RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYB5R2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166394

Ensembl transcript IDs: ENST00000299498.11, ENST00000436351.2, ENST00000524608.5, ENST00000524790.5, ENST00000525307.1, ENST00000526084.1, ENST00000527542.5, ENST00000528585.5, ENST00000531096.5, ENST00000532621.1, ENST00000532920.1, ENST00000533558.5, ENST00000534443.5

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCTCCAGCCGAGGTGTGTaGATCAGTACAGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PRRKILKWSSFQPPSKEASSRGV*ISTASW
Trigger: CCAGCTGGCTGTACTGATTCACACACCTCGGCTGGA...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR GCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCGCTGGAGGAGGAAGGTaGTCCTTGATCATGTCGGCA +
Preference number: 2 (lower is better)
Translates to: PRRKILKWSSFQPPSKEAAGGGR*SLIMSA
Trigger: TGCCGACATGATCAAGGAGCACCTTCCTCCTCCAGC...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR CCA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAATCAGTACAGCCAGCTaGAGTTGTCCGGCAGGGTGT +
Preference number: 2 (lower is better)
Translates to: EPFLLGPHPKEENQCVREISTAS*SCPAGC
Trigger: ACACCCTGCCGGACAACTCCAGCTGGCTGTACTGAT...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR TCA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCAGTAACGAAGCCTaGGCTGTACTTCCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: KTTEKDTEMELFPASKQGGSNEA*AVLPAE
Trigger: CTCGGCTGGAAGTACAGCTCAGGCTTCGTTACTGCC...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR GCA 90 bp GAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCAGGAGAACCAGTGTGTaGGCGAAGGTACATGGCAAG +
Preference number: 2 (lower is better)
Translates to: EENQCVREGTWQGTFENIRRTSV*AKVHGK
Trigger: CTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT...GATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR-3UTR TCA 90 bp AGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCGACATGCAAAATTGCTaGGCACGTGGAGGTGTTAGT +
Preference number: 2 (lower is better)
Translates to: RRTSVCAKVHGKALLKTSDMQNC*ARGGVS
Trigger: ACTAACACCTCCACGTGCTCAGCAATTTTGCATGTC...GGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR TCA 90 bp TTGAGTTTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGGCCACACACCAGGATaGGCGTGGACTTCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LSLFHKTTEKDTEMELFPGHTPG*AWTSLE
Trigger: CTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCC...TGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR TCA 90 bp GAGCACGTGGAGGTGTTAGTAGGTGAAAATCATGTCCTGGGTATAACCCAGCTTATGGCAAGGCACTTTTaGAAACATCCCAGTTTACCG +
Preference number: 2 (lower is better)
Translates to: EHVEVLVGENHVLGITQLMARHF*KHPSLP
Trigger: CGGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCAT...AAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAACACCTCCACGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR TCA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGATGGCAAGGCACTTTTaGAAACATCCCAGTTTACCG +
Preference number: 2 (lower is better)
Translates to: KPRRKILKWSSFQPPSKEMARHF*KHPSLP
Trigger: CGGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCAT...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR-3UTR CCA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGGTGCGCGAAGGTACATaGCAAGGCACTTTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: FHKTTEKDTEMELFPASKVREGT*QGTFEN
Trigger: GTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCAC...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR-3UTR TCA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGGGAGGTGTTAGTAGGTaGAAATCATGTCCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: FHKTTEKDTEMELFPASKGGVSR*KSCPGY
Trigger: ATACCCAGGACATGATTTTCACCTACTAACACCTCC...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR GCA 90 bp TTGAGTTTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAAGGAGAACCAGTGTGTaGGCGAAGGTACATGGCAAG +
Preference number: 2 (lower is better)
Translates to: LSLFHKTTEKDTEMELFPRRTSV*AKVHGK
Trigger: CTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT...TGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR-3UTR CCA 90 bp TTGAGTTTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGTGCGCGAAGGTACATaGCAAGGCACTTTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: LSLFHKTTEKDTEMELFPVREGT*QGTFEN
Trigger: GTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCAC...TGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR-3UTR TCA 90 bp TTGAGTTTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAATGGCAAGGCACTTTTaGAAACATCCCAGTTTACCG +
Preference number: 2 (lower is better)
Translates to: LSLFHKTTEKDTEMELFPMARHF*KHPSLP
Trigger: CGGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCAT...TGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR TCA 72 bp CCGTCTGGATTAGTGGTGGCGGGCCACACACCAGGATaGGCGTGGACTTCGCTGGAGGAGGAAGGTGCTCCT +
Preference number: 3 (lower is better)
Translates to: PSGLVVAGHTPG*AWTSLEEEGAP
Trigger: AGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCCCGCCACCACTAATCCAGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR CCA 72 bp TGGCGGGCCACACACCAGGATGAGCGTGGACTTCGCTaGAGGAGGAAGGTGCTCCTTGATCATGTCGGCAGT +
Preference number: 3 (lower is better)
Translates to: WRATHQDERGLR*RRKVLLDHVGS
Trigger: ACTGCCGACATGATCAAGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
3UTR-3UTR CAA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAACATGGCAAGGCACTTTaGAAAACATCCCAGTTTACC +
Preference number: 3 (lower is better)
Translates to: EPFLLGPHPKEENQCVREHGKAL*KTSQFT
Trigger: GGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCATG...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR-3UTR CAA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGACCCCTTGAGCCCTTTTaGTTAGGCCCACACCCAAAA +
Preference number: 3 (lower is better)
Translates to: KTTEKDTEMELFPASKQGPLEPF*LGPHPK
Trigger: TTTTGGGTGTGGGCCTAACAAAAAGGGCTCAAGGGG...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR-3UTR CAA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCCATGGCAAGGCACTTTaGAAAACATCCCAGTTTACC +
Preference number: 3 (lower is better)
Translates to: LFHKTTEKDTEMELFPASHGKAL*KTSQFT
Trigger: GGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCATG...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCGGGGCGCTGAGCCGTaGCGTCCTCGCTCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEARGAEP*RPRSCA
Trigger: AGCGCAGGAGCGAGGACGCCACGGCTCAGCGCCCCG...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR TCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTAGAAGGCCGTCTGGGTaGCCGGGCGGAGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGRRPSG*PGGGGC
Trigger: GCATCCCCCTCCGCCCGGTCACCCAGACGGCCTTCT...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR TCA 90 bp GAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCAGGCTGGCGGGGCGCTaGGCCGTGGCGTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: EENQCVREGTWQGTFENIRLAGR*AVASSL
Trigger: GAGCGAGGACGCCACGGCTCAGCGCCCCGCCAGCCT...GATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCGGCAGCGCTCCATCATaGGGCTGGCGGGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEAGSAPS*GWRGAE
Trigger: CTCAGCGCCCCGCCAGCCTCATGATGGAGCGCTGCC...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR CCA 90 bp TACTTCCAGCCGAGGTGTGTGAATCAGTACAGCCAGCTGGAGTTGTCCGGCAGGCCGACCAGGGACCAATaGGAGGCCTGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: YFQPRCVNQYSQLELSGRPTRDQ*EACPGC
Trigger: ACACCCTGGACAGGCCTCCCATTGGTCCCTGGTCGG...CCTGCCGGACAACTCCAGCTGGCTGTACTGATTCACACACCTCGGCTGGAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR CCA 90 bp GTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCATCACTCACGAGCCGCTaGCTCTGGGTCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VRPTPKRGEPVCARRYMASLTSR*LWVSPA
Trigger: GGCAGGGCTGACCCAGAGCCAGCGGCTCGTGAGTGA...TGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR GCA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGTCCTCGCTCCTGCGCTaGCCCTCTGCATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLSSLLR*PSASWP
Trigger: GGGCCAGGATGCAGAGGGGCAGCGCAGGAGCGAGGA...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR TCA 90 bp AGTGGTGGCGGGCCACACACCAGGATGAGCGTGGACTTCGCTGGAGGAGGAAGGTTGAACTGGTCTGGGTaGGTCCTGGCAATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SGGGPHTRMSVDFAGGGRLNWSG*VLAISS
Trigger: TGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAA...CCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCCCGCCACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR TCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTGGCCACACACCAGGATaGGCGTGGACTTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGGHTPG*AWTSLE
Trigger: CTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCC...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGCCCGACAGGGAAAGTTaGCTCTCCTCCCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLPDRES*LSSRRV
Trigger: GACCCGGCGGGAGGAGAGGCAACTTTCCCTGTCGGG...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299498.11
CDS-3UTR GCA 90 bp CCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTCCTACAAGGCCGCCCTaGTCCTCTCCCAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: PHPKEENQCVREGTWQGTPTRPP*SSPNSS
Trigger: GCTTGAGTTGGGAGAGGAGCAGGGCGGCCTTGTAGG...AGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299498.11
ENST00000524790.5
CDS-3UTR TCA 90 bp CCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTCAGGGTCCTGTAAGGTaGTTGGCTCTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PHPKEENQCVREGTWQGTQGPVR*LALSSW
Trigger: CCAGGAGGAGAGAGCCAATCACCTTACAGGACCCTG...AGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGGCCACACACCAGGATaGGCGTGGACTTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HPKEENQCVREGTWQGTFGHTPG*AWTSLE
Trigger: CTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCC...AAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCGGCCACACACCAGGATaGGCGTGGACTTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TTEKDTEMELFPASKQGGGHTPG*AWTSLE
Trigger: CTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCC...GCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACCAGGATGAGCGTGGACTTCGCTGGAGGAGGAAGGTGCTCCTTGATCATGTCGTTCTCCAGGTTAGGGTaGGCCGCCGTCTGGATTAGT +
Preference number: 4 (lower is better)
Translates to: TRMSVDFAGGGRCSLIMSFSRLG*AAVWIS
Trigger: ACTAATCCAGACGGCGGCTCACCCTAACCTGGAGAA...CGACATGATCAAGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR TCA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGGACGGGTCCCGGAGTaGGACGCCCAACACGTCGTC +
Preference number: 4 (lower is better)
Translates to: KPRRKILKWSSFQPPSKEGRVPE*DAQHVV
Trigger: GACGACGTGTTGGGCGTCTCACTCCGGGACCCGTCC...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR GCA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAACCTACAAGGCCGCCCTaGTCCTCTCCCAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: EPFLLGPHPKEENQCVREPTRPP*SSPNSS
Trigger: GCTTGAGTTGGGAGAGGAGCAGGGCGGCCTTGTAGG...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299498.11
ENST00000524790.5
CDS-3UTR CCA 90 bp AAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCCAGCAGCCGAGCGTGGACTTCGCTaGAGGAGGAAGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KILKWSSFQPPSKEAPAAERGLR*RRKVLL
Trigger: AAGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTC...GGCTGCTGGGGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp GTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAGAGCGTGGACTTCGCTaGAGGAGGAAGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VRPTPKRGEPVCARRYMAERGLR*RRKVLL
Trigger: AAGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTC...TGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTCTCCAGGTTAGGGTaGGCCGCCGTCTGGATTAGT +
Preference number: 4 (lower is better)
Translates to: PHPKEENQCVREGTWQGTFSRLG*AAVWIS
Trigger: ACTAATCCAGACGGCGGCTCACCCTAACCTGGAGAA...AGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGCAGTAACGAAGCCTaGGCTGTACTTCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: EPFLLGPHPKEENQCVREGSNEA*AVLPAE
Trigger: CTCGGCTGGAAGTACAGCTCAGGCTTCGTTACTGCC...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR GCA 90 bp GAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCCACTGCACACGCAGAGCTaGCACACTGAGCGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ENQCVREGTWQGTFENIPLHTQS*HTERPS
Trigger: TGAGGGGCGCTCAGTGTGGCAGCTCTGCGTGTGCAG...TGGGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR GCA 90 bp AGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCTCCTGGCCCCTTCCCTaGACACGCAGAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RRTSVCAKVHGKALLKTSSWPLP*TRRAAT
Trigger: TGTGGCAGCTCTGCGTGTGCAGGGAAGGGGCCAGGA...GGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR CCA 90 bp ACCAGGATGAGCGTGGACTTCGCTGGAGGAGGAAGGTGCTCCTTGATCATGTCGCTCTGTCATCATCACTaGAGACAGGGGTGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: TRMSVDFAGGGRCSLIMSLCHHH*RQGCKP
Trigger: GGGCTTACACCCCTGTCTCCAGTGATGATGACAGAG...CGACATGATCAAGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR CCA 90 bp GTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCATGTACTTCCAGCCAATaGGAGGCCTGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VRPTPKRGEPVCARRYMACTSSQ*EACPGC
Trigger: ACACCCTGGACAGGCCTCCCATTGGCTGGAAGTACA...TGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299498.11
ENST00000533558.5
CDS-3UTR CCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTGAGCGTGGACTTCGCTaGAGGAGGAAGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGERGLR*RRKVLL
Trigger: AAGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTC...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGAACACGTCGTCGAACTaGGGTTGGCCGGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: KPRRKILKWSSFQPPSKENTSSN*GWPGAA
Trigger: AGCGGCCCCCGGCCAACCCCAGTTCGACGACGTGTT...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR TCA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTCAGGGTCCTGTAAGGTaGTTGGCTCTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPKRGEPVCARRYMARHFQGPVR*LALSSW
Trigger: CCAGGAGGAGAGAGCCAATCACCTTACAGGACCCTG...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCTCGTCTGGTCTGGTCTaGTTCCAAGATTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEASSGLV*FQDSLA
Trigger: GGCCAGGGAATCTTGGAATCAGACCAGACCAGACGA...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTTCGTCTGGTCTGGTCTaGTTCCAAGATTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGSSGLV*FQDSLA
Trigger: GGCCAGGGAATCTTGGAATCAGACCAGACCAGACGA...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp GAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCGCTGCAACATGGGTGTaGTGCCTGTGCCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: EENQCVREGTWQGTFENIAATWV*CLCPQQ
Trigger: TTGCTGGGGGCACAGGCATCACACCCATGTTGCAGC...GATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp AAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCCAGCAGCCTCTGGTTGGCAAAGATaGGGGACATCCTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KILKWSSFQPPSKEAPAASGWQR*GTSWSC
Trigger: ACAGGACCAGGATGTCCCTCATCTTTGCCAACCAGA...GGCTGCTGGGGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp AGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCGCAGAGCTGCCACACTaGGCGCCCCTCAGCTTACTT +
Preference number: 4 (lower is better)
Translates to: RRTSVCAKVHGKALLKTSAELPH*APLSLL
Trigger: AAGTAAGCTGAGGGGCGCTCAGTGTGGCAGCTCTGC...GGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS-3UTR GCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTGCTGGAGGAGGAAGGTaGTCCTTGATCATGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGAGGGR*SLIMSA
Trigger: TGCCGACATGATCAAGGAGCACCTTCCTCCTCCAGC...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp TTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGGCTGGAGGAGGAAGGTaGTCCTTGATCATGTCGGCA +
Preference number: 4 (lower is better)
Translates to: LLGPHPKEENQCVREGTWAGGGR*SLIMSA
Trigger: TGCCGACATGATCAAGGAGCACCTTCCTCCTCCAGC...CCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCCAGCAGCCCTCTGTCATCATCACTaGAGACAGGGGTGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: KILKWSSFQPPSKEAPAALCHHH*RQGCKP
Trigger: GGGCTTACACCCCTGTCTCCAGTGATGATGACAGAG...GGCTGCTGGGGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCTCGTCTGGTCTGGTCTaGTTCCAAGATTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TTEKDTEMELFPASKQGGSSGLV*FQDSLA
Trigger: GGCCAGGGAATCTTGGAATCAGACCAGACCAGACGA...GCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCTCTGGTTGGCAAAGATaGGGGACATCCTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEASGWQR*GTSWSC
Trigger: ACAGGACCAGGATGTCCCTCATCTTTGCCAACCAGA...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGCAGTAACGAAGCCTaGGCTGTACTTCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: EPFLLGPHPKEENQCVREGSNEA*AVLPAN
Trigger: ATTGGCTGGAAGTACAGCTCAGGCTTCGTTACTGCC...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299498.11
ENST00000533558.5
CDS-3UTR GCA 90 bp CCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTATGTGGCGAATGAGCTaGAACATGGGTGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: PHPKEENQCVREGTWQGTMWRMS*NMGVMP
Trigger: AGGCATCACACCCATGTTGCAGCTCATTCGCCACAT...AGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTGCTGGAGGAGGAAGGTaGTCCTTGATCATGTCGGCA +
Preference number: 4 (lower is better)
Translates to: TPKRGEPVCARRYMARHFAGGGR*SLIMSA
Trigger: TGCCGACATGATCAAGGAGCACCTTCCTCCTCCAGC...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAAGGAGAACCAGTGTGTaGGCGAAGGTACATGGCAAG +
Preference number: 4 (lower is better)
Translates to: EPFLLGPHPKEENQCVRERRTSV*AKVHGK
Trigger: CTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTAGGAGAACCAGTGTGTaGGCGAAGGTACATGGCAAG +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGRRTSV*AKVHGK
Trigger: CTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp GTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCACAGGTTGAACTGGTCTaGGTGAGTCCTGGCAATTTC +
Preference number: 4 (lower is better)
Translates to: VRPTPKRGEPVCARRYMAQVELV*VSPGNF
Trigger: GAAATTGCCAGGACTCACCCAGACCAGTTCAACCTG...TGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTCAGGTTGAACTGGTCTaGGTGAGTCCTGGCAATTTC +
Preference number: 4 (lower is better)
Translates to: PHPKEENQCVREGTWQGTQVELV*VSPGNF
Trigger: GAAATTGCCAGGACTCACCCAGACCAGTTCAACCTG...AGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp ACCAGGATGAGCGTGGACTTCGCTGGAGGAGGAAGGTGCTCCTTGATCATGTCGGTGCGCGAAGGTACATaGCAAGGCACTTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: TRMSVDFAGGGRCSLIMSVREGT*QGTFEN
Trigger: GTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCAC...CGACATGATCAAGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR TCA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTCTGGTTGGCAAAGATaGGGGACATCCTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TPKRGEPVCARRYMARHFSGWQR*GTSWSC
Trigger: ACAGGACCAGGATGTCCCTCATCTTTGCCAACCAGA...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KPRRKILKWSSFQPPSKEGCTTG*TGLGES
Trigger: GGACTCACCCAGACCAGTTCAACCTGTGGTACACCC...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CACGTGGAGGTGTTAGTAGGTGAAAATCATGTCCTGGGTATAACCCAGCTTCTCTCCAGCCGAGGTGTGTaGATCAGTACAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HVEVLVGENHVLGITQLLSSRGV*ISTASW
Trigger: CCAGCTGGCTGTACTGATTCACACACCTCGGCTGGA...GAGAAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAACACCTCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR GCA 90 bp AGTGGTGGCGGGCCACACACCAGGATGAGCGTGGACTTCGCTGGAGGAGGAAGGTTCATTATCGATTTTTaGCAAGAGCTGGACATAGTT +
Preference number: 4 (lower is better)
Translates to: SGGGPHTRMSVDFAGGGRFIIDF*QELDIV
Trigger: AACTATGTCCAGCTCTTGGCAAAAATCGATAATGAA...CCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCCCGCCACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR GCA 90 bp TTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGATGTGGCGAATGAGCTaGAACATGGGTGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: LLGPHPKEENQCVREGTWMWRMS*NMGVMP
Trigger: AGGCATCACACCCATGTTGCAGCTCATTCGCCACAT...CCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CACGTGGAGGTGTTAGTAGGTGAAAATCATGTCCTGGGTATAACCCAGCTTCTCAGGGCAGCGGGTACTTaGCTTCAGGGTCCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: HVEVLVGENHVLGITQLLRAAGT*LQGPVR
Trigger: CCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCT...GAGAAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAACACCTCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR CCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCTCACTCGTCTGGTCTaGTCTGATTCCAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEALTRLV*SDSKIP
Trigger: GGGAATCTTGGAATCAGACCAGACCAGACGAGTGAG...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp GCAGTAACGAAGCCTGAGCTGTACTTCCAGCCGAGGTGTGTGAATCAGTACAGCCTCACTCGTCTGGTCTaGTCTGATTCCAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: AVTKPELYFQPRCVNQYSLTRLV*SDSKIP
Trigger: GGGAATCTTGGAATCAGACCAGACCAGACGAGTGAG...GCTGTACTGATTCACACACCTCGGCTGGAAGTACAGCTCAGGCTTCGTTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR CCA 90 bp CACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGGGTCCTTGGTGATGTaGCGAATGAGCTGCAACATG +
Preference number: 4 (lower is better)
Translates to: HPKEENQCVREGTWQGTFGSLVM*RMSCNM
Trigger: CATGTTGCAGCTCATTCGCCACATCACCAAGGACCC...AAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp GTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAATATCCTCCTCTGTCTaGTTGGCAAAGATGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VRPTPKRGEPVCARRYMAISSSV*LAKMRD
Trigger: GTCCCTCATCTTTGCCAACCAGACAGAGGAGGATAT...TGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGCAGGGGTGTAAGCCCTaGCCACCAATTCATTATCGA +
Preference number: 4 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLQGCKP*PPIHYR
Trigger: TCGATAATGAATTGGTGGTCAGGGCTTACACCCCTG...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTCTTCAAGCTCTTTTCTaGCCAAGATATCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PHPKEENQCVREGTWQGTLQALF*PRYPPL
Trigger: CAGAGGAGGATATCTTGGTCAGAAAAGAGCTTGAAG...AGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCTTGAACTGGTCTGGGTaGGTCCTGGCAATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEALNWSG*VLAISS
Trigger: TGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAA...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp GAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCCAGGCAGTAACGAAGCCTaGGCTGTACTTCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: ENQCVREGTWQGTFENIPGSNEA*AVLPAN
Trigger: ATTGGCTGGAAGTACAGCTCAGGCTTCGTTACTGCC...TGGGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299498.11
ENST00000533558.5
CDS-3UTR TCA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGTTCTCCAGGTTAGGGTaGGCCGCCGTCTGGATTAGT +
Preference number: 4 (lower is better)
Translates to: KPRRKILKWSSFQPPSKEFSRLG*AAVWIS
Trigger: ACTAATCCAGACGGCGGCTCACCCTAACCTGGAGAA...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTGACATGCAAAATTGCTaGGCACGTGGAGGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGDMQNC*ARGGVS
Trigger: ACTAACACCTCCACGTGCTCAGCAATTTTGCATGTC...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCCAGCAGCCAACCTCCGGGTGTTGTaGCTGATTTTCTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KILKWSSFQPPSKEAPAANLRVL*LIFSFS
Trigger: TGAGAAAGAGAAAATCAGCCACAACACCCGGAGGTT...GGCTGCTGGGGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp GAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCTCTGTCATCATCACTaGAGACAGGGGTGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: EENQCVREGTWQGTFENILCHHH*RQGCKP
Trigger: GGGCTTACACCCCTGTCTCCAGTGATGATGACAGAG...GATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTCAGGTTGAACTGGTCTaGGTGAGTCCTGGCAATTTC +
Preference number: 4 (lower is better)
Translates to: TPKRGEPVCARRYMARHFQVELV*VSPGNF
Trigger: GAAATTGCCAGGACTCACCCAGACCAGTTCAACCTG...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTGTGCGCGAAGGTACATaGCAAGGCACTTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PFLLGPHPKEENQCVREGVREGT*QGTFEN
Trigger: GTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCAC...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp AAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCCAGCAGCCATGTTCTCCAAATACTaGGTCATCTTCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: KILKWSSFQPPSKEAPAAMFSKY*VIFPPS
Trigger: TGAAGGTGGGAAGATGACTCAGTATTTGGAGAACAT...GGCTGCTGGGGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCGCTGCAACATGGGTGTaGTGCCTGTGCCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASAATWV*CLCPQQ
Trigger: TTGCTGGGGGCACAGGCATCACACCCATGTTGCAGC...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCTTCAAGCTCTTTTCTaGCCAAGATATCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEALQALF*PRYPPL
Trigger: CAGAGGAGGATATCTTGGTCAGAAAAGAGCTTGAAG...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCGGAGGTGTTAGTAGGTaGAAATCATGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEAGGVSR*KSCPGY
Trigger: ATACCCAGGACATGATTTTCACCTACTAACACCTCC...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAATGGCAAGGCACTTTTaGAAACATCCCAGTTTACCG +
Preference number: 4 (lower is better)
Translates to: EPFLLGPHPKEENQCVREMARHF*KHPSLP
Trigger: CGGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCAT...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTCACGGAGAAAGATACTaGAATGGAGCTCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HPKEENQCVREGTWQGTFHGERY*NGALSS
Trigger: GCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTG...AAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp GAGCACGTGGAGGTGTTAGTAGGTGAAAATCATGTCCTGGGTATAACCCAGCTTAGGAGAACCAGTGTGTaGGCGAAGGTACATGGCAAG +
Preference number: 4 (lower is better)
Translates to: EHVEVLVGENHVLGITQLRRTSV*AKVHGK
Trigger: CTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT...AAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAACACCTCCACGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR CCA 90 bp GAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCCATTGGCTCTCTCCTCCTaGAGTTCATGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ENQCVREGTWQGTFENIPLALSS*SSCSSG
Trigger: TCCTGAAGAGCATGAACTCCAGGAGGAGAGAGCCAA...TGGGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCTTGGCTCTCTCCTCCTaGAGTTCATGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RRTSVCAKVHGKALLKTSLALSS*SSCSSG
Trigger: TCCTGAAGAGCATGAACTCCAGGAGGAGAGAGCCAA...GGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCAACCTCCGGGTGTTGTaGCTGATTTTCTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEANLRVL*LIFSFS
Trigger: TGAGAAAGAGAAAATCAGCCACAACACCCGGAGGTT...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAACTCACTCGTCTGGTCTaGTCTGATTCCAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: PKEENQCVREGTWQGTFELTRLV*SDSKIP
Trigger: GGGAATCTTGGAATCAGACCAGACCAGACGAGTGAG...TTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTGGTCTGGGTGAGTCCTaGCAATTTCTTCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TPKRGEPVCARRYMARHFGLGES*QFLQAL
Trigger: AAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACC...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp ACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCGGTCTGGGTGAGTCCTaGCAATTTCTTCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TTEKDTEMELFPASKQGGGLGES*QFLQAL
Trigger: AAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACC...GCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAATCAGTACAGCCAGCTaGAGTTGTCCGGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KTTEKDTEMELFPASKQGISTAS*SCPAGC
Trigger: ACACCCTGCCGGACAACTCCAGCTGGCTGTACTGAT...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR TCA 90 bp ACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCTCCGGGTGTTGTGGCTaGTTTTCTCTTTCTCAATCA +
Preference number: 4 (lower is better)
Translates to: TTEKDTEMELFPASKQGGSGCCG*FSLSQS
Trigger: TGATTGAGAAAGAGAAAATCAGCCACAACACCCGGA...GCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGCAGGGGTGTAAGCCCTaGCCACCAATTCATTATCGA +
Preference number: 4 (lower is better)
Translates to: KPRRKILKWSSFQPPSKEQGCKP*PPIHYR
Trigger: TCGATAATGAATTGGTGGTCAGGGCTTACACCCCTG...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp GAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCGACATGCAAAATTGCTaGGCACGTGGAGGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: EENQCVREGTWQGTFENIDMQNC*ARGGVS
Trigger: ACTAACACCTCCACGTGCTCAGCAATTTTGCATGTC...GATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTATGGCAAGGCACTTTTaGAAACATCCCAGTTTACCG +
Preference number: 4 (lower is better)
Translates to: TPKRGEPVCARRYMARHFMARHF*KHPSLP
Trigger: CGGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCAT...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp AGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCCACGGAGAAAGATACTaGAATGGAGCTCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRTSVCAKVHGKALLKTSHGERY*NGALSS
Trigger: GCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTG...GGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCCCACCTTCAGGATATTaGGGGTGTACATTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PRRKILKWSSFQPPSKEAPPSGY*GCTFLK
Trigger: CTTCAAAAATGTACACCCCCAATATCCTGAAGGTGG...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp GAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCGATTCCAAGATTCCCTaGCCCATGGTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: EENQCVREGTWQGTFENIDSKIP*PMVKQA
Trigger: CGCTTGTTTTACCATGGGCCAGGGAATCTTGGAATC...GATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCTTAGGCTCACTCGTCTaGTCTGGTCTGATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RRTSVCAKVHGKALLKTSLGSLV*SGLIPR
Trigger: TCTTGGAATCAGACCAGACCAGACGAGTGAGCCTAA...GGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp GAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCCAATATCCTCCTCTGTCTaGTTGGCAAAGATGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ENQCVREGTWQGTFENIPISSSV*LAKMRD
Trigger: GTCCCTCATCTTTGCCAACCAGACAGAGGAGGATAT...TGGGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGACAGGGGTGTAAGCCCTaGCCACCAATTCATTATCGA +
Preference number: 4 (lower is better)
Translates to: KTTEKDTEMELFPASKQGQGCKP*PPIHYR
Trigger: TCGATAATGAATTGGTGGTCAGGGCTTACACCCCTG...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp CACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTATGTTCTCCAAATACTaGGTCATCTTCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HPKEENQCVREGTWQGTFMFSKY*VIFPPS
Trigger: TGAAGGTGGGAAGATGACTCAGTATTTGGAGAACAT...AAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGATCCTCCTGGAGTTCATaGTCTTCAGGACCAACACGA +
Preference number: 4 (lower is better)
Translates to: KTTEKDTEMELFPASKQGSSWSS*SSGPTR
Trigger: TCGTGTTGGTCCTGAAGAGCATGAACTCCAGGAGGA...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGATTGGCTCTCTCCTCCTaGAGTTCATGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KTTEKDTEMELFPASKQGLALSS*SSCSSG
Trigger: TCCTGAAGAGCATGAACTCCAGGAGGAGAGAGCCAA...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp CACGTGGAGGTGTTAGTAGGTGAAAATCATGTCCTGGGTATAACCCAGCTTCTCGATTCCAAGATTCCCTaGCCCATGGTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: HVEVLVGENHVLGITQLLDSKIP*PMVKQA
Trigger: CGCTTGTTTTACCATGGGCCAGGGAATCTTGGAATC...GAGAAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAACACCTCCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR CCA 90 bp GAGCACGTGGAGGTGTTAGTAGGTGAAAATCATGTCCTGGGTATAACCCAGCTTTTAGGCTCACTCGTCTaGTCTGGTCTGATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EHVEVLVGENHVLGITQLLGSLV*SGLIPR
Trigger: TCTTGGAATCAGACCAGACCAGACGAGTGAGCCTAA...AAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAACACCTCCACGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS-3UTR CCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCTGTACTTCCAGCCAATaGGAGGCCTGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASCTSSQ*EACPGC
Trigger: ACACCCTGGACAGGCCTCCCATTGGCTGGAAGTACA...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299498.11
ENST00000533558.5
CDS-3UTR CCA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGATTCCAAGATTCCCTaGCCCATGGTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: KTTEKDTEMELFPASKQGDSKIP*PMVKQA
Trigger: CGCTTGTTTTACCATGGGCCAGGGAATCTTGGAATC...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAATATCCTCCTCTGTCTaGTTGGCAAAGATGAGGGAC +
Preference number: 4 (lower is better)
Translates to: KTTEKDTEMELFPASKQGISSSV*LAKMRD
Trigger: GTCCCTCATCTTTGCCAACCAGACAGAGGAGGATAT...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
3UTR CAA 72 bp ACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTaGAAAACATCCCAGTTTACCGTGGTGAAATTGAAC +
Preference number: 4 (lower is better)
Translates to: TSVCAKVHGKAL*KTSQFTVVKLN
Trigger: GTTCAATTTCACCACGGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACTTTTGAAAACATCCCAGTTTACCGTGGTGAAATTGAACTTACTCTGAAACAGCAGGGTCCTGTAAGGTaGTTGGCTCTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TFENIPVYRGEIELTLKQQGPVR*LALSSW
Trigger: CCAGGAGGAGAGAGCCAATCACCTTACAGGACCCTG...CTGTTTCAGAGTAAGTTCAATTTCACCACGGTAAACTGGGATGTTTTCAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACTTTTGAAAACATCCCAGTTTACCGTGGTGAAATTGAACTTACTCTGAAACAGGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TFENIPVYRGEIELTLKQGCTTG*TGLGES
Trigger: GGACTCACCCAGACCAGTTCAACCTGTGGTACACCC...CTGTTTCAGAGTAAGTTCAATTTCACCACGGTAAACTGGGATGTTTTCAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCTCCTCCTGGAGTTCATaGTCTTCAGGACCAACACGA +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASSSWSS*SSGPTR
Trigger: TCGTGTTGGTCCTGAAGAGCATGAACTCCAGGAGGA...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp TTGAGTTTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAAGGGCAGCGGGTACTTaGCTTCAGGGTCCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LSLFHKTTEKDTEMELFPRAAGT*LQGPVR
Trigger: CCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCT...TGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAAACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGGGTCTGGGTGAGTCCTaGCAATTTCTTCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FHKTTEKDTEMELFPASKGLGES*QFLQAL
Trigger: AAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACC...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCTTCAAGCTCTTTTCTaGCCAAGATATCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FHKTTEKDTEMELFPASKLQALF*PRYPPL
Trigger: CAGAGGAGGATATCTTGGTCAGAAAAGAGCTTGAAG...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp CACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTTTCATTATCGATTTTTaGCAAGAGCTGGACATAGTT +
Preference number: 4 (lower is better)
Translates to: HPKEENQCVREGTWQGTFFIIDF*QELDIV
Trigger: AACTATGTCCAGCTCTTGGCAAAAATCGATAATGAA...AAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR GCA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGTTCATTATCGATTTTTaGCAAGAGCTGGACATAGTT +
Preference number: 4 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLFIIDF*QELDIV
Trigger: AACTATGTCCAGCTCTTGGCAAAAATCGATAATGAA...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCTTAGGCTCACTCGTCTaGTCTGGTCTGATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASLGSLV*SGLIPR
Trigger: TCTTGGAATCAGACCAGACCAGACGAGTGAGCCTAA...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCGGAGGTGTTAGTAGGTaGAAATCATGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASGGVSR*KSCPGY
Trigger: ATACCCAGGACATGATTTTCACCTACTAACACCTCC...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCATGGCAAGGCACTTTTaGAAACATCCCAGTTTACCG +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASMARHF*KHPSLP
Trigger: CGGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCAT...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAACCTCCGGGTGTTGTaGCTGATTTTCTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASNLRVL*LIFSFS
Trigger: TGAGAAAGAGAAAATCAGCCACAACACCCGGAGGTT...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCCACCTTCAGGATATTaGGGGTGTACATTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: FHKTTEKDTEMELFPASKPPSGY*GCTFLK
Trigger: CTTCAAAAATGTACACCCCCAATATCCTGAAGGTGG...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp ACTTTTGAAAACATCCCAGTTTACCGTGGTGAAATTGAACTTACTCTGAAACAGGGGTCCTTGGTGATGTaGCGAATGAGCTGCAACATG +
Preference number: 4 (lower is better)
Translates to: TFENIPVYRGEIELTLKQGSLVM*RMSCNM
Trigger: CATGTTGCAGCTCATTCGCCACATCACCAAGGACCC...CTGTTTCAGAGTAAGTTCAATTTCACCACGGTAAACTGGGATGTTTTCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CCA 90 bp TTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCCCACCTTCAGGATATTaGGGGTGTACATTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LFHKTTEKDTEMELFPASPPSGY*GCTFLK
Trigger: CTTCAAAAATGTACACCCCCAATATCCTGAAGGTGG...GGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACTTTTGAAAACATCCCAGTTTACCGTGGTGAAATTGAACTTACTCTGAAACAGCACGGAGAAAGATACTaGAATGGAGCTCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TFENIPVYRGEIELTLKQHGERY*NGALSS
Trigger: GCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTG...CTGTTTCAGAGTAAGTTCAATTTCACCACGGTAAACTGGGATGTTTTCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp ACTTTTGAAAACATCCCAGTTTACCGTGGTGAAATTGAACTTACTCTGAAACAGTCCGGGTGTTGTGGCTaGTTTTCTCTTTCTCAATCA +
Preference number: 4 (lower is better)
Translates to: TFENIPVYRGEIELTLKQSGCCG*FSLSQS
Trigger: TGATTGAGAAAGAGAAAATCAGCCACAACACCCGGA...CTGTTTCAGAGTAAGTTCAATTTCACCACGGTAAACTGGGATGTTTTCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR TCA 90 bp TTGAGTTTATTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAATGTTCTCCAAATACTaGGTCATCTTCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLFHKTTEKDTEMELFPMFSKY*VIFPPS
Trigger: TGAAGGTGGGAAGATGACTCAGTATTTGGAGAACAT...TGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAATAAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS CCA 90 bp AGCAGGGACGGGTCCCGGAGTGAGACGCCCAACACGTCGTCGAACTaGGGTTGGCCGGGGGCCGCTCCCCGCCGCGGGCCCGCAGACTCG +
Preference number: 5 (lower is better)
Translates to: SRDGSRSETPNTSSN*GWPGAAPRRGPADS
Trigger: CGAGTCTGCGGGCCCGCGGCGGGGAGCGGCCCCCGGCCAACCCCAGTTCGACGACGTGTTGGGCGTCTCACTCCGGGACCCGTCCCTGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS GCA 90 bp CCCAACAGTCTCCTGGACAGGGCGAAGGGGGCCTGGGCACTCAACTaGCAGAGACTCGGGAGCCTCCCCGCATCTGTCCCTACCCTACAA +
Preference number: 5 (lower is better)
Translates to: PNSLLDRAKGAWALN*QRLGSLPASVPTLQ
Trigger: TTGTAGGGTAGGGACAGATGCGGGGAGGCTCCCGAGTCTCTGGCAGTTGAGTGCCCAGGCCCCCTTCGCCCTGTCCAGGAGACTGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp CAAGCAGGTACAGCCGGGAGCAGTGTGAGAGGCGCGCCTGTGGGGTaGTCTGTGCACAGTGGTTGCTGGGATGCTGTCTGGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: QAGTAGSSVRGAPVG*SVHSGCWDAVWAAA
Trigger: TGCTGCAGCCCAGACAGCATCCCAGCAACCACTGTGCACAGAGCACCCCACAGGCGCGCCTCTCACACTGCTCCCGGCTGTACCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp CTGGGCTGCAGCAGCTGTCTGGGGGCTCAGCATGTCCAGGTGAGGTaGGCGGTAAGGGGTGTGGTGGCCGTAAGCAGAAGGGTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: LGCSSCLGAQHVQVR*AVRGVVAVSRRVSG
Trigger: ACCACTCACCCTTCTGCTTACGGCCACCACACCCCTTACCGCCCACCTCACCTGGACATGCTGAGCCCCCAGACAGCTGCTGCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 90 bp GACGGTGATGGTCAGGAGCAGGGACGGGTCCTGGCAGACACAATGTaGACAGAGCACCTCAGGTCTTGCCCGCCCTGGACAGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: DGDGQEQGRVLADTM*TEHLRSCPPWTGQL
Trigger: GAGCTGCCCTGTCCAGGGCGGGCAAGACCTGAGGTGCTCTGTTCACATTGTGTCTGCCAGGACCCGTCCCTGCTCCTGACCATCACCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp AGGGACGGGTCGTTCGTTCCCGGCTCTAGCCGGCCTCCGCGCCTCTaGCCTCTTTCCTTCCGGCCGTCCCGACGGAGATATTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: RDGSFVPGSSRPPRL*PLSFRPSRRRYFFN
Trigger: ATTGAAGAAATATCTCCGTCGGGACGGCCGGAAGGAAAGAGGCCAGAGGCGCGGAGGCCGGCTAGAGCCGGGAACGAACGACCCGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436351.2
CDS TCA 90 bp GAATTGCTCAGTAGGGTAGCGCCCTCTGCCGACCAGGGACCTGTATaGCAAGCAGGTACAGCCGGGAGCAGTGTGAGAGGCGCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ELLSRVAPSADQGPV*QAGTAGSSVRGAPV
Trigger: CACAGGCGCGCCTCTCACACTGCTCCCGGCTGTACCTGCTTGTCATACAGGTCCCTGGTCGGCAGAGGGCGCTACCCTACTGAGCAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 90 bp CCTCTGCAGCAATCACCCCAGGTCCCAGGCTCACTGCAGGGACCCTaGAGCCCTGCTGCTGTCTGTCAGCTGTCAGCATTGACGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PLQQSPQVPGSLQGP*SPAAVCQLSALTRK
Trigger: CTTCCTCGTCAATGCTGACAGCTGACAGACAGCAGCAGGGCTTCAGGGTCCCTGCAGTGAGCCTGGGACCTGGGGTGATTGCTGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp GTTCCCTGGACTGACTACACCGGTCAGCATACTCCTGGCCAAAGCTaGCACCACTCCAGCTGGAGTGCTCGCTGCCAACTCCCACGGCAA +
Preference number: 5 (lower is better)
Translates to: VPWTDYTGQHTPGQS*HHSSWSARCQLPRQ
Trigger: TTGCCGTGGGAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCCAGGAGTATGCTGACCGGTGTAGTCAGTCCAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp ACAGTGACCCCAGTGACGGTGATGGTCAGGAGCAGGGACGGGTCCTaGCAGACACAATGTGAACAGAGCACCTCAGGTCTTGCCCGCCCT +
Preference number: 5 (lower is better)
Translates to: TVTPVTVMVRSRDGS*QTQCEQSTSGLARP
Trigger: AGGGCGGGCAAGACCTGAGGTGCTCTGTTCACATTGTGTCTGCCAGGACCCGTCCCTGCTCCTGACCATCACCGTCACTGGGGTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 90 bp AGAGACGGCACGCACAACACTGAGCTCTCGTGCATAGAGATGGAGTaGGGGAACAGCAAGGAGGCTCAGGGGCCCAGCGAGCTGGCTAGA +
Preference number: 5 (lower is better)
Translates to: RDGTHNTELSCIEME*GNSKEAQGPSELAR
Trigger: TCTAGCCAGCTCGCTGGGCCCCTGAGCCTCCTTGCTGTTCCCTCACTCCATCTCTATGCACGAGAGCTCAGTGTTGTGCGTGCCGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp CGGTCAGCATACTCCTGGCCAAAGCTGCCACCACTCCAGCTGGAGTaGTCGCTGCCAACTCCCACGGCAAACAAGAGTTCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RSAYSWPKLPPLQLE*SLPTPTANKSSAAA
Trigger: AGCAGCAGCAGAACTCTTGTTTGCCGTGGGAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCCAGGAGTATGCTGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp GCAATCACCCCAGGTCCCAGGCTCACTGCAGGGACCCTGAAGCCCTaGTGCTGTCTGTCAGCTGTCAGCATTGACGAGGAAGGAGAACAC +
Preference number: 5 (lower is better)
Translates to: AITPGPRLTAGTLKP*CCLSAVSIDEEGEH
Trigger: GTGTTCTCCTTCCTCGTCAATGCTGACAGCTGACAGACAGCAGCAGGGCTTCAGGGTCCCTGCAGTGAGCCTGGGACCTGGGGTGATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp AAGCAGGGGCGTCGCCGAGTTGAAGACGTGTACTCCGAGCGCTCCTaGGTTCATTCATTCGCTGGGTGGAGAGAGGAAGGACAAGAGCCC +
Preference number: 5 (lower is better)
Translates to: KQGRRRVEDVYSERS*VHSFAGWREEGQEP
Trigger: GGGCTCTTGTCCTTCCTCTCTCCACCCAGCGAATGAATGAACGCAGGAGCGCTCGGAGTACACGTCTTCAACTCGGCGACGCCCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS-3UTR CAA 90 bp AGTGGTGGCGGGCCACACACCAGGATGAGCGTGGACTTCGCTGGAGGAGGAAGGCCCCTTGAGCCCTTTTaGTTAGGCCCACACCCAAAA +
Preference number: 5 (lower is better)
Translates to: SGGGPHTRMSVDFAGGGRPLEPF*LGPHPK
Trigger: TTTTGGGTGTGGGCCTAACAAAAAGGGCTCAAGGGG...CCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCCCGCCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS TCA 90 bp ACACACACACACAGGGCGGCGGGGAGTGAACTGGAGGCCATGAGATaGCTGTCTGGATGCCCTGCCATCCCAGCCATCATCCACTTACTG +
Preference number: 5 (lower is better)
Translates to: THTHRAAGSELEAMR*LSGCPAIPAIIHLL
Trigger: CAGTAAGTGGATGATGGCTGGGATGGCAGGGCATCCAGACAGTCATCTCATGGCCTCCAGTTCACTCCCCGCCGCCCTGTGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525307.1
CDS GCA 90 bp GAGAATCTAAGTGACCTTGGGGGCAGGGCACACCTGACTCATTCCTaGCTACCCGCACATTCTGGGCCTTTCCCCGACCACTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ENLSDLGGRAHLTHS*LPAHSGPFPDHWFL
Trigger: GAGGAACCAGTGGTCGGGGAAAGGCCCAGAATGTGCGGGTAGGCAGGAATGAGTCAGGTGTGCCCTGCCCCCAAGGTCACTTAGATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp TGGAAAGCCCTGCCTAGGGCATATGTGCCCTCAGAGAAAAAGCACTaGCCCTCCACCCCACCACCCTCAGTAGGCTTGGAAGCACGAGCT +
Preference number: 5 (lower is better)
Translates to: WKALPRAYVPSEKKH*PSTPPPSVGLEARA
Trigger: AGCTCGTGCTTCCAAGCCTACTGAGGGTGGTGGGGTGGAGGGGCAGTGCTTTTTCTCTGAGGGCACATATGCCCTAGGCAGGGCTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp CATACTCCTGGCCAAAGCTGCCACCACTCCAGCTGGAGTGCTCGCTaGCAACTCCCACGGCAAACAAGAGTTCTGCTGCTGCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: HTPGQSCHHSSWSAR*QLPRQTRVLLLLLK
Trigger: CTTCAGGAGCAGCAGCAGAACTCTTGTTTGCCGTGGGAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCCAGGAGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp ATCACCCCAGGTCCCAGGCTCACTGCAGGGACCCTGAAGCCCTGCTaGTGTCTGTCAGCTGTCAGCATTGACGAGGAAGGAGAACACAAC +
Preference number: 5 (lower is better)
Translates to: ITPGPRLTAGTLKPC*CLSAVSIDEEGEHN
Trigger: GTTGTGTTCTCCTTCCTCGTCAATGCTGACAGCTGACAGACAGCAGCAGGGCTTCAGGGTCCCTGCAGTGAGCCTGGGACCTGGGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp TCGGAGGGGAGCAGAATAGTAGGCACAGTTAGAGGGTCTTCACGGTaGGTTTCGGAACCTTGGCTGCCCGGCTCGCCCTTGATTACAGGC +
Preference number: 5 (lower is better)
Translates to: SEGSRIVGTVRGSSR*VSEPWLPGSPLITG
Trigger: GCCTGTAATCAAGGGCGAGCCGGGCAGCCAAGGTTCCGAAACGCACCGTGAAGACCCTCTAACTGTGCCTACTATTCTGCTCCCCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS CCA 90 bp AGGCAGCACACATGGCCTGGGGTGCTCAGGTCACTAGGCCCCTCCTaGCTACAGCCAAAGGTTCATACACTGGAAGTCCCTTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RQHTWPGVLRSLGPS*LQPKVHTLEVPSLR
Trigger: CCTCAAGGAAGGGACTTCCAGTGTATGAACCTTTGGCTGTAGCCAGGAGGGGCCTAGTGACCTGAGCACCCCAGGCCATGTGTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp TACACCGGTCAGCATACTCCTGGCCAAAGCTGCCACCACTCCAGCTaGAGTGCTCGCTGCCAACTCCCACGGCAAACAAGAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: YTGQHTPGQSCHHSS*SARCQLPRQTRVLL
Trigger: CAGCAGAACTCTTGTTTGCCGTGGGAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCCAGGAGTATGCTGACCGGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp CCAGCTGCCAGCAGCCCTGTTGATCCCACTAAGCCCTCCCACAGATaGAGGCACCCAAGCAGCATGAGCTCAGTCAATGCAGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: PAASSPVDPTKPSHR*RHPSSMSSVNAGEM
Trigger: CATTTCTCCTGCATTGACTGAGCTCATGCTGCTTGGGTGCCTGCATCTGTGGGAGGGCTTAGTGGGATCAACAGGGCTGCTGGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000534443.5
CDS CCA 90 bp AAGATGAGGGACATCCTGGTCCTGTCACTGGGGTCCTTGGTGATGTaGCGAATGAGCTGCAACATGGGTGTGATGCCTGTGCCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: KMRDILVLSLGSLVM*RMSCNMGVMPVPPA
Trigger: TGCTGGGGGCACAGGCATCACACCCATGTTGCAGCTCATTCGCCACATCACCAAGGACCCCAGTGACAGGACCAGGATGTCCCTCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000526084.1
ENST00000528585.5
ENST00000533558.5
ENST00000534443.5
CDS-3UTR CAA 90 bp AGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCGCCCGACAGGGAAAGTaGCCTCTCCTCCCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: RRTSVCAKVHGKALLKTSARQGK*PLLPPG
Trigger: ACCCGGCGGGAGGAGAGGCAACTTTCCCTGTCGGGC...GGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299498.11
CDS TCA 90 bp ACCAGTCCTCAAAGTGGTCAAGGGTTGGTGCTGACCCATGGTGAGTaGGGGCAATGGATGTCGTACCAATGGGAGGCCTGTCCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: TSPQSGQGLVLTHGE*GQWMSYQWEACPGC
Trigger: ACACCCTGGACAGGCCTCCCATTGGTACGACATCCATTGCCCTCACTCACCATGGGTCAGCACCAACCCTTGACCACTTTGAGGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 90 bp AGAGACCAGTCCTCAAAGTGGTCAAGGGTTGGTGCTGACCCATGGTaGGTGAGGGCAATGGATGTCGTACCAATGGGAGGCCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RDQSSKWSRVGADPW*VRAMDVVPMGGLSR
Trigger: CCTGGACAGGCCTCCCATTGGTACGACATCCATTGCCCTCACTCACCATGGGTCAGCACCAACCCTTGACCACTTTGAGGACTGGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp CCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTAAGGGCAGCGGGTACTaGGCTTCAGGGTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: PHPKEENQCVREGTWQGTKGSGY*ASGSCK
Trigger: CTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTT...AGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS TCA 90 bp AGCATTGACGAGGAAGGAGAACACAACGAGGTATACCGAGGTGTGTaGATCAGTACAGCCAGCTGGAGTTGTCCGGCAGGGTGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: SIDEEGEHNEVYRGV*ISTASWSCPAGCGL
Trigger: CAGGCCACACCCTGCCGGACAACTCCAGCTGGCTGTACTGATTCACACACCTCGGTATACCTCGTTGTGTTCTCCTTCCTCGTCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 90 bp CCGACCAGGGACCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCCTGGCAATTTCTTCAAGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: PTRDQWEACPGCTTG*TGLGESWQFLQALF
Trigger: GAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGTCCCTGGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS TCA 90 bp GGTCTTCACGGTGCGTTTCGGAACCTTGGCTGCCCGGCTCGCCCTTaGTTACAGGCAAAGGCAAATTCTTGCCTCAGGACAGTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: GLHGAFRNLGCPARP*LQAKANSCLRTVQL
Trigger: AAGCTGAACTGTCCTGAGGCAAGAATTTGCCTTTGCCTGTAATCAAGGGCGAGCCGGGCAGCCAAGGTTCCGAAACGCACCGTGAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS TCA 90 bp TGCAGGGACCCTGAAGCCCTGCTGCTGTCTGTCAGCTGTCAGCATTaGCGAGGAAGGAGAACACAACGAGGTATACCGAGGTGTGTGAAT +
Preference number: 5 (lower is better)
Translates to: CRDPEALLLSVSCQH*RGRRTQRGIPRCVN
Trigger: ATTCACACACCTCGGTATACCTCGTTGTGTTCTCCTTCCTCGTCAATGCTGACAGCTGACAGACAGCAGCAGGGCTTCAGGGTCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp ACTCATTCCTGCCTACCCGCACATTCTGGGCCTTTCCCCGACCACTaGTTCCTCCCATCCCTCCCAGGTGCACAATACTTTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: THSCLPAHSGPFPDH*FLPSLPGAQYFVVS
Trigger: AGAAACTACAAAGTATTGTGCACCTGGGAGGGATGGGAGGAACCAGTGGTCGGGGAAAGGCCCAGAATGTGCGGGTAGGCAGGAATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp CTGGCTGGTCCTTCAAGCCCCATCTCTAACTTGCTTCACTTCCACTaGGCTGGGACGAAGCAGCGAACTCTGAGGCCTCATATTAGACTC +
Preference number: 5 (lower is better)
Translates to: LAGPSSPISNLLHFH*AGTKQRTLRPHIRL
Trigger: GAGTCTAATATGAGGCCTCAGAGTTCGCTGCTTCGTCCCAGCCCAGTGGAAGTGAAGCAAGTTAGAGATGGGGCTTGAAGGACCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGCTGTCACTGGGGTCCTaGGTGATGTGGCGAATGAGC +
Preference number: 5 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLLSLGS*VMWRMS
Trigger: GCTCATTCGCCACATCACCAAGGACCCCAGTGACAG...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTCTGTCACTGGGGTCCTaGGTGATGTGGCGAATGAGC +
Preference number: 5 (lower is better)
Translates to: TPKRGEPVCARRYMARHFLSLGS*VMWRMS
Trigger: GCTCATTCGCCACATCACCAAGGACCCCAGTGACAG...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp CACGTGGAGGTGTTAGTAGGTGAAAATCATGTCCTGGGTATAACCCAGCTTCTCTACAGCCAGCTGGAGTaGTCCGGCAGGGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: HVEVLVGENHVLGITQLLYSQLE*SGRVWP
Trigger: AGGCCACACCCTGCCGGACAACTCCAGCTGGCTGTA...GAGAAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAACACCTCCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS TCA 90 bp ACAAAGAGACAGAGACCAGTCCTCAAAGTGGTCAAGGGTTGGTGCTaGCCCATGGTGAGTGAGGGCAATGGATGTCGTACCAATGGGAGG +
Preference number: 5 (lower is better)
Translates to: TKRQRPVLKVVKGWC*PMVSEGNGCRTNGR
Trigger: CCTCCCATTGGTACGACATCCATTGCCCTCACTCACCATGGGTCAGCACCAACCCTTGACCACTTTGAGGACTGGTCTCTGTCTCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp GATGACTGTCTGGATGCCCTGCCATCCCAGCCATCATCCACTTACTaGCTTCCACCCACAGGGCTGACCCATTACCTCTTTCTCAATCAA +
Preference number: 5 (lower is better)
Translates to: DDCLDALPSQPSSTY*LPPTGLTHYLFLNQ
Trigger: TTGATTGAGAAAGAGGTAATGGGTCAGCCCTGTGGGTGGAAGGCAGTAAGTGGATGATGGCTGGGATGGCAGGGCATCCAGACAGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525307.1
CDS CCA 90 bp ATAGTAGGCACAGTTAGAGGGTCTTCACGGTGCGTTTCGGAACCTTaGCTGCCCGGCTCGCCCTTGATTACAGGCAAAGGCAAATTCTTG +
Preference number: 5 (lower is better)
Translates to: IVGTVRGSSRCVSEP*LPGSPLITGKGKFL
Trigger: CAAGAATTTGCCTTTGCCTGTAATCAAGGGCGAGCCGGGCAGCCAAGGTTCCGAAACGCACCGTGAAGACCCTCTAACTGTGCCTACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS-3UTR CAA 90 bp GAGCCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAATCCTCCTCTGTCTGGTaGGCAAAGATGAGGGACATC +
Preference number: 5 (lower is better)
Translates to: EPFLLGPHPKEENQCVRESSSVW*AKMRDI
Trigger: GATGTCCCTCATCTTTGCCAACCAGACAGAGGAGGA...TTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTCCCCTTGAGCCCTTTTaGTTAGGCCCACACCCAAAA +
Preference number: 5 (lower is better)
Translates to: PFLLGPHPKEENQCVREGPLEPF*LGPHPK
Trigger: TTTTGGGTGTGGGCCTAACAAAAAGGGCTCAAGGGG...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS TCA 90 bp TGTACTTCCAGCCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCCTGGCAATTTCTTCAAGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: CTSSQWEACPGCTTG*TGLGESWQFLQALF
Trigger: GAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGCTGGAAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000532621.1
ENST00000533558.5
CDS TCA 90 bp CTAACTTGCTTCACTTCCACTGGGCTGGGACGAAGCAGCGAACTCTaGGGCCTCATATTAGACTCTCCCAGAGGCCTCTACATTACCTTG +
Preference number: 5 (lower is better)
Translates to: LTCFTSTGLGRSSEL*GLILDSPRGLYITL
Trigger: CAAGGTAATGTAGAGGCCTCTGGGAGAGTCTAATATGAGGCCTCAGAGTTCGCTGCTTCGTCCCAGCCCAGTGGAAGTGAAGCAAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 90 bp TGGATGTCGTACCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCCTGGCAATTTCTTCAAGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: WMSYQWEACPGCTTG*TGLGESWQFLQALF
Trigger: GAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGTACGACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 90 bp TCACAGTGGACAGGGGCAGTGTCCCTTTTGATGTTCAGTGCAGCGTaGGGTGCTGCTGATGTATTAGACACCTGCTCTCGATTGCCCTTA +
Preference number: 5 (lower is better)
Translates to: SQWTGAVSLLMFSAA*GAADVLDTCSRLPL
Trigger: TAAGGGCAATCGAGAGCAGGTGTCTAATACATCAGCAGCACCTCACGCTGCACTGAACATCAAAAGGGACACTGCCCCTGTCCACTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp GCCCTCCCACAGATGCAGGCACCCAAGCAGCATGAGCTCAGTCAATaGAGGAGAAATGAAAACAAGAGCCCAGCTCAGCAAACATTCCAT +
Preference number: 5 (lower is better)
Translates to: ALPQMQAPKQHELSQ*RRNENKSPAQQTFH
Trigger: ATGGAATGTTTGCTGAGCTGGGCTCTTGTTTTCATTTCTCCTGCATTGACTGAGCTCATGCTGCTTGGGTGCCTGCATCTGTGGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000534443.5
CDS CCA 90 bp GCCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTGAACTGGTCTaGGTGAGTCCTGGCAATTTCTTCAAGCTCTTTTCTGACCAAGAT +
Preference number: 5 (lower is better)
Translates to: ANGRPVQGVPQVELV*VSPGNFFKLFSDQD
Trigger: ATCTTGGTCAGAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000532621.1
ENST00000533558.5
CDS CCA 90 bp AGGCCCAGGAATAAAGGACTGAGCTTCAGTGAAGGGAGCAAATACTaGGGGCACAATGTTAAGAGGGGTGGGAAGAAGAGAGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: RPRNKGLSFSEGSKY*GHNVKRGGKKRAGK
Trigger: CTTCCCTGCTCTCTTCTTCCCACCCCTCTTAACATTGTGCCCCCAGTATTTGCTCCCTTCACTGAAGCTCAGTCCTTTATTCCTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGAAGGGCAGCGGGTACTaGGCTTCAGGGTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: KPRRKILKWSSFQPPSKEKGSGY*ASGSCK
Trigger: CTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTT...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGCGGAACCTCCGGGTGTaGTGGCTGATTTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLRNLRV*WLIFSF
Trigger: GAAAGAGAAAATCAGCCACAACACCCGGAGGTTCCG...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp CCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGGCCAAGGGACATGCAAAATaGCTGAGCACGTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: PRRKILKWSSFQPPSKEAKGHAK*LSTWRC
Trigger: ACACCTCCACGTGCTCAGCAATTTTGCATGTCCCTT...GGCCTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTCCCCTTGAGCCCTTTTaGTTAGGCCCACACCCAAAA +
Preference number: 5 (lower is better)
Translates to: TPKRGEPVCARRYMARHFPLEPF*LGPHPK
Trigger: TTTTGGGTGTGGGCCTAACAAAAAGGGCTCAAGGGG...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS TCA 90 bp ATGGGAGGCCTGTCCAGGGTGTACCACAGGTTGAACTGGTCTGGGTaGGTCCTGGCAATTTCTTCAAGCTCTTTTCTGACCAAGATATCC +
Preference number: 5 (lower is better)
Translates to: MGGLSRVYHRLNWSG*VLAISSSSFLTKIS
Trigger: GGATATCTTGGTCAGAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000526084.1
ENST00000532621.1
ENST00000533558.5
CDS CCA 90 bp ACCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTGAACTGGTCTaGGTGAGTCCTGGCAATTTCTTCAAGCTCTTTTCTGACCAAGAT +
Preference number: 5 (lower is better)
Translates to: TNGRPVQGVPQVELV*VSPGNFFKLFSDQD
Trigger: ATCTTGGTCAGAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524790.5
ENST00000526084.1
CDS-3UTR CAA 90 bp CCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAATCCTCCTCTGTCTGGTaGGCAAAGATGAGGGACATC +
Preference number: 5 (lower is better)
Translates to: PKEENQCVREGTWQGTFESSSVW*AKMRDI
Trigger: GATGTCCCTCATCTTTGCCAACCAGACAGAGGAGGA...TTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp CACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTAAGGGACATGCAAAATaGCTGAGCACGTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: HPKEENQCVREGTWQGTFKGHAK*LSTWRC
Trigger: ACACCTCCACGTGCTCAGCAATTTTGCATGTCCCTT...AAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAGGGACATGCAAAATaGCTGAGCACGTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLKGHAK*LSTWRC
Trigger: ACACCTCCACGTGCTCAGCAATTTTGCATGTCCCTT...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS CCA 90 bp CCTTCCTGGGTAGAATTCAATAAACCAGGTGTGGCCAGAGACCTATaGATCATGACTACATCCCACTGTCAGATGACACACTGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PSWVEFNKPGVARDL*IMTTSHCQMTHWAA
Trigger: AGCTGCCCAGTGTGTCATCTGACAGTGGGATGTAGTCATGATCCATAGGTCTCTGGCCACACCTGGTTTATTGAATTCTACCCAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp ACCCCACCACCCTCAGTAGGCTTGGAAGCACGAGCTAGCCAGATATaGTGGGCACTATTTACCTTTATAATTAGGTCCACAAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: TPPPSVGLEARASQI*WALFTFIIRSTKPL
Trigger: CAGAGGCTTTGTGGACCTAATTATAAAGGTAAATAGTGCCCACCATATCTGGCTAGCTCGTGCTTCCAAGCCTACTGAGGGTGGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp AGGACAACCCCATGTGACTCAAATCTGAGGAGTGTACGAGAACAATaGAACCATTGCAGGAATCTTCCTCCCAGCTGGGAGCCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: RTTPCDSNLRSVREQ*NHCRNLPPSWEPKY
Trigger: ATACTTGGGCTCCCAGCTGGGAGGAAGATTCCTGCAATGGTTCCATTGTTCTCGTACACTCCTCAGATTTGAGTCACATGGGGTTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000532920.1
CDS CCA 90 bp TCAGTGCCCATATTAGATGTGTATGTGATGGCTGTGTGGAATGGGTaGGTGTTCACAGTGGACAGGGGCAGTGTCCCTTTTGATGTTCAG +
Preference number: 5 (lower is better)
Translates to: SVPILDVYVMAVWNG*VFTVDRGSVPFDVQ
Trigger: CTGAACATCAAAAGGGACACTGCCCCTGTCCACTGTGAACACCCACCCATTCCACACAGCCATCACATACACATCTAATATGGGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCTGTCACTGGGGTCCTaGGTGATGTGGCGAATGAGC +
Preference number: 5 (lower is better)
Translates to: FHKTTEKDTEMELFPASKLSLGS*VMWRMS
Trigger: GCTCATTCGCCACATCACCAAGGACCCCAGTGACAG...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp TTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCATGGCAAGGCACTTTaGAAAACATCCCAGTTTACC +
Preference number: 5 (lower is better)
Translates to: LLGPHPKEENQCVREGTWHGKAL*KTSQFT
Trigger: GGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCATG...CCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGTGGAACTGCGCAGAATaGCTCAGTAGGGTAGCGCCC +
Preference number: 5 (lower is better)
Translates to: FHKTTEKDTEMELFPASKWNCAE*LSRVAP
Trigger: GGGCGCTACCCTACTGAGCAATTCTGCGCAGTTCCA...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS TCA 90 bp GAAGCTCAAACCCTTTGTTTTGTGGATGAAGTTCCTCCATGTGGATaGAGAACCTCCATGGGATGTAGGTTCCCATGGAGCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: EAQTLCFVDEVPPCG*RTSMGCRFPWSCSD
Trigger: GTCACTGCAGCTCCATGGGAACCTACATCCCATGGAGGTTCTTCATCCACATGGAGGAACTTCATCCACAAAACAAAGGGTTTGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 90 bp CCACCACCCTCAGTAGGCTTGGAAGCACGAGCTAGCCAGATATGGTaGGCACTATTTACCTTTATAATTAGGTCCACAAAGCCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: PPPSVGLEARASQIW*ALFTFIIRSTKPLS
Trigger: TGACAGAGGCTTTGTGGACCTAATTATAAAGGTAAATAGTGCCCACCATATCTGGCTAGCTCGTGCTTCCAAGCCTACTGAGGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp AAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGACGGAACCTCCGGGTGTaGTGGCTGATTTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: KTTEKDTEMELFPASKQGRNLRV*WLIFSF
Trigger: GAAAGAGAAAATCAGCCACAACACCCGGAGGTTCCG...TCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp ACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGCCCACCTTCAGGATATaGGGGGTGTACATTTTTGAA +
Preference number: 5 (lower is better)
Translates to: TQKRRTSVCAKVHGKALLPTFRI*GVYIFE
Trigger: TTCAAAAATGTACACCCCCAATATCCTGAAGGTGGG...CAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS TCA 90 bp CTACATTACCTTGTCCCACTAACTTTGCACGGCCTAGGCCAAGGCTaGGGAGATAGTGGGTCAAGGCAGTTTCTAAGCAATTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: LHYLVPLTLHGLGQG*GDSGSRQFLSNSLS
Trigger: AGATAGAGAATTGCTTAGAAACTGCCTTGACCCACTATCTCCTCAGCCTTGGCCTAGGCCGTGCAAAGTTAGTGGGACAAGGTAATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp CCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAACCCACCTTCAGGATATaGGGGGTGTACATTTTTGAA +
Preference number: 5 (lower is better)
Translates to: PKEENQCVREGTWQGTFEPTFRI*GVYIFE
Trigger: TTCAAAAATGTACACCCCCAATATCCTGAAGGTGGG...TTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp TTTCACAAAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGTCCTCCTCTGTCTGGTaGGCAAAGATGAGGGACATC +
Preference number: 5 (lower is better)
Translates to: FHKTTEKDTEMELFPASKSSSVW*AKMRDI
Trigger: GATGTCCCTCATCTTTGCCAACCAGACAGAGGAGGA...CTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTTTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp GAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTTGAAAACATCCCACATGGCAAGGCACTTTaGAAAACATCCCAGTTTACC +
Preference number: 5 (lower is better)
Translates to: ENQCVREGTWQGTFENIPHGKAL*KTSQFT
Trigger: GGTAAACTGGGATGTTTTCAAAAGTGCCTTGCCATG...TGGGATGTTTTCAAAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS-3UTR CAA 90 bp CCCTTTTTGTTAGGCCCACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTATTCATTATCGATTTTaGCCAAGAGCTGGACATAGT +
Preference number: 5 (lower is better)
Translates to: PFLLGPHPKEENQCVREGIHYRF*PRAGHS
Trigger: ACTATGTCCAGCTCTTGGCAAAAATCGATAATGAAT...ACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGTGGGCCTAACAAAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS CCA 90 bp AGAGACCTATGGATCATGACTACATCCCACTGTCAGATGACACACTaGGCAGCTACGACCTGTTGGATCCAAAATGTGAGACTCAAATTA +
Preference number: 5 (lower is better)
Translates to: RDLWIMTTSHCQMTH*AATTCWIQNVRLKL
Trigger: TAATTTGAGTCTCACATTTTGGATCCAACAGGTCGTAGCTGCCCAGTGTGTCATCTGACAGTGGGATGTAGTCATGATCCATAGGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp ACACCCAAAAGAGGAGAACCAGTGTGTGCGCGAAGGTACATGGCAAGGCACTTTATTCATTATCGATTTTaGCCAAGAGCTGGACATAGT +
Preference number: 5 (lower is better)
Translates to: TPKRGEPVCARRYMARHFIHYRF*PRAGHS
Trigger: ACTATGTCCAGCTCTTGGCAAAAATCGATAATGAAT...AAAGTGCCTTGCCATGTACCTTCGCGCACACACTGGTTCTCCTCTTTTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS CCA 90 bp TGTAGTCAGTTTACTCCCTCAGTTTCTACTCGCTCAGAAACTGAGTaGACTACATACGGGAAATTAGTCGAGACAAGGAAGATGGAACAG +
Preference number: 5 (lower is better)
Translates to: CSQFTPSVSTRSETE*TTYGKLVETRKMEQ
Trigger: CTGTTCCATCTTCCTTGTCTCGACTAATTTCCCGTATGTAGTCCACTCAGTTTCTGAGCGAGTAGAAACTGAGGGAGTAAACTGACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 90 bp AGGGAACCAAAGCCAAAAATAACCTGTCACAGCCTCAAAGATAACTaGACAGAAGACCTGGATCTTAAAACTCCTCATGATTCTCATCCC +
Preference number: 5 (lower is better)
Translates to: REPKPKITCHSLKDN*TEDLDLKTPHDSHP
Trigger: GGGATGAGAATCATGAGGAGTTTTAAGATCCAGGTCTTCTGTGCAGTTATCTTTGAGGCTGTGACAGGTTATTTTTGGCTTTGGTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp AAACCACGGAGAAAGATACTGAAATGGAGCTCTTTCCAGCCTCCAAGCAAGGAGATTCATTATCGATTTTaGCCAAGAGCTGGACATAGT +
Preference number: 5 (lower is better)
Translates to: KPRRKILKWSSFQPPSKEIHYRF*PRAGHS
Trigger: ACTATGTCCAGCTCTTGGCAAAAATCGATAATGAAT...CTCCTTGCTTGGAGGCTGGAAAGAGCTCCATTTCAGTATCTTTCTCCGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS CCA 90 bp ACCAAGTCATTCCCCTACCTTACAAAAGCTGACAACCTCATGAAGTaGGTGTGTGAATGTGTAACAAGTGTGATCATTATGCATTGTGTG +
Preference number: 5 (lower is better)
Translates to: TKSFPYLTKADNLMK*VCECVTSVIIMHCV
Trigger: CACACAATGCATAATGATCACACTTGTTACACATTCACACACCCACTTCATGAGGTTGTCAGCTTTTGTAAGGTAGGGGAATGACTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS-3UTR CAA 90 bp ACTTTTGAAAACATCCCAGTTTACCGTGGTGAAATTGAACTTACTCTGAAACAGCCCACCTTCAGGATATaGGGGGTGTACATTTTTGAA +
Preference number: 5 (lower is better)
Translates to: TFENIPVYRGEIELTLKQPTFRI*GVYIFE
Trigger: TTCAAAAATGTACACCCCCAATATCCTGAAGGTGGG...CTGTTTCAGAGTAAGTTCAATTTCACCACGGTAAACTGGGATGTTTTCAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000533558.5
CDS TCA 90 bp ATACTAAGAGCTAGAGGCAAGAGAAAGTTTTGTAACCCTAACCCTTaGCTAACTTCCTGTATGTATGTAGTCAGTTTACTCCCTCAGTTT +
Preference number: 5 (lower is better)
Translates to: ILRARGKRKFCNPNP*LTSCMYVVSLLPQF
Trigger: AAACTGAGGGAGTAAACTGACTACATACATACAGGAAGTTAGTCAAGGGTTAGGGTTACAAAACTTTCTCTTGCCTCTAGCTCTTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp GCCCGCAGACTCGTGGCGTCGCCCCGCAGCTCCGCCTaGCCGACGGGGAACCGGCCGAGACCCGGACACGCA +
Preference number: 6 (lower is better)
Translates to: ARRLVASPRSSA*PTGNRPRPGHA
Trigger: TGCGTGTCCGGGTCTCGGCCGGTTCCCCGTCGGCCAGGCGGAGCTGCGGGGCGACGCCACGAGTCTGCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533558.5
CDS GCA 72 bp CTCCTGGACAGGGCGAAGGGGGCCTGGGCACTCAACTaGCAGAGACTCGGGAGCCTCCCCGCATCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: LLDRAKGAWALN*QRLGSLPASVP
Trigger: AGGGACAGATGCGGGGAGGCTCCCGAGTCTCTGGCAGTTGAGTGCCCAGGCCCCCTTCGCCCTGTCCAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp CTCCCCAACAGTCTCCTGGACAGGGCGAAGGGGGCCTaGGCACTCAACTGCCAGAGACTCGGGAGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: LPNSLLDRAKGA*ALNCQRLGSLP
Trigger: GGGGAGGCTCCCGAGTCTCTGGCAGTTGAGTGCCCAGGCCCCCTTCGCCCTGTCCAGGAGACTGTTGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp ACAGCCGGGAGCAGTGTGAGAGGCGCGCCTGTGGGGTaGTCTGTGCACAGTGGTTGCTGGGATGCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: TAGSSVRGAPVG*SVHSGCWDAVW
Trigger: CCAGACAGCATCCCAGCAACCACTGTGCACAGAGCACCCCACAGGCGCGCCTCTCACACTGCTCCCGGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp GCCCTCTGCAGCAATCACCCCAGGTCCCAGGCTCACTaGAGGGACCCTGAAGCCCTGCTGCTGTCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: ALCSNHPRSQAH*RDPEALLLSVS
Trigger: GCTGACAGACAGCAGCAGGGCTTCAGGGTCCCTGCAGTGAGCCTGGGACCTGGGGTGATTGCTGCAGAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 90 bp GGGACGGGTCCTGGCAGACACAATGTGAACAGAGCACCTCAGGTCTaGCCCGCCCTGGACAGGGCAGCTCTCAGGCGCAGAACACCCTCC +
Preference number: 6 (lower is better)
Translates to: GTGPGRHNVNRAPQV*PALDRAALRRRTPS
Trigger: GGAGGGTGTTCTGCGCCTGAGAGCTGCCCTGTCCAGGGCGGGCAAGACCTGAGGTGCTCTGTTCACATTGTGTCTGCCAGGACCCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp TCCATAAATACACCCCGCCGCGGAACCCACCCGGAGTaGGACGCCCAACACGTCGTCGAACTGGGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SINTPRRGTHPE*DAQHVVELGLA
Trigger: GGCCAACCCCAGTTCGACGACGTGTTGGGCGTCTCACTCCGGGTGGGTTCCGCGGCGGGGTGTATTTATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436351.2
CDS TCA 72 bp CCTGGCCCCTTCCCTGCACACGCAGAGCTGCCACACTaGGCGCCCCTCAGCTTACTTAAGCTCGGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: PGPFPAHAELPH*APLSLLKLGKA
Trigger: AGCCTTGCCGAGCTTAAGTAAGCTGAGGGGCGCTCAGTGTGGCAGCTCTGCGTGTGCAGGGAAGGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531096.5
ENST00000533558.5
CDS GCA 72 bp GGTCAGGAGCAGGGACGGGTCCCTACAAGGCCGCCCTaGTCCTCTCCCAACTCAAGCCCGACAGGGAAAGTT +
Preference number: 6 (lower is better)
Translates to: GQEQGRVPTRPP*SSPNSSPTGKV
Trigger: AACTTTCCCTGTCGGGCTTGAGTTGGGAGAGGAGCAGGGCGGCCTTGTAGGGACCCGTCCCTGCTCCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299498.11
ENST00000524790.5
CDS CCA 72 bp CCCAAGCCCGGCTCACCTACAGGAAGCCCTAAGACATaGTCCGGCGAAGGCAGTCCAAAGCGGAACCTCCGG +
Preference number: 6 (lower is better)
Translates to: PKPGSPTGSPKT*SGEGSPKRNLR
Trigger: CCGGAGGTTCCGCTTTGGACTGCCTTCGCCGGACCATGTCTTAGGGCTTCCTGTAGGTGAGCCGGGCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp AGCAGCTGTCTGGGGGCTCAGCATGTCCAGGTGAGGTaGGCGGTAAGGGGTGTGGTGGCCGTAAGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: SSCLGAQHVQVR*AVRGVVAVSRR
Trigger: CCTTCTGCTTACGGCCACCACACCCCTTACCGCCCACCTCACCTGGACATGCTGAGCCCCCAGACAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp TGTGAGAGGCGCGCCTGTGGGGTGCTCTGTGCACAGTaGTTGCTGGGATGCTGTCTGGGCTGCAGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: CERRACGVLCAQ*LLGCCLGCSSC
Trigger: ACAGCTGCTGCAGCCCAGACAGCATCCCAGCAACCACTGTGCACAGAGCACCCCACAGGCGCGCCTCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp GGTCAGGAGCAGGGACGGGTCCTGGCAGACACAATGTaGACAGAGCACCTCAGGTCTTGCCCGCCCTGGACA +
Preference number: 6 (lower is better)
Translates to: GQEQGRVLADTM*TEHLRSCPPWT
Trigger: TGTCCAGGGCGGGCAAGACCTGAGGTGCTCTGTTCACATTGTGTCTGCCAGGACCCGTCCCTGCTCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp AGTAGGGTAGCGCCCTCTGCCGACCAGGGACCTGTATaGCAAGCAGGTACAGCCGGGAGCAGTGTGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SRVAPSADQGPV*QAGTAGSSVRG
Trigger: GCCTCTCACACTGCTCCCGGCTGTACCTGCTTGTCATACAGGTCCCTGGTCGGCAGAGGGCGCTACCCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp CACAGGGCGGCGGGGAGTGAACTGGAGGCCATGAGATaGCTGTCTGGATGCCCTGCCATCCCAGCCATCATC +
Preference number: 6 (lower is better)
Translates to: HRAAGSELEAMR*LSGCPAIPAII
Trigger: GATGATGGCTGGGATGGCAGGGCATCCAGACAGTCATCTCATGGCCTCCAGTTCACTCCCCGCCGCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525307.1
CDS TCA 72 bp ACACACACAGGGCGGCGGGGAGTGAACTGGAGGCCATaGGATGACTGTCTGGATGCCCTGCCATCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: THTGRRGVNWRP*DDCLDALPSQP
Trigger: TGGCTGGGATGGCAGGGCATCCAGACAGTCATCTCATGGCCTCCAGTTCACTCCCCGCCGCCCTGTGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525307.1
CDS GCA 72 bp AGTGACCTTGGGGGCAGGGCACACCTGACTCATTCCTaGCTACCCGCACATTCTGGGCCTTTCCCCGACCAC +
Preference number: 6 (lower is better)
Translates to: SDLGGRAHLTHS*LPAHSGPFPDH
Trigger: GTGGTCGGGGAAAGGCCCAGAATGTGCGGGTAGGCAGGAATGAGTCAGGTGTGCCCTGCCCCCAAGGTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp CTCTGTGCACAGTGGTTGCTGGGATGCTGTCTGGGCTaGAGCAGCTGTCTGGGGGCTCAGCATGTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LCAQWLLGCCLG*SSCLGAQHVQV
Trigger: CACCTGGACATGCTGAGCCCCCAGACAGCTGCTGCAGCCCAGACAGCATCCCAGCAACCACTGTGCACAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp AGCTGCAGGTCACACAGGAAGGATGTTTCAGGCCCCTaGAGCAGGCAGCACACATGGCCTGGGGTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SCRSHRKDVSGP*SRQHTWPGVLR
Trigger: CCTGAGCACCCCAGGCCATGTGTGCTGCCTGCTCCAGGGGCCTGAAACATCCTTCCTGTGTGACCTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp GGCCAAAGCTGCCACCACTCCAGCTGGAGTGCTCGCTaGCAACTCCCACGGCAAACAAGAGTTCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GQSCHHSSWSAR*QLPRQTRVLLL
Trigger: CAGCAGCAGAACTCTTGTTTGCCGTGGGAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp GGTCCCAGGCTCACTGCAGGGACCCTGAAGCCCTGCTaGTGTCTGTCAGCTGTCAGCATTGACGAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: GPRLTAGTLKPC*CLSAVSIDEEG
Trigger: TCCTTCCTCGTCAATGCTGACAGCTGACAGACAGCAGCAGGGCTTCAGGGTCCCTGCAGTGAGCCTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp CCCTGGTGCTCCAGTGCACAAAGTGGGAATAGAGCCTaGGCTTGGTCGGGGAATCGCCGGGCCTTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: PWCSSAQSGNRA*AWSGNRRAFCS
Trigger: AGAACAGAAGGCCCGGCGATTCCCCGACCAAGCCCAGGCTCTATTCCCACTTTGTGCACTGGAGCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp ACGCACAACACTGAGCTCTCGTGCATAGAGATGGAGTaGGGGAACAGCAAGGAGGCTCAGGGGCCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: THNTELSCIEME*GNSKEAQGPSE
Trigger: CTCGCTGGGCCCCTGAGCCTCCTTGCTGTTCCCTCACTCCATCTCTATGCACGAGAGCTCAGTGTTGTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp GCCGAGCAGGGAGCTGAGAGACGGCACGCACAACACTaGGCTCTCGTGCATAGAGATGGAGTGAGGGAACAG +
Preference number: 6 (lower is better)
Translates to: AEQGAERRHAQH*ALVHRDGVREQ
Trigger: CTGTTCCCTCACTCCATCTCTATGCACGAGAGCTCAGTGTTGTGCGTGCCGTCTCTCAGCTCCCTGCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp GGCCGCCTGCACACCCACCCTCAGCCAGGGAGGAGGTaGCAAGCTGCTCTACAAAGGCTTAGAAGTCTGTAC +
Preference number: 6 (lower is better)
Translates to: GRLHTHPQPGRR*QAALQRLRSLY
Trigger: GTACAGACTTCTAAGCCTTTGTAGAGCAGCTTGTCACCTCCTCCCTGGCTGAGGGTGGGTGTGCAGGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp GGAAGAAGAGAGCAGGGAAGGAACCCAAATATGGGATaGCCGGATCCTAGGCCTGCCCTGCCTCCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: GRREQGRNPNMG*PDPRPALPPCA
Trigger: AGCACAGGGAGGCAGGGCAGGCCTAGGATCCGGGCATCCCATATTTGGGTTCCTTCCCTGCTCTCTTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp ACTGACTACACCGGTCAGCATACTCCTGGCCAAAGCTaGCACCACTCCAGCTGGAGTGCTCGCTGCCAACTC +
Preference number: 6 (lower is better)
Translates to: TDYTGQHTPGQS*HHSSWSARCQL
Trigger: GAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCCAGGAGTATGCTGACCGGTGTAGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000532621.1
CDS CCA 72 bp CCAACTAGAAGGACCTTAGCCAAGCGCTGGCCAGGATaGCTTCACTCGGAGCTCCAGCCCTGCCTCCTACAT +
Preference number: 6 (lower is better)
Translates to: PTRRTLAKRWPG*LHSELQPCLLH
Trigger: ATGTAGGAGGCAGGGCTGGAGCTCCGAGTGAAGCCATCCTGGCCAGCGCTTGGCTAAGGTCCTTCTAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp CAGCATACTCCTGGCCAAAGCTGCCACCACTCCAGCTaGAGTGCTCGCTGCCAACTCCCACGGCAAACAAGA +
Preference number: 6 (lower is better)
Translates to: QHTPGQSCHHSS*SARCQLPRQTR
Trigger: TCTTGTTTGCCGTGGGAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCCAGGAGTATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 72 bp GGCTCCCTGGCTGGTCCTTCAAGCCCCATCTCTAACTaGCTTCACTTCCACTGGGCTGGGACGAAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: GSLAGPSSPISN*LHFHWAGTKQR
Trigger: TCGCTGCTTCGTCCCAGCCCAGTGGAAGTGAAGCAAGTTAGAGATGGGGCTTGAAGGACCAGCCAGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 90 bp GGCAAATGGGGCTCCCTGGCTGGTCCTTCAAGCCCCATCTCTAACTaGCTTCACTTCCACTGGGCTGGGACGAAGCAGCGAACTCTGAGG +
Preference number: 6 (lower is better)
Translates to: GKWGSLAGPSSPISN*LHFHWAGTKQRTLR
Trigger: CCTCAGAGTTCGCTGCTTCGTCCCAGCCCAGTGGAAGTGAAGCAAGTTAGAGATGGGGCTTGAAGGACCAGCCAGGGAGCCCCATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 90 bp CCTTGGCTGCCCGGCTCGCCCTTGATTACAGGCAAAGGCAAATTCTaGCCTCAGGACAGTTCAGCTTGGCTGGGGAGGCCTCAGGAAACT +
Preference number: 6 (lower is better)
Translates to: PWLPGSPLITGKGKF*PQDSSAWLGRPQET
Trigger: AGTTTCCTGAGGCCTCCCCAGCCAAGCTGAACTGTCCTGAGGCAAGAATTTGCCTTTGCCTGTAATCAAGGGCGAGCCGGGCAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS TCA 72 bp TTCATTCTTTTAGGCTTCCTGCCAACAGGACCTGCCTaGCAGGCCGAGCAGGGAGCTGAGAGACGGCACGCA +
Preference number: 6 (lower is better)
Translates to: FILLGFLPTGPA*QAEQGAERRHA
Trigger: TGCGTGCCGTCTCTCAGCTCCCTGCTCGGCCTGTCAGGCAGGTCCTGTTGGCAGGAAGCCTAAAAGAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp CTGTCACTGGGGTCCTTGGTGATGTGGCGAATGAGCTaGAACATGGGTGTGATGCCTGTGCCCCCAGCAATC +
Preference number: 6 (lower is better)
Translates to: LSLGSLVMWRMS*NMGVMPVPPAI
Trigger: GATTGCTGGGGGCACAGGCATCACACCCATGTTGCAGCTCATTCGCCACATCACCAAGGACCCCAGTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000526084.1
ENST00000528585.5
ENST00000533558.5
ENST00000534443.5
CDS GCA 72 bp GCTCCCTGGCTGGTCCTTCAAGCCCCATCTCTAACTTaGTTCACTTCCACTGGGCTGGGACGAAGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: APWLVLQAPSLT*FTSTGLGRSSE
Trigger: TTCGCTGCTTCGTCCCAGCCCAGTGGAAGTGAAGCAAGTTAGAGATGGGGCTTGAAGGACCAGCCAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp CTGCCTAGGGCATATGTGCCCTCAGAGAAAAAGCACTaGCCCTCCACCCCACCACCCTCAGTAGGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: LPRAYVPSEKKH*PSTPPPSVGLE
Trigger: TTCCAAGCCTACTGAGGGTGGTGGGGTGGAGGGGCAGTGCTTTTTCTCTGAGGGCACATATGCCCTAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp TACTCCTGGCCAAAGCTGCCACCACTCCAGCTGGAGTaGTCGCTGCCAACTCCCACGGCAAACAAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: YSWPKLPPLQLE*SLPTPTANKSS
Trigger: AGAACTCTTGTTTGCCGTGGGAGTTGGCAGCGAGCACTCCAGCTGGAGTGGTGGCAGCTTTGGCCAGGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp AGCAGAATAGTAGGCACAGTTAGAGGGTCTTCACGGTaGGTTTCGGAACCTTGGCTGCCCGGCTCGCCCTTG +
Preference number: 6 (lower is better)
Translates to: SRIVGTVRGSSR*VSEPWLPGSPL
Trigger: CAAGGGCGAGCCGGGCAGCCAAGGTTCCGAAACGCACCGTGAAGACCCTCTAACTGTGCCTACTATTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS GCA 72 bp CGTCGCCGAGTTGAAGACGTGTACTCCGAGCGCTCCTaGGTTCATTCATTCGCTGGGTGGAGAGAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: RRRVEDVYSERS*VHSFAGWREEG
Trigger: TCCTTCCTCTCTCCACCCAGCGAATGAATGAACGCAGGAGCGCTCGGAGTACACGTCTTCAACTCGGCGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS CCA 72 bp ACATGGCCTGGGGTGCTCAGGTCACTAGGCCCCTCCTaGCTACAGCCAAAGGTTCATACACTGGAAGTCCCT +
Preference number: 6 (lower is better)
Translates to: TWPGVLRSLGPS*LQPKVHTLEVP
Trigger: AGGGACTTCCAGTGTATGAACCTTTGGCTGTAGCCAGGAGGGGCCTAGTGACCTGAGCACCCCAGGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp CCAGTGACGGTGATGGTCAGGAGCAGGGACGGGTCCTaGCAGACACAATGTGAACAGAGCACCTCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: PVTVMVRSRDGS*QTQCEQSTSGL
Trigger: AAGACCTGAGGTGCTCTGTTCACATTGTGTCTGCCAGGACCCGTCCCTGCTCCTGACCATCACCGTCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp TGCCTACCCGCACATTCTGGGCCTTTCCCCGACCACTaGTTCCTCCCATCCCTCCCAGGTGCACAATACTTT +
Preference number: 6 (lower is better)
Translates to: CLPAHSGPFPDH*FLPSLPGAQYF
Trigger: AAAGTATTGTGCACCTGGGAGGGATGGGAGGAACCAGTGGTCGGGGAAAGGCCCAGAATGTGCGGGTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp TGCTCCAGTGCACAAAGTGGGAATAGAGCCTGGGCTTaGTCGGGGAATCGCCGGGCCTTCTGTTCTGAGGAA +
Preference number: 6 (lower is better)
Translates to: CSSAQSGNRAWA*SGNRRAFCSEE
Trigger: TTCCTCAGAACAGAAGGCCCGGCGATTCCCCGACCAAGCCCAGGCTCTATTCCCACTTTGTGCACTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp ACAGTTAGAGGGTCTTCACGGTGCGTTTCGGAACCTTaGCTGCCCGGCTCGCCCTTGATTACAGGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: TVRGSSRCVSEP*LPGSPLITGKG
Trigger: GCCTTTGCCTGTAATCAAGGGCGAGCCGGGCAGCCAAGGTTCCGAAACGCACCGTGAAGACCCTCTAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS CAA 72 bp CCCGGCTCGCCCTTGATTACAGGCAAAGGCAAATTCTaGCCTCAGGACAGTTCAGCTTGGCTGGGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: PGSPLITGKGKF*PQDSSAWLGRP
Trigger: AGGCCTCCCCAGCCAAGCTGAACTGTCCTGAGGCAAGAATTTGCCTTTGCCTGTAATCAAGGGCGAGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS CAA 72 bp CGGTGCGTTTCGGAACCTTGGCTGCCCGGCTCGCCCTaGATTACAGGCAAAGGCAAATTCTTGCCTCAGGAC +
Preference number: 6 (lower is better)
Translates to: RCVSEPWLPGSP*ITGKGKFLPQD
Trigger: GTCCTGAGGCAAGAATTTGCCTTTGCCTGTAATCAAGGGCGAGCCGGGCAGCCAAGGTTCCGAAACGCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS CAA 90 bp GGGTCTTCACGGTGCGTTTCGGAACCTTGGCTGCCCGGCTCGCCCTaGATTACAGGCAAAGGCAAATTCTTGCCTCAGGACAGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: GSSRCVSEPWLPGSP*ITGKGKFLPQDSSA
Trigger: AGCTGAACTGTCCTGAGGCAAGAATTTGCCTTTGCCTGTAATCAAGGGCGAGCCGGGCAGCCAAGGTTCCGAAACGCACCGTGAAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS TCA 72 bp CGCAGAACACCCTCCCCACACCAAAGGCACAGGAGCTaGGCTCTGCCTGCAGGAAATAGGCAAAGAGAACAG +
Preference number: 6 (lower is better)
Translates to: RRTPSPHQRHRS*ALPAGNRQREQ
Trigger: CTGTTCTCTTTGCCTATTTCCTGCAGGCAGAGCTCAGCTCCTGTGCCTTTGGTGTGGGGAGGGTGTTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp CTAGAGGGGCTGGTCCCTGAAGCTGATTCAAGGGGATaGGCCAAGTCTTTGAGGTGCCAACACTCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: LEGLVPEADSRG*AKSLRCQHSGL
Trigger: GAGCCCAGAGTGTTGGCACCTCAAAGACTTGGCTCATCCCCTTGAATCAGCTTCAGGGACCAGCCCCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp GACATCCTGGTCCTGTCACTGGGGTCCTTGGTGATGTaGCGAATGAGCTGCAACATGGGTGTGATGCCTGTG +
Preference number: 6 (lower is better)
Translates to: DILVLSLGSLVM*RMSCNMGVMPV
Trigger: CACAGGCATCACACCCATGTTGCAGCTCATTCGCCACATCACCAAGGACCCCAGTGACAGGACCAGGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000526084.1
ENST00000528585.5
ENST00000533558.5
ENST00000534443.5
CDS CAA 90 bp TGGTTGGCAAAGATGAGGGACATCCTGGTCCTGTCACTGGGGTCCTaGGTGATGTGGCGAATGAGCTGCAACATGGGTGTGATGCCTGTG +
Preference number: 6 (lower is better)
Translates to: WLAKMRDILVLSLGS*VMWRMSCNMGVMPV
Trigger: CACAGGCATCACACCCATGTTGCAGCTCATTCGCCACATCACCAAGGACCCCAGTGACAGGACCAGGATGTCCCTCATCTTTGCCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000526084.1
ENST00000528585.5
ENST00000533558.5
ENST00000534443.5
CDS TCA 72 bp TTCACTTCCACTGGGCTGGGACGAAGCAGCGAACTCTaGGGCCTCATATTAGACTCTCCCAGAGGCCTCTAC +
Preference number: 6 (lower is better)
Translates to: FTSTGLGRSSEL*GLILDSPRGLY
Trigger: GTAGAGGCCTCTGGGAGAGTCTAATATGAGGCCTCAGAGTTCGCTGCTTCGTCCCAGCCCAGTGGAAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp TCCTCAAAGTGGTCAAGGGTTGGTGCTGACCCATGGTaGGTGAGGGCAATGGATGTCGTACCAATGGGAGGC +
Preference number: 6 (lower is better)
Translates to: SSKWSRVGADPW*VRAMDVVPMGG
Trigger: GCCTCCCATTGGTACGACATCCATTGCCCTCACTCACCATGGGTCAGCACCAACCCTTGACCACTTTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp CAGAGACCAGTCCTCAAAGTGGTCAAGGGTTGGTGCTaGCCCATGGTGAGTGAGGGCAATGGATGTCGTACC +
Preference number: 6 (lower is better)
Translates to: QRPVLKVVKGWC*PMVSEGNGCRT
Trigger: GGTACGACATCCATTGCCCTCACTCACCATGGGTCAGCACCAACCCTTGACCACTTTGAGGACTGGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp GAGGAAGGAGAACACAACGAGGTATACCGAGGTGTGTaGATCAGTACAGCCAGCTGGAGTTGTCCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: EEGEHNEVYRGV*ISTASWSCPAG
Trigger: CCCTGCCGGACAACTCCAGCTGGCTGTACTGATTCACACACCTCGGTATACCTCGTTGTGTTCTCCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp AGCCATCATCCACTTACTGCCTTCCACCCACAGGGCTaGCCCATTACCTCTTTCTCAATCAAGGGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: SHHPLTAFHPQG*PITSFSIKGSG
Trigger: CCCGCTGCCCTTGATTGAGAAAGAGGTAATGGGTCAGCCCTGTGGGTGGAAGGCAGTAAGTGGATGATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525307.1
CDS CCA 72 bp CCTTCAAGCCCCATCTCTAACTTGCTTCACTTCCACTaGGCTGGGACGAAGCAGCGAACTCTGAGGCCTCAT +
Preference number: 6 (lower is better)
Translates to: PSSPISNLLHFH*AGTKQRTLRPH
Trigger: ATGAGGCCTCAGAGTTCGCTGCTTCGTCCCAGCCCAGTGGAAGTGAAGCAAGTTAGAGATGGGGCTTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 72 bp AAGATGAGGGACATCCTGGTCCTGTCACTGGGGTCCTaGGTGATGTGGCGAATGAGCTGCAACATGGGTGTG +
Preference number: 6 (lower is better)
Translates to: KMRDILVLSLGS*VMWRMSCNMGV
Trigger: CACACCCATGTTGCAGCTCATTCGCCACATCACCAAGGACCCCAGTGACAGGACCAGGATGTCCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299498.11
ENST00000524790.5
ENST00000526084.1
ENST00000528585.5
ENST00000533558.5
ENST00000534443.5
CDS TCA 72 bp AGCCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCCTGGCAATTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: SQWEACPGCTTG*TGLGESWQFLQ
Trigger: TTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299498.11
ENST00000532621.1
ENST00000533558.5
CDS TCA 72 bp GTGGGTGTTCACAGTGGACAGGGGCAGTGTCCCTTTTaGTGTTCAGTGCAGCGTGAGGTGCTGCTGATGTAT +
Preference number: 6 (lower is better)
Translates to: VGVHSGQGQCPF*CSVQREVLLMY
Trigger: ATACATCAGCAGCACCTCACGCTGCACTGAACATCAAAAGGGACACTGCCCCTGTCCACTGTGAACACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp GACCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCCTGGCAATTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: DQWEACPGCTTG*TGLGESWQFLQ
Trigger: TTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524790.5
CDS CAA 72 bp ATCCTACCACTGCAAGCTCAGCAGGAACTGACCTGGTaGGCAAAGATGAGGGACATCCTGGTCCTGTCACTG +
Preference number: 6 (lower is better)
Translates to: ILPLQAQQELTW*AKMRDILVLSL
Trigger: CAGTGACAGGACCAGGATGTCCCTCATCTTTGCCAACCAGGTCAGTTCCTGCTGAGCTTGCAGTGGTAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000534443.5
CDS CAA 90 bp AAACATTCCATCCTACCACTGCAAGCTCAGCAGGAACTGACCTGGTaGGCAAAGATGAGGGACATCCTGGTCCTGTCACTGGGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: KHSILPLQAQQELTW*AKMRDILVLSLGSL
Trigger: CAAGGACCCCAGTGACAGGACCAGGATGTCCCTCATCTTTGCCAACCAGGTCAGTTCCTGCTGAGCTTGCAGTGGTAGGATGGAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000534443.5
CDS TCA 72 bp CCAAAGGTTCATACACTGGAAGTCCCTTCCTTGAGGTaGAGGGGGAGGACATCACCCCTAACACACAATCCG +
Preference number: 6 (lower is better)
Translates to: PKVHTLEVPSLR*RGRTSPLTHNP
Trigger: CGGATTGTGTGTTAGGGGTGATGTCCTCCCCCTTCACCTCAAGGAAGGGACTTCCAGTGTATGAACCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp TCCCTGAAGCTGATTCAAGGGGATGAGCCAAGTCTTTaGGGTGCCAACACTCTGGGCTCAGAACAGGCTCAA +
Preference number: 6 (lower is better)
Translates to: SLKLIQGDEPSL*GANTLGSEQAQ
Trigger: TTGAGCCTGTTCTGAGCCCAGAGTGTTGGCACCTCAAAGACTTGGCTCATCCCCTTGAATCAGCTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp TACCAATGGGAGGCCTGTCCAGGGTGTACCACAGGTTaGACTGGTCTGGGTGAGTCCTGGCAATTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: YQWEACPGCTTG*TGLGESWQFLQ
Trigger: TTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTGTGGTACACCCTGGACAGGCCTCCCATTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp AAGGGGATGAGCCAAGTCTTTGAGGTGCCAACACTCTaGGCTCAGAACAGGCTCAATGACTCTGGTCATGGT +
Preference number: 6 (lower is better)
Translates to: KGMSQVFEVPTL*AQNRLNDSGHG
Trigger: ACCATGACCAGAGTCATTGAGCCTGTTCTGAGCCCAGAGTGTTGGCACCTCAAAGACTTGGCTCATCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 72 bp CCCATTACCTCTTTCTCAATCAAGGGCAGCGGGTACTaGGCTTCAGGGTCCTGTAAGGTGATTGGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: PITSFSIKGSGY*ASGSCKVIGSL
Trigger: GAGAGAGCCAATCACCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTTGATTGAGAAAGAGGTAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525307.1
CDS CAA 90 bp GTGTTGTGGCTGATTTTCTCTTTCTCAATCAAGGGCAGCGGGTACTaGGCTTCAGGGTCCTGTAAGGTGATTGGCTCTCTCCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: VLWLIFSFSIKGSGY*ASGSCKVIGSLLLE
Trigger: CTCCAGGAGGAGAGAGCCAATCACCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTTGATTGAGAAAGAGAAAATCAGCCACAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299498.11
ENST00000436351.2
ENST00000524608.5
ENST00000524790.5
ENST00000526084.1
ENST00000527542.5
ENST00000531096.5
ENST00000533558.5
ENST00000534443.5
CDS TCA 72 bp CTTGTCCCACTAACTTTGCACGGCCTAGGCCAAGGCTaGGGAGATAGTGGGTCAAGGCAGTTTCTAAGCAAT +
Preference number: 6 (lower is better)
Translates to: LVPLTLHGLGQG*GDSGSRQFLSN
Trigger: ATTGCTTAGAAACTGCCTTGACCCACTATCTCCTCAGCCTTGGCCTAGGCCGTGCAAAGTTAGTGGGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp CAGATGCAGGCACCCAAGCAGCATGAGCTCAGTCAATaGAGGAGAAATGAAAACAAGAGCCCAGCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: QMQAPKQHELSQ*RRNENKSPAQQ
Trigger: TTGCTGAGCTGGGCTCTTGTTTTCATTTCTCCTGCATTGACTGAGCTCATGCTGCTTGGGTGCCTGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000534443.5
CDS GCA 72 bp CACAAGGTTAACTGTAGCTTCACTGCTGGAAAGCCCTaGCTAGGGCATATGTGCCCTCAGAGAAAAAGCACT +
Preference number: 6 (lower is better)
Translates to: HKVNCSFTAGKP*LGHMCPQRKST
Trigger: AGTGCTTTTTCTCTGAGGGCACATATGCCCTAGGCAGGGCTTTCCAGCAGTGAAGCTACAGTTAACCTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp TTTCACAACAACCCAAGTGAGGTAGACAGGCAGGCCTaGGAAATCCCATTTCATAGACTGAGGCTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: FHNNPSEVDRQA*EIPFHRLRLRE
Trigger: CTCTCTGAGCCTCAGTCTATGAAATGGGATTTCCCAGGCCTGCCTGTCTACCTCACTTGGGTTGTTGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp CCATGTGACTCAAATCTGAGGAGTGTACGAGAACAATaGAACCATTGCAGGAATCTTCCTCCCAGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: PCDSNLRSVREQ*NHCRNLPPSWE
Trigger: CTCCCAGCTGGGAGGAAGATTCCTGCAATGGTTCCATTGTTCTCGTACACTCCTCAGATTTGAGTCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000532920.1
CDS CAA 72 bp CTGATTTTCTCTTTCTCAATCAAGGGCAGCGGGTACTaGGCTTCAGGGTCCTGTAAGGTGATTGGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LIFSFSIKGSGY*ASGSCKVIGSL
Trigger: GAGAGAGCCAATCACCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTTGATTGAGAAAGAGAAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299498.11
ENST00000436351.2
ENST00000524608.5
ENST00000524790.5
ENST00000526084.1
ENST00000527542.5
ENST00000531096.5
ENST00000533558.5
ENST00000534443.5
CDS CAA 72 bp CTCAAATCTGAGGAGTGTACGAGAACAATGGAACCATaGCAGGAATCTTCCTCCCAGCTGGGAGCCCAAGTA +
Preference number: 6 (lower is better)
Translates to: LKSEECTRTMEP*QESSSQLGAQV
Trigger: TACTTGGGCTCCCAGCTGGGAGGAAGATTCCTGCAATGGTTCCATTGTTCTCGTACACTCCTCAGATTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000532920.1
CDS TCA 72 bp TACAGGGCCCTAGGATTTGGGTACCCATGGAGCAAATaGAACAACAATATCATGTCTTCCTGGCCTATGGCC +
Preference number: 6 (lower is better)
Translates to: YRALGFGYPWSK*NNNIMSSWPMA
Trigger: GGCCATAGGCCAGGAAGACATGATATTGTTGTTTCATTTGCTCCATGGGTACCCAAATCCTAGGGCCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp ACCCTTTGTTTTGTGGATGAAGTTCCTCCATGTGGATaGAGAACCTCCATGGGATGTAGGTTCCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: TLCFVDEVPPCG*RTSMGCRFPWS
Trigger: GCTCCATGGGAACCTACATCCCATGGAGGTTCTTCATCCACATGGAGGAACTTCATCCACAAAACAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp GTCCCTTTTGATGTTCAGTGCAGCGTGAGGTGCTGCTaGTGTATTAGACACCTGCTCTCGATTGCCCTTAAA +
Preference number: 6 (lower is better)
Translates to: VPFDVQCSVRCC*CIRHLLSIALK
Trigger: TTTAAGGGCAATCGAGAGCAGGTGTCTAATACATCAGCAGCACCTCACGCTGCACTGAACATCAAAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp TCAAATCTGAGGAGTGTACGAGAACAATGGAACCATTaGAGGAATCTTCCTCCCAGCTGGGAGCCCAAGTAT +
Preference number: 6 (lower is better)
Translates to: SNLRSVREQWNH*RNLPPSWEPKY
Trigger: ATACTTGGGCTCCCAGCTGGGAGGAAGATTCCTGCAATGGTTCCATTGTTCTCGTACACTCCTCAGATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000532920.1
CDS CCA 72 bp TGGATCATGACTACATCCCACTGTCAGATGACACACTaGGCAGCTACGACCTGTTGGATCCAAAATGTGAGA +
Preference number: 6 (lower is better)
Translates to: WIMTTSHCQMTH*AATTCWIQNVR
Trigger: TCTCACATTTTGGATCCAACAGGTCGTAGCTGCCCAGTGTGTCATCTGACAGTGGGATGTAGTCATGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp GGCCTGGGCTCACAGATACTACAGGGCCCTAGGATTTaGGTACCCATGGAGCAAATGAAACAACAATATCAT +
Preference number: 6 (lower is better)
Translates to: GLGSQILQGPRI*VPMEQMKQQYH
Trigger: ATGATATTGTTGTTTCATTTGCTCCATGGGTACCCAAATCCTAGGGCCCTGTAGTATCTGTGAGCCCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp AAGGCAAATTCTTGCCTCAGGACAGTTCAGCTTGGCTaGGGAGGCCTCAGGAAACTTATAAAATCATGGCGA +
Preference number: 6 (lower is better)
Translates to: KANSCLRTVQLG*GGLRKLIKSWR
Trigger: TCGCCATGATTTTATAAGTTTCCTGAGGCCTCCCCAGCCAAGCTGAACTGTCCTGAGGCAAGAATTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524608.5
CDS CAA 90 bp GACTACATCCCACTGTCAGATGACACACTGGGCAGCTACGACCTGTaGGATCCAAAATGTGAGACTCAAATTACTAAGGCAATTAGTGGC +
Preference number: 6 (lower is better)
Translates to: DYIPLSDDTLGSYDL*DPKCETQITKAISG
Trigger: GCCACTAATTGCCTTAGTAATTTGAGTCTCACATTTTGGATCCAACAGGTCGTAGCTGCCCAGTGTGTCATCTGACAGTGGGATGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp CTCTGTCATCATCACTGGAGACAGGGGTGTAAGCCCTaGCCACCAATTCATTATCGATTTTTGCCAAGAGCT +
Preference number: 6 (lower is better)
Translates to: LCHHHWRQGCKP*PPIHYRFLPRA
Trigger: AGCTCTTGGCAAAAATCGATAATGAATTGGTGGTCAGGGCTTACACCCCTGTCTCCAGTGATGATGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000299498.11
ENST00000436351.2
ENST00000524608.5
ENST00000524790.5
ENST00000526084.1
ENST00000527542.5
ENST00000531096.5
ENST00000532920.1
ENST00000533558.5
ENST00000534443.5
CDS TCA 72 bp TATCCATCAGTCACTCTACTTTCACAACAACCCAAGTaGGGTAGACAGGCAGGCCTGGGAAATCCCATTTCA +
Preference number: 6 (lower is better)
Translates to: YPSVTLLSQQPK*GRQAGLGNPIS
Trigger: TGAAATGGGATTTCCCAGGCCTGCCTGTCTACCTCACTTGGGTTGTTGTGAAAGTAGAGTGACTGATGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp AATAAAGGACTGAGCTTCAGTGAAGGGAGCAAATACTaGGGGCACAATGTTAAGAGGGGTGGGAAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: NKGLSFSEGSKY*GHNVKRGGKKR
Trigger: TCTCTTCTTCCCACCCCTCTTAACATTGTGCCCCCAGTATTTGCTCCCTTCACTGAAGCTCAGTCCTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp CCCTCAGTAGGCTTGGAAGCACGAGCTAGCCAGATATaGTGGGCACTATTTACCTTTATAATTAGGTCCACA +
Preference number: 6 (lower is better)
Translates to: PSVGLEARASQI*WALFTFIIRST
Trigger: TGTGGACCTAATTATAAAGGTAAATAGTGCCCACCATATCTGGCTAGCTCGTGCTTCCAAGCCTACTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 72 bp GTTCTGCTGCTGCTCCTGAAGCTCAAACCCTTTGTTTaGTGGATGAAGTTCCTCCATGTGGATGAAGAACCT +
Preference number: 6 (lower is better)
Translates to: VLLLLLKLKPFV*WMKFLHVDEEP
Trigger: AGGTTCTTCATCCACATGGAGGAACTTCATCCACAAAACAAAGGGTTTGAGCTTCAGGAGCAGCAGCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS GCA 72 bp TTTAGGCCTTTTGGCTCTAGGTTCAGTTCTTTTCAATaGTCACTGAGGTACCACTCTCGTGTCAGCCCAATT +
Preference number: 6 (lower is better)
Translates to: FRPFGSRFSSFQ*SLRYHSRVSPI
Trigger: AATTGGGCTGACACGAGAGTGGTACCTCAGTGAGCATTGAAAAGAACTGAACCTAGAGCCAAAAGGCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp GTAGAATTCAATAAACCAGGTGTGGCCAGAGACCTATaGATCATGACTACATCCCACTGTCAGATGACACAC +
Preference number: 6 (lower is better)
Translates to: VEFNKPGVARDL*IMTTSHCQMTH
Trigger: GTGTGTCATCTGACAGTGGGATGTAGTCATGATCCATAGGTCTCTGGCCACACCTGGTTTATTGAATTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp CCTGTCACAGCCTCAAAGATAACTGCACAGAAGACCTaGATCTTAAAACTCCTCATGATTCTCATCCCAGTC +
Preference number: 6 (lower is better)
Translates to: PVTASKITAQKT*ILKLLMILIPV
Trigger: GACTGGGATGAGAATCATGAGGAGTTTTAAGATCCAGGTCTTCTGTGCAGTTATCTTTGAGGCTGTGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp TCAGTTTACTCCCTCAGTTTCTACTCGCTCAGAAACTaGGTGGACTACATACGGGAAATTAGTCGAGACAAG +
Preference number: 6 (lower is better)
Translates to: SVYSLSFYSLRN*VDYIREISRDK
Trigger: CTTGTCTCGACTAATTTCCCGTATGTAGTCCACTCAGTTTCTGAGCGAGTAGAAACTGAGGGAGTAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS TCA 72 bp CTGGGTGAGTCCTGGCAATTTCTTCAAGCTCTTTTCTaGCCAAGATATCCTCCTCTGTCTAGAAAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: LGESWQFLQALF*PRYPPLSRKEA
Trigger: TGCTTCTTTTCTAGACAGAGGAGGATATCTTGGTCAGAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526084.1
ENST00000532621.1
CDS CCA 72 bp TTTACTCCCTCAGTTTCTACTCGCTCAGAAACTGAGTaGACTACATACGGGAAATTAGTCGAGACAAGGAAG +
Preference number: 6 (lower is better)
Translates to: FTPSVSTRSETE*TTYGKLVETRK
Trigger: CTTCCTTGTCTCGACTAATTTCCCGTATGTAGTCCACTCAGTTTCTGAGCGAGTAGAAACTGAGGGAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp TCAGTAGGCTTGGAAGCACGAGCTAGCCAGATATGGTaGGCACTATTTACCTTTATAATTAGGTCCACAAAG +
Preference number: 6 (lower is better)
Translates to: SVGLEARASQIW*ALFTFIIRSTK
Trigger: CTTTGTGGACCTAATTATAAAGGTAAATAGTGCCCACCATATCTGGCTAGCTCGTGCTTCCAAGCCTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CAA 90 bp ATTTACTGCTGGAAGCTTTGCAGAGAAAGTGTTCTCCTCTCTGAATaGTTGTACGCAATCCCTGAAGATGAAGCTGCCACAAGGTTAACT +
Preference number: 6 (lower is better)
Translates to: IYCWKLCRESVLLSE*LYAIPEDEAATRLT
Trigger: AGTTAACCTTGTGGCAGCTTCATCTTCAGGGATTGCGTACAACAATTCAGAGAGGAGAACACTTTCTCTGCAAAGCTTCCAGCAGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526084.1
CDS CCA 72 bp TTCCCCTACCTTACAAAAGCTGACAACCTCATGAAGTaGGTGTGTGAATGTGTAACAAGTGTGATCATTATG +
Preference number: 6 (lower is better)
Translates to: FPYLTKADNLMK*VCECVTSVIIM
Trigger: CATAATGATCACACTTGTTACACATTCACACACCCACTTCATGAGGTTGTCAGCTTTTGTAAGGTAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526084.1