (lower is better)
Translates to: TPTLPHHLCNLPPCR*HPLTFLSLEAHLTL
Trigger: CAGGGTCAGATGAGCCTCGAGGCTCAGGAAAGTCAGAGGATGCCATCTGCATGGTGGTAAATTACAGAGGTGATGAGGCAAGGTGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGAGCGTGAACAGGGCGTaGGGTGCGCGGGGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRSVNRA*GARGGW
Trigger: CCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCT...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGAGCGTGAACAGGGCGTaGGGTGCGCGGGGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWSVNRA*GARGGW
Trigger: CCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCT...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR TCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGTGCAGCGTCAGGTGGTaGGGCCTGGGCCTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWCSVRW*GLGLAL
Trigger: CAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCA...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR TCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTTGCGATGTGGGGAGGTaGCTGGGTGAGCGTGAACAG +
Preference number: 2 (lower is better)
Translates to: ADIPTMVHGREWWADGAACDVGR*LGEREQ
Trigger: CTGTTCACGCTCACCCAGTCACCTCCCCACATCGCA...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAGCGTGAACAGGGCGTaGGGTGCGCGGGGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGSVNRA*GARGGW
Trigger: CCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCAGGCGAGGCTGGGGTaGGCCCTGGCACCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQQARLG*ALAPAA
Trigger: AGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCTG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGGTGACAGGCGAGGCTaGGGTGGGCCCTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQGDRRG*GGPWHL
Trigger: CAGGTGCCAGGGCCCACCCCAGCCTCGCCTGTCACC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGGGTGACAGGCGAGGCTaGGGTGGGCCCTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMGDRRG*GGPWHL
Trigger: CAGGTGCCAGGGCCCACCCCAGCCTCGCCTGTCACC...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGCCCCAGTGTGCGATGTaGGGAGGTGACTGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRPQCAM*GGDWVS
Trigger: GCTCACCCAGTCACCTCCCCACATCGCACACTGGGG...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCAGCCGTGGCCCATCTaGGACACAGCCCTGCTCCCG +
Preference number: 2 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMQPWPI*DTALLP
Trigger: CGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCAGCCGTGGCCCATCTaGGACACAGCCCTGCTCCCG +
Preference number: 2 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAQPWPI*DTALLP
Trigger: CGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCAGCCGTGGCCCATCTaGGACACAGCCCTGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQQPWPI*DTALLP
Trigger: CGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTCTGGGACACAGCCCTaGTCCCGAAGGGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PQEGFLVSMSHAASGGEASGTQP*SRRGSR
Trigger: CCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGA...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTCTGGGACACAGCCCTaGTCCCGAAGGGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQSGTQP*SRRGSR
Trigger: CCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGA...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGTCTGGGACACAGCCCTaGTCCCGAAGGGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMSGTQP*SRRGSR
Trigger: CCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGA...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGATGTGGGGAGGTGACTaGGTGAGCGTGAACAGGGCG +
Preference number: 2 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRMWGGD*VSVNRA
Trigger: CGCCCTGTTCACGCTCACCCAGTCACCTCCCCACAT...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGGGACAGGGATGGGGCTaGGCGTCTCTGGTAAGGACC +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWGQGWG*ASLVRT
Trigger: GGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCC...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR CCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLVHGRE*WADGAA
Trigger: AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGAC...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGVHGRE*WADGAA
Trigger: AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGAC...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAVHGRE*WADGAA
Trigger: AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGAC...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACAGGCGAGGCTGGGGTaGGCCCTGGCACCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGQARLG*ALAPAA
Trigger: AGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCTG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGAGCCTCGCGGTGCATTaGGGTGACTGGGGTTGCGTG +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWSLAVH*GDWGCV
Trigger: CACGCAACCCCAGTCACCCCAATGCACCGCGAGGCT...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR TCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACAGGCAGGACGTACTCTaGAGGCTCAGCCGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PAALGCPCVSADIPTMVHRQDVL*RLSRGP
Trigger: TGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCT...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGTCTGGGACACAGCCCTaGTCCCGAAGGGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGSGTQP*SRRGSR
Trigger: CCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGA...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCCCCAGTGTGCGATGTaGGGAGGTGACTGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQPQCAM*GGDWVS
Trigger: GCTCACCCAGTCACCTCCCCACATCGCACACTGGGG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCCCCAGTGTGCGATGTaGGGAGGTGACTGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: PAALGCPCVSADIPTMVHPQCAM*GGDWVS
Trigger: GCTCACCCAGTCACCTCCCCACATCGCACACTGGGG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCC +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQLKAQP*PIWDTA
Trigger: GGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGGACAGGGATGGGGCTaGGCGTCTCTGGTAAGGACC +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQGQGWG*ASLVRT
Trigger: GGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGGACAGGGATGGGGCTaGGCGTCTCTGGTAAGGACC +
Preference number: 2 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAGQGWG*ASLVRT
Trigger: GGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGACAGGGATGGGGCTaGGCGTCTCTGGTAAGGACC +
Preference number: 2 (lower is better)
Translates to: PAALGCPCVSADIPTMVHGQGWG*ASLVRT
Trigger: GGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCC...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGVHGRE*WADGAA
Trigger: AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGAC...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CAA 90 bp AGCTGGTTCCAACGGCAGGGCCTTTGCGTCTGCTGTTTCCACCATTaGAACACCCACCCACCCCAGCATGGCCAGCTCTCTCTTCCCGTC +
Preference number: 2 (lower is better)
Translates to: SWFQRQGLCVCCFHH*NTHPPQHGQLSLPV
Trigger: GACGGGAAGAGAGAGCTGGCCATGCTGGGGTGGGTGGGTGTTCAAATGGTGGAAACAGCAGACGCAAAGGCCCTGCCGTTGGAACCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR TCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTGCGATGTGGGGAGGTaGCTGGGTGAGCGTGAACAG +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQCDVGR*LGEREQ
Trigger: CTGTTCACGCTCACCCAGTCACCTCCCCACATCGCA...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR TCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACTGCGATGTGGGGAGGTaGCTGGGTGAGCGTGAACAG +
Preference number: 2 (lower is better)
Translates to: PAALGCPCVSADIPTMVHCDVGR*LGEREQ
Trigger: CTGTTCACGCTCACCCAGTCACCTCCCCACATCGCA...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGATGTGGGGAGGTGACTaGGTGAGCGTGAACAGGGCG +
Preference number: 2 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMMWGGD*VSVNRA
Trigger: CGCCCTGTTCACGCTCACCCAGTCACCTCCCCACAT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTACTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCC +
Preference number: 2 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLLKAQP*PIWDTA
Trigger: GGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAG...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCC +
Preference number: 2 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVLKAQP*PIWDTA
Trigger: GGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCTGACATCCCGACTATaGTCCACGGCCGGGAATGGT +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWLTSRL*STAGNG
Trigger: ACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACCCCAGTGTGCGATGTaGGGAGGTGACTGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGPQCAM*GGDWVS
Trigger: GCTCACCCAGTCACCTCCCCACATCGCACACTGGGG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCTGACATCCCGACTATaGTCCACGGCCGGGAATGGT +
Preference number: 2 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQLTSRL*STAGNG
Trigger: ACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGTTGCGTGGTTTCAGCTaGTTTGCCTCTGGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWLRGFS*FASGGW
Trigger: CCAACCCCCAGAGGCAAACCAGCTGAAACCACGCAA...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR-3UTR TCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGATGCGATGTGGGGAGGTaGCTGGGTGAGCGTGAACAG +
Preference number: 2 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGCDVGR*LGEREQ
Trigger: CTGTTCACGCTCACCCAGTCACCTCCCCACATCGCA...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGTAAGGACCAGTAAGTaGCAGGCAGGACGTACTCTG +
Preference number: 2 (lower is better)
Translates to: CPCVSADIPTMVHGREWWVRTSK*QAGRTL
Trigger: CAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTAC...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCCTGCAGCTTTGGGCTaGCCATGTGTGTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVPAALG*PCVSAD
Trigger: GTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACCTGCAGCTTTGGGCTaGCCATGTGTGTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAPAALG*PCVSAD
Trigger: GTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGATGGGGTAGGGAGCAGTaGCCCCAAGAGGGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGWGREQ*PQEGFL
Trigger: CAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCTGACATCCCGACTATaGTCCACGGCCGGGAATGGT +
Preference number: 2 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGLTSRL*STAGNG
Trigger: ACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCTGACATCCCGACTATaGTCCACGGCCGGGAATGGT +
Preference number: 2 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVLTSRL*STAGNG
Trigger: ACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGTGGCACCTGCAGCTTTaGGCTGCCCATGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVWHLQL*AAHVCL
Trigger: CAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCA...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGGGCTGCCTCAGTGTTTaGATGGGCTGGAAGGAAATG +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWGCLSV*MGWKEM
Trigger: CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCC...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR CAA 90 bp AGGGAAGGAGGGGACGGTTTAGGACAGAGGAATAAATACATGTGGTaGTGGGAGTTCTGCCATCAGGGATGGTGGCCCCAGCCCAGGACC +
Preference number: 2 (lower is better)
Translates to: REGGDGLGQRNKYMW*WEFCHQGWWPQPRT
Trigger: GGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTCCCCTCCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR TCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCA +
Preference number: 2 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVPMCVC*HPDYGP
Trigger: TGGACCATAGTCGGGATGTCAGCAGACACACATGGG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR GCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACCTGCAGCTTTGGGCTaGCCATGTGTGTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGPAALG*PCVSAD
Trigger: GTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR TCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCA +
Preference number: 2 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGPMCVC*HPDYGP
Trigger: TGGACCATAGTCGGGATGTCAGCAGACACACATGGG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGAATACAAAAACTAGCTaGGTGTGGTGGTGGGCACTT +
Preference number: 2 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWNTKTS*VWWWAL
Trigger: AAGTGCCCACCACCACACCCAGCTAGTTTTTGTATT...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR CCA 72 bp CAGGCCAGGCTGAACCCGGGGCCCCAGTGTGCGATGTaGGGAGGTGACTGGGTGAGCGTGAACAGGGCGTGG +
Preference number: 3 (lower is better)
Translates to: QARLNPGPQCAM*GGDWVSVNRAW
Trigger: CCACGCCCTGTTCACGCTCACCCAGTCACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 72 bp ACAGGAGGCAGCAGCCTCGCGGTGCATTGGGGTGACTaGGGTTGCGTGGTTTCAGCTGGTTTGCCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: TGGSSLAVHWGD*GCVVSAGLPLG
Trigger: CCCCAGAGGCAAACCAGCTGAAACCACGCAACCCCAGTCACCCCAATGCACCGCGAGGCTGCTGCCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR TCA 72 bp GGCACCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCACGGCCGGGAATGGTG +
Preference number: 3 (lower is better)
Translates to: GTCSFGLPMCVC*HPDYGPRPGMV
Trigger: CACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR GCA 72 bp GGATGGGGCTGGGCGTCTCTGGTAAGGACCAGTAAGTaGCAGGCAGGACGTACTCTGAAGGCTCAGCCGTGG +
Preference number: 3 (lower is better)
Translates to: GWGWASLVRTSK*QAGRTLKAQPW
Trigger: CCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTACCAGAGACGCCCAGCCCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 72 bp CCTGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTaGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: PGVGSSAPKRAF*CQCLMQRQVVR
Trigger: CCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CAA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGGCACCTGCAGCTTaGGGCTGCCCATGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMLAPAA*GCPCVS
Trigger: AGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CAA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCTGGCACCTGCAGCTTaGGGCTGCCCATGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVLAPAA*GCPCVS
Trigger: AGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR-3UTR CAA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACTGGCACCTGCAGCTTaGGGCTGCCCATGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: WGREQCPQEGFLVSMSHALAPAA*GCPCVS
Trigger: AGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 72 bp CTGTTTCCACCATTTGAACACCCACCCACCCCAGCATaGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCA +
Preference number: 3 (lower is better)
Translates to: LFPPFEHPPTPA*PALSSRPSPNP
Trigger: TGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGTGGGTGGGTGTTCAAATGGTGGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR CCA 72 bp GACGGTTTAGGACAGAGGAATAAATACATGTGGTTGTaGGAGTTCTGCCATCAGGGATGGTGGCCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: DGLGQRNKYMWL*EFCHQGWWPQP
Trigger: GGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR CCA 72 bp GGAGGGGACGGTTTAGGACAGAGGAATAAATACATGTaGTTGTGGGAGTTCTGCCATCAGGGATGGTGGCCC +
Preference number: 3 (lower is better)
Translates to: GGDGLGQRNKYM*LWEFCHQGWWP
Trigger: GGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
3UTR GCA 72 bp CCCACCTTGCCTCATCACCTCTGTAATTTACCACCATaGAGATGGCATCCTCTGACTTTCCTGAGCCTCGAG +
Preference number: 3 (lower is better)
Translates to: PTLPHHLCNLPP*RWHPLTFLSLE
Trigger: CTCGAGGCTCAGGAAAGTCAGAGGATGCCATCTGCATGGTGGTAAATTACAGAGGTGATGAGGCAAGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
3UTR CCA 72 bp TTGCCTCATCACCTCTGTAATTTACCACCATGCAGATaGCATCCTCTGACTTTCCTGAGCCTCGAGGCTCAT +
Preference number: 3 (lower is better)
Translates to: LPHHLCNLPPCR*HPLTFLSLEAH
Trigger: ATGAGCCTCGAGGCTCAGGAAAGTCAGAGGATGCCATCTGCATGGTGGTAAATTACAGAGGTGATGAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTGGTGACAGGCGAGGCTaGGGTGGGCCCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAGDRRG*GGPWHL
Trigger: CAGGTGCCAGGGCCCACCCCAGCCTCGCCTGTCACC...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTAGCCAAGCTCCCGGCTaGCCAGGGCCCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAASQAPG*PGPWGR
Trigger: CCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCT...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTGCCCGCCAGCGGTCCTaGCAGAATCTGAGCGGCACC +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAARQRS*QNLSGT
Trigger: GGTGCCGCTCAGATTCTGGCAGGACCGCTGGCGGGC...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGAGCCAAGCTCCCGGCTaGCCAGGGCCCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALSQAPG*PGPWGR
Trigger: CCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCT...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGTGCAGCGTCAGGTGGTaGGGCCTGGGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRCSVRW*GLGLAL
Trigger: CAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCA...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCAGCGCTCCGTGGGGTaGCCCACGTGGTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALQRSVG*PTWSRL
Trigger: CAACCTGGACCACGTGGGCCACCCCACGGAGCGCTG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGCAGGCGAGGCTGGGGTaGGCCCTGGCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRQARLG*ALAPAA
Trigger: AGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCTG...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGTGCAGCGTCAGGTGGTaGGGCCTGGGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWCSVRW*GLGLAL
Trigger: CAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCA...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTAGGCCCAGGATGTGCTaGGGTGACGGCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAARPRMC*GDGRAK
Trigger: CTTTGCCCTGCCGTCACCCCAGCACATCCTGGGCCT...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTAGACCAGCAGCCCACTaGGGCCCCGGAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAARPAAH*GPGTQW
Trigger: CCATTGAGTTCCGGGGCCCCAGTGGGCTGCTGGTCT...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGCAGCGGCTCCTCCTCTaGGGGTGGAAGGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRQRLLL*GWKVVP
Trigger: CGGGACCACCTTCCACCCCCAGAGGAGGAGCCGCTG...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGAGCGTGAACAGGGCGTaGGGTGCGCGGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQSVNRA*GARGGW
Trigger: CCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCT...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGCAGCCGTGGCCCATCTaGGACACAGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRQPWPI*DTALLP
Trigger: CGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTG...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTCTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCC +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAALKAQP*PIWDTA
Trigger: GGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAG...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRVHGRE*WADGAA
Trigger: AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGAC...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGTGCCATCAGGGATGGTaGCCCCAGCCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALCHQGW*PQPRTP
Trigger: TGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCA...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCAGGATGTGCTGGGGTaGCGGCAGGGCAAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALQDVLG*RQGKAE
Trigger: TTCCGCTTTGCCCTGCCGTCACCCCAGCACATCCTG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCCTGCAGCATCGGGGTaGTGCCTGTCCCTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWPAASG*CLSLPR
Trigger: TCGCGGGAGGGACAGGCATCACCCCGATGCTGCAGG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR TCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACTGCAGCGTCAGGTGGTaGGGCCTGGGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHCSVRW*GLGLAL
Trigger: CAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCA...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGAGGACCCCAAAACCCTaGGGCGGTGCAGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRRTPKP*GGAVGC
Trigger: GCAGCCCACTGCACCGCCTCAGGGTTTTGGGGTCCT...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGGGAGGCCCAGGATGTaGTGGGGTGACGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWGRPRM*WGDGRA
Trigger: TGCCCTGCCGTCACCCCAGCACATCCTGGGCCTCCC...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTTGGGGTAGGGAGCAGTaGCCCCAAGAGGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAWGREQ*PQEGFL
Trigger: CAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGGCAGCAGCCTCGCGGTaGATTGGGGTGACTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALAAASR*IGVTGV
Trigger: AACCCCAGTCACCCCAATGCACCGCGAGGCTGCTGC...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGGGCCCAACTGTCCCCTaGCTGCCCGCCAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMGPTVP*LPASGP
Trigger: AGGACCGCTGGCGGGCAGGCAGGGGACAGTTGGGCC...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCTCGAGGGTGATGGCTaGCGTGGAGCGCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALLEGDG*RGALEQ
Trigger: CTGTTCCAGCGCTCCACGCCAGCCATCACCCTCGAG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCAGCGGCTCCTCCTCTaGGGGTGGAAGGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWQRLLL*GWKVVP
Trigger: CGGGACCACCTTCCACCCCCAGAGGAGGAGCCGCTG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAAGCGTGAACAGGGCGTaGGGTGCGCGGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHASVNRA*GARGGW
Trigger: CCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCT...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGAGCGTGAACAGGGCGTaGGGTGCGCGGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVSVNRA*GARGGW
Trigger: CCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCT...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCCCCAGTGTGCGATGTaGGGAGGTGACTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALPQCAM*GGDWVS
Trigger: GCTCACCCAGTCACCTCCCCACATCGCACACTGGGG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWVHGRE*WADGAA
Trigger: AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGAC...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCAGGCGAGGCTGGGGTaGGCCCTGGCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHQARLG*ALAPAA
Trigger: AGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCTG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGGTGACAGGCGAGGCTaGGGTGGGCCCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAGDRRG*GGPWHL
Trigger: CAGGTGCCAGGGCCCACCCCAGCCTCGCCTGTCACC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCCCAACGTGCTGAGCTaGGCCCCCATGGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAPNVLS*APMVAP
Trigger: CGGGGCCACCATGGGGGCCCAGCTCAGCACGTTGGG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000352397.10
CDS-3UTR TCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGTGCAGCGTCAGGTGGTaGGGCCTGGGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVCSVRW*GLGLAL
Trigger: CAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCA...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGAGGACCCCAAAACCCTaGGGCGGTGCAGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWRTPKP*GGAVGC
Trigger: GCAGCCCACTGCACCGCCTCAGGGTTTTGGGGTCCT...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGTATGGCCCAACGTGCTaGGCTGGGCCCCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWYGPTC*AGPPWW
Trigger: CCACCATGGGGGCCCAGCTCAGCACGTTGGGCCATA...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352397.10
CDS-3UTR TCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGCCTGTCAGGGTCGCTaGGCACTCACAGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAACQGR*ALTAGL
Trigger: CAGCCCGGCTGTGAGTGCTCAGCGACCCTGACAGGC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR GCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTTGGCGAACTTCCCTTTaGCCTGGTAGACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAWRTSL*PGRPAA
Trigger: GGCTGCTGGTCTACCAGGGCAAAGGGAAGTTCGCCA...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGAAAACCCTGAGGCGGTaGAGTGGGCTGCCAACCCCC +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRKTLRR*SGLPTP
Trigger: GGGGGTTGGCAGCCCACTGCACCGCCTCAGGGTTTT...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCAACTGTCCCCTGCCTaGCCGCCAGCGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMQLSPA*PPAVLP
Trigger: TGGCAGGACCGCTGGCGGGCAGGCAGGGGACAGTTG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTTCTGGGGGTGGAAGGTaGTCCCGGATCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAASGGGR*SRIISS
Trigger: TGAGGAGATGATCCGGGACCACCTTCCACCCCCAGA...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCTCCTCCTCTGGGGGTaGAAGGTGGTCCCGGATCAT +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALLLLWG*KVVPDH
Trigger: ATGATCCGGGACCACCTTCCACCCCCAGAGGAGGAG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCAGCGGCTCCTCCTCTaGGGGTGGAAGGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAQRLLL*GWKVVP
Trigger: CGGGACCACCTTCCACCCCCAGAGGAGGAGCCGCTG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTGTACTGGATCATGGGTaGGGGGCCACACATCAGCAC +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAVLDHG*GATHQH
Trigger: GTGCTGATGTGTGGCCCCCCACCCATGATCCAGTAC...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCAGCGCTCCGTGGGGTaGCCCACGTGGTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMQRSVG*PTWSRL
Trigger: CAACCTGGACCACGTGGGCCACCCCACGGAGCGCTG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCGAAGCAGCGCTCCGTaGGGTGGCCCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEARSSAP*GGPRGP
Trigger: TGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTCTGACATCCCGACTATaGTCCACGGCCGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAALTSRL*STAGNG
Trigger: ACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAG...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACAGGCGAGGCTGGGGTaGGCCCTGGCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAQARLG*ALAPAA
Trigger: AGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCTG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGGGTGACAGGCGAGGCTaGGGTGGGCCCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGGDRRG*GGPWHL
Trigger: CAGGTGCCAGGGCCCACCCCAGCCTCGCCTGTCACC...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGGTGACAGGCGAGGCTaGGGTGGGCCCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVGDRRG*GGPWHL
Trigger: CAGGTGCCAGGGCCCACCCCAGCCTCGCCTGTCACC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAGCCAAGCTCCCGGCTaGCCAGGGCCCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGSQAPG*PGPWGR
Trigger: CCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCACTCACAGCCGGGCTaGGAGGCAGGGGAACCACAG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWHSQPG*EAGEPQ
Trigger: CTGTGGTTCCCCTGCCTCCCAGCCCGGCTGTGAGTG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGGGCTCTGGCTTGGCTaGGAACTGTGGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRGLWLG*ELWGKG
Trigger: TCCCTTCCCCCACAGTTCCCAGCCAAGCCAGAGCCC...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCCTGCAGCATCGGGGTaGTGCCTGTCCCTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGPAASG*CLSLPR
Trigger: TCGCGGGAGGGACAGGCATCACCCCGATGCTGCAGG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGTGCGATGTGGGGAGGTaGCTGGGTGAGCGTGAACAG +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRCDVGR*LGEREQ
Trigger: CTGTTCACGCTCACCCAGTCACCTCCCCACATCGCA...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGAGGACCCCAAAACCCTaGGGCGGTGCAGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMRTPKP*GGAVGC
Trigger: GCAGCCCACTGCACCGCCTCAGGGTTTTGGGGTCCT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGGTCCTGCCAGAATCTaGGCGGCACCTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQGPARI*AAPPSW
Trigger: CCAGGAGGGAGGTGCCGCTCAGATTCTGGCAGGACC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR GCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAGGGAGGCCCAGGATGTaGTGGGGTGACGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLGRPRM*WGDGRA
Trigger: TGCCCTGCCGTCACCCCAGCACATCCTGGGCCTCCC...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGGAGGCCCAGGATGTaGTGGGGTGACGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAGRPRM*WGDGRA
Trigger: TGCCCTGCCGTCACCCCAGCACATCCTGGGCCTCCC...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGTCCCTCCCGCGATCATaGCCACAGACTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALSLPRS*PQTSLS
Trigger: GGACAGTGAAGTCTGTGGGCATGATCGCGGGAGGGA...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTGGGAAGAGCACCATATaGCCCAACTCCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAGKSTI*PNSQLS
Trigger: AGAGAGCTGGGAGTTGGGCCATATGGTGCTCTTCCC...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGGCTGGCGTGGAGCGCTaGAACAGCTTCATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALAGVER*NSFMSR
Trigger: TCTGCTCATGAAGCTGTTCCAGCGCTCCACGCCAGC...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGAAGCGCCGGGTGTCATaGCTGATGATCTCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRKRRVS*LMISRS
Trigger: CGACCGGGAGATCATCAGCCATGACACCCGGCGCTT...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGAGGCCCAGGATGTGCTaGGGTGACGGCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWRPRMC*GDGRAK
Trigger: CTTTGCCCTGCCGTCACCCCAGCACATCCTGGGCCT...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACAGCGGCTCCTCCTCTaGGGGTGGAAGGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAQRLLL*GWKVVP
Trigger: CGGGACCACCTTCCACCCCCAGAGGAGGAGCCGCTG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGGTACTGGATCATGGGTaGGGGGCCACACATCAGCAC +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALVLDHG*GATHQH
Trigger: GTGCTGATGTGTGGCCCCCCACCCATGATCCAGTAC...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCAGCGCTCCGTGGGGTaGCCCACGTGGTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVQRSVG*PTWSRL
Trigger: CAACCTGGACCACGTGGGCCACCCCACGGAGCGCTG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCGAAGCAGCGCTCCGTaGGGTGGCCCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVRSSAP*GGPRGP
Trigger: TGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCGAAGCAGCGCTCCGTaGGGTGGCCCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGRSSAP*GGPRGP
Trigger: TGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCAGCCGTGGCCCATCTaGGACACAGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVQPWPI*DTALLP
Trigger: CGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCC +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWLKAQP*PIWDTA
Trigger: GGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGGACAGGGATGGGGCTaGGCGTCTCTGGTAAGGACC +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWGQGWG*ASLVRT
Trigger: GGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCC...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTCCACGGCCGGGAATaGTGGGCAGACGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVVHGRE*WADGAA
Trigger: AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGAC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGTGGCACCTGCAGCTTTaGGCTGCCCATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALWHLQL*AAHVCL
Trigger: CAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCA...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGTGCCATCAGGGATGGTaGCCCCAGCCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMCHQGW*PQPRTP
Trigger: TGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCA...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTTTGCGTGGTTTCAGCTaGTTTGCCTCTGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAALRGFS*FASGGW
Trigger: CCAACCCCCAGAGGCAAACCAGCTGAAACCACGCAA...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTGTGACTGGGGTTGCGTaGTTTCAGCTGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAVTGVA*FQLVCL
Trigger: GAGGCAAACCAGCTGAAACCACGCAACCCCAGTCAC...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTGTGCATTGGGGTGACTaGGGTTGCGTGGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAVHWGD*GCVVSA
Trigger: AGCTGAAACCACGCAACCCCAGTCACCCCAATGCAC...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGAGCCTCGCGGTGCATTaGGGTGACTGGGGTTGCGTG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWSLAVH*GDWGCV
Trigger: CACGCAACCCCAGTCACCCCAATGCACCGCGAGGCT...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR TCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAGCCGCAGCGGGTACTTaGTGTCCGGGCTCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGAAAGT*CPGSRG
Trigger: CCCTCGAGAGCCCGGACATCAAGTACCCGCTGCGGC...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACCTGCAGCATCGGGGTaGTGCCTGTCCCTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGPAASG*CLSLPR
Trigger: TCGCGGGAGGGACAGGCATCACCCCGATGCTGCAGG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAAGGACCCCAAAACCCTaGGGCGGTGCAGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLRTPKP*GGAVGC
Trigger: GCAGCCCACTGCACCGCCTCAGGGTTTTGGGGTCCT...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGATGGCGCGGATCACCTaGAGCATCGGGGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWMARIT*SIGVMP
Trigger: AGGCATCACCCCGATGCTGCAGGTGATCCGCGCCAT...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGATGGCGCGGATCACCTaGAGCATCGGGGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWMARIT*SIGVMP
Trigger: AGGCATCACCCCGATGCTGCAGGTGATCCGCGCCAT...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTATCTGGGACACAGCCCTaGTCCCGAAGGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLSGTQP*SRRGSR
Trigger: CCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGA...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGTGGGGTAGGGAGCAGTaGCCCCAAGAGGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWWGREQ*PQEGFL
Trigger: CAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGAAAACCCTGAGGCGGTaGAGTGGGCTGCCAACCCCC +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMKTLRR*SGLPTP
Trigger: GGGGGTTGGCAGCCCACTGCACCGCCTCAGGGTTTT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGTGGGGTGACTGGGGTTaGGTGGTTTCAGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALWGDWG*VVSAGL
Trigger: CAAACCAGCTGAAACCACGCAACCCCAGTCACCCCA...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGGCAGCAGCCTCGCGGTaGATTGGGGTGACTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMAAASR*IGVTGV
Trigger: AACCCCAGTCACCCCAATGCACCGCGAGGCTGCTGC...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGAAGCGCCGGGTGTCATaGCTGATGATCTCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWKRRVS*LMISRS
Trigger: CGACCGGGAGATCATCAGCCATGACACCCGGCGCTT...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTCCTTGTCATCATCGCTaGAGATGGGTGTATAGGGCC +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAPCHHR*RWVYRA
Trigger: GGCCCTATACACCCATCTCCAGCGATGATGACAAGG...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACAGACCAGCAGCCCACTaGGGCCCCGGAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHRPAAH*GPGTQW
Trigger: CCATTGAGTTCCGGGGCCCCAGTGGGCTGCTGGTCT...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGAGACCAGCAGCCCACTaGGGCCCCGGAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQRPAAH*GPGTQW
Trigger: CCATTGAGTTCCGGGGCCCCAGTGGGCTGCTGGTCT...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACGAAGCAGCGCTCCGTaGGGTGGCCCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGRSSAP*GGPRGP
Trigger: TGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGATGTGGGGAGGTGACTaGGTGAGCGTGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWMWGGD*VSVNRA
Trigger: CGCCCTGTTCACGCTCACCCAGTCACCTCCCCACAT...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCCCCAGTGTGCGATGTaGGGAGGTGACTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAPQCAM*GGDWVS
Trigger: GCTCACCCAGTCACCTCCCCACATCGCACACTGGGG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACAGCCGTGGCCCATCTaGGACACAGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGQPWPI*DTALLP
Trigger: CGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCC +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHLKAQP*PIWDTA
Trigger: GGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGGGACAGGGATGGGGCTaGGCGTCTCTGGTAAGGACC +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMGQGWG*ASLVRT
Trigger: GGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCC...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCATGCCATCAGGGATGGTaGCCCCAGCCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHACHQGW*PQPRTP
Trigger: TGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCA...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGAGCCTCGCGGTGCATTaGGGTGACTGGGGTTGCGTG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMSLAVH*GDWGCV
Trigger: CACGCAACCCCAGTCACCCCAATGCACCGCGAGGCT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGGGAAGAGCACCATATaGCCCAACGTGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRGKSTI*PNVLSW
Trigger: CCAGCTCAGCACGTTGGGCCATATGGTGCTCTTCCC...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352397.10
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCTAACCGGGAGGAAGTaGGAGGGAGTGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALLTGRK*EGVEEV
Trigger: AACTTCCTCCACTCCCTCCCACTTCCTCCCGGTTAG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCAGGATGTGCTGGGGTaGCGGCAGGGCAAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGQDVLG*RQGKAE
Trigger: TTCCGCTTTGCCCTGCCGTCACCCCAGCACATCCTG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCATCAGGGTCCTTCATaGTGGCGCGGATCACCTGCA +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWHQGPS*WRGSPA
Trigger: TGCAGGTGATCCGCGCCATCATGAAGGACCCTGATG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR TCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCATCAGGGTCCTTCATaGTGGCGCGGATCACCTGCA +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWHQGPS*WRGSPA
Trigger: TGCAGGTGATCCGCGCCATCATGAAGGACCCTGATG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGCGATGTGGGGAGGTaGCTGGGTGAGCGTGAACAG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEACDVGR*LGEREQ
Trigger: CTGTTCACGCTCACCCAGTCACCTCCCCACATCGCA...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAGGCAGGACGTACTCTaGAGGCTCAGCCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGRQDVL*RLSRGP
Trigger: TGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGCTGGAAGGAAATGCTaGGGTTCTGGGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAAGRKC*GSGRAP
Trigger: TGGGGCCCTCCCAGAACCTCAGCATTTCCTTCCAGC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACACCATATGGCCCAACTaGAACGACAGGACCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHTIWPN*NDRTRG
Trigger: CCCGCGGGTCCTGTCGTTTCAGTTGGGCCATATGGT...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407332.5
CDS-3UTR GCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGTCCCTCCCGCGATCATaGCCACAGACTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWSLPRS*PQTSLS
Trigger: GGACAGTGAAGTCTGTGGGCATGATCGCGGGAGGGA...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGATCTGGGACACAGCCCTaGTCCCGAAGGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGSGTQP*SRRGSR
Trigger: CCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGA...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGGTAAGGACCAGTAAGTaGCAGGCAGGACGTACTCTG +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALVRTSK*QAGRTL
Trigger: CAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTAC...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGGTAGGGAGCAGTaGCCCCAAGAGGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAWGREQ*PQEGFL
Trigger: CAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGGGGTTCCCCAAGGCTaGCTCAGTGTTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAGVPQG*LSVWMG
Trigger: GCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAAAAACCCTGAGGCGGTaGAGTGGGCTGCCAACCCCC +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLKTLRR*SGLPTP
Trigger: GGGGGTTGGCAGCCCACTGCACCGCCTCAGGGTTTT...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGAAAACCCTGAGGCGGTaGAGTGGGCTGCCAACCCCC +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVKTLRR*SGLPTP
Trigger: GGGGGTTGGCAGCCCACTGCACCGCCTCAGGGTTTT...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCCCCACCCCTTGTGTTaGAGGTCACAGACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMPHPLC*RSQTLE
Trigger: CTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCTGGCGTGGAGCGCTaGAACAGCTTCATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWAGVER*NSFMSR
Trigger: TCTGCTCATGAAGCTGTTCCAGCGCTCCACGCCAGC...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAAGGCCCAGGATGTGCTaGGGTGACGGCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHARPRMC*GDGRAK
Trigger: CTTTGCCCTGCCGTCACCCCAGCACATCCTGGGCCT...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAAGACCAGCAGCCCACTaGGGCCCCGGAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHARPAAH*GPGTQW
Trigger: CCATTGAGTTCCGGGGCCCCAGTGGGCTGCTGGTCT...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTTTTTGTCAGGTCGGATaGCGAACTTCCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAFCQVG*RTSLCP
Trigger: AGGGCAAAGGGAAGTTCGCCATCCGACCTGACAAAA...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGTCTGGGGGTGGAAGGTaGTCCCGGATCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWSGGGR*SRIISS
Trigger: TGAGGAGATGATCCGGGACCACCTTCCACCCCCAGA...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCTCCTCCTCTGGGGGTaGAAGGTGGTCCCGGATCAT +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHLLLWG*KVVPDH
Trigger: ATGATCCGGGACCACCTTCCACCCCCAGAGGAGGAG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCTCCTCCTCTGGGGGTaGAAGGTGGTCCCGGATCAT +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEALLLWG*KVVPDH
Trigger: ATGATCCGGGACCACCTTCCACCCCCAGAGGAGGAG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGGTACTGGATCATGGGTaGGGGGCCACACATCAGCAC +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWVLDHG*GATHQH
Trigger: GTGCTGATGTGTGGCCCCCCACCCATGATCCAGTAC...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCATGTGGGGAGGTGACTaGGTGAGCGTGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAMWGGD*VSVNRA
Trigger: CGCCCTGTTCACGCTCACCCAGTCACCTCCCCACAT...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGGACAGGGATGGGGCTaGGCGTCTCTGGTAAGGACC +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVGQGWG*ASLVRT
Trigger: GGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGAAATGCTGAGGTTCTaGGAGGGCCCCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQEMLRF*EGPMAS
Trigger: GCTGGCCATGGGGCCCTCCCAGAACCTCAGCATTTC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGAAATGCTGAGGTTCTaGGAGGGCCCCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAEMLRF*EGPMAS
Trigger: GCTGGCCATGGGGCCCTCCCAGAACCTCAGCATTTC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGATGCCATCAGGGATGGTaGCCCCAGCCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGCHQGW*PQPRTP
Trigger: TGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCA...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCCAAATCCATCTCCTTaGGGCCTTCCTGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMPNPSP*GLPAAP
Trigger: CGGGGCAGCAGGAAGGCCCCAAGGAGATGGATTTGG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACCACCCACCCCAGCATaGCCAGCTCTCTCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAPPTPA*PALSSR
Trigger: ACGGGAAGAGAGAGCTGGCCATGCTGGGGTGGGTGG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTACCACCCACCCCAGCATaGCCAGCTCTCTCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLPPTPA*PALSSR
Trigger: ACGGGAAGAGAGAGCTGGCCATGCTGGGGTGGGTGG...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGGCACCTCCCTCCTaGTCCTGTTCTAACCGGGAG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAAAPPS*SCSNRE
Trigger: CTCCCGGTTAGAACAGGACCAGGAGGGAGGTGCCGC...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407623.7
3UTR CAA 72 bp CAACGGCAGGGCCTTTGCGTCTGCTGTTTCCACCATTaGAACACCCACCCACCCCAGCATGGCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QRQGLCVCCFHH*NTHPPQHGQLS
Trigger: AGAGAGCTGGCCATGCTGGGGTGGGTGGGTGTTCAAATGGTGGAAACAGCAGACGCAAAGGCCCTGCCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR TCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCATCAGGGTCCTTCATaGTGGCGCGGATCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQHQGPS*WRGSPA
Trigger: TGCAGGTGATCCGCGCCATCATGAAGGACCCTGATG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCATCAGGGTCCTTCATaGTGGCGCGGATCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAHQGPS*WRGSPA
Trigger: TGCAGGTGATCCGCGCCATCATGAAGGACCCTGATG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGTGCGATGTGGGGAGGTaGCTGGGTGAGCGTGAACAG +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGCDVGR*LGEREQ
Trigger: CTGTTCACGCTCACCCAGTCACCTCCCCACATCGCA...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGGCTGGAAGGAAATGCTaGGGTTCTGGGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGAGRKC*GSGRAP
Trigger: TGGGGCCCTCCCAGAACCTCAGCATTTCCTTCCAGC...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGCTGGAAGGAAATGCTaGGGTTCTGGGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVAGRKC*GSGRAP
Trigger: TGGGGCCCTCCCAGAACCTCAGCATTTCCTTCCAGC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGCGAACTTCCCTTTaGCCTGGTAGACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAWRTSL*PGRPAA
Trigger: GGCTGCTGGTCTACCAGGGCAAAGGGAAGTTCGCCA...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGATGGCGCGGATCACCTaGAGCATCGGGGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVMARIT*SIGVMP
Trigger: AGGCATCACCCCGATGCTGCAGGTGATCCGCGCCAT...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTCCAGAGCTTGAAGCGTaGAGAATGTTTGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ADIPTMVHGREWWADGAAPELEA*RMFVPE
Trigger: CTCAGGAACAAACATTCTGCACGCTTCAAGCTCTGG...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCCTGCAGCTTTGGGCTaGCCATGTGTGTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQPAALG*PCVSAD
Trigger: GTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCCTGCAGCTTTGGGCTaGCCATGTGTGTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAPAALG*PCVSAD
Trigger: GTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGGGGTTCCCCAAGGCTaGCTCAGTGTTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVGVPQG*LSVWMG
Trigger: GCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAGGGGTTCCCCAAGGCTaGCTCAGTGTTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLGVPQG*LSVWMG
Trigger: GCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCC...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGGGTTCCCCAAGGCTaGCTCAGTGTTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAGVPQG*LSVWMG
Trigger: GCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCC...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACCCCACCCCTTGTGTTaGAGGTCACAGACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAPHPLC*RSQTLE
Trigger: CTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCAACGGCAGGGCCTTTaGGTCTGCTGTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWQRQGL*VCCFHH
Trigger: ATGGTGGAAACAGCAGACGCAAAGGCCCTGCCGTTG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGGCTGGCGTGGAGCGCTaGAACAGCTTCATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMAGVER*NSFMSR
Trigger: TCTGCTCATGAAGCTGTTCCAGCGCTCCACGCCAGC...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAAGCGCCGGGTGTCATaGCTGATGATCTCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGKRRVS*LMISRS
Trigger: CGACCGGGAGATCATCAGCCATGACACCCGGCGCTT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGAAGCGCCGGGTGTCATaGCTGATGATCTCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVKRRVS*LMISRS
Trigger: CGACCGGGAGATCATCAGCCATGACACCCGGCGCTT...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGGGCCCCGGAACTCAATaGTGTCTCCAATCTGCATGC +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWGPGTQ*CLQSAC
Trigger: GCATGCAGATTGGAGACACCATTGAGTTCCGGGGCC...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTCTGGGGGTGGAAGGTaGTCCCGGATCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQSGGGR*SRIISS
Trigger: TGAGGAGATGATCCGGGACCACCTTCCACCCCCAGA...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCTCCTCCTCTGGGGGTaGAAGGTGGTCCCGGATCAT +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVLLLWG*KVVPDH
Trigger: ATGATCCGGGACCACCTTCCACCCCCAGAGGAGGAG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGTACTGGATCATGGGTaGGGGGCCACACATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAVLDHG*GATHQH
Trigger: GTGCTGATGTGTGGCCCCCCACCCATGATCCAGTAC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAATGTGGGGAGGTGACTaGGTGAGCGTGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAMWGGD*VSVNRA
Trigger: CGCCCTGTTCACGCTCACCCAGTCACCTCCCCACAT...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACTGAAGGCTCAGCCGTaGCCCATCTGGGACACAGCC +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGLKAQP*PIWDTA
Trigger: GGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGCACCTGCAGCTTTaGGCTGCCCATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAWHLQL*AAHVCL
Trigger: CAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCA...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGAAATGCTGAGGTTCTaGGAGGGCCCCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVEMLRF*EGPMAS
Trigger: GCTGGCCATGGGGCCCTCCCAGAACCTCAGCATTTC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGAAATGCTGAGGTTCTaGGAGGGCCCCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAEMLRF*EGPMAS
Trigger: GCTGGCCATGGGGCCCTCCCAGAACCTCAGCATTTC...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACCAAATCCATCTCCTTaGGGCCTTCCTGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAPNPSP*GLPAAP
Trigger: CGGGGCAGCAGGAAGGCCCCAAGGAGATGGATTTGG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGGGAAGAGCACCATATaGCCCAACTGTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAGKSTI*PNCPLP
Trigger: AGGCAGGGGACAGTTGGGCCATATGGTGCTCTTCCC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR TCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCTGGAACAGCTTCATaGGCAGACTGTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWAGTAS*ADCTGT
Trigger: GGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGC...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQPMCVC*HPDYGP
Trigger: TGGACCATAGTCGGGATGTCAGCAGACACACATGGG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAPMCVC*HPDYGP
Trigger: TGGACCATAGTCGGGATGTCAGCAGACACACATGGG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGCAACGTCGAGGTCACTaGTATGTCCCTCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRQRRGH*YVPQTR
Trigger: TCTTGTCTGAGGGACATATCAGTGACCTCGACGTTG...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTATGGCGAACTTCCCTTTaGCCTGGTAGACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLWRTSL*PGRPAA
Trigger: GGCTGCTGGTCTACCAGGGCAAAGGGAAGTTCGCCA...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGTGGCGAACTTCCCTTTaGCCTGGTAGACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVWRTSL*PGRPAA
Trigger: GGCTGCTGGTCTACCAGGGCAAAGGGAAGTTCGCCA...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCATCCCTCCCGCGATCATaGCCACAGACTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHASLPRS*PQTSLS
Trigger: GGACAGTGAAGTCTGTGGGCATGATCGCGGGAGGGA...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAATGGCGCGGATCACCTaGAGCATCGGGGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGMARIT*SIGVMP
Trigger: AGGCATCACCCCGATGCTGCAGGTGATCCGCGCCAT...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCCTGCAGCTTTGGGCTaGCCATGTGTGTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGPAALG*PCVSAD
Trigger: GTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCAACGGCAGGGCCTTTaGGTCTGCTGTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHQRQGL*VCCFHH
Trigger: ATGGTGGAAACAGCAGACGCAAAGGCCCTGCCGTTG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCATCATCGCTGGAGATaGGTGTATAGGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHHHRWR*VYRAGR
Trigger: TCGTCCGGCCCTATACACCCATCTCCAGCGATGATG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCATCATCGCTGGAGATaGGTGTATAGGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMHHRWR*VYRAGR
Trigger: TCGTCCGGCCCTATACACCCATCTCCAGCGATGATG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCATCATCGCTGGAGATaGGTGTATAGGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAHHRWR*VYRAGR
Trigger: TCGTCCGGCCCTATACACCCATCTCCAGCGATGATG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGGCCCCGGAACTCAATaGTGTCTCCAATCTGCATGC +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQGPGTQ*CLQSAC
Trigger: GCATGCAGATTGGAGACACCATTGAGTTCCGGGGCC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGTTTTGTCAGGTCGGATaGCGAACTTCCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRFCQVG*RTSLCP
Trigger: AGGGCAAAGGGAAGTTCGCCATCCGACCTGACAAAA...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGTCTGGGGGTGGAAGGTaGTCCCGGATCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGSGGGR*SRIISS
Trigger: TGAGGAGATGATCCGGGACCACCTTCCACCCCCAGA...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTATGGCACCTGCAGCTTTaGGCTGCCCATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLWHLQL*AAHVCL
Trigger: CAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCA...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGCCCAAGAGGGCTTTCTaGTGTCAATGTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRPKRAF*CQCLMQ
Trigger: CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGG...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGGCTGCCTCAGTGTTTaGATGGGCTGGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWGCLSV*MGWKEM
Trigger: CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCC...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGAAAACTAGCTGGGTGTaGTGGTGGGCACTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALKTSWV*WWALLV
Trigger: GACTAAAAGTGCCCACCACCACACCCAGCTAGTTTT...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGTTGCGTGGTTTCAGCTaGTTTGCCTCTGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMLRGFS*FASGGW
Trigger: CCAACCCCCAGAGGCAAACCAGCTGAAACCACGCAA...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGTGACTGGGGTTGCGTaGTTTCAGCTGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQVTGVA*FQLVCL
Trigger: GAGGCAAACCAGCTGAAACCACGCAACCCCAGTCAC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGTGCATTGGGGTGACTaGGGTTGCGTGGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQVHWGD*GCVVSA
Trigger: AGCTGAAACCACGCAACCCCAGTCACCCCAATGCAC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR TCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGCTGGAACAGCTTCATaGGCAGACTGTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHAGTAS*ADCTGT
Trigger: GGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGC...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGPMCVC*HPDYGP
Trigger: TGGACCATAGTCGGGATGTCAGCAGACACACATGGG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCACCCATGTGTGTCTGCTaGCATCCCGACTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAPMCVC*HPDYGP
Trigger: TGGACCATAGTCGGGATGTCAGCAGACACACATGGG...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGTGTCTCCAATCTGCATaGTCTCCAGGTACTGAGACA +
Preference number: 4 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRCLQSA*SPGTET
Trigger: TGTCTCAGTACCTGGAGAGCATGCAGATTGGAGACA...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGGTAAGGACCAGTAAGTaGCAGGCAGGACGTACTCTG +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQVRTSK*QAGRTL
Trigger: CAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTAC...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGTACATCAGAAATAAATaGTGGAGCCGGGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWYIRNK*WSRAQW
Trigger: CCACTGCGCCCGGCTCCAGCATTTATTTCTGATGTA...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGGCCCCACACCCACCTTaGCTCATCACCTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMAPHPP*LITSVI
Trigger: AATTACAGAGGTGATGAGGCAAGGTGGGTGTGGGGC...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCCTTGTCATCATCGCTaGAGATGGGTGTATAGGGCC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAPCHHR*RWVYRA
Trigger: GGCCCTATACACCCATCTCCAGCGATGATGACAAGG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCCTTGTCATCATCGCTaGAGATGGGTGTATAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQPCHHR*RWVYRA
Trigger: GGCCCTATACACCCATCTCCAGCGATGATGACAAGG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACATGTCCTTCTCGGTCTaGTTGGCAAAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHMSFSV*LAKSRW
Trigger: CCACCTGCTCTTTGCCAACCAGACCGAGAAGGACAT...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGACTGACATCCCGACTATaGTCCACGGCCGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGLTSRL*STAGNG
Trigger: ACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAG...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGGGCTGCCTCAGTGTTTaGATGGGCTGGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMGCLSV*MGWKEM
Trigger: CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCC...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGAATACAAAAACTAGCTaGGTGTGGTGGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALNTKTS*VWWWAL
Trigger: AAGTGCCCACCACCACACCCAGCTAGTTTTTGTATT...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGATCAGAAATAAATGCTaGAGCCGGGCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMIRNKC*SRAQWL
Trigger: GAGCCACTGCGCCCGGCTCCAGCATTTATTTCTGAT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCATCAGAAATAAATGCTaGAGCCGGGCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAIRNKC*SRAQWL
Trigger: GAGCCACTGCGCCCGGCTCCAGCATTTATTTCTGAT...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR TCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGCTGGAACAGCTTCATaGGCAGACTGTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVAGTAS*ADCTGT
Trigger: GGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGGCTGGAACAGCTTCATaGGCAGACTGTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGAGTAS*ADCTGT
Trigger: GGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGC...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGCGTGTACCAGAGCTTaGAGCGTGCAGAATGTTTGT +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAACTRA*SVQNVC
Trigger: ACAAACATTCTGCACGCTTCAAGCTCTGGTACACGC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCAACGTCGAGGTCACTaGTATGTCCCTCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHQRRGH*YVPQTR
Trigger: TCTTGTCTGAGGGACATATCAGTGACCTCGACGTTG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCAACGTCGAGGTCACTaGTATGTCCCTCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQQRRGH*YVPQTR
Trigger: TCTTGTCTGAGGGACATATCAGTGACCTCGACGTTG...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTGCCCCAAATGTCCTTaGTCTGCATGCATCCAACCA +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQCPKCP*SACIQP
Trigger: TGGTTGGATGCATGCAGAGCAAGGACATTTGGGGCA...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS-3UTR GCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGTGTCTCCAATCTGCATaGTCTCCAGGTACTGAGACA +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWCLQSA*SPGTET
Trigger: TGTCTCAGTACCTGGAGAGCATGCAGATTGGAGACA...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCCAGAGCTTGAAGCGTaGAGAATGTTTGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWPELEA*RMFVPE
Trigger: CTCAGGAACAAACATTCTGCACGCTTCAAGCTCTGG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCCAGAGCTTGAAGCGTaGAGAATGTTTGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWPELEA*RMFVPE
Trigger: CTCAGGAACAAACATTCTGCACGCTTCAAGCTCTGG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTAAGGACCAGTAAGTaGCAGGCAGGACGTACTCTG +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAVRTSK*QAGRTL
Trigger: CAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTAC...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGGTAAGGACCAGTAAGTaGCAGGCAGGACGTACTCTG +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGVRTSK*QAGRTL
Trigger: CAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTAC...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGTCAGACAAGAGGCACTaGTCAGAATCCCCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVSDKRH*SESPCA
Trigger: AGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGA...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCATCAGACAAGAGGCACTaGTCAGAATCCCCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHASDKRH*SESPCA
Trigger: AGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGA...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGTACATCAGAAATAAATaGTGGAGCCGGGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMYIRNK*WSRAQW
Trigger: CCACTGCGCCCGGCTCCAGCATTTATTTCTGATGTA...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGATGGGGTGACTGGGGTTaGGTGGTTTCAGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGWGDWG*VVSAGL
Trigger: CAAACCAGCTGAAACCACGCAACCCCAGTCACCCCA...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGGCCCCACACCCACCTTaGCTCATCACCTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGAPHPP*LITSVI
Trigger: AATTACAGAGGTGATGAGGCAAGGTGGGTGTGGGGC...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGCCTTGTCATCATCGCTaGAGATGGGTGTATAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVPCHHR*RWVYRA
Trigger: GGCCCTATACACCCATCTCCAGCGATGATGACAAGG...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAGGCCCCGGAACTCAATaGTGTCTCCAATCTGCATGC +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGGPGTQ*CLQSAC
Trigger: GCATGCAGATTGGAGACACCATTGAGTTCCGGGGCC...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACTTGGCAAAGAGCAGGTaGCACACAGTGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHLAKSR*HTVWSS
Trigger: TGATGACCACACTGTGTGCCACCTGCTCTTTGCCAA...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTTGGCAAAGAGCAGGTaGCACACAGTGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQLAKSR*HTVWSS
Trigger: TGATGACCACACTGTGTGCCACCTGCTCTTTGCCAA...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAATGTCCTTCTCGGTCTaGTTGGCAAAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLMSFSV*LAKSRW
Trigger: CCACCTGCTCTTTGCCAACCAGACCGAGAAGGACAT...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGATGTCCTTCTCGGTCTaGTTGGCAAAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGMSFSV*LAKSRW
Trigger: CCACCTGCTCTTTGCCAACCAGACCGAGAAGGACAT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGATGTCCTTCTCGGTCTaGTTGGCAAAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVMSFSV*LAKSRW
Trigger: CCACCTGCTCTTTGCCAACCAGACCGAGAAGGACAT...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCCCAAGAGGGCTTTCTaGTGTCAATGTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAPKRAF*CQCLMQ
Trigger: CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCCCAAGAGGGCTTTCTaGTGTCAATGTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMPKRAF*CQCLMQ
Trigger: CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCAGCTGGTTTGCCTCTaGGGGTTGGGAATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWQLVCL*GLGIFL
Trigger: AAGAAAAATTCCCAACCCCCAGAGGCAAACCAGCTG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCAGCTGGTTTGCCTCTaGGGGTTGGGAATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWQLVCL*GLGIFL
Trigger: AAGAAAAATTCCCAACCCCCAGAGGCAAACCAGCTG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR TCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGCGTGTACCAGAGCTTaGAGCGTGCAGAATGTTTGT +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVACTRA*SVQNVC
Trigger: ACAAACATTCTGCACGCTTCAAGCTCTGGTACACGC...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR TCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCAACGTCGAGGTCACTaGTATGTCCCTCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGQRRGH*YVPQTR
Trigger: TCTTGTCTGAGGGACATATCAGTGACCTCGACGTTG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGTGTCCTTGCTCTGCATaGATCCAACCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGCPCSA*IQPANS
Trigger: GGAGTTTGCTGGTTGGATGCATGCAGAGCAAGGACA...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS-3UTR GCA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACTGTCTCCAATCTGCATaGTCTCCAGGTACTGAGACA +
Preference number: 4 (lower is better)
Translates to: PAALGCPCVSADIPTMVHCLQSA*SPGTET
Trigger: TGTCTCAGTACCTGGAGAGCATGCAGATTGGAGACA...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCCAGAGCTTGAAGCGTaGAGAATGTTTGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMPELEA*RMFVPE
Trigger: CTCAGGAACAAACATTCTGCACGCTTCAAGCTCTGG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGATCAGACAAGAGGCACTaGTCAGAATCCCCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGSDKRH*SESPCA
Trigger: AGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGA...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGTGGTTTCAGCTGGTTTaGCTCTGGGGGTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGWFQLV*LWGLGI
Trigger: AATTCCCAACCCCCAGAGGCAAACCAGCTGAAACCA...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGTTTTGTCAGGTCGGATaGCGAACTTCCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVFCQVG*RTSLCP
Trigger: AGGGCAAAGGGAAGTTCGCCATCCGACCTGACAAAA...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCATTTTGTCAGGTCGGATaGCGAACTTCCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAFCQVG*RTSLCP
Trigger: AGGGCAAAGGGAAGTTCGCCATCCGACCTGACAAAA...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCATTGGCAAAGAGCAGGTaGCACACAGTGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHALAKSR*HTVWSS
Trigger: TGATGACCACACTGTGTGCCACCTGCTCTTTGCCAA...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp GGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGAGTGTTTGGATGGGCTaGAAGGAAATGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GVGSSAPKRAFWCQCLMQSVWMG*KEMLRF
Trigger: GAACCTCAGCATTTCCTTCCAGCCCATCCAAACACT...CTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAGGCTGCCTCAGTGTTTaGATGGGCTGGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGGCLSV*MGWKEM
Trigger: CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCC...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGAATACAAAAACTAGCTaGGTGTGGTGGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: CPCVSADIPTMVHGREWWNTKTS*VWWWAL
Trigger: AAGTGCCCACCACCACACCCAGCTAGTTTTTGTATT...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGTTTATTCCACAAGCTaGTTCCAACGGCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHAVYSTS*FQRQGL
Trigger: AAGGCCCTGCCGTTGGAACCAGCTTGTGGAATAAAC...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAGTTTATTCCACAAGCTaGTTCCAACGGCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLVYSTS*FQRQGL
Trigger: AAGGCCCTGCCGTTGGAACCAGCTTGTGGAATAAAC...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR GCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGTGTCTCCAATCTGCATaGTCTCCAGGTACTGAGACA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGCLQSA*SPGTET
Trigger: TGTCTCAGTACCTGGAGAGCATGCAGATTGGAGACA...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR GCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGATGGTTTCAGCTGGTTTaGCTCTGGGGGTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGWFQLV*LWGLGI
Trigger: AATTCCCAACCCCCAGAGGCAAACCAGCTGAAACCA...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAGTGTTTGGATGGGCTaGAAGGAAATGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGSVWMG*KEMLRF
Trigger: GAACCTCAGCATTTCCTTCCAGCCCATCCAAACACT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGAAATACATGTGGTTGTaGGAGTTCTGCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMKYMWL*EFCHQG
Trigger: TCCCTGATGGCAGAACTCCCACAACCACATGTATTT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAAAACTAGCTGGGTGTaGTGGTGGGCACTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGKTSWV*WWALLV
Trigger: GACTAAAAGTGCCCACCACCACACCCAGCTAGTTTT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CCA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAAACCACAGTTCAGGATaGCAGACCAAGCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: WGREQCPQEGFLVSMSHANHSSG*QTKLQC
Trigger: ACATTGGAGCTTGGTCTGCCATCCTGAACTGTGGTT...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAAGTGTTTGGATGGGCTaGAAGGAAATGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGSVWMG*KEMLRF
Trigger: GAACCTCAGCATTTCCTTCCAGCCCATCCAAACACT...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAAATACATGTGGTTGTaGGAGTTCTGCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGKYMWL*EFCHQG
Trigger: TCCCTGATGGCAGAACTCCCACAACCACATGTATTT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp AGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGAAATACATGTGGTTGTaGGAGTTCTGCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSAPKRAFWCQCLMQRQVKYMWL*EFCHQG
Trigger: TCCCTGATGGCAGAACTCCCACAACCACATGTATTT...CACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CCA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAAAATACATGTGGTTGTaGGAGTTCTGCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGKYMWL*EFCHQG
Trigger: TCCCTGATGGCAGAACTCCCACAACCACATGTATTT...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS TCA 90 bp CGCCGGGTGTCATGGCTGATGATCTGGAGAGAGGCCCAAAGCTGCTaGACGGTCCCCAGGGCAGAGGCCTCCCAGGGCGGCTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RRVSWLMIWREAQSC*TVPRAEASQGGSQA
Trigger: GGCCTGGGAGCCGCCCTGGGAGGCCTCTGCCCTGGGGACCGTTCAGCAGCTTTGGGCCTCTCTCCAGATCATCAGCCATGACACCCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 90 bp GCCCACGTGGTCCAGGTTGGGAAGGCAGGCGTACTGGATCATGGGTaGGGGGCCACACATCAGCACCAGCGGCTCCTCCTCTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AHVVQVGKAGVLDHG*GATHQHQRLLLWGW
Trigger: CCACCCCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS CCA 90 bp GTGACCGTGCCCGGCCCTCAGAAGACGAAGCAGCGCTCCGTGGGGTaGCCCACGTGGTCCAGGTTGGGAAGGCAGGCGTACTGGATCATG +
Preference number: 5 (lower is better)
Translates to: VTVPGPQKTKQRSVG*PTWSRLGRQAYWIM
Trigger: CATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS-3UTR CAA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCCCACGTGGTCCAGGTaGGGAAGGCAGGCGTACTGG +
Preference number: 5 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALPTWSR*GRQAYW
Trigger: CCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTCCAACGGCAGGGCCTTaGCGTCTGCTGTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: ADIPTMVHGREWWADGAAPTAGP*RLLFPP
Trigger: TGGTGGAAACAGCAGACGCAAAGGCCCTGCCGTTGG...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS GCA 90 bp AGGGCTGGATGGGCAAACTGGGGCAGAGCTAGACAAGGCTGCACGTaGCCAGGCCTGCATCCCAAGAGAGGGGCTGCAGAAGCCACTGCA +
Preference number: 5 (lower is better)
Translates to: RAGWANWGRARQGCT*PGLHPKRGAAEATA
Trigger: TGCAGTGGCTTCTGCAGCCCCTCTCTTGGGATGCAGGCCTGGGCACGTGCAGCCTTGTCTAGCTCTGCCCCAGTTTGCCCATCCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 90 bp GCGTGTGAGGTGCTGAGGCCAGGCGCACGCTGGGTGTGTCTGTCCTaGTGGCCTAGAGGGGCCACAAACAAGGTGGCCAGAACAGGGAAT +
Preference number: 5 (lower is better)
Translates to: ACEVLRPGARWVCLS*WPRGATNKVARTGN
Trigger: ATTCCCTGTTCTGGCCACCTTGTTTGTGGCCCCTCTAGGCCAGCAGGACAGACACACCCAGCGTGCGCCTGGCCTCAGCACCTCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 90 bp CCCAACTGTCAGCCTGTCAGGGTCGCTGAGCACTCACAGCCGGGCTaGGAGGCAGGGGAACCACAGTTCAGGATGGCAGACCAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PNCQPVRVAEHSQPG*EAGEPQFRMADQAP
Trigger: TGGAGCTTGGTCTGCCATCCTGAACTGTGGTTCCCCTGCCTCCCAGCCCGGCTGTGAGTGCTCAGCGACCCTGACAGGCTGACAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438270.1
CDS CCA 90 bp ACACACATGCACGCTGCGTGTGAGGTGCTGAGGCCAGGCGCACGCTaGGTGTGTCTGTCCTGCTGGCCTAGAGGGGCCACAAACAAGGTG +
Preference number: 5 (lower is better)
Translates to: THMHAACEVLRPGAR*VCLSCWPRGATNKV
Trigger: CACCTTGTTTGTGGCCCCTCTAGGCCAGCAGGACAGACACACCCAGCGTGCGCCTGGCCTCAGCACCTCACACGCAGCGTGCATGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS-3UTR CAA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCCCACGTGGTCCAGGTaGGGAAGGCAGGCGTACTGG +
Preference number: 5 (lower is better)
Translates to: CPCVSADIPTMVHGREWWPTWSR*GRQAYW
Trigger: CCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGCTGGCACCTGCAGCTTaGGGCTGCCCATGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALLAPAA*GCPCVS
Trigger: AGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAG...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS GCA 90 bp AACTTGAGGGCTGGATGGGCAAACTGGGGCAGAGCTAGACAAGGCTaGACGTGCCCAGGCCTGCATCCCAAGAGAGGGGCTGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: NLRAGWANWGRARQG*TCPGLHPKRGAAEA
Trigger: GGCTTCTGCAGCCCCTCTCTTGGGATGCAGGCCTGGGCACGTGCAGCCTTGTCTAGCTCTGCCCCAGTTTGCCCATCCAGCCCTCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 90 bp TGTACCTGTCAGCCTGTCAGGGTCGCTGAGCACTCACAGCCGGGCTaGGAGGCAGGGGAACCACAGTTCAGGATGGCAGACCAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: CTCQPVRVAEHSQPG*EAGEPQFRMADQAP
Trigger: TGGAGCTTGGTCTGCCATCCTGAACTGTGGTTCCCCTGCCTCCCAGCCCGGCTGTGAGTGCTCAGCGACCCTGACAGGCTGACAGGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS CCA 90 bp CTGCCTCCATGCCTTCACTCCTGCTGGTGCCACTGCCAGGGACTCTaGGCCTTCCCACTCTCATTCCAACAGACTCGCCCTCAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: LPPCLHSCWCHCQGL*AFPLSFQQTRPQRP
Trigger: GGGCCTTTGAGGGCGAGTCTGTTGGAATGAGAGTGGGAAGGCCCAGAGTCCCTGGCAGTGGCACCAGCAGGAGTGAAGGCATGGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466276.1
ENST00000470741.1
CDS CCA 90 bp CCGAGAGGTAGATGTGCTGGCCTGCAGGACAGAACGGGGTCACTCTaGGCCAGAGATCATCCTGCGGGTGACCCCTGGGTCTTGTCAACC +
Preference number: 5 (lower is better)
Translates to: PRGRCAGLQDRTGSL*ARDHPAGDPWVLST
Trigger: GGTTGACAAGACCCAGGGGTCACCCGCAGGATGATCTCTGGCCCAGAGTGACCCCGTTCTGTCCTGCAGGCCAGCACATCTACCTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS-3UTR CAA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTAGGTCCACGAAGCCCTaGTCATCATCGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: ADIPTMVHGREWWADGAARSTKP*SSSLEM
Trigger: CATCTCCAGCGATGATGACAAGGGCTTCGTGGACCT...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCCCACGTGGTCCAGGTaGGGAAGGCAGGCGTACTGG +
Preference number: 5 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMPTWSR*GRQAYW
Trigger: CCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCCCACGTGGTCCAGGTaGGGAAGGCAGGCGTACTGG +
Preference number: 5 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAPTWSR*GRQAYW
Trigger: CCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTTGCTGTTTCCACCATTaGAACACCCACCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: ADIPTMVHGREWWADGAACCFHH*NTHPPQ
Trigger: CTGGGGTGGGTGGGTGTTCAAATGGTGGAAACAGCA...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS GCA 90 bp CCCGTCCCTACACGTGTGAGCAGAGGCAAATCGCAGGAAAGACGGTaGAAACGCCACTCAGGATCAGGTGTGCAGGGGGCCCACCAACCT +
Preference number: 5 (lower is better)
Translates to: PVPTRVSRGKSQERR*KRHSGSGVQGAHQP
Trigger: AGGTTGGTGGGCCCCCTGCACACCTGATCCTGAGTGGCGTTTGCACCGTCTTTCCTGCGATTTGCCTCTGCTCACACGTGTAGGGACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 90 bp TCCCCAGTACCCAGCATGGCCAGGAGAGGGAGTGTGAAGAAGCCATaGGGAAGGTCGGCGCTGCAGAGGCGCTTACATCCAAACGTGGCA +
Preference number: 5 (lower is better)
Translates to: SPVPSMARRGSVKKP*GRSALQRRLHPNVA
Trigger: TGCCACGTTTGGATGTAAGCGCCTCTGCAGCGCCGACCTTCCGCATGGCTTCTTCACACTCCCTCTCCTGGCCATGCTGGGTACTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 90 bp TGCCTGCTTGTCCTTGTAAGACGTGACGCCGACGCCAAGCACAGATaGACACACATGCACGCTGCGTGTGAGGTGCTGAGGCCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: CLLVLVRRDADAKHR*THMHAACEVLRPGA
Trigger: TGCGCCTGGCCTCAGCACCTCACACGCAGCGTGCATGTGTGTGCATCTGTGCTTGGCGTCGGCGTCACGTCTTACAAGGACAAGCAGGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 90 bp GAGCCGCAGCGGGTACTTGATGTCCGGGCTCTCGAGGGTGATGGCTaGCGTGGAGCGCTGGAACAGCTTCATGAGCAGACTGTACAGGAA +
Preference number: 5 (lower is better)
Translates to: EPQRVLDVRALEGDG*RGALEQLHEQTVQE
Trigger: TTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGCGCTCCACGCCAGCCATCACCCTCGAGAGCCCGGACATCAAGTACCCGCTGCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000466276.1
CDS CCA 90 bp GCTGGGTGTGTCTGTCCTGCTGGCCTAGAGGGGCCACAAACAAGGTaGCCAGAACAGGGAATGAACCCAGGGTCCCAAAGGGAGGATGCC +
Preference number: 5 (lower is better)
Translates to: AGCVCPAGLEGPQTR*PEQGMNPGSQREDA
Trigger: GGCATCCTCCCTTTGGGACCCTGGGTTCATTCCCTGTTCTGGCCACCTTGTTTGTGGCCCCTCTAGGCCAGCAGGACAGACACACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS-3UTR CAA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGAGCCCCACACCCACCTaGCCTCATCACCTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALSPTPT*PHHLCN
Trigger: ATTACAGAGGTGATGAGGCAAGGTGGGTGTGGGGCT...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCCCAAATCCATCTCCTaGGGGCCTTCCTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMPKSIS*GPSCCP
Trigger: GGGGCAGCAGGAAGGCCCCAAGGAGATGGATTTGGG...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGCCAACGGCAGGGCCTTaGCGTCTGCTGTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: CPCVSADIPTMVHGREWWPTAGP*RLLFPP
Trigger: TGGTGGAAACAGCAGACGCAAAGGCCCTGCCGTTGG...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS CCA 90 bp GTCGGATGGCGAACTTCCCTTTGCCCTGGTAGACCAGCAGCCCACTaGGGCCCCGGAACTCAATGGTGTCTCCAATCTGCATGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: VGWRTSLCPGRPAAH*GPGTQWCLQSACSP
Trigger: TGGAGAGCATGCAGATTGGAGACACCATTGAGTTCCGGGGCCCCAGTGGGCTGCTGGTCTACCAGGGCAAAGGGAAGTTCGCCATCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000470741.1
CDS-3UTR CAA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCCTCCAGCGGGAAACTaGGGATGGGTGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWPPAGN*GWVSLK
Trigger: CTTCAAGGACACCCATCCCAAGTTTCCCGCTGGAGG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTATAGGGTTGGACTTTTaGTCAGGTCGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: ADIPTMVHGREWWADGAAIGLDF*SGRMAN
Trigger: GTTCGCCATCCGACCTGACAAAAAGTCCAACCCTAT...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp TGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGTCCTTCTCGGTCTGGTaGGCAAAGAGCAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: CPCVSADIPTMVHGREWWSFSVW*AKSRWH
Trigger: GTGCCACCTGCTCTTTGCCAACCAGACCGAGAAGGA...CCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp GCTGACATCCCGACTATGGTCCACGGCCGGGAATGGTGGGCAGACGGGGCTGCTAGCGTGTACCAGAGCTaGAAGCGTGCAGAATGTTTG +
Preference number: 5 (lower is better)
Translates to: ADIPTMVHGREWWADGAASVYQS*KRAECL
Trigger: CAAACATTCTGCACGCTTCAAGCTCTGGTACACGCT...AGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACCTGGCACCTGCAGCTTaGGGCTGCCCATGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: PAALGCPCVSADIPTMVHLAPAA*GCPCVS
Trigger: AGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAG...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCCTGGCACCTGCAGCTTaGGGCTGCCCATGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: PQEGFLVSMSHAASGGEALAPAA*GCPCVS
Trigger: AGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAG...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCACCCCACCCCTTGTGTaGCAGGTCACAGACCCTCGA +
Preference number: 5 (lower is better)
Translates to: PQEGFLVSMSHAASGGEATPPLV*QVTDPR
Trigger: TCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCCCAAATCCATCTCCTaGGGGCCTTCCTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGPKSIS*GPSCCP
Trigger: GGGGCAGCAGGAAGGCCCCAAGGAGATGGATTTGGG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS GCA 90 bp AAGGTGGCCAGAACAGGGAATGAACCCAGGGTCCCAAAGGGAGGATaGCAGACAGGACGGGGAGGGAGGAATCCATCTCTGCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: KVARTGNEPRVPKGG*QTGRGGRNPSLPSA
Trigger: AGCTGATGGCAGAGATGGATTCCTCCCTCCCCGTCCTGTCTGGCATCCTCCCTTTGGGACCCTGGGTTCATTCCCTGTTCTGGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS-3UTR CAA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGCTGCCCCAAATGTCCTaGCTCTGCATGCATCCAACC +
Preference number: 5 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWLPQMS*LCMHPT
Trigger: GGTTGGATGCATGCAGAGCAAGGACATTTGGGGCAG...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS-3UTR CAA 90 bp CAGGCAGGACGTACTCTGAAGGCTCAGCCGTGGCCCATCTGGGACACAGCCCTGATAGGGTTGGACTTTTaGTCAGGTCGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: QAGRTLKAQPWPIWDTALIGLDF*SGRMAN
Trigger: GTTCGCCATCCGACCTGACAAAAAGTCCAACCCTAT...CAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGTCCTTCTCGGTCTGGTaGGCAAAGAGCAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMSFSVW*AKSRWH
Trigger: GTGCCACCTGCTCTTTGCCAACCAGACCGAGAAGGA...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CCTGCAGCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACTCCTTCTCGGTCTGGTaGGCAAAGAGCAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PAALGCPCVSADIPTMVHSFSVW*AKSRWH
Trigger: GTGCCACCTGCTCTTTGCCAACCAGACCGAGAAGGA...GTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGCTGGCACCTGCAGCTTaGGGCTGCCCATGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGLAPAA*GCPCVS
Trigger: AGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAG...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS TCA 90 bp ACATCACAGATGCCCATCTCGGCTCAGTACGAGAACTCTCCGACCTaGGCAGTGTTCCAGCACAGAGCAGCTGCCTCAAGGAGAGACCCG +
Preference number: 5 (lower is better)
Translates to: TSQMPISAQYENSPT*AVFQHRAAASRRDP
Trigger: CGGGTCTCTCCTTGAGGCAGCTGCTCTGTGCTGGAACACTGCTCAGGTCGGAGAGTTCTCGTACTGAGCCGAGATGGGCATCTGTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 90 bp TACTTGATGTCCGGGCTCTCGAGGGTGATGGCTGGCGTGGAGCGCTaGAACAGCTTCATGAGCAGACTGTACAGGAACCAGACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: YLMSGLSRVMAGVER*NSFMSRLYRNQTGK
Trigger: CTTCCCAGTCTGGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGCGCTCCACGCCAGCCATCACCCTCGAGAGCCCGGACATCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000466276.1
CDS CCA 90 bp GGAGCGCTGGAACAGCTTCATGAGCAGACTGTACAGGAACCAGACTaGGAAGAGCACCATATGGCCCAACTGAAACGACAGGACCCGCGG +
Preference number: 5 (lower is better)
Translates to: GALEQLHEQTVQEPD*EEHHMAQLKRQDPR
Trigger: CCGCGGGTCCTGTCGTTTCAGTTGGGCCATATGGTGCTCTTCCCAGTCTGGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407332.5
CDS CCA 90 bp ACCACAGTTCAGGATGGCAGACCAAGCTCCAATGTTTTCCCAGTGTaGCTGGCAGACTCCAGGGCCAACCCCTGGCCTGGATCCCACAAA +
Preference number: 5 (lower is better)
Translates to: TTVQDGRPSSNVFPV*LADSRANPWPGSHK
Trigger: TTTGTGGGATCCAGGCCAGGGGTTGGCCCTGGAGTCTGCCAGCCACACTGGGAAAACATTGGAGCTTGGTCTGCCATCCTGAACTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438270.1
CDS CCA 90 bp GGAGCGCTGGAACAGCTTCATGAGCAGACTGTACAGGAACCAGACTaGGAAGAGCACCATATGGCCCAACTGTCAGCCTGTCAGGGTCGC +
Preference number: 5 (lower is better)
Translates to: GALEQLHEQTVQEPD*EEHHMAQLSACQGR
Trigger: GCGACCCTGACAGGCTGACAGTTGGGCCATATGGTGCTCTTCCCAGTCTGGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438270.1
CDS-3UTR CAA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGATAGGGTTGGACTTTTaGTCAGGTCGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRIGLDF*SGRMAN
Trigger: GTTCGCCATCCGACCTGACAAAAAGTCCAACCCTAT...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCATCCTTCTCGGTCTGGTaGGCAAAGAGCAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: WGREQCPQEGFLVSMSHASFSVW*AKSRWH
Trigger: GTGCCACCTGCTCTTTGCCAACCAGACCGAGAAGGA...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp GCTTTGGGCTGCCCATGTGTGTCTGCTGACATCCCGACTATGGTCCACGGCCGGAGCGTGTACCAGAGCTaGAAGCGTGCAGAATGTTTG +
Preference number: 5 (lower is better)
Translates to: ALGCPCVSADIPTMVHGRSVYQS*KRAECL
Trigger: CAAACATTCTGCACGCTTCAAGCTCTGGTACACGCT...CCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAACCCCACCCCTTGTGTaGCAGGTCACAGACCCTCGA +
Preference number: 5 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGTPPLV*QVTDPR
Trigger: TCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp CCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCGTGGTTTCAGCTGGTTaGCCTCTGGGGGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: PQEGFLVSMSHAASGGEAVVSAG*PLGVGN
Trigger: ATTCCCAACCCCCAGAGGCAAACCAGCTGAAACCAC...GGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp ACCCCACCCCTTGTGTTGCAGGTCACAGACCCTCGAGGAGCTAGAGAAGGGTTAAGGTCCACGAAGCCCTaGTCATCATCGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: TPPLVLQVTDPRGAREGLRSTKP*SSSLEM
Trigger: CATCTCCAGCGATGATGACAAGGGCTTCGTGGACCT...TAACCCTTCTCTAGCTCCTCGAGGGTCTGTGACCTGCAACACAAGGGGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGAAGCGTGCAGAATGTTaGTTCCTGAGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWKRAEC*FLSSSS
Trigger: GCTGGAGGAACTCAGGAACAAACATTCTGCACGCTT...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp ACCCCAGCATGGCCAGCTCTCTCTTCCCGTCCCAGCCCAAATCCATCTCCTTGGAGCGTGTACCAGAGCTaGAAGCGTGCAGAATGTTTG +
Preference number: 5 (lower is better)
Translates to: TPAWPALSSRPSPNPSPWSVYQS*KRAECL
Trigger: CAAACATTCTGCACGCTTCAAGCTCTGGTACACGCT...CCAAGGAGATGGATTTGGGCTGGGACGGGAAGAGAGAGCTGGCCATGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAGCCCCACACCCACCTaGCCTCATCACCTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGSPTPT*PHHLCN
Trigger: ATTACAGAGGTGATGAGGCAAGGTGGGTGTGGGGCT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS-3UTR CAA 90 bp TGGGGTAGGGAGCAGTGCCCCCAAGAGGGCTTTCTGGTGTCAATGTCTCATGCATGCTGTTTCCACCATTaGAACACCCACCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: WGREQCPQEGFLVSMSHACCFHH*NTHPPQ
Trigger: CTGGGGTGGGTGGGTGTTCAAATGGTGGAAACAGCA...TGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352397.10
ENST00000361740.8
CDS CCA 90 bp GGAGCGCTGGAACAGCTTCATGAGCAGACTGTACAGGAACCAGACTaGGAAGAGCACCATATGGCCCAACTCCCAGCTCTCTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GALEQLHEQTVQEPD*EEHHMAQLPALCSF
Trigger: GAAAGAGCAGAGAGCTGGGAGTTGGGCCATATGGTGCTCTTCCCAGTCTGGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS-3UTR CAA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAAGGTCCACGAAGCCCTaGTCATCATCGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGRSTKP*SSSLEM
Trigger: CATCTCCAGCGATGATGACAAGGGCTTCGTGGACCT...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGATAGGGTTGGACTTTTaGTCAGGTCGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMIGLDF*SGRMAN
Trigger: GTTCGCCATCCGACCTGACAAAAAGTCCAACCCTAT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CAGCTCGGGGTTCCCCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGAAGCGTGCAGAATGTTaGTTCCTGAGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QLGVPQGCLSVWMGWKEMKRAEC*FLSSSS
Trigger: GCTGGAGGAACTCAGGAACAAACATTCTGCACGCTT...CATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS CCA 90 bp CTGCAGAGGCGCTTACATCCAAACGTGGCAAAGTCCACATGTGGATaGTGTCATCACTTAGAGGGGGACAACAGACCTCTCCAACAGGGC +
Preference number: 5 (lower is better)
Translates to: LQRRLHPNVAKSTCG*CHHLEGDNRPLQQG
Trigger: GCCCTGTTGGAGAGGTCTGTTGTCCCCCTCTAAGTGATGACACCATCCACATGTGGACTTTGCCACGTTTGGATGTAAGCGCCTCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 90 bp GGCGCTGCAGAGGCGCTTACATCCAAACGTGGCAAAGTCCACATGTaGATGGTGTCATCACTTAGAGGGGGACAACAGACCTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: GAAEALTSKRGKVHM*MVSSLRGGQQTSPT
Trigger: TGTTGGAGAGGTCTGTTGTCCCCCTCTAAGTGATGACACCATCCACATGTGGACTTTGCCACGTTTGGATGTAAGCGCCTCTGCAGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS-3UTR CAA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAAGCGTGCAGAATGTTaGTTCCTGAGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGKRAEC*FLSSSS
Trigger: GCTGGAGGAACTCAGGAACAAACATTCTGCACGCTT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp AAGAGGGCTTTCTGGTGTCAATGTCTCATGCAGCGTCAGGTGGTGAGGCCTGGGAGCGTGTACCAGAGCTaGAAGCGTGCAGAATGTTTG +
Preference number: 5 (lower is better)
Translates to: KRAFWCQCLMQRQVVRPGSVYQS*KRAECL
Trigger: CAAACATTCTGCACGCTTCAAGCTCTGGTACACGCT...CCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS-3UTR CAA 90 bp CCAAGGCTGCCTCAGTGTTTGGATGGGCTGGAAGGAAATGCTGAGGTTCTGGGAAAGCGTGCAGAATGTTaGTTCCTGAGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PRLPQCLDGLEGNAEVLGKRAEC*FLSSSS
Trigger: GCTGGAGGAACTCAGGAACAAACATTCTGCACGCTT...TCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000407332.5
ENST00000407623.7
CDS GCA 90 bp GAACCAGACTGGGAAGAGCACCATATGGCCCAACTCCCAGCTCTCTaGTCTTTCAACATCAAGCCCATCTTGCTTCAGGCGTTCGCATAT +
Preference number: 5 (lower is better)
Translates to: EPDWEEHHMAQLPAL*SFNIKPILLQAFAY
Trigger: ATATGCGAACGCCTGAAGCAAGATGGGCTTGATGTTGAAAGAGCAGAGAGCTGGGAGTTGGGCCATATGGTGCTCTTCCCAGTCTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS CCA 90 bp AGCTTCTGCATTAGGGGCAAACAGAGCCCCAAGGCCTTCTGGAAGTaGATTCCAGGACTATCAACTGGTCCTAAGGGTCAAGGTCAGACA +
Preference number: 5 (lower is better)
Translates to: SFCIRGKQSPKAFWK*IPGLSTGPKGQGQT
Trigger: TGTCTGACCTTGACCCTTAGGACCAGTTGATAGTCCTGGAATCCACTTCCAGAAGGCCTTGGGGCTCTGTTTGCCCCTAATGCAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 90 bp ACCAGAAGCTTCTGCATTAGGGGCAAACAGAGCCCCAAGGCCTTCTaGAAGTGGATTCCAGGACTATCAACTGGTCCTAAGGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: TRSFCIRGKQSPKAF*KWIPGLSTGPKGQG
Trigger: ACCTTGACCCTTAGGACCAGTTGATAGTCCTGGAATCCACTTCCAGAAGGCCTTGGGGCTCTGTTTGCCCCTAATGCAGAAGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS TCA 72 bp CAGCCTGCCGGGCTCCGAATGGGCCCAGCAGGGGCGTaGCTCACCGACAGGGAGGCCCAGGATGTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: QPAGLRMGPAGA*LTDREAQDVLG
Trigger: CCCCAGCACATCCTGGGCCTCCCTGTCGGTGAGTCACGCCCCTGCTGGGCCCATTCGGAGCCCGGCAGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466276.1
ENST00000470741.1
CDS TCA 72 bp GTCCCCTGCCTGCCCGCCAGCGGTCCTGCCAGAATCTaGGCGGCACCTCCCTCCTGGTCCTGTCAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: VPCLPASGPARI*AAPPSWSCQPV
Trigger: GACAGGCTGACAGGACCAGGAGGGAGGTGCCGCTCAGATTCTGGCAGGACCGCTGGCGGGCAGGCAGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402438.5
CDS CCA 72 bp CCCGGCCCTCAGAAGACGAAGCAGCGCTCCGTGGGGTaGCCCACGTGGTCCAGGTTGGGAAGGCAGGCGTAC +
Preference number: 6 (lower is better)
Translates to: PGPQKTKQRSVG*PTWSRLGRQAY
Trigger: GTACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS TCA 72 bp GTCCCCTGCCTGCCCGCCAGCGGTCCTGCCAGAATCTaGGCGGCACCTCCCTCCTGGTCCTGTTCTAACCGG +
Preference number: 6 (lower is better)
Translates to: VPCLPASGPARI*AAPPSWSCSNR
Trigger: CCGGTTAGAACAGGACCAGGAGGGAGGTGCCGCTCAGATTCTGGCAGGACCGCTGGCGGGCAGGCAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407623.7
CDS TCA 72 bp GGTCCCCAGTACCCAGCATGGCCAGGAGAGGGAGTGTaGAGAAGCCATGCGGAAGGTCGGCGCTGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: GPQYPAWPGEGV*RSHAEGRRCRG
Trigger: GCCTCTGCAGCGCCGACCTTCCGCATGGCTTCTTCACACTCCCTCTCCTGGCCATGCTGGGTACTGGGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp GGGGCAGAGCTAGACAAGGCTGCACGTGCCCAGGCCTaGATCCCAAGAGAGGGGCTGCAGAAGCCACTGCAC +
Preference number: 6 (lower is better)
Translates to: GAELDKAARAQA*IPREGLQKPLH
Trigger: GTGCAGTGGCTTCTGCAGCCCCTCTCTTGGGATGCAGGCCTGGGCACGTGCAGCCTTGTCTAGCTCTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp GTGCTGAGGCCAGGCGCACGCTGGGTGTGTCTGTCCTaGTGGCCTAGAGGGGCCACAAACAAGGTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: VLRPGARWVCLS*WPRGATNKVAR
Trigger: TCTGGCCACCTTGTTTGTGGCCCCTCTAGGCCAGCAGGACAGACACACCCAGCGTGCGCCTGGCCTCAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp GTCCAGGTTGGGAAGGCAGGCGTACTGGATCATGGGTaGGGGGCCACACATCAGCACCAGCGGCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: VQVGKAGVLDHG*GATHQHQRLLL
Trigger: GAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS CCA 72 bp CAGCCTGTCAGGGTCGCTGAGCACTCACAGCCGGGCTaGGAGGCAGGGGAACCACAGTTCAGGATGGCAGAC +
Preference number: 6 (lower is better)
Translates to: QPVRVAEHSQPG*EAGEPQFRMAD
Trigger: GTCTGCCATCCTGAACTGTGGTTCCCCTGCCTCCCAGCCCGGCTGTGAGTGCTCAGCGACCCTGACAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407623.7
ENST00000438270.1
CDS CCA 72 bp GGAACCAAACCCAGCGTCCTGAGGGTGCACTCCCTGTaGGGTCCCCAGTACCCAGCATGGCCAGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: GTKPSVLRVHSL*GPQYPAWPGEG
Trigger: TCCCTCTCCTGGCCATGCTGGGTACTGGGGACCCCACAGGGAGTGCACCCTCAGGACGCTGGGTTTGGTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CAA 90 bp GTGTCATGGCTGATGATCTCCCGGTCGATGAGCCGCAGCGGGTACTaGATGTCCGGGCTCTCGAGGGTGATGGCTGGCGTGGAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: VSWLMISRSMSRSGY*MSGLSRVMAGVERW
Trigger: CCAGCGCTCCACGCCAGCCATCACCCTCGAGAGCCCGGACATCAAGTACCCGCTGCGGCTCATCGACCGGGAGATCATCAGCCATGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000466276.1
CDS GCA 72 bp GCTGGATGGGCAAACTGGGGCAGAGCTAGACAAGGCTaGACGTGCCCAGGCCTGCATCCCAAGAGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: AGWANWGRARQG*TCPGLHPKRGA
Trigger: AGCCCCTCTCTTGGGATGCAGGCCTGGGCACGTGCAGCCTTGTCTAGCTCTGCCCCAGTTTGCCCATCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp AGATGTGCTGGCCTGCAGGACAGAACGGGGTCACTCTaGGCCAGAGATCATCCTGCGGGTGACCCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RCAGLQDRTGSL*ARDHPAGDPWV
Trigger: GACCCAGGGGTCACCCGCAGGATGATCTCTGGCCCAGAGTGACCCCGTTCTGTCCTGCAGGCCAGCACATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CAA 72 bp CTGATGATCTCCCGGTCGATGAGCCGCAGCGGGTACTaGATGTCCGGGCTCTCGAGGGTGATGGCTGGCGTG +
Preference number: 6 (lower is better)
Translates to: LMISRSMSRSGY*MSGLSRVMAGV
Trigger: CACGCCAGCCATCACCCTCGAGAGCCCGGACATCAAGTACCCGCTGCGGCTCATCGACCGGGAGATCATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000466276.1
CDS GCA 72 bp CCCAGCATGGCCAGGAGAGGGAGTGTGAAGAAGCCATaGGGAAGGTCGGCGCTGCAGAGGCGCTTACATCCA +
Preference number: 6 (lower is better)
Translates to: PSMARRGSVKKP*GRSALQRRLHP
Trigger: TGGATGTAAGCGCCTCTGCAGCGCCGACCTTCCGCATGGCTTCTTCACACTCCCTCTCCTGGCCATGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp TGGGCAAACTGGGGCAGAGCTAGACAAGGCTGCACGTaGCCAGGCCTGCATCCCAAGAGAGGGGCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: WANWGRARQGCT*PGLHPKRGAAE
Trigger: TTCTGCAGCCCCTCTCTTGGGATGCAGGCCTGGGCACGTGCAGCCTTGTCTAGCTCTGCCCCAGTTTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp CAGCCAGGACTGAGGTGGGCTTCACAGGGCAGAAAGTaGGAGCCTTCCCTGCCCAGGAACTCCAAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: QPGLRWASQGRK*EPSLPRNSKSP
Trigger: TGGGCTCTTGGAGTTCCTGGGCAGGGAAGGCTCCCACTTTCTGCCCTGTGAAGCCCACCTCAGTCCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp AGGGGCAGGAAGAACTTGAGGGCTGGATGGGCAAACTaGGGCAGAGCTAGACAAGGCTGCACGTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: RGRKNLRAGWAN*GRARQGCTCPG
Trigger: GCCTGGGCACGTGCAGCCTTGTCTAGCTCTGCCCCAGTTTGCCCATCCAGCCCTCAAGTTCTTCCTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS TCA 72 bp AGGAACCAGACTGGGAAGAGCACCATATGGCCCAACTaGAACGACAGGACCCGCGGGGTCAGTGCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: RNQTGKSTIWPN*NDRTRGVSAGA
Trigger: GGCTCCTGCACTGACCCCGCGGGTCCTGTCGTTTCAGTTGGGCCATATGGTGCTCTTCCCAGTCTGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407332.5
CDS GCA 72 bp CTCTCCGACCTGAGCAGTGTTCCAGCACAGAGCAGCTaGCTCAAGGAGAGACCCGTCCCTACACGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: LSDLSSVPAQSS*LKERPVPTRVS
Trigger: GCTCACACGTGTAGGGACGGGTCTCTCCTTGAGGCAGCTGCTCTGTGCTGGAACACTGCTCAGGTCGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp GATGCCAGACAGGACGGGGAGGGAGGAATCCATCTCTaGCATCAGCTCAAGCAGTGGCCTGAAGGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: DARQDGEGGIHL*HQLKQWPEGAG
Trigger: TCCTGCCCCTTCAGGCCACTGCTTGAGCTGATGGCAGAGATGGATTCCTCCCTCCCCGTCCTGTCTGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp TCCGGGCTCTCGAGGGTGATGGCTGGCGTGGAGCGCTaGAACAGCTTCATGAGCAGACTGTACAGGAACCAG +
Preference number: 6 (lower is better)
Translates to: SGLSRVMAGVER*NSFMSRLYRNQ
Trigger: CTGGTTCCTGTACAGTCTGCTCATGAAGCTGTTCCAGCGCTCCACGCCAGCCATCACCCTCGAGAGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000466276.1
CDS CCA 72 bp CGGGTACTTGATGTCCGGGCTCTCGAGGGTGATGGCTaGCGTGGAGCGCTGGAACAGCTTCATGAGCAGACT +
Preference number: 6 (lower is better)
Translates to: RVLDVRALEGDG*RGALEQLHEQT
Trigger: AGTCTGCTCATGAAGCTGTTCCAGCGCTCCACGCCAGCCATCACCCTCGAGAGCCCGGACATCAAGTACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000466276.1
CDS CCA 72 bp CAGGATGGCAGACCAAGCTCCAATGTTTTCCCAGTGTaGCTGGCAGACTCCAGGGCCAACCCCTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: QDGRPSSNVFPV*LADSRANPWPG
Trigger: TCCAGGCCAGGGGTTGGCCCTGGAGTCTGCCAGCCACACTGGGAAAACATTGGAGCTTGGTCTGCCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438270.1
CDS GCA 72 bp GTCCTTGTAAGACGTGACGCCGACGCCAAGCACAGATaGACACACATGCACGCTGCGTGTGAGGTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: VLVRRDADAKHR*THMHAACEVLR
Trigger: CCTCAGCACCTCACACGCAGCGTGCATGTGTGTGCATCTGTGCTTGGCGTCGGCGTCACGTCTTACAAGGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp CGAACTTCCCTTTGCCCTGGTAGACCAGCAGCCCACTaGGGCCCCGGAACTCAATGGTGTCTCCAATCTGCA +
Preference number: 6 (lower is better)
Translates to: RTSLCPGRPAAH*GPGTQWCLQSA
Trigger: TGCAGATTGGAGACACCATTGAGTTCCGGGGCCCCAGTGGGCTGCTGGTCTACCAGGGCAAAGGGAAGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000470741.1
CDS CCA 72 bp GTCTGTCCTGCTGGCCTAGAGGGGCCACAAACAAGGTaGCCAGAACAGGGAATGAACCCAGGGTCCCAAAGG +
Preference number: 6 (lower is better)
Translates to: VCPAGLEGPQTR*PEQGMNPGSQR
Trigger: CCTTTGGGACCCTGGGTTCATTCCCTGTTCTGGCCACCTTGTTTGTGGCCCCTCTAGGCCAGCAGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS TCA 72 bp GCAGCTGCCTCAAGGAGAGACCCGTCCCTACACGTGTaGGCAGAGGCAAATCGCAGGAAAGACGGTGCAAAC +
Preference number: 6 (lower is better)
Translates to: AAASRRDPSLHV*AEANRRKDGAN
Trigger: GTTTGCACCGTCTTTCCTGCGATTTGCCTCTGCTCACACGTGTAGGGACGGGTCTCTCCTTGAGGCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS TCA 72 bp CACCCTTCCCCAGTGCCTGCTTGTCCTTGTAAGACGTaGCGCCGACGCCAAGCACAGATGCACACACATGCA +
Preference number: 6 (lower is better)
Translates to: HPSPVPACPCKT*RRRQAQMHTHA
Trigger: TGCATGTGTGTGCATCTGTGCTTGGCGTCGGCGTCACGTCTTACAAGGACAAGCAGGCACTGGGGAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp AGAACAGGGAATGAACCCAGGGTCCCAAAGGGAGGATaGCAGACAGGACGGGGAGGGAGGAATCCATCTCTG +
Preference number: 6 (lower is better)
Translates to: RTGNEPRVPKGG*QTGRGGRNPSL
Trigger: CAGAGATGGATTCCTCCCTCCCCGTCCTGTCTGGCATCCTCCCTTTGGGACCCTGGGTTCATTCCCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp CGCAAAGCCACCATGGGCACAATGAGGGGGCAAAGCTaGAATCCTAGGACATCTGCCACATGCTCCCTTGTG +
Preference number: 6 (lower is better)
Translates to: RKATMGTMRGQS*NPRTSATCSLV
Trigger: CACAAGGGAGCATGTGGCAGATGTCCTAGGATTGCAGCTTTGCCCCCTCATTGTGCCCATGGTGGCTTTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp CCAGGTCCACGAAGCCCTTGTCATCATCGCTGGAGATaGGTGTATAGGGCCGGACGACCAGGTTTCCATCAA +
Preference number: 6 (lower is better)
Translates to: PGPRSPCHHRWR*VYRAGRPGFHQ
Trigger: TTGATGGAAACCTGGTCGTCCGGCCCTATACACCCATCTCCAGCGATGATGACAAGGGCTTCGTGGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000438270.1
ENST00000470741.1
CDS CAA 90 bp CCTCCCGCGATCATGCCCACAGACTTCACTGTCCTGATGATAGGGTaGGACTTTTTGTCAGGTCGGATGGCGAACTTCCCTTTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: PPAIMPTDFTVLMIG*DFLSGRMANFPLPW
Trigger: CCAGGGCAAAGGGAAGTTCGCCATCCGACCTGACAAAAAGTCCAACCCTATCATCAGGACAGTGAAGTCTGTGGGCATGATCGCGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS GCA 72 bp ACAACAGACCTCTCCAACAGGGCAGGACATCACAGATaGCCATCTCGGCTCAGTACGAGAACTCTCCGACCT +
Preference number: 6 (lower is better)
Translates to: TTDLSNRAGHHR*PSRLSTRTLRP
Trigger: AGGTCGGAGAGTTCTCGTACTGAGCCGAGATGGGCATCTGTGATGTCCTGCCCTGTTGGAGAGGTCTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CAA 72 bp TCCAGCGTGTACCAGAGCTTGAAGCGTGCAGAATGTTaGTTCCTGAGTTCCTCCAGCTCAGGTCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSVYQSLKRAEC*FLSSSSSGRSR
Trigger: CCTGCTGCGACCTGAGCTGGAGGAACTCAGGAACAAACATTCTGCACGCTTCAAGCTCTGGTACACGCTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS CAA 72 bp CAGGCTTCAGGGGCTCTGTCCAGCGTGTACCAGAGCTaGAAGCGTGCAGAATGTTTGTTCCTGAGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: QASGALSSVYQS*KRAECLFLSSS
Trigger: GGAGGAACTCAGGAACAAACATTCTGCACGCTTCAAGCTCTGGTACACGCTGGACAGAGCCCCTGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS CAA 72 bp GCCAGGGAAGGAGCTGAGACTAAAACCCCTGAGGTCTaGTTAAGTGGGTCTTACGCTCAGGCCAGGGACGAT +
Preference number: 6 (lower is better)
Translates to: AREGAETKTPEV*LSGSYAQARDD
Trigger: ATCGTCCCTGGCCTGAGCGTAAGACCCACTTAACAAGACCTCAGGGGTTTTAGTCTCAGCTCCTTCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp TGGGAAGAGCACCATATGGCCCAACTCCCAGCTCTCTaGTCTTTCAACATCAAGCCCATCTTGCTTCAGGCG +
Preference number: 6 (lower is better)
Translates to: WEEHHMAQLPAL*SFNIKPILLQA
Trigger: CGCCTGAAGCAAGATGGGCTTGATGTTGAAAGAGCAGAGAGCTGGGAGTTGGGCCATATGGTGCTCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS CAA 90 bp CCAGATTGGGCCAGGGAAGGAGCTGAGACTAAAACCCCTGAGGTCTaGTTAAGTGGGTCTTACGCTCAGGCCAGGGACGATCACATAATC +
Preference number: 6 (lower is better)
Translates to: PDWAREGAETKTPEV*LSGSYAQARDDHII
Trigger: GATTATGTGATCGTCCCTGGCCTGAGCGTAAGACCCACTTAACAAGACCTCAGGGGTTTTAGTCTCAGCTCCTTCCCTGGCCCAATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS GCA 72 bp CATCTTGCTTCAGGCGTTCGCATATGCTCTCCTCTCTaGCCCAAATGTCCTTGCTCTGCATGCATCCAACCA +
Preference number: 6 (lower is better)
Translates to: HLASGVRICSPL*PKCPCSACIQP
Trigger: TGGTTGGATGCATGCAGAGCAAGGACATTTGGGGCAGAGAGGAGAGCATATGCGAACGCCTGAAGCAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS CCA 72 bp GAGGCGCTTACATCCAAACGTGGCAAAGTCCACATGTaGATGGTGTCATCACTTAGAGGGGGACAACAGACC +
Preference number: 6 (lower is better)
Translates to: EALTSKRGKVHM*MVSSLRGGQQT
Trigger: GGTCTGTTGTCCCCCTCTAAGTGATGACACCATCCACATGTGGACTTTGCCACGTTTGGATGTAAGCGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp TTCTGCATTAGGGGCAAACAGAGCCCCAAGGCCTTCTaGAAGTGGATTCCAGGACTATCAACTGGTCCTAAG +
Preference number: 6 (lower is better)
Translates to: FCIRGKQSPKAF*KWIPGLSTGPK
Trigger: CTTAGGACCAGTTGATAGTCCTGGAATCCACTTCCAGAAGGCCTTGGGGCTCTGTTTGCCCCTAATGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp CGCTTACATCCAAACGTGGCAAAGTCCACATGTGGATaGTGTCATCACTTAGAGGGGGACAACAGACCTCTC +
Preference number: 6 (lower is better)
Translates to: RLHPNVAKSTCG*CHHLEGDNRPL
Trigger: GAGAGGTCTGTTGTCCCCCTCTAAGTGATGACACCATCCACATGTGGACTTTGCCACGTTTGGATGTAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CAA 72 bp CGTTCGCATATGCTCTCCTCTCTGCCCCAAATGTCCTaGCTCTGCATGCATCCAACCAGCAAACTCCTATTC +
Preference number: 6 (lower is better)
Translates to: RSHMLSSLPQMS*LCMHPTSKLLF
Trigger: GAATAGGAGTTTGCTGGTTGGATGCATGCAGAGCAAGGACATTTGGGGCAGAGAGGAGAGCATATGCGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361740.8
CDS CAA 72 bp ACAGACTTCACTGTCCTGATGATAGGGTTGGACTTTTaGTCAGGTCGGATGGCGAACTTCCCTTTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: TDFTVLMIGLDF*SGRMANFPLPW
Trigger: CCAGGGCAAAGGGAAGTTCGCCATCCGACCTGACAAAAAGTCCAACCCTATCATCAGGACAGTGAAGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352397.10
ENST00000361740.8
ENST00000402438.5
ENST00000407332.5
ENST00000407623.7
ENST00000470741.1
CDS CCA 72 bp ATAGAAATGAGGACAAGAGATGAACAATTATGGTGCTaGCCAACCTCTAGTAGGGCAGCAGGGTGGGGCAAA +
Preference number: 6 (lower is better)
Translates to: IEMRTRDEQLWC*PTSSRAAGWGK
Trigger: TTTGCCCCACCCTGCTGCCCTACTAGAGGTTGGCCAGCACCATAATTGTTCATCTCTTGTCCTCATTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1
CDS CCA 72 bp AAAAGAATAGAAATGAGGACAAGAGATGAACAATTATaGTGCTGGCCAACCTCTAGTAGGGCAGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: KRIEMRTRDEQL*CWPTSSRAAGW
Trigger: CCACCCTGCTGCCCTACTAGAGGTTGGCCAGCACCATAATTGTTCATCTCTTGTCCTCATTTCTATTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470741.1